0.020427
0.000000
0.000000
0.000000
0.009581
0.000000
0.000000
0.000000
0.007315
0.00000
0.00000
0.00000
Benenato, K.
Wang, H.
Mcguire, H.M.
Davis, H.
Gao, N.
Prince, D.B.
Jahic, H.
Stokes, S.S.
Boriack-Sjodin, P.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
48.955
104.377
136.709
C8 H6 Br N3 O S
272.122
4-amino-2-bromothieno[3,2-c]pyridine-7-carboxamide
non-polymer
C2 H3 O2 -1
59.044
ACETATE ION
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C11 H16 N2 O8 P 1
335.227
BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE
NICOTINAMIDE MONONUCLEOTIDE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
C
Y
2
N
C
Y
3
N
C
Y
4
N
N
Y
5
N
C
N
6
N
C
Y
7
N
C
Y
8
N
C
Y
9
N
C
N
10
N
N
N
11
N
O
N
12
N
N
Y
13
N
S
N
14
N
BR
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
C
N
22
N
O
N
23
N
O
N
24
N
C
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
N
N
29
S
C
N
30
N
C
N
31
N
O
N
32
N
C
N
33
N
O
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
C
N
48
N
N
N
49
N
C
N
50
N
N
N
51
N
N
N
52
N
O
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
N
N
69
S
C
N
70
N
C
N
71
N
O
N
72
N
C
N
73
N
C
N
74
N
O
N
75
N
N
N
76
N
O
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
N
N
86
S
C
N
87
N
C
N
88
N
O
N
89
N
C
N
90
N
C
N
91
N
O
N
92
N
O
N
93
N
O
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
N
N
102
R
C
N
103
N
C
N
104
N
O
N
105
N
C
N
106
N
S
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
N
N
116
S
C
N
117
N
C
N
118
N
O
N
119
N
C
N
120
N
C
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
O
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
N
N
136
S
C
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
C
N
141
N
C
N
142
N
O
N
143
N
O
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
N
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
N
N
165
S
C
N
166
N
C
N
167
N
O
N
168
N
C
Y
169
N
C
Y
170
N
N
Y
171
N
C
Y
172
N
C
Y
173
N
N
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
N
N
189
S
C
N
190
N
C
N
191
N
O
N
192
S
C
N
193
N
C
N
194
N
C
N
195
N
C
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
N
N
211
S
C
N
212
N
C
N
213
N
O
N
214
N
C
N
215
N
C
N
216
N
C
N
217
N
C
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
N
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
N
N
258
S
C
N
259
N
C
N
260
N
O
N
261
N
C
N
262
N
C
N
263
N
S
N
264
N
C
N
265
N
O
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
NA
N
278
N
O
N
279
N
P
N
280
N
O
N
281
N
O
N
282
N
O
N
283
N
C
N
284
R
C
N
285
N
O
N
286
S
C
N
287
N
O
N
288
R
C
N
289
N
O
N
290
R
C
Y
291
N
N
Y
292
N
C
Y
293
N
C
N
294
N
C
N
295
N
O
N
296
N
N
Y
297
N
C
Y
298
N
C
Y
299
N
C
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
N
N
317
S
C
N
318
N
C
N
319
N
O
N
320
N
C
Y
321
N
C
Y
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
N
C
N
344
N
C
N
345
N
C
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
N
N
357
S
C
N
358
N
C
N
359
N
O
N
360
N
C
N
361
N
O
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
R
C
N
375
N
O
N
376
N
C
N
377
N
O
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
N
N
388
S
C
N
389
N
C
N
390
N
O
N
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
N
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
N
401
N
O
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
N
N
415
S
C
N
416
N
C
N
417
N
O
N
418
N
C
Y
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
N
425
N
O
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
N
N
439
S
C
N
440
N
C
N
441
N
O
N
442
N
C
N
443
N
C
N
444
N
C
N
445
N
O
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
1
N
sing
Y
2
N
doub
Y
3
N
sing
Y
4
N
sing
N
5
N
sing
N
6
N
doub
Y
7
N
doub
N
8
N
sing
Y
9
N
doub
Y
10
N
sing
Y
11
N
sing
Y
12
N
sing
Y
13
N
doub
Y
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
doub
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
doub
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
doub
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
doub
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
doub
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
doub
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
doub
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
Y
167
N
sing
Y
168
N
doub
Y
169
N
doub
N
170
N
sing
Y
171
N
sing
N
172
N
sing
Y
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
doub
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
Y
288
N
doub
Y
289
N
sing
Y
290
N
sing
N
291
N
sing
N
292
N
sing
Y
293
N
doub
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
Y
298
N
sing
N
299
N
sing
Y
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
Y
314
N
doub
Y
315
N
sing
Y
316
N
sing
N
317
N
sing
Y
318
N
doub
N
319
N
sing
Y
320
N
doub
N
321
N
sing
Y
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
Y
383
N
doub
Y
384
N
sing
Y
385
N
sing
N
386
N
sing
Y
387
N
doub
Y
388
N
sing
Y
389
N
sing
N
390
N
sing
Y
391
N
sing
Y
392
N
doub
N
393
N
sing
Y
394
N
doub
N
395
N
sing
Y
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
doub
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
Y
411
N
doub
Y
412
N
sing
Y
413
N
sing
N
414
N
sing
Y
415
N
doub
N
416
N
sing
Y
417
N
doub
N
418
N
sing
Y
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
doub
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
UK
Bioorg.Med.Chem.Lett.
BMCLE8
1127
0960-894X
24
360
366
10.1016/j.bmcl.2013.11.007
24287382
Identification through structure-based methods of a bacterial NAD(+)-dependent DNA ligase inhibitor that avoids known resistance mutations.
2014
10.2210/pdb4lh6/pdb
pdb_00004lh6
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2008-08-21
RIGAKU SATURN 944+
Ni filter
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU FR-E+ SUPERBRIGHT
36862.418
DNA ligase
6.5.1.2
Adenylation domain, UNP residues 1-323
1
man
polymer
272.122
4-amino-2-bromothieno[3,2-c]pyridine-7-carboxamide
1
syn
non-polymer
335.227
BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE
1
syn
non-polymer
59.044
ACETATE ION
1
syn
non-polymer
22.990
SODIUM ION
2
syn
non-polymer
18.015
water
260
nat
water
Polydeoxyribonucleotide synthase [NAD(+)]
no
no
MEQQPLTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVGGKVLSGFEKA
PHDIPMYSLNDGFSKEDIFAFDERVRKAIGKPVAYCCELKIDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSV
PMRLTEPISVEVRGECYMPKQSFVALNEEREENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMKAKTQ
FEALEELSAIGFRTNPERQLCQSIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFALQDELGFTVKAPRWAIAYKFPPEE
AET
MEQQPLTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVGGKVLSGFEKA
PHDIPMYSLNDGFSKEDIFAFDERVRKAIGKPVAYCCELKIDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSV
PMRLTEPISVEVRGECYMPKQSFVALNEEREENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMKAKTQ
FEALEELSAIGFRTNPERQLCQSIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFALQDELGFTVKAPRWAIAYKFPPEE
AET
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ATCC 700802 / V583
sample
ligA, EF_0722
226185
Enterococcus faecalis
469008
Escherichia coli
BL21(DE3)
1
2.37
48.07
VAPOR DIFFUSION, HANGING DROP
5.0
26-32% Peg4000, 0.2M ammonium acetate, 0.1M sodium acetate pH 5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
1
0
2013-12-25
1
1
2014-01-08
1
2
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2013-06-30
REL
REL
1X7
4-amino-2-bromothieno[3,2-c]pyridine-7-carboxamide
NMN
BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE
ACT
ACETATE ION
NA
SODIUM ION
HOH
water
INH
1
2
1X7
1X7
401
A
NMN
1
3
NMN
NMN
402
A
ACT
10
4
ACT
ACT
403
A
NA
1
5
NA
NA
404
A
NA
1
5
NA
NA
405
A
HOH
5
6
HOH
HOH
501
A
HOH
7
6
HOH
HOH
502
A
HOH
8
6
HOH
HOH
503
A
HOH
10
6
HOH
HOH
504
A
HOH
12
6
HOH
HOH
505
A
HOH
13
6
HOH
HOH
506
A
HOH
14
6
HOH
HOH
507
A
HOH
15
6
HOH
HOH
508
A
HOH
18
6
HOH
HOH
509
A
HOH
19
6
HOH
HOH
510
A
HOH
20
6
HOH
HOH
511
A
HOH
21
6
HOH
HOH
512
A
HOH
23
6
HOH
HOH
513
A
HOH
24
6
HOH
HOH
514
A
HOH
25
6
HOH
HOH
515
A
HOH
26
6
HOH
HOH
516
A
HOH
27
6
HOH
HOH
517
A
HOH
28
6
HOH
HOH
518
A
HOH
29
6
HOH
HOH
519
A
HOH
30
6
HOH
HOH
520
A
HOH
32
6
HOH
HOH
521
A
HOH
35
6
HOH
HOH
522
A
HOH
36
6
HOH
HOH
523
A
HOH
37
6
HOH
HOH
524
A
HOH
38
6
HOH
HOH
525
A
HOH
39
6
HOH
HOH
526
A
HOH
40
6
HOH
HOH
527
A
HOH
42
6
HOH
HOH
528
A
HOH
44
6
HOH
HOH
529
A
HOH
45
6
HOH
HOH
530
A
HOH
46
6
HOH
HOH
531
A
HOH
48
6
HOH
HOH
532
A
HOH
49
6
HOH
HOH
533
A
HOH
50
6
HOH
HOH
534
A
HOH
51
6
HOH
HOH
535
A
HOH
52
6
HOH
HOH
536
A
HOH
53
6
HOH
HOH
537
A
HOH
54
6
HOH
HOH
538
A
HOH
55
6
HOH
HOH
539
A
HOH
56
6
HOH
HOH
540
A
HOH
57
6
HOH
HOH
541
A
HOH
58
6
HOH
HOH
542
A
HOH
59
6
HOH
HOH
543
A
HOH
60
6
HOH
HOH
544
A
HOH
61
6
HOH
HOH
545
A
HOH
62
6
HOH
HOH
546
A
HOH
63
6
HOH
HOH
547
A
HOH
64
6
HOH
HOH
548
A
HOH
65
6
HOH
HOH
549
A
HOH
66
6
HOH
HOH
550
A
HOH
67
6
HOH
HOH
551
A
HOH
68
6
HOH
HOH
552
A
HOH
69
6
HOH
HOH
553
A
HOH
71
6
HOH
HOH
554
A
HOH
72
6
HOH
HOH
555
A
HOH
73
6
HOH
HOH
556
A
HOH
74
6
HOH
HOH
557
A
HOH
75
6
HOH
HOH
558
A
HOH
76
6
HOH
HOH
559
A
HOH
77
6
HOH
HOH
560
A
HOH
78
6
HOH
HOH
561
A
HOH
79
6
HOH
HOH
562
A
HOH
80
6
HOH
HOH
563
A
HOH
81
6
HOH
HOH
564
A
HOH
84
6
HOH
HOH
565
A
HOH
85
6
HOH
HOH
566
A
HOH
86
6
HOH
HOH
567
A
HOH
87
6
HOH
HOH
568
A
HOH
89
6
HOH
HOH
569
A
HOH
90
6
HOH
HOH
570
A
HOH
91
6
HOH
HOH
571
A
HOH
92
6
HOH
HOH
572
A
HOH
93
6
HOH
HOH
573
A
HOH
94
6
HOH
HOH
574
A
HOH
96
6
HOH
HOH
575
A
HOH
98
6
HOH
HOH
576
A
HOH
99
6
HOH
HOH
577
A
HOH
100
6
HOH
HOH
578
A
HOH
101
6
HOH
HOH
579
A
HOH
102
6
HOH
HOH
580
A
HOH
103
6
HOH
HOH
581
A
HOH
104
6
HOH
HOH
582
A
HOH
105
6
HOH
HOH
583
A
HOH
106
6
HOH
HOH
584
A
HOH
107
6
HOH
HOH
585
A
HOH
108
6
HOH
HOH
586
A
HOH
109
6
HOH
HOH
587
A
HOH
111
6
HOH
HOH
588
A
HOH
112
6
HOH
HOH
589
A
HOH
113
6
HOH
HOH
590
A
HOH
114
6
HOH
HOH
591
A
HOH
116
6
HOH
HOH
592
A
HOH
117
6
HOH
HOH
593
A
HOH
118
6
HOH
HOH
594
A
HOH
121
6
HOH
HOH
595
A
HOH
122
6
HOH
HOH
596
A
HOH
123
6
HOH
HOH
597
A
HOH
124
6
HOH
HOH
598
A
HOH
125
6
HOH
HOH
599
A
HOH
126
6
HOH
HOH
600
A
HOH
127
6
HOH
HOH
601
A
HOH
128
6
HOH
HOH
602
A
HOH
129
6
HOH
HOH
603
A
HOH
130
6
HOH
HOH
604
A
HOH
131
6
HOH
HOH
605
A
HOH
133
6
HOH
HOH
606
A
HOH
134
6
HOH
HOH
607
A
HOH
135
6
HOH
HOH
608
A
HOH
137
6
HOH
HOH
609
A
HOH
138
6
HOH
HOH
610
A
HOH
140
6
HOH
HOH
611
A
HOH
141
6
HOH
HOH
612
A
HOH
142
6
HOH
HOH
613
A
HOH
143
6
HOH
HOH
614
A
HOH
144
6
HOH
HOH
615
A
HOH
145
6
HOH
HOH
616
A
HOH
146
6
HOH
HOH
617
A
HOH
147
6
HOH
HOH
618
A
HOH
148
6
HOH
HOH
619
A
HOH
149
6
HOH
HOH
620
A
HOH
150
6
HOH
HOH
621
A
HOH
151
6
HOH
HOH
622
A
HOH
152
6
HOH
HOH
623
A
HOH
153
6
HOH
HOH
624
A
HOH
154
6
HOH
HOH
625
A
HOH
155
6
HOH
HOH
626
A
HOH
156
6
HOH
HOH
627
A
HOH
161
6
HOH
HOH
628
A
HOH
162
6
HOH
HOH
629
A
HOH
163
6
HOH
HOH
630
A
HOH
164
6
HOH
HOH
631
A
HOH
165
6
HOH
HOH
632
A
HOH
166
6
HOH
HOH
633
A
HOH
167
6
HOH
HOH
634
A
HOH
174
6
HOH
HOH
635
A
HOH
175
6
HOH
HOH
636
A
HOH
176
6
HOH
HOH
637
A
HOH
179
6
HOH
HOH
638
A
HOH
182
6
HOH
HOH
639
A
HOH
184
6
HOH
HOH
640
A
HOH
186
6
HOH
HOH
641
A
HOH
189
6
HOH
HOH
642
A
HOH
191
6
HOH
HOH
643
A
HOH
193
6
HOH
HOH
644
A
HOH
194
6
HOH
HOH
645
A
HOH
196
6
HOH
HOH
646
A
HOH
197
6
HOH
HOH
647
A
HOH
198
6
HOH
HOH
648
A
HOH
200
6
HOH
HOH
649
A
HOH
202
6
HOH
HOH
650
A
HOH
203
6
HOH
HOH
651
A
HOH
204
6
HOH
HOH
652
A
HOH
205
6
HOH
HOH
653
A
HOH
206
6
HOH
HOH
654
A
HOH
208
6
HOH
HOH
655
A
HOH
210
6
HOH
HOH
656
A
HOH
211
6
HOH
HOH
657
A
HOH
212
6
HOH
HOH
658
A
HOH
213
6
HOH
HOH
659
A
HOH
214
6
HOH
HOH
660
A
HOH
215
6
HOH
HOH
661
A
HOH
216
6
HOH
HOH
662
A
HOH
217
6
HOH
HOH
663
A
HOH
218
6
HOH
HOH
664
A
HOH
220
6
HOH
HOH
665
A
HOH
221
6
HOH
HOH
666
A
HOH
225
6
HOH
HOH
667
A
HOH
226
6
HOH
HOH
668
A
HOH
227
6
HOH
HOH
669
A
HOH
228
6
HOH
HOH
670
A
HOH
230
6
HOH
HOH
671
A
HOH
233
6
HOH
HOH
672
A
HOH
236
6
HOH
HOH
673
A
HOH
239
6
HOH
HOH
674
A
HOH
243
6
HOH
HOH
675
A
HOH
245
6
HOH
HOH
676
A
HOH
246
6
HOH
HOH
677
A
HOH
247
6
HOH
HOH
678
A
HOH
249
6
HOH
HOH
679
A
HOH
250
6
HOH
HOH
680
A
HOH
251
6
HOH
HOH
681
A
HOH
252
6
HOH
HOH
682
A
HOH
253
6
HOH
HOH
683
A
HOH
256
6
HOH
HOH
684
A
HOH
260
6
HOH
HOH
685
A
HOH
261
6
HOH
HOH
686
A
HOH
265
6
HOH
HOH
687
A
HOH
266
6
HOH
HOH
688
A
HOH
267
6
HOH
HOH
689
A
HOH
268
6
HOH
HOH
690
A
HOH
273
6
HOH
HOH
691
A
HOH
274
6
HOH
HOH
692
A
HOH
276
6
HOH
HOH
693
A
HOH
277
6
HOH
HOH
694
A
HOH
278
6
HOH
HOH
695
A
HOH
279
6
HOH
HOH
696
A
HOH
280
6
HOH
HOH
697
A
HOH
281
6
HOH
HOH
698
A
HOH
282
6
HOH
HOH
699
A
HOH
284
6
HOH
HOH
700
A
HOH
287
6
HOH
HOH
701
A
HOH
288
6
HOH
HOH
702
A
HOH
289
6
HOH
HOH
703
A
HOH
290
6
HOH
HOH
704
A
HOH
291
6
HOH
HOH
705
A
HOH
292
6
HOH
HOH
706
A
HOH
293
6
HOH
HOH
707
A
HOH
294
6
HOH
HOH
708
A
HOH
295
6
HOH
HOH
709
A
HOH
296
6
HOH
HOH
710
A
HOH
297
6
HOH
HOH
711
A
HOH
298
6
HOH
HOH
712
A
HOH
299
6
HOH
HOH
713
A
HOH
300
6
HOH
HOH
714
A
HOH
301
6
HOH
HOH
715
A
HOH
302
6
HOH
HOH
716
A
HOH
303
6
HOH
HOH
717
A
HOH
304
6
HOH
HOH
718
A
HOH
305
6
HOH
HOH
719
A
HOH
306
6
HOH
HOH
720
A
HOH
307
6
HOH
HOH
721
A
HOH
308
6
HOH
HOH
722
A
HOH
309
6
HOH
HOH
723
A
HOH
310
6
HOH
HOH
724
A
HOH
311
6
HOH
HOH
725
A
HOH
312
6
HOH
HOH
726
A
HOH
313
6
HOH
HOH
727
A
HOH
314
6
HOH
HOH
728
A
HOH
315
6
HOH
HOH
729
A
HOH
316
6
HOH
HOH
730
A
HOH
317
6
HOH
HOH
731
A
HOH
318
6
HOH
HOH
732
A
HOH
319
6
HOH
HOH
733
A
HOH
320
6
HOH
HOH
734
A
HOH
321
6
HOH
HOH
735
A
HOH
322
6
HOH
HOH
736
A
HOH
323
6
HOH
HOH
737
A
HOH
324
6
HOH
HOH
738
A
HOH
325
6
HOH
HOH
739
A
HOH
326
6
HOH
HOH
740
A
HOH
327
6
HOH
HOH
741
A
HOH
328
6
HOH
HOH
742
A
HOH
329
6
HOH
HOH
743
A
HOH
331
6
HOH
HOH
744
A
HOH
332
6
HOH
HOH
745
A
HOH
333
6
HOH
HOH
746
A
HOH
334
6
HOH
HOH
747
A
HOH
335
6
HOH
HOH
748
A
HOH
336
6
HOH
HOH
749
A
HOH
337
6
HOH
HOH
750
A
HOH
338
6
HOH
HOH
751
A
HOH
339
6
HOH
HOH
752
A
HOH
340
6
HOH
HOH
753
A
HOH
341
6
HOH
HOH
754
A
HOH
342
6
HOH
HOH
755
A
HOH
343
6
HOH
HOH
756
A
HOH
344
6
HOH
HOH
757
A
HOH
345
6
HOH
HOH
758
A
HOH
346
6
HOH
HOH
759
A
HOH
347
6
HOH
HOH
760
A
n
1
1
A
GLU
2
n
2
GLU
2
A
GLN
3
n
3
GLN
3
A
GLN
4
n
4
GLN
4
A
PRO
5
n
5
PRO
5
A
LEU
6
n
6
LEU
6
A
THR
7
n
7
THR
7
A
LEU
8
n
8
LEU
8
A
THR
9
n
9
THR
9
A
ALA
10
n
10
ALA
10
A
ALA
11
n
11
ALA
11
A
THR
12
n
12
THR
12
A
THR
13
n
13
THR
13
A
ARG
14
n
14
ARG
14
A
ALA
15
n
15
ALA
15
A
GLN
16
n
16
GLN
16
A
GLU
17
n
17
GLU
17
A
LEU
18
n
18
LEU
18
A
ARG
19
n
19
ARG
19
A
LYS
20
n
20
LYS
20
A
GLN
21
n
21
GLN
21
A
LEU
22
n
22
LEU
22
A
ASN
23
n
23
ASN
23
A
GLN
24
n
24
GLN
24
A
TYR
25
n
25
TYR
25
A
SER
26
n
26
SER
26
A
HIS
27
n
27
HIS
27
A
GLU
28
n
28
GLU
28
A
TYR
29
n
29
TYR
29
A
TYR
30
n
30
TYR
30
A
VAL
31
n
31
VAL
31
A
LYS
32
n
32
LYS
32
A
ASP
33
n
33
ASP
33
A
GLN
34
n
34
GLN
34
A
PRO
35
n
35
PRO
35
A
SER
36
n
36
SER
36
A
VAL
37
n
37
VAL
37
A
GLU
38
n
38
GLU
38
A
ASP
39
n
39
ASP
39
A
TYR
40
n
40
TYR
40
A
VAL
41
n
41
VAL
41
A
TYR
42
n
42
TYR
42
A
ASP
43
n
43
ASP
43
A
ARG
44
n
44
ARG
44
A
LEU
45
n
45
LEU
45
A
TYR
46
n
46
TYR
46
A
LYS
47
n
47
LYS
47
A
GLU
48
n
48
GLU
48
A
LEU
49
n
49
LEU
49
A
VAL
50
n
50
VAL
50
A
ASP
51
n
51
ASP
51
A
ILE
52
n
52
ILE
52
A
GLU
53
n
53
GLU
53
A
THR
54
n
54
THR
54
A
GLU
55
n
55
GLU
55
A
PHE
56
n
56
PHE
56
A
PRO
57
n
57
PRO
57
A
ASP
58
n
58
ASP
58
A
LEU
59
n
59
LEU
59
A
ILE
60
n
60
ILE
60
A
THR
61
n
61
THR
61
A
PRO
62
n
62
PRO
62
A
ASP
63
n
63
ASP
63
A
SER
64
n
64
SER
64
A
PRO
65
n
65
PRO
65
A
THR
66
n
66
THR
66
A
GLN
67
n
67
GLN
67
A
ARG
68
n
68
ARG
68
A
VAL
69
n
69
VAL
69
A
GLY
70
n
70
GLY
70
A
GLY
71
n
71
GLY
71
A
LYS
72
n
72
LYS
72
A
VAL
73
n
73
VAL
73
A
LEU
74
n
74
LEU
74
A
SER
75
n
75
SER
75
A
GLY
76
n
76
GLY
76
A
PHE
77
n
77
PHE
77
A
GLU
78
n
78
GLU
78
A
LYS
79
n
79
LYS
79
A
ALA
80
n
80
ALA
80
A
PRO
81
n
81
PRO
81
A
HIS
82
n
82
HIS
82
A
ASP
83
n
83
ASP
83
A
ILE
84
n
84
ILE
84
A
PRO
85
n
85
PRO
85
A
MET
86
n
86
MET
86
A
TYR
87
n
87
TYR
87
A
SER
88
n
88
SER
88
A
LEU
89
n
89
LEU
89
A
ASN
90
n
90
ASN
90
A
ASP
91
n
91
ASP
91
A
GLY
92
n
92
GLY
92
A
PHE
93
n
93
PHE
93
A
SER
94
n
94
SER
94
A
LYS
95
n
95
LYS
95
A
GLU
96
n
96
GLU
96
A
ASP
97
n
97
ASP
97
A
ILE
98
n
98
ILE
98
A
PHE
99
n
99
PHE
99
A
ALA
100
n
100
ALA
100
A
PHE
101
n
101
PHE
101
A
ASP
102
n
102
ASP
102
A
GLU
103
n
103
GLU
103
A
ARG
104
n
104
ARG
104
A
VAL
105
n
105
VAL
105
A
ARG
106
n
106
ARG
106
A
LYS
107
n
107
LYS
107
A
ALA
108
n
108
ALA
108
A
ILE
109
n
109
ILE
109
A
GLY
110
n
110
GLY
110
A
LYS
111
n
111
LYS
111
A
PRO
112
n
112
PRO
112
A
VAL
113
n
113
VAL
113
A
ALA
114
n
114
ALA
114
A
TYR
115
n
115
TYR
115
A
CYS
116
n
116
CYS
116
A
CYS
117
n
117
CYS
117
A
GLU
118
n
118
GLU
118
A
LEU
119
n
119
LEU
119
A
LYS
120
n
120
LYS
120
A
ILE
121
n
121
ILE
121
A
ASP
122
n
122
ASP
122
A
GLY
123
n
123
GLY
123
A
LEU
124
n
124
LEU
124
A
ALA
125
n
125
ALA
125
A
ILE
126
n
126
ILE
126
A
SER
127
n
127
SER
127
A
LEU
128
n
128
LEU
128
A
ARG
129
n
129
ARG
129
A
TYR
130
n
130
TYR
130
A
GLU
131
n
131
GLU
131
A
ASN
132
n
132
ASN
132
A
GLY
133
n
133
GLY
133
A
VAL
134
n
134
VAL
134
A
PHE
135
n
135
PHE
135
A
VAL
136
n
136
VAL
136
A
ARG
137
n
137
ARG
137
A
GLY
138
n
138
GLY
138
A
ALA
139
n
139
ALA
139
A
THR
140
n
140
THR
140
A
ARG
141
n
141
ARG
141
A
GLY
142
n
142
GLY
142
A
ASP
143
n
143
ASP
143
A
GLY
144
n
144
GLY
144
A
THR
145
n
145
THR
145
A
VAL
146
n
146
VAL
146
A
GLY
147
n
147
GLY
147
A
GLU
148
n
148
GLU
148
A
ASN
149
n
149
ASN
149
A
ILE
150
n
150
ILE
150
A
THR
151
n
151
THR
151
A
GLU
152
n
152
GLU
152
A
ASN
153
n
153
ASN
153
A
LEU
154
n
154
LEU
154
A
ARG
155
n
155
ARG
155
A
THR
156
n
156
THR
156
A
VAL
157
n
157
VAL
157
A
ARG
158
n
158
ARG
158
A
SER
159
n
159
SER
159
A
VAL
160
n
160
VAL
160
A
PRO
161
n
161
PRO
161
A
MET
162
n
162
MET
162
A
ARG
163
n
163
ARG
163
A
LEU
164
n
164
LEU
164
A
THR
165
n
165
THR
165
A
GLU
166
n
166
GLU
166
A
PRO
167
n
167
PRO
167
A
ILE
168
n
168
ILE
168
A
SER
169
n
169
SER
169
A
VAL
170
n
170
VAL
170
A
GLU
171
n
171
GLU
171
A
VAL
172
n
172
VAL
172
A
ARG
173
n
173
ARG
173
A
GLY
174
n
174
GLY
174
A
GLU
175
n
175
GLU
175
A
CYS
176
n
176
CYS
176
A
TYR
177
n
177
TYR
177
A
MET
178
n
178
MET
178
A
PRO
179
n
179
PRO
179
A
LYS
180
n
180
LYS
180
A
GLN
181
n
181
GLN
181
A
SER
182
n
182
SER
182
A
PHE
183
n
183
PHE
183
A
VAL
184
n
184
VAL
184
A
ALA
185
n
185
ALA
185
A
LEU
186
n
186
LEU
186
A
ASN
187
n
187
ASN
187
A
GLU
188
n
188
GLU
188
A
GLU
189
n
189
GLU
189
A
ARG
190
n
190
ARG
190
A
GLU
191
n
191
GLU
191
A
GLU
192
n
192
GLU
192
A
ASN
193
n
193
ASN
193
A
GLY
194
n
194
GLY
194
A
GLN
195
n
195
GLN
195
A
ASP
196
n
196
ASP
196
A
ILE
197
n
197
ILE
197
A
PHE
198
n
198
PHE
198
A
ALA
199
n
199
ALA
199
A
ASN
200
n
200
ASN
200
A
PRO
201
n
201
PRO
201
A
ARG
202
n
202
ARG
202
A
ASN
203
n
203
ASN
203
A
ALA
204
n
204
ALA
204
A
ALA
205
n
205
ALA
205
A
ALA
206
n
206
ALA
206
A
GLY
207
n
207
GLY
207
A
SER
208
n
208
SER
208
A
LEU
209
n
209
LEU
209
A
ARG
210
n
210
ARG
210
A
GLN
211
n
211
GLN
211
A
LEU
212
n
212
LEU
212
A
ASP
213
n
213
ASP
213
A
THR
214
n
214
THR
214
A
LYS
215
n
215
LYS
215
A
ILE
216
n
216
ILE
216
A
VAL
217
n
217
VAL
217
A
ALA
218
n
218
ALA
218
A
LYS
219
n
219
LYS
219
A
ARG
220
n
220
ARG
220
A
ASN
221
n
221
ASN
221
A
LEU
222
n
222
LEU
222
A
ASN
223
n
223
ASN
223
A
THR
224
n
224
THR
224
A
PHE
225
n
225
PHE
225
A
LEU
226
n
226
LEU
226
A
TYR
227
n
227
TYR
227
A
THR
228
n
228
THR
228
A
VAL
229
n
229
VAL
229
A
ALA
230
n
230
ALA
230
A
ASP
231
n
231
ASP
231
A
PHE
232
n
232
PHE
232
A
GLY
233
n
233
GLY
233
A
PRO
234
n
234
PRO
234
A
MET
235
n
235
MET
235
A
LYS
236
n
236
LYS
236
A
ALA
237
n
237
ALA
237
A
LYS
238
n
238
LYS
238
A
THR
239
n
239
THR
239
A
GLN
240
n
240
GLN
240
A
PHE
241
n
241
PHE
241
A
GLU
242
n
242
GLU
242
A
ALA
243
n
243
ALA
243
A
LEU
244
n
244
LEU
244
A
GLU
245
n
245
GLU
245
A
GLU
246
n
246
GLU
246
A
LEU
247
n
247
LEU
247
A
SER
248
n
248
SER
248
A
ALA
249
n
249
ALA
249
A
ILE
250
n
250
ILE
250
A
GLY
251
n
251
GLY
251
A
PHE
252
n
252
PHE
252
A
ARG
253
n
253
ARG
253
A
THR
254
n
254
THR
254
A
ASN
255
n
255
ASN
255
A
PRO
256
n
256
PRO
256
A
GLU
257
n
257
GLU
257
A
ARG
258
n
258
ARG
258
A
GLN
259
n
259
GLN
259
A
LEU
260
n
260
LEU
260
A
CYS
261
n
261
CYS
261
A
GLN
262
n
262
GLN
262
A
SER
263
n
263
SER
263
A
ILE
264
n
264
ILE
264
A
ASP
265
n
265
ASP
265
A
GLU
266
n
266
GLU
266
A
VAL
267
n
267
VAL
267
A
TRP
268
n
268
TRP
268
A
ALA
269
n
269
ALA
269
A
TYR
270
n
270
TYR
270
A
ILE
271
n
271
ILE
271
A
GLU
272
n
272
GLU
272
A
GLU
273
n
273
GLU
273
A
TYR
274
n
274
TYR
274
A
HIS
275
n
275
HIS
275
A
GLU
276
n
276
GLU
276
A
LYS
277
n
277
LYS
277
A
ARG
278
n
278
ARG
278
A
SER
279
n
279
SER
279
A
THR
280
n
280
THR
280
A
LEU
281
n
281
LEU
281
A
PRO
282
n
282
PRO
282
A
TYR
283
n
283
TYR
283
A
GLU
284
n
284
GLU
284
A
ILE
285
n
285
ILE
285
A
ASP
286
n
286
ASP
286
A
GLY
287
n
287
GLY
287
A
ILE
288
n
288
ILE
288
A
VAL
289
n
289
VAL
289
A
ILE
290
n
290
ILE
290
A
LYS
291
n
291
LYS
291
A
VAL
292
n
292
VAL
292
A
ASN
293
n
293
ASN
293
A
GLU
294
n
294
GLU
294
A
PHE
295
n
295
PHE
295
A
ALA
296
n
296
ALA
296
A
LEU
297
n
297
LEU
297
A
GLN
298
n
298
GLN
298
A
ASP
299
n
299
ASP
299
A
GLU
300
n
300
GLU
300
A
LEU
301
n
301
LEU
301
A
GLY
302
n
302
GLY
302
A
PHE
303
n
303
PHE
303
A
THR
304
n
304
THR
304
A
VAL
305
n
305
VAL
305
A
LYS
306
n
306
LYS
306
A
ALA
307
n
307
ALA
307
A
PRO
308
n
308
PRO
308
A
ARG
309
n
309
ARG
309
A
TRP
310
n
310
TRP
310
A
ALA
311
n
311
ALA
311
A
ILE
312
n
312
ILE
312
A
ALA
313
n
313
ALA
313
A
TYR
314
n
314
TYR
314
A
LYS
315
n
315
LYS
315
A
PHE
316
n
316
PHE
316
A
PRO
317
n
317
PRO
317
A
PRO
318
n
318
PRO
318
A
GLU
319
n
319
GLU
319
A
GLU
320
n
320
GLU
320
A
ALA
321
n
321
ALA
321
A
GLU
322
n
322
GLU
322
A
THR
323
n
323
THR
323
A
0.2113
-0.1269
0.0778
0.1517
0.0240
0.1444
-0.0238
-0.0156
-0.0333
0.0116
0.0198
0.0237
0.0101
-0.0057
0.0041
0.0153
0.0024
0.0109
0.0130
0.0034
0.0097
refined
11.5660
38.6870
17.3500
X-RAY DIFFRACTION
A
501
A
760
X-RAY DIFFRACTION
1
A
401
A
405
X-RAY DIFFRACTION
1
A
2
A
323
X-RAY DIFFRACTION
1
author_and_software_defined_assembly
PISA
1
monomeric
A
ALA
218
A
O
ALA
218
1_555
A
NA
404
E
NA
NA
1_555
A
ARG
220
A
O
ARG
220
1_555
93.8
A
ALA
218
A
O
ALA
218
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
519
G
O
HOH
1_555
161.4
A
ARG
220
A
O
ARG
220
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
519
G
O
HOH
1_555
79.2
A
ALA
218
A
O
ALA
218
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
556
G
O
HOH
1_555
99.5
A
ARG
220
A
O
ARG
220
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
556
G
O
HOH
1_555
86.0
A
HOH
519
G
O
HOH
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
556
G
O
HOH
1_555
63.0
A
ALA
218
A
O
ALA
218
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
583
G
O
HOH
1_555
85.1
A
ARG
220
A
O
ARG
220
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
583
G
O
HOH
1_555
175.3
A
HOH
519
G
O
HOH
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
583
G
O
HOH
1_555
100.6
A
HOH
556
G
O
HOH
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
583
G
O
HOH
1_555
89.8
A
ALA
218
A
O
ALA
218
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
755
G
O
HOH
1_555
108.1
A
ARG
220
A
O
ARG
220
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
755
G
O
HOH
1_555
89.6
A
HOH
519
G
O
HOH
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
755
G
O
HOH
1_555
89.2
A
HOH
556
G
O
HOH
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
755
G
O
HOH
1_555
152.3
A
HOH
583
G
O
HOH
1_555
A
NA
404
E
NA
NA
1_555
A
HOH
755
G
O
HOH
1_555
95.1
A
GLU
276
A
O
GLU
276
1_555
A
NA
405
F
NA
NA
1_555
A
SER
279
A
OG
SER
279
1_555
107.3
A
GLU
276
A
O
GLU
276
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
503
G
O
HOH
1_555
73.8
A
SER
279
A
OG
SER
279
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
503
G
O
HOH
1_555
82.6
A
GLU
276
A
O
GLU
276
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
515
G
O
HOH
1_555
163.1
A
SER
279
A
OG
SER
279
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
515
G
O
HOH
1_555
79.3
A
HOH
503
G
O
HOH
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
515
G
O
HOH
1_555
92.0
A
GLU
276
A
O
GLU
276
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
590
G
O
HOH
1_555
97.6
A
SER
279
A
OG
SER
279
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
590
G
O
HOH
1_555
152.7
A
HOH
503
G
O
HOH
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
590
G
O
HOH
1_555
93.9
A
HOH
515
G
O
HOH
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
590
G
O
HOH
1_555
73.7
A
GLU
276
A
O
GLU
276
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
593
G
O
HOH
1_555
84.0
A
SER
279
A
OG
SER
279
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
593
G
O
HOH
1_555
90.8
A
HOH
503
G
O
HOH
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
593
G
O
HOH
1_555
153.7
A
HOH
515
G
O
HOH
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
593
G
O
HOH
1_555
111.8
A
HOH
590
G
O
HOH
1_555
A
NA
405
F
NA
NA
1_555
A
HOH
593
G
O
HOH
1_555
103.1
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ALA
80
A
N
ALA
80
A
O
GLY
147
A
O
GLY
147
A
N
GLY
92
A
N
GLY
92
A
O
ALA
313
A
O
ALA
313
A
O
TYR
314
A
O
TYR
314
A
N
ILE
288
A
N
ILE
288
A
O
VAL
289
A
O
VAL
289
A
N
GLU
118
A
N
GLU
118
A
N
TYR
115
A
N
TYR
115
A
O
CYS
261
A
O
CYS
261
A
O
ARG
137
A
O
ARG
137
A
N
ARG
129
A
N
ARG
129
A
N
LEU
128
A
N
LEU
128
A
O
VAL
172
A
O
VAL
172
A
N
ARG
173
A
N
ARG
173
A
O
THR
228
A
O
THR
228
1
A
MET
1
A
MET
1
1
Y
1
A
GLU
322
-118.94
56.73
30.525
-0.07
0.00
0.00
-0.78
0.00
0.86
0.948
0.936
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.24834
0.21913
0.22062
1.65
52.19
2119
39958
5.0
98.84
2.403
0.082
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.121
0.114
0.80
0.80
1.20
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
1.65
52.19
260
2888
42
0
2586
0.005
0.020
2792
0.001
0.020
1903
0.958
1.982
3802
0.748
3.000
4634
4.969
5.000
343
32.885
24.483
145
12.677
15.000
478
14.379
15.000
22
0.057
0.200
404
0.004
0.021
3186
0.001
0.020
570
0.328
0.307
1.693
143
2605
20
92.46
1.65
52.19
4LH6
42571
42107
2.0
2.0
0.058
1
11.9
4.62
98.9
0.436
1.65
1.71
2.2
3928
1
3.31
94
data collection
CrystalClear
phasing
AMoRE
refinement
REFMAC
5.6.0117
data reduction
d*TREK
data scaling
d*TREK
Crystal structure of a LigA inhibitor
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
6
N
N
A
THR
7
A
THR
7
HELX_P
A
VAL
31
A
VAL
31
1
1
25
A
GLU
38
A
GLU
38
HELX_P
A
PHE
56
A
PHE
56
1
2
19
A
PRO
57
A
PRO
57
HELX_P
A
ILE
60
A
ILE
60
5
3
4
A
SER
64
A
SER
64
HELX_P
A
ARG
68
A
ARG
68
5
4
5
A
SER
94
A
SER
94
HELX_P
A
GLY
110
A
GLY
110
1
5
17
A
ILE
150
A
ILE
150
HELX_P
A
THR
156
A
THR
156
1
6
7
A
PRO
179
A
PRO
179
HELX_P
A
ASN
193
A
ASN
193
1
7
15
A
ASN
200
A
ASN
200
HELX_P
A
ARG
210
A
ARG
210
1
8
11
A
ASP
213
A
ASP
213
HELX_P
A
ARG
220
A
ARG
220
1
9
8
A
THR
239
A
THR
239
HELX_P
A
GLY
251
A
GLY
251
1
10
13
A
SER
263
A
SER
263
HELX_P
A
ARG
278
A
ARG
278
1
11
16
A
SER
279
A
SER
279
HELX_P
A
LEU
281
A
LEU
281
5
12
3
A
GLU
294
A
GLU
294
HELX_P
A
GLY
302
A
GLY
302
1
13
9
A
PRO
318
A
PRO
318
HELX_P
A
GLU
322
A
GLU
322
5
14
5
metalc
2.520
A
ALA
218
A
O
ALA
218
1_555
A
NA
404
E
NA
NA
1_555
metalc
2.245
A
ARG
220
A
O
ARG
220
1_555
A
NA
404
E
NA
NA
1_555
metalc
2.463
A
GLU
276
A
O
GLU
276
1_555
A
NA
405
F
NA
NA
1_555
metalc
2.407
A
SER
279
A
OG
SER
279
1_555
A
NA
405
F
NA
NA
1_555
metalc
2.397
A
NA
404
E
NA
NA
1_555
A
HOH
519
G
O
HOH
1_555
metalc
2.833
A
NA
404
E
NA
NA
1_555
A
HOH
556
G
O
HOH
1_555
metalc
2.149
A
NA
404
E
NA
NA
1_555
A
HOH
583
G
O
HOH
1_555
metalc
2.395
A
NA
404
E
NA
NA
1_555
A
HOH
755
G
O
HOH
1_555
metalc
2.524
A
NA
405
F
NA
NA
1_555
A
HOH
503
G
O
HOH
1_555
metalc
2.512
A
NA
405
F
NA
NA
1_555
A
HOH
515
G
O
HOH
1_555
metalc
2.324
A
NA
405
F
NA
NA
1_555
A
HOH
590
G
O
HOH
1_555
metalc
2.266
A
NA
405
F
NA
NA
1_555
A
HOH
593
G
O
HOH
1_555
LIGASE/LIGASE INHIBITOR
Protein-inhibitor complex, LIGASE-LIGASE INHIBITOR complex
DNLJ_ENTFA
UNP
1
1
Q837V6
MEQQPLTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVGGKVLSGFEKA
PHDIPMYSLNDGFSKEDIFAFDERVRKAIGKPVAYCCELKIDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSV
PMRLTEPISVEVRGECYMPKQSFVALNEEREENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMKAKTQ
FEALEELSAIGFRTNPERQLCQSIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFALQDELGFTVKAPRWAIAYKFPPEE
AET
1
323
4LH6
1
323
Q837V6
A
1
1
323
2
5
4
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
79
A
LYS
79
A
PRO
81
A
PRO
81
A
VAL
146
A
VAL
146
A
GLU
148
A
GLU
148
A
ASP
91
A
ASP
91
A
GLY
92
A
GLY
92
A
ALA
311
A
ALA
311
A
LYS
315
A
LYS
315
A
ILE
285
A
ILE
285
A
VAL
292
A
VAL
292
A
TYR
115
A
TYR
115
A
ILE
121
A
ILE
121
A
GLN
259
A
GLN
259
A
CYS
261
A
CYS
261
A
VAL
134
A
VAL
134
A
THR
140
A
THR
140
A
LEU
124
A
LEU
124
A
GLU
131
A
GLU
131
A
VAL
170
A
VAL
170
A
TYR
177
A
TYR
177
A
ASN
223
A
ASN
223
A
VAL
229
A
VAL
229
BINDING SITE FOR RESIDUE 1X7 A 401
A
1X7
401
Software
10
BINDING SITE FOR RESIDUE NMN A 402
A
NMN
402
Software
14
BINDING SITE FOR RESIDUE ACT A 403
A
ACT
403
Software
5
BINDING SITE FOR RESIDUE NA A 404
A
NA
404
Software
6
BINDING SITE FOR RESIDUE NA A 405
A
NA
405
Software
6
A
TYR
87
A
TYR
87
10
1_555
A
GLU
118
A
GLU
118
10
1_555
A
LEU
119
A
LEU
119
10
1_555
A
LYS
120
A
LYS
120
10
1_555
A
ILE
121
A
ILE
121
10
1_555
A
GLU
175
A
GLU
175
10
1_555
A
TYR
227
A
TYR
227
10
1_555
A
VAL
289
A
VAL
289
10
1_555
A
LYS
291
A
LYS
291
10
1_555
A
HOH
570
G
HOH
10
1_555
A
TYR
25
A
TYR
25
14
1_555
A
SER
26
A
SER
26
14
1_555
A
TYR
29
A
TYR
29
14
1_555
A
TYR
30
A
TYR
30
14
1_555
A
VAL
37
A
VAL
37
14
1_555
A
ASP
39
A
ASP
39
14
1_555
A
TYR
42
A
TYR
42
14
1_555
A
ASP
43
A
ASP
43
14
1_555
A
ARG
158
A
ARG
158
14
1_555
A
HOH
520
G
HOH
14
1_555
A
HOH
528
G
HOH
14
1_555
A
HOH
571
G
HOH
14
1_555
A
HOH
645
G
HOH
14
1_555
A
HOH
694
G
HOH
14
1_555
A
TRP
268
A
TRP
268
5
1_555
A
HIS
275
A
HIS
275
5
1_555
A
TYR
314
A
TYR
314
5
1_555
A
HOH
716
G
HOH
5
1_555
A
HOH
739
G
HOH
5
1_555
A
ALA
218
A
ALA
218
6
1_555
A
ARG
220
A
ARG
220
6
1_555
A
HOH
519
G
HOH
6
1_555
A
HOH
556
G
HOH
6
1_555
A
HOH
583
G
HOH
6
1_555
A
HOH
755
G
HOH
6
1_555
A
GLU
276
A
GLU
276
6
1_555
A
SER
279
A
SER
279
6
1_555
A
HOH
503
G
HOH
6
1_555
A
HOH
515
G
HOH
6
1_555
A
HOH
590
G
HOH
6
1_555
A
HOH
593
G
HOH
6
1_555
20
C 2 2 21