0.017169 0.000000 0.000000 0.000000 0.017169 0.000000 0.000000 0.000000 0.006312 0.000000 0.000000 0.000000 Liang, Y.-H. Li, J. Das, R. Byrd, R.A. 0000-0001-6942-1514 Ji, X. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 58.246 58.246 158.431 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C2 O4 -2 88.019 OXALATE ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N C N 251 N C N 252 N O N 253 N O N 254 N O N 255 N O N 256 N N N 257 S C N 258 N C N 259 N O N 260 N C Y 261 N C Y 262 N C Y 263 N C Y 264 N C Y 265 N C Y 266 N C N 267 N O N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N N N 280 S C N 281 N C N 282 N O N 283 N C N 284 N C N 285 N C N 286 N O N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N N N 297 S C N 298 N C N 299 N O N 300 N C N 301 N O N 302 N O N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N N N 311 S C N 312 N C N 313 N O N 314 R C N 315 N O N 316 N C N 317 N O N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N N N 328 S C N 329 N C N 330 N O N 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N N Y 336 N C Y 337 N C Y 338 N C Y 339 N C Y 340 N C N 341 N O N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N N N 355 S C N 356 N C N 357 N O N 358 N C Y 359 N C Y 360 N C Y 361 N C Y 362 N C Y 363 N C Y 364 N C N 365 N O N 366 N O N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N N N 379 S C N 380 N C N 381 N O N 382 N C N 383 N C N 384 N C N 385 N O N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N doub N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing Y 253 N doub Y 254 N sing Y 255 N sing N 256 N sing Y 257 N doub N 258 N sing Y 259 N doub N 260 N sing Y 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N doub N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N doub N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N doub N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing Y 322 N doub Y 323 N sing Y 324 N sing N 325 N sing Y 326 N doub Y 327 N sing Y 328 N sing N 329 N sing Y 330 N sing Y 331 N doub N 332 N sing Y 333 N doub N 334 N sing Y 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N doub N 346 N sing N 347 N sing N 348 N sing N 349 N sing Y 350 N doub Y 351 N sing Y 352 N sing N 353 N sing Y 354 N doub N 355 N sing Y 356 N doub N 357 N sing Y 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N doub N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing UK Embo J. EMJODG 0897 0261-4189 32 2504 2516 10.1038/emboj.2013.174 23942235 Allosteric regulation of E2:E3 interactions promote a processive ubiquitination machine. 2013 0000-0001-6942-1514 10.2210/pdb4lad/pdb pdb_00004lad 100 1 CCD 2009-11-04 MARMOSAIC 300 mm CCD SINGLE WAVELENGTH M x-ray 1 1.000 1.0 22-ID APS 1.000 SYNCHROTRON APS BEAMLINE 22-ID 18582.262 Ubiquitin-conjugating enzyme E2 G2 6.3.2.19 1 man polymer 15471.062 E3 ubiquitin-protein ligase AMFR 6.3.2.- RING region (UNP residues 313-393) and G2BR region (UNP residues 574-600) 40 a.a. insertion 1 man polymer 65.409 ZINC ION 2 syn non-polymer 88.019 OXALATE ION 2 syn non-polymer 18.015 water 39 nat water Ubiquitin carrier protein G2, Ubiquitin-protein ligase G2 Autocrine motility factor receptor, AMF receptor, RING finger protein 45, gp78 no no MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP NIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQ KSLGL MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP NIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQ KSLGL A polypeptide(L) no no HMKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRV REEGGGGGGGSSGSSGGSGGGSGSSSGGGGGSGGGSGGGGGGGSADERQRMLVQRKDELLQQARKRFLNK HMKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRV REEGGGGGGGSSGSSGGSGGGSGSSSGGGGGSGGGSGGGGGGGSADERQRMLVQRKDELLQQARKRFLNK B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample UBE2G2, Ubiquitin-conjugating enzyme E2G2 isoform 1 9606 Homo sapiens 511693 Escherichia coli BL21(star) plasmid pGEX human sample 3 83 AMFR, Autocrine motility factor receptor, RNF45 9606 Homo sapiens 511693 Escherichia coli BL21(star) plasmid pET3a human sample 124 150 AMFR, Autocrine motility factor receptor, RNF45 9606 Homo sapiens 511693 Escherichia coli BL21(star) plasmid pET3a 1 1.97 37.66 VAPOR DIFFUSION, SITTING DROP 8.5 25% PEG-3350, 0.1M Tris-HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 entity_src_gen software software audit_author chem_comp_atom chem_comp_bond citation_author database_2 pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site pdbx_initial_refinement_model repository Initial release Database references Refinement description Source and taxonomy Refinement description Data collection Database references Derived calculations Structure summary Refinement description 1 0 2013-08-28 1 1 2013-09-25 1 2 2017-08-02 1 3 2017-11-15 1 4 2023-08-30 1 5 2023-09-20 _audit_author.identifier_ORCID _citation_author.identifier_ORCID _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id NMR solution structure of the gp78 RING NMR-based docking model of the Ube2g2:RING:G2BR complex RCSB Y RCSB 2013-06-19 REL REL ZN ZINC ION OXL OXALATE ION HOH water 3H8K PDB ENTRY 3H8K PDB experimental model ZN 1 3 ZN ZN 701 B ZN 2 3 ZN ZN 702 B OXL 1 4 OXL OXL 703 B OXL 2 4 OXL OXL 704 B HOH 1 5 HOH HOH 201 A HOH 2 5 HOH HOH 202 A HOH 4 5 HOH HOH 203 A HOH 5 5 HOH HOH 204 A HOH 6 5 HOH HOH 205 A HOH 7 5 HOH HOH 206 A HOH 8 5 HOH HOH 207 A HOH 9 5 HOH HOH 208 A HOH 10 5 HOH HOH 209 A HOH 11 5 HOH HOH 210 A HOH 12 5 HOH HOH 211 A HOH 13 5 HOH HOH 212 A HOH 16 5 HOH HOH 213 A HOH 18 5 HOH HOH 214 A HOH 19 5 HOH HOH 215 A HOH 20 5 HOH HOH 216 A HOH 21 5 HOH HOH 217 A HOH 23 5 HOH HOH 218 A HOH 24 5 HOH HOH 219 A HOH 25 5 HOH HOH 220 A HOH 26 5 HOH HOH 221 A HOH 27 5 HOH HOH 222 A HOH 28 5 HOH HOH 223 A HOH 30 5 HOH HOH 224 A HOH 34 5 HOH HOH 225 A HOH 37 5 HOH HOH 226 A HOH 3 5 HOH HOH 801 B HOH 14 5 HOH HOH 802 B HOH 15 5 HOH HOH 803 B HOH 17 5 HOH HOH 804 B HOH 22 5 HOH HOH 805 B HOH 29 5 HOH HOH 806 B HOH 31 5 HOH HOH 807 B HOH 32 5 HOH HOH 808 B HOH 33 5 HOH HOH 809 B HOH 35 5 HOH HOH 810 B HOH 36 5 HOH HOH 811 B HOH 38 5 HOH HOH 812 B HOH 39 5 HOH HOH 813 B n 1 1 A n 2 2 A GLY 3 n 3 GLY 3 A THR 4 n 4 THR 4 A ALA 5 n 5 ALA 5 A LEU 6 n 6 LEU 6 A LYS 7 n 7 LYS 7 A ARG 8 n 8 ARG 8 A LEU 9 n 9 LEU 9 A MET 10 n 10 MET 10 A ALA 11 n 11 ALA 11 A GLU 12 n 12 GLU 12 A TYR 13 n 13 TYR 13 A LYS 14 n 14 LYS 14 A GLN 15 n 15 GLN 15 A LEU 16 n 16 LEU 16 A THR 17 n 17 THR 17 A LEU 18 n 18 LEU 18 A ASN 19 n 19 ASN 19 A PRO 20 n 20 PRO 20 A PRO 21 n 21 PRO 21 A GLU 22 n 22 GLU 22 A GLY 23 n 23 GLY 23 A ILE 24 n 24 ILE 24 A VAL 25 n 25 VAL 25 A ALA 26 n 26 ALA 26 A GLY 27 n 27 GLY 27 A PRO 28 n 28 PRO 28 A MET 29 n 29 MET 29 A ASN 30 n 30 ASN 30 A GLU 31 n 31 GLU 31 A GLU 32 n 32 GLU 32 A ASN 33 n 33 ASN 33 A PHE 34 n 34 PHE 34 A PHE 35 n 35 PHE 35 A GLU 36 n 36 GLU 36 A TRP 37 n 37 TRP 37 A GLU 38 n 38 GLU 38 A ALA 39 n 39 ALA 39 A LEU 40 n 40 LEU 40 A ILE 41 n 41 ILE 41 A MET 42 n 42 MET 42 A GLY 43 n 43 GLY 43 A PRO 44 n 44 PRO 44 A GLU 45 n 45 GLU 45 A ASP 46 n 46 ASP 46 A THR 47 n 47 THR 47 A CYS 48 n 48 CYS 48 A PHE 49 n 49 PHE 49 A GLU 50 n 50 GLU 50 A PHE 51 n 51 PHE 51 A GLY 52 n 52 GLY 52 A VAL 53 n 53 VAL 53 A PHE 54 n 54 PHE 54 A PRO 55 n 55 PRO 55 A ALA 56 n 56 ALA 56 A ILE 57 n 57 ILE 57 A LEU 58 n 58 LEU 58 A SER 59 n 59 SER 59 A PHE 60 n 60 PHE 60 A PRO 61 n 61 PRO 61 A LEU 62 n 62 LEU 62 A ASP 63 n 63 ASP 63 A TYR 64 n 64 TYR 64 A PRO 65 n 65 PRO 65 A LEU 66 n 66 LEU 66 A SER 67 n 67 SER 67 A PRO 68 n 68 PRO 68 A PRO 69 n 69 PRO 69 A LYS 70 n 70 LYS 70 A MET 71 n 71 MET 71 A ARG 72 n 72 ARG 72 A PHE 73 n 73 PHE 73 A THR 74 n 74 THR 74 A CYS 75 n 75 CYS 75 A GLU 76 n 76 GLU 76 A MET 77 n 77 MET 77 A PHE 78 n 78 PHE 78 A HIS 79 n 79 HIS 79 A PRO 80 n 80 PRO 80 A ASN 81 n 81 ASN 81 A ILE 82 n 82 ILE 82 A TYR 83 n 83 TYR 83 A PRO 84 n 84 PRO 84 A ASP 85 n 85 ASP 85 A GLY 86 n 86 GLY 86 A ARG 87 n 87 ARG 87 A VAL 88 n 88 VAL 88 A CYS 89 n 89 CYS 89 A ILE 90 n 90 ILE 90 A SER 91 n 91 SER 91 A ILE 92 n 92 ILE 92 A LEU 93 n 93 LEU 93 A HIS 94 n 94 HIS 94 A ALA 95 n 95 ALA 95 A PRO 96 n 96 PRO 96 A n 97 97 A n 98 98 A n 99 99 A n 100 100 A n 101 101 A n 102 102 A n 103 103 A n 104 104 A n 105 105 A SER 106 n 106 SER 106 A ALA 107 n 107 ALA 107 A GLU 108 n 108 GLU 108 A ARG 109 n 109 ARG 109 A TRP 110 n 110 TRP 110 A SER 111 n 111 SER 111 A PRO 112 n 112 PRO 112 A VAL 113 n 113 VAL 113 A GLN 114 n 114 GLN 114 A SER 115 n 115 SER 115 A VAL 116 n 116 VAL 116 A GLU 117 n 117 GLU 117 A LYS 118 n 118 LYS 118 A ILE 119 n 119 ILE 119 A LEU 120 n 120 LEU 120 A LEU 121 n 121 LEU 121 A SER 122 n 122 SER 122 A VAL 123 n 123 VAL 123 A VAL 124 n 124 VAL 124 A SER 125 n 125 SER 125 A MET 126 n 126 MET 126 A LEU 127 n 127 LEU 127 A ALA 128 n 128 ALA 128 A GLU 129 n 129 GLU 129 A PRO 130 n 130 PRO 130 A ASN 131 n 131 ASN 131 A ASP 132 n 132 ASP 132 A GLU 133 n 133 GLU 133 A SER 134 n 134 SER 134 A GLY 135 n 135 GLY 135 A ALA 136 n 136 ALA 136 A ASN 137 n 137 ASN 137 A VAL 138 n 138 VAL 138 A ASP 139 n 139 ASP 139 A ALA 140 n 140 ALA 140 A SER 141 n 141 SER 141 A LYS 142 n 142 LYS 142 A MET 143 n 143 MET 143 A TRP 144 n 144 TRP 144 A ARG 145 n 145 ARG 145 A ASP 146 n 146 ASP 146 A ASP 147 n 147 ASP 147 A ARG 148 n 148 ARG 148 A GLU 149 n 149 GLU 149 A GLN 150 n 150 GLN 150 A PHE 151 n 151 PHE 151 A TYR 152 n 152 TYR 152 A LYS 153 n 153 LYS 153 A ILE 154 n 154 ILE 154 A ALA 155 n 155 ALA 155 A LYS 156 n 156 LYS 156 A GLN 157 n 157 GLN 157 A ILE 158 n 158 ILE 158 A VAL 159 n 159 VAL 159 A GLN 160 n 160 GLN 160 A LYS 161 n 161 LYS 161 A SER 162 n 162 SER 162 A LEU 163 n 163 LEU 163 A GLY 164 n 164 GLY 164 A LEU 165 n 165 LEU 165 A n 1 311 B n 2 312 B n 3 313 B n 4 314 B n 5 315 B n 6 316 B n 7 317 B n 8 318 B n 9 319 B n 10 320 B n 11 321 B n 12 322 B n 13 323 B n 14 324 B n 15 325 B n 16 326 B n 17 327 B n 18 328 B n 19 329 B n 20 330 B n 21 331 B n 22 332 B n 23 333 B n 24 334 B n 25 335 B n 26 336 B n 27 337 B n 28 338 B ASP 339 n 29 ASP 339 B ASP 340 n 30 ASP 340 B CYS 341 n 31 CYS 341 B ALA 342 n 32 ALA 342 B ILE 343 n 33 ILE 343 B CYS 344 n 34 CYS 344 B TRP 345 n 35 TRP 345 B ASP 346 n 36 ASP 346 B SER 347 n 37 SER 347 B MET 348 n 38 MET 348 B GLN 349 n 39 GLN 349 B ALA 350 n 40 ALA 350 B ALA 351 n 41 ALA 351 B ARG 352 n 42 ARG 352 B LYS 353 n 43 LYS 353 B LEU 354 n 44 LEU 354 B PRO 355 n 45 PRO 355 B CYS 356 n 46 CYS 356 B GLY 357 n 47 GLY 357 B HIS 358 n 48 HIS 358 B LEU 359 n 49 LEU 359 B PHE 360 n 50 PHE 360 B HIS 361 n 51 HIS 361 B ASN 362 n 52 ASN 362 B SER 363 n 53 SER 363 B CYS 364 n 54 CYS 364 B LEU 365 n 55 LEU 365 B ARG 366 n 56 ARG 366 B SER 367 n 57 SER 367 B TRP 368 n 58 TRP 368 B LEU 369 n 59 LEU 369 B GLU 370 n 60 GLU 370 B GLN 371 n 61 GLN 371 B ASP 372 n 62 ASP 372 B THR 373 n 63 THR 373 B SER 374 n 64 SER 374 B CYS 375 n 65 CYS 375 B PRO 376 n 66 PRO 376 B THR 377 n 67 THR 377 B CYS 378 n 68 CYS 378 B ARG 379 n 69 ARG 379 B MET 380 n 70 MET 380 B n 71 521 B n 72 522 B n 73 523 B n 74 524 B n 75 525 B n 76 526 B n 77 527 B n 78 528 B n 79 529 B n 80 530 B n 81 531 B n 82 532 B n 83 533 B n 84 534 B n 85 535 B n 86 536 B n 87 537 B n 88 538 B n 89 539 B n 90 540 B n 91 541 B n 92 542 B n 93 543 B n 94 544 B n 95 545 B n 96 546 B n 97 547 B n 98 548 B n 99 549 B n 100 550 B n 101 551 B n 102 552 B n 103 553 B n 104 554 B n 105 555 B n 106 556 B n 107 557 B n 108 558 B n 109 559 B n 110 560 B n 111 561 B n 112 562 B n 113 563 B n 114 564 B n 115 565 B n 116 566 B n 117 567 B n 118 568 B n 119 569 B n 120 570 B n 121 571 B n 122 572 B GLY 573 n 123 GLY 573 B SER 574 n 124 SER 574 B ALA 575 n 125 ALA 575 B ASP 576 n 126 ASP 576 B GLU 577 n 127 GLU 577 B ARG 578 n 128 ARG 578 B GLN 579 n 129 GLN 579 B ARG 580 n 130 ARG 580 B MET 581 n 131 MET 581 B LEU 582 n 132 LEU 582 B VAL 583 n 133 VAL 583 B GLN 584 n 134 GLN 584 B ARG 585 n 135 ARG 585 B LYS 586 n 136 LYS 586 B ASP 587 n 137 ASP 587 B GLU 588 n 138 GLU 588 B LEU 589 n 139 LEU 589 B LEU 590 n 140 LEU 590 B GLN 591 n 141 GLN 591 B GLN 592 n 142 GLN 592 B ALA 593 n 143 ALA 593 B ARG 594 n 144 ARG 594 B LYS 595 n 145 LYS 595 B ARG 596 n 146 ARG 596 B PHE 597 n 147 PHE 597 B LEU 598 n 148 LEU 598 B ASN 599 n 149 ASN 599 B n 150 600 B author_and_software_defined_assembly PISA 2 dimeric 2480 -36 13370 B CYS 356 B SG CYS 46 1_555 B ZN 702 D ZN ZN 1_555 B HIS 358 B ND1 HIS 48 1_555 122.9 B CYS 356 B SG CYS 46 1_555 B ZN 702 D ZN ZN 1_555 B CYS 375 B SG CYS 65 1_555 92.8 B HIS 358 B ND1 HIS 48 1_555 B ZN 702 D ZN ZN 1_555 B CYS 375 B SG CYS 65 1_555 127.4 B CYS 356 B SG CYS 46 1_555 B ZN 702 D ZN ZN 1_555 B CYS 378 B SG CYS 68 1_555 90.9 B HIS 358 B ND1 HIS 48 1_555 B ZN 702 D ZN ZN 1_555 B CYS 378 B SG CYS 68 1_555 129.1 B CYS 375 B SG CYS 65 1_555 B ZN 702 D ZN ZN 1_555 B CYS 378 B SG CYS 68 1_555 81.3 B HIS 361 B ND1 HIS 51 1_555 B ZN 701 C ZN ZN 1_555 B CYS 364 B SG CYS 54 1_555 113.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 25 A N VAL 25 A O LEU 40 A O LEU 40 A N ILE 41 A N ILE 41 A O PHE 54 A O PHE 54 A N SER 59 A N SER 59 A O LYS 70 A O LYS 70 B N ARG 352 B N ARG 42 B O PHE 360 B O PHE 50 1 A MET 1 A MET 1 1 Y 1 A ALA 2 A ALA 2 1 Y 1 A GLY 97 A GLY 97 1 Y 1 A ASP 98 A ASP 98 1 Y 1 A ASP 99 A ASP 99 1 Y 1 A PRO 100 A PRO 100 1 Y 1 A MET 101 A MET 101 1 Y 1 A GLY 102 A GLY 102 1 Y 1 A TYR 103 A TYR 103 1 Y 1 A GLU 104 A GLU 104 1 Y 1 A SER 105 A SER 105 1 Y 1 B HIS 311 B HIS 1 1 Y 1 B MET 312 B MET 2 1 Y 1 B LYS 313 B LYS 3 1 Y 1 B ASN 314 B ASN 4 1 Y 1 B TYR 315 B TYR 5 1 Y 1 B LEU 316 B LEU 6 1 Y 1 B ARG 317 B ARG 7 1 Y 1 B VAL 318 B VAL 8 1 Y 1 B VAL 319 B VAL 9 1 Y 1 B GLY 320 B GLY 10 1 Y 1 B ASN 321 B ASN 11 1 Y 1 B MET 322 B MET 12 1 Y 1 B GLU 323 B GLU 13 1 Y 1 B ALA 324 B ALA 14 1 Y 1 B ARG 325 B ARG 15 1 Y 1 B PHE 326 B PHE 16 1 Y 1 B ALA 327 B ALA 17 1 Y 1 B VAL 328 B VAL 18 1 Y 1 B ALA 329 B ALA 19 1 Y 1 B THR 330 B THR 20 1 Y 1 B PRO 331 B PRO 21 1 Y 1 B GLU 332 B GLU 22 1 Y 1 B GLU 333 B GLU 23 1 Y 1 B LEU 334 B LEU 24 1 Y 1 B ALA 335 B ALA 25 1 Y 1 B VAL 336 B VAL 26 1 Y 1 B ASN 337 B ASN 27 1 Y 1 B ASN 338 B ASN 28 1 Y 1 B SER 521 B SER 71 1 Y 1 B LEU 522 B LEU 72 1 Y 1 B ASN 523 B ASN 73 1 Y 1 B ILE 524 B ILE 74 1 Y 1 B ALA 525 B ALA 75 1 Y 1 B ASP 526 B ASP 76 1 Y 1 B ASN 527 B ASN 77 1 Y 1 B ASN 528 B ASN 78 1 Y 1 B ARG 529 B ARG 79 1 Y 1 B VAL 530 B VAL 80 1 Y 1 B ARG 531 B ARG 81 1 Y 1 B GLU 532 B GLU 82 1 Y 1 B GLU 533 B GLU 83 1 Y 1 B GLY 534 B GLY 84 1 Y 1 B GLY 535 B GLY 85 1 Y 1 B GLY 536 B GLY 86 1 Y 1 B GLY 537 B GLY 87 1 Y 1 B GLY 538 B GLY 88 1 Y 1 B GLY 539 B GLY 89 1 Y 1 B GLY 540 B GLY 90 1 Y 1 B SER 541 B SER 91 1 Y 1 B SER 542 B SER 92 1 Y 1 B GLY 543 B GLY 93 1 Y 1 B SER 544 B SER 94 1 Y 1 B SER 545 B SER 95 1 Y 1 B GLY 546 B GLY 96 1 Y 1 B GLY 547 B GLY 97 1 Y 1 B SER 548 B SER 98 1 Y 1 B GLY 549 B GLY 99 1 Y 1 B GLY 550 B GLY 100 1 Y 1 B GLY 551 B GLY 101 1 Y 1 B SER 552 B SER 102 1 Y 1 B GLY 553 B GLY 103 1 Y 1 B SER 554 B SER 104 1 Y 1 B SER 555 B SER 105 1 Y 1 B SER 556 B SER 106 1 Y 1 B GLY 557 B GLY 107 1 Y 1 B GLY 558 B GLY 108 1 Y 1 B GLY 559 B GLY 109 1 Y 1 B GLY 560 B GLY 110 1 Y 1 B GLY 561 B GLY 111 1 Y 1 B SER 562 B SER 112 1 Y 1 B GLY 563 B GLY 113 1 Y 1 B GLY 564 B GLY 114 1 Y 1 B GLY 565 B GLY 115 1 Y 1 B SER 566 B SER 116 1 Y 1 B GLY 567 B GLY 117 1 Y 1 B GLY 568 B GLY 118 1 Y 1 B GLY 569 B GLY 119 1 Y 1 B GLY 570 B GLY 120 1 Y 1 B GLY 571 B GLY 121 1 Y 1 B GLY 572 B GLY 122 1 Y 1 B LYS 600 B LYS 150 1 Y 1 A GLU 50 -34.83 123.20 1 A ASP 85 B -95.01 32.31 1 A ALA 107 -67.61 -139.58 1 A ARG 109 -58.90 -178.00 1 A PRO 112 -56.54 -7.04 1 A GLU 133 -104.83 66.68 1 A ASP 147 -109.72 67.36 1 B ILE 343 -74.29 -75.59 1 B TRP 345 -100.44 45.05 1 B MET 348 47.50 72.17 1 B CYS 356 -48.58 -6.86 1 B ASP 372 -172.28 132.91 1 B CYS 378 -113.43 -101.10 1 B ARG 379 -146.58 -32.37 108.620 61.0837 35.140 7.2450 0.0000 -0.0000 7.2450 0.0000 -14.4900 0.2810 0.2259 0.2302 2.3 39.123 1000 12488 12488 8.0100 96.97 1.000 0.280 0.7449 0.4100 RANDOM 1 1.350 MOLECULAR REPLACEMENT 30.2900 0.9000 1.1100 PDB ENTRY 3H8K ML FLAT BULK SOLVENT MODEL 49.3680 0.3340 2.3 39.123 39 1836 14 0 1783 0.009 1843 1.220 2489 0.083 262 0.006 326 19.349 703 0.3746 0.3004 2.4184 126 1445 1571 1571 7 88.0000 0.3614 0.2870 2.5698 134 1530 1664 1664 7 93.0000 0.3904 0.2832 2.7682 145 1671 1816 1816 7 100.0000 0.3313 0.2701 3.0467 143 1653 1796 1796 7 100.0000 0.2772 0.2426 3.4873 146 1676 1822 1822 7 100.0000 0.2658 0.1849 4.3927 149 1708 1857 1857 7 100.0000 0.2186 0.1905 39.1291 157 1805 1962 1962 7 98.0000 2.300 40.000 4LAD 12528 12528 -6 -3 0.044 1.071 1 18.400 8.200 96.900 0.396 2.300 2.380 2.6 1132 1.054 1 4.700 90.300 0.299 2.380 2.480 4.7 1083 1.036 1 5.500 86.200 0.313 2.480 2.590 6.6 1223 1.011 1 7.600 97.000 0.231 2.590 2.730 9.6 1254 0.943 1 8.900 99.900 0.147 2.730 2.900 18.3 1265 1.049 1 9.400 100.000 0.085 2.900 3.120 30.3 1273 1.056 1 9.500 100.000 0.062 3.120 3.440 35.9 1301 1.067 1 9.300 99.800 0.046 3.440 3.930 37.6 1291 1.060 1 8.900 99.800 0.030 3.930 4.950 57.8 1314 1.159 1 9.000 99.200 0.027 4.950 40.000 54.2 1392 1.230 1 8.400 96.000 data reduction Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ DENZO package data scaling Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ SCALEPACK package phasing Randy J. Read cimr-phaser@lists.cam.ac.uk http://www-structmed.cimr.cam.ac.uk/phaser/ PHASER program refinement Paul D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data reduction HKL-3000 data scaling HKL-3000 Crystal Structure of the Ube2g2:RING-G2BR complex 1 N N 2 N N 3 N N 3 N N 4 N N 4 N N 5 N N 5 N N A GLY 3 A GLY 3 HELX_P A ASN 19 A ASN 19 1 1 17 A ILE 90 A ILE 90 HELX_P A HIS 94 A HIS 94 5 2 5 A SER 115 A SER 115 HELX_P A GLU 129 A GLU 129 1 3 15 A ASN 137 A ASN 137 HELX_P A ASP 146 A ASP 146 1 4 10 A ASP 147 A ASP 147 HELX_P A LEU 163 A LEU 163 1 5 17 B ASN 362 B ASN 52 HELX_P B GLU 370 B GLU 60 1 6 9 B SER 574 B SER 124 HELX_P B LEU 598 B LEU 148 1 7 25 metalc 2.533 B CYS 356 B SG CYS 46 1_555 B ZN 702 D ZN ZN 1_555 metalc 2.319 B HIS 358 B ND1 HIS 48 1_555 B ZN 702 D ZN ZN 1_555 metalc 2.352 B HIS 361 B ND1 HIS 51 1_555 B ZN 701 C ZN ZN 1_555 metalc 2.409 B CYS 364 B SG CYS 54 1_555 B ZN 701 C ZN ZN 1_555 metalc 2.419 B CYS 375 B SG CYS 65 1_555 B ZN 702 D ZN ZN 1_555 metalc 2.488 B CYS 378 B SG CYS 68 1_555 B ZN 702 D ZN ZN 1_555 LIGASE/LIGASE E2:E3 complex, LIGASE-LIGASE complex A TYR 64 A TYR 64 1 A PRO 65 A PRO 65 1.25 UB2G2_HUMAN UNP 1 1 P60604 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP NIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQ KSLGL AMFR_HUMAN UNP 2 313 Q9UKV5 KNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVRE E AMFR_HUMAN UNP 2 574 Q9UKV5 SADERQRMLVQRKDELLQQARKRFLNK 1 165 4LAD 1 165 P60604 A 1 1 165 313 393 4LAD 313 533 Q9UKV5 B 2 3 83 574 600 4LAD 574 600 Q9UKV5 B 3 124 150 2 expression tag HIS 311 4LAD B Q9UKV5 UNP 1 2 expression tag MET 312 4LAD B Q9UKV5 UNP 2 2 linker GLY 534 4LAD B Q9UKV5 UNP 84 2 linker GLY 535 4LAD B Q9UKV5 UNP 85 2 linker GLY 536 4LAD B Q9UKV5 UNP 86 2 linker GLY 537 4LAD B Q9UKV5 UNP 87 2 linker GLY 538 4LAD B Q9UKV5 UNP 88 2 linker GLY 539 4LAD B Q9UKV5 UNP 89 2 linker GLY 540 4LAD B Q9UKV5 UNP 90 2 linker SER 541 4LAD B Q9UKV5 UNP 91 2 linker SER 542 4LAD B Q9UKV5 UNP 92 2 linker GLY 543 4LAD B Q9UKV5 UNP 93 2 linker SER 544 4LAD B Q9UKV5 UNP 94 2 linker SER 545 4LAD B Q9UKV5 UNP 95 2 linker GLY 546 4LAD B Q9UKV5 UNP 96 2 linker GLY 547 4LAD B Q9UKV5 UNP 97 2 linker SER 548 4LAD B Q9UKV5 UNP 98 2 linker GLY 549 4LAD B Q9UKV5 UNP 99 2 linker GLY 550 4LAD B Q9UKV5 UNP 100 2 linker GLY 551 4LAD B Q9UKV5 UNP 101 2 linker SER 552 4LAD B Q9UKV5 UNP 102 2 linker GLY 553 4LAD B Q9UKV5 UNP 103 2 linker SER 554 4LAD B Q9UKV5 UNP 104 2 linker SER 555 4LAD B Q9UKV5 UNP 105 2 linker SER 556 4LAD B Q9UKV5 UNP 106 2 linker GLY 557 4LAD B Q9UKV5 UNP 107 2 linker GLY 558 4LAD B Q9UKV5 UNP 108 2 linker GLY 559 4LAD B Q9UKV5 UNP 109 2 linker GLY 560 4LAD B Q9UKV5 UNP 110 2 linker GLY 561 4LAD B Q9UKV5 UNP 111 2 linker SER 562 4LAD B Q9UKV5 UNP 112 2 linker GLY 563 4LAD B Q9UKV5 UNP 113 2 linker GLY 564 4LAD B Q9UKV5 UNP 114 2 linker GLY 565 4LAD B Q9UKV5 UNP 115 2 linker SER 566 4LAD B Q9UKV5 UNP 116 2 linker GLY 567 4LAD B Q9UKV5 UNP 117 2 linker GLY 568 4LAD B Q9UKV5 UNP 118 2 linker GLY 569 4LAD B Q9UKV5 UNP 119 2 linker GLY 570 4LAD B Q9UKV5 UNP 120 2 linker GLY 571 4LAD B Q9UKV5 UNP 121 2 linker GLY 572 4LAD B Q9UKV5 UNP 122 2 linker GLY 573 4LAD B Q9UKV5 UNP 123 4 2 anti-parallel anti-parallel anti-parallel anti-parallel A ILE 24 A ILE 24 A PRO 28 A PRO 28 A GLU 36 A GLU 36 A MET 42 A MET 42 A VAL 53 A VAL 53 A SER 59 A SER 59 A LYS 70 A LYS 70 A PHE 73 A PHE 73 B ALA 351 B ALA 41 B LYS 353 B LYS 43 B LEU 359 B LEU 49 B HIS 361 B HIS 51 BINDING SITE FOR RESIDUE ZN B 701 B ZN 701 Software 4 BINDING SITE FOR RESIDUE ZN B 702 B ZN 702 Software 4 BINDING SITE FOR RESIDUE OXL B 703 B OXL 703 Software 1 BINDING SITE FOR RESIDUE OXL B 704 B OXL 704 Software 1 B CYS 341 B CYS 31 4 7_555 B CYS 344 B CYS 34 4 7_555 B HIS 361 B HIS 51 4 1_555 B CYS 364 B CYS 54 4 1_555 B CYS 356 B CYS 46 4 1_555 B HIS 358 B HIS 48 4 1_555 B CYS 375 B CYS 65 4 1_555 B CYS 378 B CYS 68 4 1_555 B ASP 340 B ASP 30 1 1_555 B HOH 812 H HOH 1 1_555 92 P 41 21 2