0.015782 0.000000 0.001680 0.000000 0.010930 0.000000 0.000000 0.000000 0.020942 0.00000 0.00000 0.00000 Bornholdt, Z.A. Ableson, D.M. Saphire, E.O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 96.08 90.00 63.364 91.494 48.021 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 154 763 774 10.1016/j.cell.2013.07.015 23953110 Structural Rearrangement of Ebola Virus VP40 Begets Multiple Functions in the Virus Life Cycle. 2013 10.2210/pdb4ld8/pdb pdb_00004ld8 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 85 1 CCD 2010-04-10 ADSC QUANTUM 315r Rosenbaum-Rock high-resolution double-crystal monochromator: LN2 cooled first crystal, sagittal focusing 2nd crystal SINGLE WAVELENGTH M x-ray 1 0.97929 1.0 19-ID APS 0.97929 SYNCHROTRON APS BEAMLINE 19-ID 32603.617 Matrix protein VP40 UNP residues 44-326 1 man polymer 18.015 water 135 nat water Membrane-associated protein VP40 no no MAHHHHHHVDDDDKMDTPSNSMRPVADDNIDHTSHTPNGVASAFILEATVNVISGPKVLMKQIPIWLPLGIADQKTYSFD STTAAIMLASYTITHFGKANNPLVRVNRLGQGIPDHPLRLLRMGNQAFLQEFVLPPVQLPQYFTFDLTALKLVTQPLPAA TWTDETPSNLSGALRPGLSFHPKLRPVLLPGKTGKKGHVSDLTAPDKIQTIVNLMQDFKIVPIDPAKSIIGIEVPELLVH KLTGKKMSQKNGQPIIPVLLPKYIGLDPISPGDLTMVITPDYDDCHSPASCSYLSEK MAHHHHHHVDDDDKMDTPSNSMRPVADDNIDHTSHTPNGVASAFILEATVNVISGPKVLMKQIPIWLPLGIADQKTYSFD STTAAIMLASYTITHFGKANNPLVRVNRLGQGIPDHPLRLLRMGNQAFLQEFVLPPVQLPQYFTFDLTALKLVTQPLPAA TWTDETPSNLSGALRPGLSFHPKLRPVLLPGKTGKKGHVSDLTAPDKIQTIVNLMQDFKIVPIDPAKSIIGIEVPELLVH KLTGKKMSQKNGQPIIPVLLPKYIGLDPISPGDLTMVITPDYDDCHSPASCSYLSEK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n SEBOV sample VP40 186540 Sudan ebolavirus 562 Escherichia coli 1 2.12 42.05 VAPOR DIFFUSION, HANGING DROP 7.5 25% PEG400, 0.2 M magnesium chloride, 0.1 M HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K 293.0 chem_comp_atom chem_comp_bond database_2 struct_ref_seq_dif repository Initial release Database references Data collection Database references 1 0 2013-08-21 1 1 2013-09-04 1 2 2024-02-28 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details RCSB Y RCSB 2013-06-24 REL REL HOH water HOH 1 2 HOH HOH 401 A HOH 2 2 HOH HOH 402 A HOH 3 2 HOH HOH 403 A HOH 4 2 HOH HOH 404 A HOH 5 2 HOH HOH 405 A HOH 6 2 HOH HOH 406 A HOH 7 2 HOH HOH 407 A HOH 8 2 HOH HOH 408 A HOH 9 2 HOH HOH 409 A HOH 10 2 HOH HOH 410 A HOH 11 2 HOH HOH 411 A HOH 12 2 HOH HOH 412 A HOH 13 2 HOH HOH 413 A HOH 14 2 HOH HOH 414 A HOH 15 2 HOH HOH 415 A HOH 16 2 HOH HOH 416 A HOH 17 2 HOH HOH 417 A HOH 18 2 HOH HOH 418 A HOH 19 2 HOH HOH 419 A HOH 20 2 HOH HOH 420 A HOH 21 2 HOH HOH 421 A HOH 22 2 HOH HOH 422 A HOH 23 2 HOH HOH 423 A HOH 24 2 HOH HOH 424 A HOH 25 2 HOH HOH 425 A HOH 26 2 HOH HOH 426 A HOH 27 2 HOH HOH 427 A HOH 28 2 HOH HOH 428 A HOH 29 2 HOH HOH 429 A HOH 30 2 HOH HOH 430 A HOH 31 2 HOH HOH 431 A HOH 32 2 HOH HOH 432 A HOH 33 2 HOH HOH 433 A HOH 34 2 HOH HOH 434 A HOH 35 2 HOH HOH 435 A HOH 36 2 HOH HOH 436 A HOH 37 2 HOH HOH 437 A HOH 38 2 HOH HOH 438 A HOH 39 2 HOH HOH 439 A HOH 40 2 HOH HOH 440 A HOH 41 2 HOH HOH 441 A HOH 42 2 HOH HOH 442 A HOH 43 2 HOH HOH 443 A HOH 44 2 HOH HOH 444 A HOH 45 2 HOH HOH 445 A HOH 46 2 HOH HOH 446 A HOH 47 2 HOH HOH 447 A HOH 48 2 HOH HOH 448 A HOH 49 2 HOH HOH 449 A HOH 50 2 HOH HOH 450 A HOH 51 2 HOH HOH 451 A HOH 52 2 HOH HOH 452 A HOH 53 2 HOH HOH 453 A HOH 54 2 HOH HOH 454 A HOH 55 2 HOH HOH 455 A HOH 56 2 HOH HOH 456 A HOH 57 2 HOH HOH 457 A HOH 58 2 HOH HOH 458 A HOH 59 2 HOH HOH 459 A HOH 60 2 HOH HOH 460 A HOH 61 2 HOH HOH 461 A HOH 62 2 HOH HOH 462 A HOH 63 2 HOH HOH 463 A HOH 64 2 HOH HOH 464 A HOH 65 2 HOH HOH 465 A HOH 66 2 HOH HOH 466 A HOH 67 2 HOH HOH 467 A HOH 68 2 HOH HOH 468 A HOH 69 2 HOH HOH 469 A HOH 70 2 HOH HOH 470 A HOH 71 2 HOH HOH 471 A HOH 72 2 HOH HOH 472 A HOH 73 2 HOH HOH 473 A HOH 74 2 HOH HOH 474 A HOH 75 2 HOH HOH 475 A HOH 76 2 HOH HOH 476 A HOH 77 2 HOH HOH 477 A HOH 78 2 HOH HOH 478 A HOH 79 2 HOH HOH 479 A HOH 80 2 HOH HOH 480 A HOH 81 2 HOH HOH 481 A HOH 82 2 HOH HOH 482 A HOH 83 2 HOH HOH 483 A HOH 84 2 HOH HOH 484 A HOH 85 2 HOH HOH 485 A HOH 86 2 HOH HOH 486 A HOH 87 2 HOH HOH 487 A HOH 88 2 HOH HOH 488 A HOH 89 2 HOH HOH 489 A HOH 90 2 HOH HOH 490 A HOH 91 2 HOH HOH 491 A HOH 92 2 HOH HOH 492 A HOH 93 2 HOH HOH 493 A HOH 94 2 HOH HOH 494 A HOH 95 2 HOH HOH 495 A HOH 96 2 HOH HOH 496 A HOH 97 2 HOH HOH 497 A HOH 98 2 HOH HOH 498 A HOH 99 2 HOH HOH 499 A HOH 100 2 HOH HOH 500 A HOH 101 2 HOH HOH 501 A HOH 102 2 HOH HOH 502 A HOH 103 2 HOH HOH 503 A HOH 104 2 HOH HOH 504 A HOH 105 2 HOH HOH 505 A HOH 106 2 HOH HOH 506 A HOH 107 2 HOH HOH 507 A HOH 108 2 HOH HOH 508 A HOH 109 2 HOH HOH 509 A HOH 110 2 HOH HOH 510 A HOH 111 2 HOH HOH 511 A HOH 112 2 HOH HOH 512 A HOH 113 2 HOH HOH 513 A HOH 114 2 HOH HOH 514 A HOH 115 2 HOH HOH 515 A HOH 116 2 HOH HOH 516 A HOH 117 2 HOH HOH 517 A HOH 118 2 HOH HOH 518 A HOH 119 2 HOH HOH 519 A HOH 120 2 HOH HOH 520 A HOH 121 2 HOH HOH 521 A HOH 122 2 HOH HOH 522 A HOH 123 2 HOH HOH 523 A HOH 124 2 HOH HOH 524 A HOH 125 2 HOH HOH 525 A HOH 126 2 HOH HOH 526 A HOH 127 2 HOH HOH 527 A HOH 128 2 HOH HOH 528 A HOH 129 2 HOH HOH 529 A HOH 130 2 HOH HOH 530 A HOH 131 2 HOH HOH 531 A HOH 132 2 HOH HOH 532 A HOH 133 2 HOH HOH 533 A HOH 134 2 HOH HOH 534 A HOH 135 2 HOH HOH 535 A n 1 30 A n 2 31 A n 3 32 A n 4 33 A n 5 34 A n 6 35 A n 7 36 A n 8 37 A n 9 38 A n 10 39 A n 11 40 A n 12 41 A n 13 42 A n 14 43 A MET 44 n 15 MET 44 A ASP 45 n 16 ASP 45 A THR 46 n 17 THR 46 A PRO 47 n 18 PRO 47 A SER 48 n 19 SER 48 A ASN 49 n 20 ASN 49 A SER 50 n 21 SER 50 A MET 51 n 22 MET 51 A ARG 52 n 23 ARG 52 A PRO 53 n 24 PRO 53 A VAL 54 n 25 VAL 54 A ALA 55 n 26 ALA 55 A ASP 56 n 27 ASP 56 A ASP 57 n 28 ASP 57 A ASN 58 n 29 ASN 58 A ILE 59 n 30 ILE 59 A ASP 60 n 31 ASP 60 A HIS 61 n 32 HIS 61 A THR 62 n 33 THR 62 A SER 63 n 34 SER 63 A HIS 64 n 35 HIS 64 A THR 65 n 36 THR 65 A PRO 66 n 37 PRO 66 A ASN 67 n 38 ASN 67 A GLY 68 n 39 GLY 68 A VAL 69 n 40 VAL 69 A ALA 70 n 41 ALA 70 A SER 71 n 42 SER 71 A ALA 72 n 43 ALA 72 A PHE 73 n 44 PHE 73 A ILE 74 n 45 ILE 74 A LEU 75 n 46 LEU 75 A GLU 76 n 47 GLU 76 A ALA 77 n 48 ALA 77 A THR 78 n 49 THR 78 A VAL 79 n 50 VAL 79 A ASN 80 n 51 ASN 80 A VAL 81 n 52 VAL 81 A ILE 82 n 53 ILE 82 A SER 83 n 54 SER 83 A GLY 84 n 55 GLY 84 A PRO 85 n 56 PRO 85 A LYS 86 n 57 LYS 86 A VAL 87 n 58 VAL 87 A LEU 88 n 59 LEU 88 A MET 89 n 60 MET 89 A LYS 90 n 61 LYS 90 A GLN 91 n 62 GLN 91 A ILE 92 n 63 ILE 92 A PRO 93 n 64 PRO 93 A ILE 94 n 65 ILE 94 A TRP 95 n 66 TRP 95 A LEU 96 n 67 LEU 96 A PRO 97 n 68 PRO 97 A LEU 98 n 69 LEU 98 A GLY 99 n 70 GLY 99 A ILE 100 n 71 ILE 100 A ALA 101 n 72 ALA 101 A ASP 102 n 73 ASP 102 A GLN 103 n 74 GLN 103 A LYS 104 n 75 LYS 104 A THR 105 n 76 THR 105 A TYR 106 n 77 TYR 106 A SER 107 n 78 SER 107 A PHE 108 n 79 PHE 108 A ASP 109 n 80 ASP 109 A SER 110 n 81 SER 110 A THR 111 n 82 THR 111 A THR 112 n 83 THR 112 A ALA 113 n 84 ALA 113 A ALA 114 n 85 ALA 114 A ILE 115 n 86 ILE 115 A MET 116 n 87 MET 116 A LEU 117 n 88 LEU 117 A ALA 118 n 89 ALA 118 A SER 119 n 90 SER 119 A TYR 120 n 91 TYR 120 A THR 121 n 92 THR 121 A ILE 122 n 93 ILE 122 A THR 123 n 94 THR 123 A HIS 124 n 95 HIS 124 A PHE 125 n 96 PHE 125 A GLY 126 n 97 GLY 126 A LYS 127 n 98 LYS 127 A ALA 128 n 99 ALA 128 A ASN 129 n 100 ASN 129 A ASN 130 n 101 ASN 130 A PRO 131 n 102 PRO 131 A LEU 132 n 103 LEU 132 A VAL 133 n 104 VAL 133 A ARG 134 n 105 ARG 134 A VAL 135 n 106 VAL 135 A ASN 136 n 107 ASN 136 A ARG 137 n 108 ARG 137 A LEU 138 n 109 LEU 138 A GLY 139 n 110 GLY 139 A GLN 140 n 111 GLN 140 A GLY 141 n 112 GLY 141 A ILE 142 n 113 ILE 142 A PRO 143 n 114 PRO 143 A ASP 144 n 115 ASP 144 A HIS 145 n 116 HIS 145 A PRO 146 n 117 PRO 146 A LEU 147 n 118 LEU 147 A ARG 148 n 119 ARG 148 A LEU 149 n 120 LEU 149 A LEU 150 n 121 LEU 150 A ARG 151 n 122 ARG 151 A MET 152 n 123 MET 152 A GLY 153 n 124 GLY 153 A ASN 154 n 125 ASN 154 A GLN 155 n 126 GLN 155 A ALA 156 n 127 ALA 156 A PHE 157 n 128 PHE 157 A LEU 158 n 129 LEU 158 A GLN 159 n 130 GLN 159 A GLU 160 n 131 GLU 160 A PHE 161 n 132 PHE 161 A VAL 162 n 133 VAL 162 A LEU 163 n 134 LEU 163 A PRO 164 n 135 PRO 164 A PRO 165 n 136 PRO 165 A VAL 166 n 137 VAL 166 A GLN 167 n 138 GLN 167 A LEU 168 n 139 LEU 168 A PRO 169 n 140 PRO 169 A GLN 170 n 141 GLN 170 A TYR 171 n 142 TYR 171 A PHE 172 n 143 PHE 172 A THR 173 n 144 THR 173 A PHE 174 n 145 PHE 174 A ASP 175 n 146 ASP 175 A LEU 176 n 147 LEU 176 A THR 177 n 148 THR 177 A ALA 178 n 149 ALA 178 A LEU 179 n 150 LEU 179 A LYS 180 n 151 LYS 180 A LEU 181 n 152 LEU 181 A VAL 182 n 153 VAL 182 A THR 183 n 154 THR 183 A GLN 184 n 155 GLN 184 A PRO 185 n 156 PRO 185 A LEU 186 n 157 LEU 186 A PRO 187 n 158 PRO 187 A ALA 188 n 159 ALA 188 A ALA 189 n 160 ALA 189 A THR 190 n 161 THR 190 A TRP 191 n 162 TRP 191 A THR 192 n 163 THR 192 A ASP 193 n 164 ASP 193 A n 165 194 A n 166 195 A n 167 196 A n 168 197 A n 169 198 A n 170 199 A n 171 200 A n 172 201 A n 173 202 A LEU 203 n 174 LEU 203 A ARG 204 n 175 ARG 204 A PRO 205 n 176 PRO 205 A GLY 206 n 177 GLY 206 A LEU 207 n 178 LEU 207 A SER 208 n 179 SER 208 A PHE 209 n 180 PHE 209 A HIS 210 n 181 HIS 210 A PRO 211 n 182 PRO 211 A LYS 212 n 183 LYS 212 A LEU 213 n 184 LEU 213 A ARG 214 n 185 ARG 214 A PRO 215 n 186 PRO 215 A VAL 216 n 187 VAL 216 A LEU 217 n 188 LEU 217 A LEU 218 n 189 LEU 218 A PRO 219 n 190 PRO 219 A GLY 220 n 191 GLY 220 A LYS 221 n 192 LYS 221 A n 193 222 A n 194 223 A n 195 224 A n 196 225 A n 197 226 A n 198 227 A n 199 228 A n 200 229 A n 201 230 A n 202 231 A n 203 232 A n 204 233 A n 205 234 A ASP 235 n 206 ASP 235 A LYS 236 n 207 LYS 236 A ILE 237 n 208 ILE 237 A GLN 238 n 209 GLN 238 A THR 239 n 210 THR 239 A ILE 240 n 211 ILE 240 A VAL 241 n 212 VAL 241 A ASN 242 n 213 ASN 242 A LEU 243 n 214 LEU 243 A MET 244 n 215 MET 244 A GLN 245 n 216 GLN 245 A ASP 246 n 217 ASP 246 A PHE 247 n 218 PHE 247 A LYS 248 n 219 LYS 248 A ILE 249 n 220 ILE 249 A VAL 250 n 221 VAL 250 A PRO 251 n 222 PRO 251 A ILE 252 n 223 ILE 252 A ASP 253 n 224 ASP 253 A PRO 254 n 225 PRO 254 A ALA 255 n 226 ALA 255 A LYS 256 n 227 LYS 256 A SER 257 n 228 SER 257 A ILE 258 n 229 ILE 258 A ILE 259 n 230 ILE 259 A GLY 260 n 231 GLY 260 A ILE 261 n 232 ILE 261 A GLU 262 n 233 GLU 262 A VAL 263 n 234 VAL 263 A PRO 264 n 235 PRO 264 A GLU 265 n 236 GLU 265 A LEU 266 n 237 LEU 266 A LEU 267 n 238 LEU 267 A VAL 268 n 239 VAL 268 A HIS 269 n 240 HIS 269 A LYS 270 n 241 LYS 270 A LEU 271 n 242 LEU 271 A THR 272 n 243 THR 272 A GLY 273 n 244 GLY 273 A LYS 274 n 245 LYS 274 A LYS 275 n 246 LYS 275 A n 247 276 A n 248 277 A n 249 278 A LYS 279 n 250 LYS 279 A ASN 280 n 251 ASN 280 A GLY 281 n 252 GLY 281 A GLN 282 n 253 GLN 282 A PRO 283 n 254 PRO 283 A ILE 284 n 255 ILE 284 A ILE 285 n 256 ILE 285 A PRO 286 n 257 PRO 286 A VAL 287 n 258 VAL 287 A LEU 288 n 259 LEU 288 A LEU 289 n 260 LEU 289 A PRO 290 n 261 PRO 290 A LYS 291 n 262 LYS 291 A TYR 292 n 263 TYR 292 A ILE 293 n 264 ILE 293 A GLY 294 n 265 GLY 294 A n 266 295 A n 267 296 A n 268 297 A n 269 298 A n 270 299 A PRO 300 n 271 PRO 300 A GLY 301 n 272 GLY 301 A ASP 302 n 273 ASP 302 A LEU 303 n 274 LEU 303 A THR 304 n 275 THR 304 A MET 305 n 276 MET 305 A VAL 306 n 277 VAL 306 A ILE 307 n 278 ILE 307 A THR 308 n 279 THR 308 A n 280 309 A n 281 310 A n 282 311 A n 283 312 A n 284 313 A n 285 314 A n 286 315 A n 287 316 A n 288 317 A n 289 318 A n 290 319 A n 291 320 A n 292 321 A n 293 322 A n 294 323 A n 295 324 A n 296 325 A n 297 326 A 1.7117 0.7456 0.4395 2.8034 0.1713 1.5748 -0.0492 -0.0110 0.0792 -0.1264 -0.0175 0.3171 0.0656 -0.1397 0.0738 0.2385 0.0039 -0.0136 0.2187 -0.0064 0.2348 refined 16.8957 24.8195 17.4105 X-RAY DIFFRACTION 2.2199 0.0597 0.2743 1.2556 0.0332 1.2423 -0.0524 -0.4089 -0.0245 0.1726 -0.0054 0.5575 -0.2475 -0.4864 0.0776 0.4003 0.0662 -0.0632 0.4755 0.0873 0.5073 refined 11.5144 40.2841 3.9637 X-RAY DIFFRACTION 1.5333 -0.8343 -0.0663 3.0703 -1.2414 1.8330 0.0085 0.3464 0.1404 -0.5753 -0.0177 0.1674 0.1615 -0.1274 -0.0099 0.4687 -0.0302 -0.0825 0.3980 0.0534 0.3641 refined 15.1625 40.3573 -2.1067 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 chain 'A' and (resid 44 through 185 ) X-RAY DIFFRACTION 2 chain 'A' and (resid 186 through 235 ) X-RAY DIFFRACTION 3 chain 'A' and (resid 236 through 308 ) author_and_software_defined_assembly PISA 2 dimeric 1690 -10 22630 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 2_656 -x+1,y,-z+1 crystal symmetry operation 58.2777609220 0.0000000000 47.7508807567 A N VAL 54 A N VAL 25 A O LEU 181 A O LEU 152 A O THR 173 A O THR 144 A N ILE 82 A N ILE 53 A N ALA 77 A N ALA 48 A O ILE 94 A O ILE 65 A N PHE 125 A N PHE 96 A O LEU 132 A O LEU 103 A N VAL 135 A N VAL 106 A O GLN 155 A O GLN 126 A O VAL 216 A O VAL 187 A N LEU 207 A N LEU 178 A N SER 208 A N SER 179 A O THR 304 A O THR 275 A N LYS 248 A N LYS 219 A O GLU 262 A O GLU 233 A N ILE 259 A N ILE 230 A O VAL 287 A O VAL 258 1 A HOH 518 B HOH 1 A MET 30 A MET 1 1 Y 1 A ALA 31 A ALA 2 1 Y 1 A HIS 32 A HIS 3 1 Y 1 A HIS 33 A HIS 4 1 Y 1 A HIS 34 A HIS 5 1 Y 1 A HIS 35 A HIS 6 1 Y 1 A HIS 36 A HIS 7 1 Y 1 A HIS 37 A HIS 8 1 Y 1 A VAL 38 A VAL 9 1 Y 1 A ASP 39 A ASP 10 1 Y 1 A ASP 40 A ASP 11 1 Y 1 A ASP 41 A ASP 12 1 Y 1 A ASP 42 A ASP 13 1 Y 1 A LYS 43 A LYS 14 1 Y 1 A GLU 194 A GLU 165 1 Y 1 A THR 195 A THR 166 1 Y 1 A PRO 196 A PRO 167 1 Y 1 A SER 197 A SER 168 1 Y 1 A ASN 198 A ASN 169 1 Y 1 A LEU 199 A LEU 170 1 Y 1 A SER 200 A SER 171 1 Y 1 A GLY 201 A GLY 172 1 Y 1 A ALA 202 A ALA 173 1 Y 1 A THR 222 A THR 193 1 Y 1 A GLY 223 A GLY 194 1 Y 1 A LYS 224 A LYS 195 1 Y 1 A LYS 225 A LYS 196 1 Y 1 A GLY 226 A GLY 197 1 Y 1 A HIS 227 A HIS 198 1 Y 1 A VAL 228 A VAL 199 1 Y 1 A SER 229 A SER 200 1 Y 1 A ASP 230 A ASP 201 1 Y 1 A LEU 231 A LEU 202 1 Y 1 A THR 232 A THR 203 1 Y 1 A ALA 233 A ALA 204 1 Y 1 A PRO 234 A PRO 205 1 Y 1 A MET 276 A MET 247 1 Y 1 A SER 277 A SER 248 1 Y 1 A GLN 278 A GLN 249 1 Y 1 A LEU 295 A LEU 266 1 Y 1 A ASP 296 A ASP 267 1 Y 1 A PRO 297 A PRO 268 1 Y 1 A ILE 298 A ILE 269 1 Y 1 A SER 299 A SER 270 1 Y 1 A PRO 309 A PRO 280 1 Y 1 A ASP 310 A ASP 281 1 Y 1 A TYR 311 A TYR 282 1 Y 1 A ASP 312 A ASP 283 1 Y 1 A ASP 313 A ASP 284 1 Y 1 A CYS 314 A CYS 285 1 Y 1 A HIS 315 A HIS 286 1 Y 1 A SER 316 A SER 287 1 Y 1 A PRO 317 A PRO 288 1 Y 1 A ALA 318 A ALA 289 1 Y 1 A SER 319 A SER 290 1 Y 1 A CYS 320 A CYS 291 1 Y 1 A SER 321 A SER 292 1 Y 1 A TYR 322 A TYR 293 1 Y 1 A LEU 323 A LEU 294 1 Y 1 A SER 324 A SER 295 1 Y 1 A GLU 325 A GLU 296 1 Y 1 A LYS 326 A LYS 297 1 Y 1 A A O O HOH HOH 484 502 1.89 1 A A OG1 O THR HOH 192 474 1.94 1 A A O O HOH HOH 504 505 1.95 1 A A O O HOH HOH 491 522 2.08 1 A A NZ O LYS HOH 256 477 2.15 1 A A O O HOH HOH 514 528 2.16 1 A A O O HOH HOH 478 495 2.08 1_555 2_656 1 A ASP 45 -98.84 38.63 1 A ASP 102 -79.33 -169.66 1 A LEU 117 -93.23 49.03 1 A ILE 252 -125.16 -55.04 0.2114 0.1827 0.1841 1.830 33.034 1219 23931 23880 5.10 99.40 0.19 RANDOM 1 1.34 MOLECULAR REPLACEMENT 26.75 0.90 1.11 ML FLAT BULK SOLVENT MODEL 1.830 33.034 135 1955 0 0 1820 0.008 1863 1.184 2539 14.095 701 0.076 305 0.005 320 0.3234 0.2868 1.9033 127 2521 100.0 0.2815 0.2502 1.9899 137 2541 99.0 0.2237 0.2144 2.0948 132 2486 100.0 0.2551 0.2109 2.2260 140 2522 100.0 0.2538 0.1976 2.3978 148 2506 100.0 0.2357 0.1980 2.6390 121 2550 100.0 0.2374 0.1942 3.0207 161 2494 100.0 0.2010 0.1768 3.8048 127 2539 100.0 0.1618 0.1535 33.0392 126 2502 97.0 1.83 33.034 4LD8 23931 23880 1.0 1.0 1 99.7 1.83 1 data collection HKL-2000 phasing PHASER refinement PHENIX (phenix.refine: dev_1389) data reduction d*TREK data scaling d*TREK Crystal Structure of Dimeric Sudan Virus VP40 1 N N 2 N N A ASP 60 A ASP 31 HELX_P A HIS 64 A HIS 35 5 1 5 A SER 107 A SER 78 HELX_P A LEU 117 A LEU 88 1 2 11 A LEU 147 A LEU 118 HELX_P A GLY 153 A GLY 124 1 3 7 A GLN 159 A GLN 130 HELX_P A LEU 163 A LEU 134 1 4 5 A LYS 236 A LYS 207 HELX_P A MET 244 A MET 215 1 5 9 A GLN 245 A GLN 216 HELX_P A PHE 247 A PHE 218 5 6 3 A PRO 254 A PRO 225 HELX_P A LYS 256 A LYS 227 5 7 3 A PRO 264 A PRO 235 HELX_P A GLY 273 A GLY 244 1 8 10 A PRO 290 A PRO 261 HELX_P A GLY 294 A GLY 265 5 9 5 VIRAL PROTEIN viral matrix protein, matrix assembly, viral budding, viral transcription regulation, VIRAL PROTEIN A THR 192 A THR 163 1 A ASP 193 A ASP 164 11.19 VP40_EBOSU UNP 1 44 Q5XX06 MDTPSNSMRPVADDNIDHTSHTPNGVASAFILEATVNVISGPKVLMKQIPIWLPLGIADQKTYSFDSTTAAIMLASYTIT HFGKANNPLVRVNRLGQGIPDHPLRLLRMGNQAFLQEFVLPPVQLPQYFTFDLTALKLVTQPLPAATWTDETPSNLSGAL RPGLSFHPKLRPVLLPGKTGKKGHVSDLTAPDKIQTIVNLMQDFKIVPIDPAKSIIGIEVPELLVHKLTGKKMSQKNGQP IIPVLLPKYIGLDPISPGDLTMVITPDYDDCHSPASCSYLSEK 44 326 4LD8 44 326 Q5XX06 A 1 15 297 1 expression tag MET 30 4LD8 A Q5XX06 UNP 1 1 expression tag ALA 31 4LD8 A Q5XX06 UNP 2 1 expression tag HIS 32 4LD8 A Q5XX06 UNP 3 1 expression tag HIS 33 4LD8 A Q5XX06 UNP 4 1 expression tag HIS 34 4LD8 A Q5XX06 UNP 5 1 expression tag HIS 35 4LD8 A Q5XX06 UNP 6 1 expression tag HIS 36 4LD8 A Q5XX06 UNP 7 1 expression tag HIS 37 4LD8 A Q5XX06 UNP 8 1 expression tag VAL 38 4LD8 A Q5XX06 UNP 9 1 expression tag ASP 39 4LD8 A Q5XX06 UNP 10 1 expression tag ASP 40 4LD8 A Q5XX06 UNP 11 1 expression tag ASP 41 4LD8 A Q5XX06 UNP 12 1 expression tag ASP 42 4LD8 A Q5XX06 UNP 13 1 expression tag LYS 43 4LD8 A Q5XX06 UNP 14 4 3 3 3 parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 54 A VAL 25 A ALA 55 A ALA 26 A THR 173 A THR 144 A PRO 185 A PRO 156 A SER 71 A SER 42 A SER 83 A SER 54 A LYS 86 A LYS 57 A ALA 101 A ALA 72 A SER 119 A SER 90 A PHE 125 A PHE 96 A LEU 132 A LEU 103 A LEU 138 A LEU 109 A ASN 154 A ASN 125 A LEU 158 A LEU 129 A VAL 216 A VAL 187 A LEU 217 A LEU 188 A PRO 205 A PRO 176 A SER 208 A SER 179 A THR 304 A THR 275 A ILE 307 A ILE 278 A LYS 248 A LYS 219 A ASP 253 A ASP 224 A ILE 258 A ILE 229 A GLU 262 A GLU 233 A ILE 284 A ILE 255 A LEU 288 A LEU 259 5 C 1 2 1