0.017169
0.000000
0.000000
0.000000
0.017169
0.000000
0.000000
0.000000
0.006312
0.000000
0.000000
0.000000
Liang, Y.-H.
Li, J.
Das, R.
Byrd, R.A.
0000-0001-6942-1514
Ji, X.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
58.246
58.246
158.431
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C2 O4 -2
88.019
OXALATE ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
C
N
251
N
C
N
252
N
O
N
253
N
O
N
254
N
O
N
255
N
O
N
256
N
N
N
257
S
C
N
258
N
C
N
259
N
O
N
260
N
C
Y
261
N
C
Y
262
N
C
Y
263
N
C
Y
264
N
C
Y
265
N
C
Y
266
N
C
N
267
N
O
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
N
N
280
S
C
N
281
N
C
N
282
N
O
N
283
N
C
N
284
N
C
N
285
N
C
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
N
N
297
S
C
N
298
N
C
N
299
N
O
N
300
N
C
N
301
N
O
N
302
N
O
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
R
C
N
315
N
O
N
316
N
C
N
317
N
O
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
N
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
C
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
N
N
355
S
C
N
356
N
C
N
357
N
O
N
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
N
365
N
O
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
N
N
379
S
C
N
380
N
C
N
381
N
O
N
382
N
C
N
383
N
C
N
384
N
C
N
385
N
O
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
doub
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
doub
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
Y
253
N
doub
Y
254
N
sing
Y
255
N
sing
N
256
N
sing
Y
257
N
doub
N
258
N
sing
Y
259
N
doub
N
260
N
sing
Y
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
doub
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
doub
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
Y
322
N
doub
Y
323
N
sing
Y
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
Y
328
N
sing
N
329
N
sing
Y
330
N
sing
Y
331
N
doub
N
332
N
sing
Y
333
N
doub
N
334
N
sing
Y
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
Y
350
N
doub
Y
351
N
sing
Y
352
N
sing
N
353
N
sing
Y
354
N
doub
N
355
N
sing
Y
356
N
doub
N
357
N
sing
Y
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
UK
Embo J.
EMJODG
0897
0261-4189
32
2504
2516
10.1038/emboj.2013.174
23942235
Allosteric regulation of E2:E3 interactions promote a processive ubiquitination machine.
2013
0000-0001-6942-1514
10.2210/pdb4lad/pdb
pdb_00004lad
100
1
CCD
2009-11-04
MARMOSAIC 300 mm CCD
SINGLE WAVELENGTH
M
x-ray
1
1.000
1.0
22-ID
APS
1.000
SYNCHROTRON
APS BEAMLINE 22-ID
18582.262
Ubiquitin-conjugating enzyme E2 G2
6.3.2.19
1
man
polymer
15471.062
E3 ubiquitin-protein ligase AMFR
6.3.2.-
RING region (UNP residues 313-393) and G2BR region (UNP residues 574-600)
40 a.a. insertion
1
man
polymer
65.409
ZINC ION
2
syn
non-polymer
88.019
OXALATE ION
2
syn
non-polymer
18.015
water
39
nat
water
Ubiquitin carrier protein G2, Ubiquitin-protein ligase G2
Autocrine motility factor receptor, AMF receptor, RING finger protein 45, gp78
no
no
MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP
NIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQ
KSLGL
MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP
NIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQ
KSLGL
A
polypeptide(L)
no
no
HMKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRV
REEGGGGGGGSSGSSGGSGGGSGSSSGGGGGSGGGSGGGGGGGSADERQRMLVQRKDELLQQARKRFLNK
HMKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRV
REEGGGGGGGSSGSSGGSGGGSGSSSGGGGGSGGGSGGGGGGGSADERQRMLVQRKDELLQQARKRFLNK
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
UBE2G2, Ubiquitin-conjugating enzyme E2G2 isoform 1
9606
Homo sapiens
511693
Escherichia coli
BL21(star)
plasmid
pGEX
human
sample
3
83
AMFR, Autocrine motility factor receptor, RNF45
9606
Homo sapiens
511693
Escherichia coli
BL21(star)
plasmid
pET3a
human
sample
124
150
AMFR, Autocrine motility factor receptor, RNF45
9606
Homo sapiens
511693
Escherichia coli
BL21(star)
plasmid
pET3a
1
1.97
37.66
VAPOR DIFFUSION, SITTING DROP
8.5
25% PEG-3350, 0.1M Tris-HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
entity_src_gen
software
software
audit_author
chem_comp_atom
chem_comp_bond
citation_author
database_2
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
pdbx_initial_refinement_model
repository
Initial release
Database references
Refinement description
Source and taxonomy
Refinement description
Data collection
Database references
Derived calculations
Structure summary
Refinement description
1
0
2013-08-28
1
1
2013-09-25
1
2
2017-08-02
1
3
2017-11-15
1
4
2023-08-30
1
5
2023-09-20
_audit_author.identifier_ORCID
_citation_author.identifier_ORCID
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
NMR solution structure of the gp78 RING
NMR-based docking model of the Ube2g2:RING:G2BR complex
RCSB
Y
RCSB
2013-06-19
REL
REL
ZN
ZINC ION
OXL
OXALATE ION
HOH
water
3H8K
PDB ENTRY 3H8K
PDB
experimental model
ZN
1
3
ZN
ZN
701
B
ZN
2
3
ZN
ZN
702
B
OXL
1
4
OXL
OXL
703
B
OXL
2
4
OXL
OXL
704
B
HOH
1
5
HOH
HOH
201
A
HOH
2
5
HOH
HOH
202
A
HOH
4
5
HOH
HOH
203
A
HOH
5
5
HOH
HOH
204
A
HOH
6
5
HOH
HOH
205
A
HOH
7
5
HOH
HOH
206
A
HOH
8
5
HOH
HOH
207
A
HOH
9
5
HOH
HOH
208
A
HOH
10
5
HOH
HOH
209
A
HOH
11
5
HOH
HOH
210
A
HOH
12
5
HOH
HOH
211
A
HOH
13
5
HOH
HOH
212
A
HOH
16
5
HOH
HOH
213
A
HOH
18
5
HOH
HOH
214
A
HOH
19
5
HOH
HOH
215
A
HOH
20
5
HOH
HOH
216
A
HOH
21
5
HOH
HOH
217
A
HOH
23
5
HOH
HOH
218
A
HOH
24
5
HOH
HOH
219
A
HOH
25
5
HOH
HOH
220
A
HOH
26
5
HOH
HOH
221
A
HOH
27
5
HOH
HOH
222
A
HOH
28
5
HOH
HOH
223
A
HOH
30
5
HOH
HOH
224
A
HOH
34
5
HOH
HOH
225
A
HOH
37
5
HOH
HOH
226
A
HOH
3
5
HOH
HOH
801
B
HOH
14
5
HOH
HOH
802
B
HOH
15
5
HOH
HOH
803
B
HOH
17
5
HOH
HOH
804
B
HOH
22
5
HOH
HOH
805
B
HOH
29
5
HOH
HOH
806
B
HOH
31
5
HOH
HOH
807
B
HOH
32
5
HOH
HOH
808
B
HOH
33
5
HOH
HOH
809
B
HOH
35
5
HOH
HOH
810
B
HOH
36
5
HOH
HOH
811
B
HOH
38
5
HOH
HOH
812
B
HOH
39
5
HOH
HOH
813
B
n
1
1
A
n
2
2
A
GLY
3
n
3
GLY
3
A
THR
4
n
4
THR
4
A
ALA
5
n
5
ALA
5
A
LEU
6
n
6
LEU
6
A
LYS
7
n
7
LYS
7
A
ARG
8
n
8
ARG
8
A
LEU
9
n
9
LEU
9
A
MET
10
n
10
MET
10
A
ALA
11
n
11
ALA
11
A
GLU
12
n
12
GLU
12
A
TYR
13
n
13
TYR
13
A
LYS
14
n
14
LYS
14
A
GLN
15
n
15
GLN
15
A
LEU
16
n
16
LEU
16
A
THR
17
n
17
THR
17
A
LEU
18
n
18
LEU
18
A
ASN
19
n
19
ASN
19
A
PRO
20
n
20
PRO
20
A
PRO
21
n
21
PRO
21
A
GLU
22
n
22
GLU
22
A
GLY
23
n
23
GLY
23
A
ILE
24
n
24
ILE
24
A
VAL
25
n
25
VAL
25
A
ALA
26
n
26
ALA
26
A
GLY
27
n
27
GLY
27
A
PRO
28
n
28
PRO
28
A
MET
29
n
29
MET
29
A
ASN
30
n
30
ASN
30
A
GLU
31
n
31
GLU
31
A
GLU
32
n
32
GLU
32
A
ASN
33
n
33
ASN
33
A
PHE
34
n
34
PHE
34
A
PHE
35
n
35
PHE
35
A
GLU
36
n
36
GLU
36
A
TRP
37
n
37
TRP
37
A
GLU
38
n
38
GLU
38
A
ALA
39
n
39
ALA
39
A
LEU
40
n
40
LEU
40
A
ILE
41
n
41
ILE
41
A
MET
42
n
42
MET
42
A
GLY
43
n
43
GLY
43
A
PRO
44
n
44
PRO
44
A
GLU
45
n
45
GLU
45
A
ASP
46
n
46
ASP
46
A
THR
47
n
47
THR
47
A
CYS
48
n
48
CYS
48
A
PHE
49
n
49
PHE
49
A
GLU
50
n
50
GLU
50
A
PHE
51
n
51
PHE
51
A
GLY
52
n
52
GLY
52
A
VAL
53
n
53
VAL
53
A
PHE
54
n
54
PHE
54
A
PRO
55
n
55
PRO
55
A
ALA
56
n
56
ALA
56
A
ILE
57
n
57
ILE
57
A
LEU
58
n
58
LEU
58
A
SER
59
n
59
SER
59
A
PHE
60
n
60
PHE
60
A
PRO
61
n
61
PRO
61
A
LEU
62
n
62
LEU
62
A
ASP
63
n
63
ASP
63
A
TYR
64
n
64
TYR
64
A
PRO
65
n
65
PRO
65
A
LEU
66
n
66
LEU
66
A
SER
67
n
67
SER
67
A
PRO
68
n
68
PRO
68
A
PRO
69
n
69
PRO
69
A
LYS
70
n
70
LYS
70
A
MET
71
n
71
MET
71
A
ARG
72
n
72
ARG
72
A
PHE
73
n
73
PHE
73
A
THR
74
n
74
THR
74
A
CYS
75
n
75
CYS
75
A
GLU
76
n
76
GLU
76
A
MET
77
n
77
MET
77
A
PHE
78
n
78
PHE
78
A
HIS
79
n
79
HIS
79
A
PRO
80
n
80
PRO
80
A
ASN
81
n
81
ASN
81
A
ILE
82
n
82
ILE
82
A
TYR
83
n
83
TYR
83
A
PRO
84
n
84
PRO
84
A
ASP
85
n
85
ASP
85
A
GLY
86
n
86
GLY
86
A
ARG
87
n
87
ARG
87
A
VAL
88
n
88
VAL
88
A
CYS
89
n
89
CYS
89
A
ILE
90
n
90
ILE
90
A
SER
91
n
91
SER
91
A
ILE
92
n
92
ILE
92
A
LEU
93
n
93
LEU
93
A
HIS
94
n
94
HIS
94
A
ALA
95
n
95
ALA
95
A
PRO
96
n
96
PRO
96
A
n
97
97
A
n
98
98
A
n
99
99
A
n
100
100
A
n
101
101
A
n
102
102
A
n
103
103
A
n
104
104
A
n
105
105
A
SER
106
n
106
SER
106
A
ALA
107
n
107
ALA
107
A
GLU
108
n
108
GLU
108
A
ARG
109
n
109
ARG
109
A
TRP
110
n
110
TRP
110
A
SER
111
n
111
SER
111
A
PRO
112
n
112
PRO
112
A
VAL
113
n
113
VAL
113
A
GLN
114
n
114
GLN
114
A
SER
115
n
115
SER
115
A
VAL
116
n
116
VAL
116
A
GLU
117
n
117
GLU
117
A
LYS
118
n
118
LYS
118
A
ILE
119
n
119
ILE
119
A
LEU
120
n
120
LEU
120
A
LEU
121
n
121
LEU
121
A
SER
122
n
122
SER
122
A
VAL
123
n
123
VAL
123
A
VAL
124
n
124
VAL
124
A
SER
125
n
125
SER
125
A
MET
126
n
126
MET
126
A
LEU
127
n
127
LEU
127
A
ALA
128
n
128
ALA
128
A
GLU
129
n
129
GLU
129
A
PRO
130
n
130
PRO
130
A
ASN
131
n
131
ASN
131
A
ASP
132
n
132
ASP
132
A
GLU
133
n
133
GLU
133
A
SER
134
n
134
SER
134
A
GLY
135
n
135
GLY
135
A
ALA
136
n
136
ALA
136
A
ASN
137
n
137
ASN
137
A
VAL
138
n
138
VAL
138
A
ASP
139
n
139
ASP
139
A
ALA
140
n
140
ALA
140
A
SER
141
n
141
SER
141
A
LYS
142
n
142
LYS
142
A
MET
143
n
143
MET
143
A
TRP
144
n
144
TRP
144
A
ARG
145
n
145
ARG
145
A
ASP
146
n
146
ASP
146
A
ASP
147
n
147
ASP
147
A
ARG
148
n
148
ARG
148
A
GLU
149
n
149
GLU
149
A
GLN
150
n
150
GLN
150
A
PHE
151
n
151
PHE
151
A
TYR
152
n
152
TYR
152
A
LYS
153
n
153
LYS
153
A
ILE
154
n
154
ILE
154
A
ALA
155
n
155
ALA
155
A
LYS
156
n
156
LYS
156
A
GLN
157
n
157
GLN
157
A
ILE
158
n
158
ILE
158
A
VAL
159
n
159
VAL
159
A
GLN
160
n
160
GLN
160
A
LYS
161
n
161
LYS
161
A
SER
162
n
162
SER
162
A
LEU
163
n
163
LEU
163
A
GLY
164
n
164
GLY
164
A
LEU
165
n
165
LEU
165
A
n
1
311
B
n
2
312
B
n
3
313
B
n
4
314
B
n
5
315
B
n
6
316
B
n
7
317
B
n
8
318
B
n
9
319
B
n
10
320
B
n
11
321
B
n
12
322
B
n
13
323
B
n
14
324
B
n
15
325
B
n
16
326
B
n
17
327
B
n
18
328
B
n
19
329
B
n
20
330
B
n
21
331
B
n
22
332
B
n
23
333
B
n
24
334
B
n
25
335
B
n
26
336
B
n
27
337
B
n
28
338
B
ASP
339
n
29
ASP
339
B
ASP
340
n
30
ASP
340
B
CYS
341
n
31
CYS
341
B
ALA
342
n
32
ALA
342
B
ILE
343
n
33
ILE
343
B
CYS
344
n
34
CYS
344
B
TRP
345
n
35
TRP
345
B
ASP
346
n
36
ASP
346
B
SER
347
n
37
SER
347
B
MET
348
n
38
MET
348
B
GLN
349
n
39
GLN
349
B
ALA
350
n
40
ALA
350
B
ALA
351
n
41
ALA
351
B
ARG
352
n
42
ARG
352
B
LYS
353
n
43
LYS
353
B
LEU
354
n
44
LEU
354
B
PRO
355
n
45
PRO
355
B
CYS
356
n
46
CYS
356
B
GLY
357
n
47
GLY
357
B
HIS
358
n
48
HIS
358
B
LEU
359
n
49
LEU
359
B
PHE
360
n
50
PHE
360
B
HIS
361
n
51
HIS
361
B
ASN
362
n
52
ASN
362
B
SER
363
n
53
SER
363
B
CYS
364
n
54
CYS
364
B
LEU
365
n
55
LEU
365
B
ARG
366
n
56
ARG
366
B
SER
367
n
57
SER
367
B
TRP
368
n
58
TRP
368
B
LEU
369
n
59
LEU
369
B
GLU
370
n
60
GLU
370
B
GLN
371
n
61
GLN
371
B
ASP
372
n
62
ASP
372
B
THR
373
n
63
THR
373
B
SER
374
n
64
SER
374
B
CYS
375
n
65
CYS
375
B
PRO
376
n
66
PRO
376
B
THR
377
n
67
THR
377
B
CYS
378
n
68
CYS
378
B
ARG
379
n
69
ARG
379
B
MET
380
n
70
MET
380
B
n
71
521
B
n
72
522
B
n
73
523
B
n
74
524
B
n
75
525
B
n
76
526
B
n
77
527
B
n
78
528
B
n
79
529
B
n
80
530
B
n
81
531
B
n
82
532
B
n
83
533
B
n
84
534
B
n
85
535
B
n
86
536
B
n
87
537
B
n
88
538
B
n
89
539
B
n
90
540
B
n
91
541
B
n
92
542
B
n
93
543
B
n
94
544
B
n
95
545
B
n
96
546
B
n
97
547
B
n
98
548
B
n
99
549
B
n
100
550
B
n
101
551
B
n
102
552
B
n
103
553
B
n
104
554
B
n
105
555
B
n
106
556
B
n
107
557
B
n
108
558
B
n
109
559
B
n
110
560
B
n
111
561
B
n
112
562
B
n
113
563
B
n
114
564
B
n
115
565
B
n
116
566
B
n
117
567
B
n
118
568
B
n
119
569
B
n
120
570
B
n
121
571
B
n
122
572
B
GLY
573
n
123
GLY
573
B
SER
574
n
124
SER
574
B
ALA
575
n
125
ALA
575
B
ASP
576
n
126
ASP
576
B
GLU
577
n
127
GLU
577
B
ARG
578
n
128
ARG
578
B
GLN
579
n
129
GLN
579
B
ARG
580
n
130
ARG
580
B
MET
581
n
131
MET
581
B
LEU
582
n
132
LEU
582
B
VAL
583
n
133
VAL
583
B
GLN
584
n
134
GLN
584
B
ARG
585
n
135
ARG
585
B
LYS
586
n
136
LYS
586
B
ASP
587
n
137
ASP
587
B
GLU
588
n
138
GLU
588
B
LEU
589
n
139
LEU
589
B
LEU
590
n
140
LEU
590
B
GLN
591
n
141
GLN
591
B
GLN
592
n
142
GLN
592
B
ALA
593
n
143
ALA
593
B
ARG
594
n
144
ARG
594
B
LYS
595
n
145
LYS
595
B
ARG
596
n
146
ARG
596
B
PHE
597
n
147
PHE
597
B
LEU
598
n
148
LEU
598
B
ASN
599
n
149
ASN
599
B
n
150
600
B
author_and_software_defined_assembly
PISA
2
dimeric
2480
-36
13370
B
CYS
356
B
SG
CYS
46
1_555
B
ZN
702
D
ZN
ZN
1_555
B
HIS
358
B
ND1
HIS
48
1_555
122.9
B
CYS
356
B
SG
CYS
46
1_555
B
ZN
702
D
ZN
ZN
1_555
B
CYS
375
B
SG
CYS
65
1_555
92.8
B
HIS
358
B
ND1
HIS
48
1_555
B
ZN
702
D
ZN
ZN
1_555
B
CYS
375
B
SG
CYS
65
1_555
127.4
B
CYS
356
B
SG
CYS
46
1_555
B
ZN
702
D
ZN
ZN
1_555
B
CYS
378
B
SG
CYS
68
1_555
90.9
B
HIS
358
B
ND1
HIS
48
1_555
B
ZN
702
D
ZN
ZN
1_555
B
CYS
378
B
SG
CYS
68
1_555
129.1
B
CYS
375
B
SG
CYS
65
1_555
B
ZN
702
D
ZN
ZN
1_555
B
CYS
378
B
SG
CYS
68
1_555
81.3
B
HIS
361
B
ND1
HIS
51
1_555
B
ZN
701
C
ZN
ZN
1_555
B
CYS
364
B
SG
CYS
54
1_555
113.1
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
25
A
N
VAL
25
A
O
LEU
40
A
O
LEU
40
A
N
ILE
41
A
N
ILE
41
A
O
PHE
54
A
O
PHE
54
A
N
SER
59
A
N
SER
59
A
O
LYS
70
A
O
LYS
70
B
N
ARG
352
B
N
ARG
42
B
O
PHE
360
B
O
PHE
50
1
A
MET
1
A
MET
1
1
Y
1
A
ALA
2
A
ALA
2
1
Y
1
A
GLY
97
A
GLY
97
1
Y
1
A
ASP
98
A
ASP
98
1
Y
1
A
ASP
99
A
ASP
99
1
Y
1
A
PRO
100
A
PRO
100
1
Y
1
A
MET
101
A
MET
101
1
Y
1
A
GLY
102
A
GLY
102
1
Y
1
A
TYR
103
A
TYR
103
1
Y
1
A
GLU
104
A
GLU
104
1
Y
1
A
SER
105
A
SER
105
1
Y
1
B
HIS
311
B
HIS
1
1
Y
1
B
MET
312
B
MET
2
1
Y
1
B
LYS
313
B
LYS
3
1
Y
1
B
ASN
314
B
ASN
4
1
Y
1
B
TYR
315
B
TYR
5
1
Y
1
B
LEU
316
B
LEU
6
1
Y
1
B
ARG
317
B
ARG
7
1
Y
1
B
VAL
318
B
VAL
8
1
Y
1
B
VAL
319
B
VAL
9
1
Y
1
B
GLY
320
B
GLY
10
1
Y
1
B
ASN
321
B
ASN
11
1
Y
1
B
MET
322
B
MET
12
1
Y
1
B
GLU
323
B
GLU
13
1
Y
1
B
ALA
324
B
ALA
14
1
Y
1
B
ARG
325
B
ARG
15
1
Y
1
B
PHE
326
B
PHE
16
1
Y
1
B
ALA
327
B
ALA
17
1
Y
1
B
VAL
328
B
VAL
18
1
Y
1
B
ALA
329
B
ALA
19
1
Y
1
B
THR
330
B
THR
20
1
Y
1
B
PRO
331
B
PRO
21
1
Y
1
B
GLU
332
B
GLU
22
1
Y
1
B
GLU
333
B
GLU
23
1
Y
1
B
LEU
334
B
LEU
24
1
Y
1
B
ALA
335
B
ALA
25
1
Y
1
B
VAL
336
B
VAL
26
1
Y
1
B
ASN
337
B
ASN
27
1
Y
1
B
ASN
338
B
ASN
28
1
Y
1
B
SER
521
B
SER
71
1
Y
1
B
LEU
522
B
LEU
72
1
Y
1
B
ASN
523
B
ASN
73
1
Y
1
B
ILE
524
B
ILE
74
1
Y
1
B
ALA
525
B
ALA
75
1
Y
1
B
ASP
526
B
ASP
76
1
Y
1
B
ASN
527
B
ASN
77
1
Y
1
B
ASN
528
B
ASN
78
1
Y
1
B
ARG
529
B
ARG
79
1
Y
1
B
VAL
530
B
VAL
80
1
Y
1
B
ARG
531
B
ARG
81
1
Y
1
B
GLU
532
B
GLU
82
1
Y
1
B
GLU
533
B
GLU
83
1
Y
1
B
GLY
534
B
GLY
84
1
Y
1
B
GLY
535
B
GLY
85
1
Y
1
B
GLY
536
B
GLY
86
1
Y
1
B
GLY
537
B
GLY
87
1
Y
1
B
GLY
538
B
GLY
88
1
Y
1
B
GLY
539
B
GLY
89
1
Y
1
B
GLY
540
B
GLY
90
1
Y
1
B
SER
541
B
SER
91
1
Y
1
B
SER
542
B
SER
92
1
Y
1
B
GLY
543
B
GLY
93
1
Y
1
B
SER
544
B
SER
94
1
Y
1
B
SER
545
B
SER
95
1
Y
1
B
GLY
546
B
GLY
96
1
Y
1
B
GLY
547
B
GLY
97
1
Y
1
B
SER
548
B
SER
98
1
Y
1
B
GLY
549
B
GLY
99
1
Y
1
B
GLY
550
B
GLY
100
1
Y
1
B
GLY
551
B
GLY
101
1
Y
1
B
SER
552
B
SER
102
1
Y
1
B
GLY
553
B
GLY
103
1
Y
1
B
SER
554
B
SER
104
1
Y
1
B
SER
555
B
SER
105
1
Y
1
B
SER
556
B
SER
106
1
Y
1
B
GLY
557
B
GLY
107
1
Y
1
B
GLY
558
B
GLY
108
1
Y
1
B
GLY
559
B
GLY
109
1
Y
1
B
GLY
560
B
GLY
110
1
Y
1
B
GLY
561
B
GLY
111
1
Y
1
B
SER
562
B
SER
112
1
Y
1
B
GLY
563
B
GLY
113
1
Y
1
B
GLY
564
B
GLY
114
1
Y
1
B
GLY
565
B
GLY
115
1
Y
1
B
SER
566
B
SER
116
1
Y
1
B
GLY
567
B
GLY
117
1
Y
1
B
GLY
568
B
GLY
118
1
Y
1
B
GLY
569
B
GLY
119
1
Y
1
B
GLY
570
B
GLY
120
1
Y
1
B
GLY
571
B
GLY
121
1
Y
1
B
GLY
572
B
GLY
122
1
Y
1
B
LYS
600
B
LYS
150
1
Y
1
A
GLU
50
-34.83
123.20
1
A
ASP
85
B
-95.01
32.31
1
A
ALA
107
-67.61
-139.58
1
A
ARG
109
-58.90
-178.00
1
A
PRO
112
-56.54
-7.04
1
A
GLU
133
-104.83
66.68
1
A
ASP
147
-109.72
67.36
1
B
ILE
343
-74.29
-75.59
1
B
TRP
345
-100.44
45.05
1
B
MET
348
47.50
72.17
1
B
CYS
356
-48.58
-6.86
1
B
ASP
372
-172.28
132.91
1
B
CYS
378
-113.43
-101.10
1
B
ARG
379
-146.58
-32.37
108.620
61.0837
35.140
7.2450
0.0000
-0.0000
7.2450
0.0000
-14.4900
0.2810
0.2259
0.2302
2.3
39.123
1000
12488
12488
8.0100
96.97
1.000
0.280
0.7449
0.4100
RANDOM
1
1.350
MOLECULAR REPLACEMENT
30.2900
0.9000
1.1100
PDB ENTRY 3H8K
ML
FLAT BULK SOLVENT MODEL
49.3680
0.3340
2.3
39.123
39
1836
14
0
1783
0.009
1843
1.220
2489
0.083
262
0.006
326
19.349
703
0.3746
0.3004
2.4184
126
1445
1571
1571
7
88.0000
0.3614
0.2870
2.5698
134
1530
1664
1664
7
93.0000
0.3904
0.2832
2.7682
145
1671
1816
1816
7
100.0000
0.3313
0.2701
3.0467
143
1653
1796
1796
7
100.0000
0.2772
0.2426
3.4873
146
1676
1822
1822
7
100.0000
0.2658
0.1849
4.3927
149
1708
1857
1857
7
100.0000
0.2186
0.1905
39.1291
157
1805
1962
1962
7
98.0000
2.300
40.000
4LAD
12528
12528
-6
-3
0.044
1.071
1
18.400
8.200
96.900
0.396
2.300
2.380
2.6
1132
1.054
1
4.700
90.300
0.299
2.380
2.480
4.7
1083
1.036
1
5.500
86.200
0.313
2.480
2.590
6.6
1223
1.011
1
7.600
97.000
0.231
2.590
2.730
9.6
1254
0.943
1
8.900
99.900
0.147
2.730
2.900
18.3
1265
1.049
1
9.400
100.000
0.085
2.900
3.120
30.3
1273
1.056
1
9.500
100.000
0.062
3.120
3.440
35.9
1301
1.067
1
9.300
99.800
0.046
3.440
3.930
37.6
1291
1.060
1
8.900
99.800
0.030
3.930
4.950
57.8
1314
1.159
1
9.000
99.200
0.027
4.950
40.000
54.2
1392
1.230
1
8.400
96.000
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data reduction
HKL-3000
data scaling
HKL-3000
Crystal Structure of the Ube2g2:RING-G2BR complex
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
5
N
N
5
N
N
A
GLY
3
A
GLY
3
HELX_P
A
ASN
19
A
ASN
19
1
1
17
A
ILE
90
A
ILE
90
HELX_P
A
HIS
94
A
HIS
94
5
2
5
A
SER
115
A
SER
115
HELX_P
A
GLU
129
A
GLU
129
1
3
15
A
ASN
137
A
ASN
137
HELX_P
A
ASP
146
A
ASP
146
1
4
10
A
ASP
147
A
ASP
147
HELX_P
A
LEU
163
A
LEU
163
1
5
17
B
ASN
362
B
ASN
52
HELX_P
B
GLU
370
B
GLU
60
1
6
9
B
SER
574
B
SER
124
HELX_P
B
LEU
598
B
LEU
148
1
7
25
metalc
2.533
B
CYS
356
B
SG
CYS
46
1_555
B
ZN
702
D
ZN
ZN
1_555
metalc
2.319
B
HIS
358
B
ND1
HIS
48
1_555
B
ZN
702
D
ZN
ZN
1_555
metalc
2.352
B
HIS
361
B
ND1
HIS
51
1_555
B
ZN
701
C
ZN
ZN
1_555
metalc
2.409
B
CYS
364
B
SG
CYS
54
1_555
B
ZN
701
C
ZN
ZN
1_555
metalc
2.419
B
CYS
375
B
SG
CYS
65
1_555
B
ZN
702
D
ZN
ZN
1_555
metalc
2.488
B
CYS
378
B
SG
CYS
68
1_555
B
ZN
702
D
ZN
ZN
1_555
LIGASE/LIGASE
E2:E3 complex, LIGASE-LIGASE complex
A
TYR
64
A
TYR
64
1
A
PRO
65
A
PRO
65
1.25
UB2G2_HUMAN
UNP
1
1
P60604
MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP
NIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQ
KSLGL
AMFR_HUMAN
UNP
2
313
Q9UKV5
KNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVRE
E
AMFR_HUMAN
UNP
2
574
Q9UKV5
SADERQRMLVQRKDELLQQARKRFLNK
1
165
4LAD
1
165
P60604
A
1
1
165
313
393
4LAD
313
533
Q9UKV5
B
2
3
83
574
600
4LAD
574
600
Q9UKV5
B
3
124
150
2
expression tag
HIS
311
4LAD
B
Q9UKV5
UNP
1
2
expression tag
MET
312
4LAD
B
Q9UKV5
UNP
2
2
linker
GLY
534
4LAD
B
Q9UKV5
UNP
84
2
linker
GLY
535
4LAD
B
Q9UKV5
UNP
85
2
linker
GLY
536
4LAD
B
Q9UKV5
UNP
86
2
linker
GLY
537
4LAD
B
Q9UKV5
UNP
87
2
linker
GLY
538
4LAD
B
Q9UKV5
UNP
88
2
linker
GLY
539
4LAD
B
Q9UKV5
UNP
89
2
linker
GLY
540
4LAD
B
Q9UKV5
UNP
90
2
linker
SER
541
4LAD
B
Q9UKV5
UNP
91
2
linker
SER
542
4LAD
B
Q9UKV5
UNP
92
2
linker
GLY
543
4LAD
B
Q9UKV5
UNP
93
2
linker
SER
544
4LAD
B
Q9UKV5
UNP
94
2
linker
SER
545
4LAD
B
Q9UKV5
UNP
95
2
linker
GLY
546
4LAD
B
Q9UKV5
UNP
96
2
linker
GLY
547
4LAD
B
Q9UKV5
UNP
97
2
linker
SER
548
4LAD
B
Q9UKV5
UNP
98
2
linker
GLY
549
4LAD
B
Q9UKV5
UNP
99
2
linker
GLY
550
4LAD
B
Q9UKV5
UNP
100
2
linker
GLY
551
4LAD
B
Q9UKV5
UNP
101
2
linker
SER
552
4LAD
B
Q9UKV5
UNP
102
2
linker
GLY
553
4LAD
B
Q9UKV5
UNP
103
2
linker
SER
554
4LAD
B
Q9UKV5
UNP
104
2
linker
SER
555
4LAD
B
Q9UKV5
UNP
105
2
linker
SER
556
4LAD
B
Q9UKV5
UNP
106
2
linker
GLY
557
4LAD
B
Q9UKV5
UNP
107
2
linker
GLY
558
4LAD
B
Q9UKV5
UNP
108
2
linker
GLY
559
4LAD
B
Q9UKV5
UNP
109
2
linker
GLY
560
4LAD
B
Q9UKV5
UNP
110
2
linker
GLY
561
4LAD
B
Q9UKV5
UNP
111
2
linker
SER
562
4LAD
B
Q9UKV5
UNP
112
2
linker
GLY
563
4LAD
B
Q9UKV5
UNP
113
2
linker
GLY
564
4LAD
B
Q9UKV5
UNP
114
2
linker
GLY
565
4LAD
B
Q9UKV5
UNP
115
2
linker
SER
566
4LAD
B
Q9UKV5
UNP
116
2
linker
GLY
567
4LAD
B
Q9UKV5
UNP
117
2
linker
GLY
568
4LAD
B
Q9UKV5
UNP
118
2
linker
GLY
569
4LAD
B
Q9UKV5
UNP
119
2
linker
GLY
570
4LAD
B
Q9UKV5
UNP
120
2
linker
GLY
571
4LAD
B
Q9UKV5
UNP
121
2
linker
GLY
572
4LAD
B
Q9UKV5
UNP
122
2
linker
GLY
573
4LAD
B
Q9UKV5
UNP
123
4
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
24
A
ILE
24
A
PRO
28
A
PRO
28
A
GLU
36
A
GLU
36
A
MET
42
A
MET
42
A
VAL
53
A
VAL
53
A
SER
59
A
SER
59
A
LYS
70
A
LYS
70
A
PHE
73
A
PHE
73
B
ALA
351
B
ALA
41
B
LYS
353
B
LYS
43
B
LEU
359
B
LEU
49
B
HIS
361
B
HIS
51
BINDING SITE FOR RESIDUE ZN B 701
B
ZN
701
Software
4
BINDING SITE FOR RESIDUE ZN B 702
B
ZN
702
Software
4
BINDING SITE FOR RESIDUE OXL B 703
B
OXL
703
Software
1
BINDING SITE FOR RESIDUE OXL B 704
B
OXL
704
Software
1
B
CYS
341
B
CYS
31
4
7_555
B
CYS
344
B
CYS
34
4
7_555
B
HIS
361
B
HIS
51
4
1_555
B
CYS
364
B
CYS
54
4
1_555
B
CYS
356
B
CYS
46
4
1_555
B
HIS
358
B
HIS
48
4
1_555
B
CYS
375
B
CYS
65
4
1_555
B
CYS
378
B
CYS
68
4
1_555
B
ASP
340
B
ASP
30
1
1_555
B
HOH
812
H
HOH
1
1_555
92
P 41 21 2