0.021739
0.012551
0.000000
0.000000
0.025102
0.000000
0.000000
0.000000
0.007498
0.00000
0.00000
0.00000
Rana, R.R.
Stieglitz, B.
Koliopoulos, M.G.
Morris-Davies, A.C.
Christodoulou, E.
Howell, S.
Brown, N.R.
Rittinger, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
3
90.00
90.00
120.00
46.000
46.000
133.370
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
UK
Nature
NATUAS
0006
0028-0836
503
422
426
10.1038/nature12638
24141947
Structural basis for ligase-specific conjugation of linear ubiquitin chains by HOIP.
2013
10.2210/pdb4ljp/pdb
pdb_00004ljp
100
1
PIXEL
2012-12-10
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.920
1.0
I04-1
Diamond
0.920
SYNCHROTRON
DIAMOND BEAMLINE I04-1
25032.590
E3 ubiquitin-protein ligase RNF31
6.3.2.-
E3 ligase HOIP catalytic core (unp residues 853-1072)
H889A
1
man
polymer
8576.831
Polyubiquitin-C
unp residues 77-152
1
nat
polymer
65.409
ZINC ION
4
syn
non-polymer
18.015
water
120
nat
water
HOIL-1-interacting protein, HOIP, RING finger protein 31, Zinc in-between-RING-finger ubiquitin-associated domain protein
no
no
GPGPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFACTQCRHQFCSGCYNAFYAKNKCPEPNCRVKKSLHGHHPRD
CLFYLRDWTALRLQKLLQDNNVMFNTEPPAGARAVPGGGCRVIEQKEVPNGLRDEACGKETPAGYAGLCQAHYKEYLVSL
INAHSLDPATLYEVEELETATERYLHVRPQPLAGEDPPAYQARLLQKLTEEVPLGQSIPRRRK
GPGPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFACTQCRHQFCSGCYNAFYAKNKCPEPNCRVKKSLHGHHPRD
CLFYLRDWTALRLQKLLQDNNVMFNTEPPAGARAVPGGGCRVIEQKEVPNGLRDEACGKETPAGYAGLCQAHYKEYLVSL
INAHSLDPATLYEVEELETATERYLHVRPQPLAGEDPPAYQARLLQKLTEEVPLGQSIPRRRK
A
polypeptide(L)
no
no
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
RNF31, ZIBRA
9606
Homo sapiens
511693
Escherichia coli
BL21 Gold
plasmid
pET-49b
bovine,cow,domestic cattle,domestic cow
sample
9913
Bos taurus
1
2.49
50.55
VAPOR DIFFUSION, SITTING DROP
6.5
0.1 M amino acids, 0.1 M imidazole, MES, 30 % P550 MME_P20K , pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
software
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Database references
Other
Refinement description
Data collection
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-10-16
1
1
2013-11-13
1
2
2013-12-18
1
3
2014-12-10
1
4
2017-11-15
1
5
2019-07-17
1
6
2023-09-20
_software.classification
_software.classification
_software.contact_author
_software.contact_author_email
_software.date
_software.location
_software.name
_software.type
_software.version
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2013-07-05
REL
REL
ZN
ZINC ION
HOH
water
4LJO
pdb entry 4LJO
PDB
experimental model
ZN
1
3
ZN
ZN
1101
A
ZN
1
3
ZN
ZN
1102
A
ZN
1
3
ZN
ZN
1103
A
ZN
1
3
ZN
ZN
1104
A
HOH
2
4
HOH
HOH
1201
A
HOH
3
4
HOH
HOH
1202
A
HOH
4
4
HOH
HOH
1203
A
HOH
5
4
HOH
HOH
1204
A
HOH
6
4
HOH
HOH
1205
A
HOH
7
4
HOH
HOH
1206
A
HOH
8
4
HOH
HOH
1207
A
HOH
9
4
HOH
HOH
1208
A
HOH
14
4
HOH
HOH
1209
A
HOH
16
4
HOH
HOH
1210
A
HOH
17
4
HOH
HOH
1211
A
HOH
18
4
HOH
HOH
1212
A
HOH
19
4
HOH
HOH
1213
A
HOH
22
4
HOH
HOH
1214
A
HOH
23
4
HOH
HOH
1215
A
HOH
25
4
HOH
HOH
1216
A
HOH
26
4
HOH
HOH
1217
A
HOH
27
4
HOH
HOH
1218
A
HOH
29
4
HOH
HOH
1219
A
HOH
31
4
HOH
HOH
1220
A
HOH
32
4
HOH
HOH
1221
A
HOH
34
4
HOH
HOH
1222
A
HOH
35
4
HOH
HOH
1223
A
HOH
36
4
HOH
HOH
1224
A
HOH
37
4
HOH
HOH
1225
A
HOH
38
4
HOH
HOH
1226
A
HOH
39
4
HOH
HOH
1227
A
HOH
40
4
HOH
HOH
1228
A
HOH
42
4
HOH
HOH
1229
A
HOH
43
4
HOH
HOH
1230
A
HOH
45
4
HOH
HOH
1231
A
HOH
47
4
HOH
HOH
1232
A
HOH
48
4
HOH
HOH
1233
A
HOH
49
4
HOH
HOH
1234
A
HOH
52
4
HOH
HOH
1235
A
HOH
53
4
HOH
HOH
1236
A
HOH
54
4
HOH
HOH
1237
A
HOH
55
4
HOH
HOH
1238
A
HOH
57
4
HOH
HOH
1239
A
HOH
58
4
HOH
HOH
1240
A
HOH
59
4
HOH
HOH
1241
A
HOH
60
4
HOH
HOH
1242
A
HOH
61
4
HOH
HOH
1243
A
HOH
62
4
HOH
HOH
1244
A
HOH
63
4
HOH
HOH
1245
A
HOH
65
4
HOH
HOH
1246
A
HOH
66
4
HOH
HOH
1247
A
HOH
67
4
HOH
HOH
1248
A
HOH
68
4
HOH
HOH
1249
A
HOH
70
4
HOH
HOH
1250
A
HOH
72
4
HOH
HOH
1251
A
HOH
75
4
HOH
HOH
1252
A
HOH
76
4
HOH
HOH
1253
A
HOH
77
4
HOH
HOH
1254
A
HOH
78
4
HOH
HOH
1255
A
HOH
79
4
HOH
HOH
1256
A
HOH
80
4
HOH
HOH
1257
A
HOH
81
4
HOH
HOH
1258
A
HOH
82
4
HOH
HOH
1259
A
HOH
85
4
HOH
HOH
1260
A
HOH
87
4
HOH
HOH
1261
A
HOH
90
4
HOH
HOH
1262
A
HOH
91
4
HOH
HOH
1263
A
HOH
92
4
HOH
HOH
1264
A
HOH
93
4
HOH
HOH
1265
A
HOH
95
4
HOH
HOH
1266
A
HOH
96
4
HOH
HOH
1267
A
HOH
97
4
HOH
HOH
1268
A
HOH
98
4
HOH
HOH
1269
A
HOH
99
4
HOH
HOH
1270
A
HOH
100
4
HOH
HOH
1271
A
HOH
102
4
HOH
HOH
1272
A
HOH
104
4
HOH
HOH
1273
A
HOH
106
4
HOH
HOH
1274
A
HOH
109
4
HOH
HOH
1275
A
HOH
111
4
HOH
HOH
1276
A
HOH
115
4
HOH
HOH
1277
A
HOH
117
4
HOH
HOH
1278
A
HOH
119
4
HOH
HOH
1279
A
HOH
128
4
HOH
HOH
1280
A
HOH
129
4
HOH
HOH
1281
A
HOH
130
4
HOH
HOH
1282
A
HOH
132
4
HOH
HOH
1283
A
HOH
139
4
HOH
HOH
1284
A
HOH
141
4
HOH
HOH
1285
A
HOH
149
4
HOH
HOH
1286
A
HOH
150
4
HOH
HOH
1287
A
HOH
151
4
HOH
HOH
1288
A
HOH
153
4
HOH
HOH
1289
A
HOH
155
4
HOH
HOH
1290
A
HOH
160
4
HOH
HOH
1291
A
HOH
1
4
HOH
HOH
101
B
HOH
11
4
HOH
HOH
102
B
HOH
15
4
HOH
HOH
103
B
HOH
20
4
HOH
HOH
104
B
HOH
21
4
HOH
HOH
105
B
HOH
24
4
HOH
HOH
106
B
HOH
28
4
HOH
HOH
107
B
HOH
30
4
HOH
HOH
108
B
HOH
33
4
HOH
HOH
109
B
HOH
41
4
HOH
HOH
110
B
HOH
44
4
HOH
HOH
111
B
HOH
46
4
HOH
HOH
112
B
HOH
50
4
HOH
HOH
113
B
HOH
51
4
HOH
HOH
114
B
HOH
56
4
HOH
HOH
115
B
HOH
69
4
HOH
HOH
116
B
HOH
71
4
HOH
HOH
117
B
HOH
73
4
HOH
HOH
118
B
HOH
74
4
HOH
HOH
119
B
HOH
83
4
HOH
HOH
120
B
HOH
84
4
HOH
HOH
121
B
HOH
86
4
HOH
HOH
122
B
HOH
88
4
HOH
HOH
123
B
HOH
89
4
HOH
HOH
124
B
HOH
107
4
HOH
HOH
125
B
HOH
108
4
HOH
HOH
126
B
HOH
136
4
HOH
HOH
127
B
HOH
138
4
HOH
HOH
128
B
HOH
140
4
HOH
HOH
129
B
6.100
6.100
38.170
38.170
Phaser MODE: MR_AUTO
n
1
850
A
n
2
851
A
n
3
852
A
n
4
853
A
n
5
854
A
n
6
855
A
n
7
856
A
ALA
857
n
8
ALA
857
A
GLN
858
n
9
GLN
858
A
GLY
859
n
10
GLY
859
A
LEU
860
n
11
LEU
860
A
ALA
861
n
12
ALA
861
A
MET
862
n
13
MET
862
A
TYR
863
n
14
TYR
863
A
LEU
864
n
15
LEU
864
A
GLN
865
n
16
GLN
865
A
GLU
866
n
17
GLU
866
A
ASN
867
n
18
ASN
867
A
GLY
868
n
19
GLY
868
A
ILE
869
n
20
ILE
869
A
ASP
870
n
21
ASP
870
A
CYS
871
n
22
CYS
871
A
PRO
872
n
23
PRO
872
A
LYS
873
n
24
LYS
873
A
CYS
874
n
25
CYS
874
A
LYS
875
n
26
LYS
875
A
PHE
876
n
27
PHE
876
A
SER
877
n
28
SER
877
A
TYR
878
n
29
TYR
878
A
ALA
879
n
30
ALA
879
A
LEU
880
n
31
LEU
880
A
ALA
881
n
32
ALA
881
A
ARG
882
n
33
ARG
882
A
GLY
883
n
34
GLY
883
A
GLY
884
n
35
GLY
884
A
CYS
885
n
36
CYS
885
A
MET
886
n
37
MET
886
A
HIS
887
n
38
HIS
887
A
PHE
888
n
39
PHE
888
A
ALA
889
n
40
ALA
889
A
CYS
890
n
41
CYS
890
A
THR
891
n
42
THR
891
A
GLN
892
n
43
GLN
892
A
CYS
893
n
44
CYS
893
A
ARG
894
n
45
ARG
894
A
HIS
895
n
46
HIS
895
A
GLN
896
n
47
GLN
896
A
PHE
897
n
48
PHE
897
A
CYS
898
n
49
CYS
898
A
SER
899
n
50
SER
899
A
GLY
900
n
51
GLY
900
A
CYS
901
n
52
CYS
901
A
TYR
902
n
53
TYR
902
A
ASN
903
n
54
ASN
903
A
ALA
904
n
55
ALA
904
A
PHE
905
n
56
PHE
905
A
TYR
906
n
57
TYR
906
A
ALA
907
n
58
ALA
907
A
LYS
908
n
59
LYS
908
A
ASN
909
n
60
ASN
909
A
LYS
910
n
61
LYS
910
A
CYS
911
n
62
CYS
911
A
PRO
912
n
63
PRO
912
A
GLU
913
n
64
GLU
913
A
PRO
914
n
65
PRO
914
A
ASN
915
n
66
ASN
915
A
CYS
916
n
67
CYS
916
A
ARG
917
n
68
ARG
917
A
VAL
918
n
69
VAL
918
A
LYS
919
n
70
LYS
919
A
LYS
920
n
71
LYS
920
A
SER
921
n
72
SER
921
A
LEU
922
n
73
LEU
922
A
HIS
923
n
74
HIS
923
A
GLY
924
n
75
GLY
924
A
HIS
925
n
76
HIS
925
A
HIS
926
n
77
HIS
926
A
PRO
927
n
78
PRO
927
A
ARG
928
n
79
ARG
928
A
ASP
929
n
80
ASP
929
A
CYS
930
n
81
CYS
930
A
LEU
931
n
82
LEU
931
A
PHE
932
n
83
PHE
932
A
TYR
933
n
84
TYR
933
A
LEU
934
n
85
LEU
934
A
ARG
935
n
86
ARG
935
A
ASP
936
n
87
ASP
936
A
TRP
937
n
88
TRP
937
A
THR
938
n
89
THR
938
A
ALA
939
n
90
ALA
939
A
LEU
940
n
91
LEU
940
A
ARG
941
n
92
ARG
941
A
LEU
942
n
93
LEU
942
A
GLN
943
n
94
GLN
943
A
LYS
944
n
95
LYS
944
A
LEU
945
n
96
LEU
945
A
LEU
946
n
97
LEU
946
A
GLN
947
n
98
GLN
947
A
ASP
948
n
99
ASP
948
A
ASN
949
n
100
ASN
949
A
ASN
950
n
101
ASN
950
A
VAL
951
n
102
VAL
951
A
MET
952
n
103
MET
952
A
PHE
953
n
104
PHE
953
A
ASN
954
n
105
ASN
954
A
THR
955
n
106
THR
955
A
GLU
956
n
107
GLU
956
A
PRO
957
n
108
PRO
957
A
PRO
958
n
109
PRO
958
A
ALA
959
n
110
ALA
959
A
GLY
960
n
111
GLY
960
A
ALA
961
n
112
ALA
961
A
ARG
962
n
113
ARG
962
A
ALA
963
n
114
ALA
963
A
VAL
964
n
115
VAL
964
A
PRO
965
n
116
PRO
965
A
GLY
966
n
117
GLY
966
A
GLY
967
n
118
GLY
967
A
GLY
968
n
119
GLY
968
A
CYS
969
n
120
CYS
969
A
ARG
970
n
121
ARG
970
A
VAL
971
n
122
VAL
971
A
ILE
972
n
123
ILE
972
A
GLU
973
n
124
GLU
973
A
GLN
974
n
125
GLN
974
A
LYS
975
n
126
LYS
975
A
GLU
976
n
127
GLU
976
A
VAL
977
n
128
VAL
977
A
PRO
978
n
129
PRO
978
A
ASN
979
n
130
ASN
979
A
GLY
980
n
131
GLY
980
A
LEU
981
n
132
LEU
981
A
ARG
982
n
133
ARG
982
A
ASP
983
n
134
ASP
983
A
GLU
984
n
135
GLU
984
A
ALA
985
n
136
ALA
985
A
CYS
986
n
137
CYS
986
A
GLY
987
n
138
GLY
987
A
LYS
988
n
139
LYS
988
A
GLU
989
n
140
GLU
989
A
THR
990
n
141
THR
990
A
PRO
991
n
142
PRO
991
A
ALA
992
n
143
ALA
992
A
GLY
993
n
144
GLY
993
A
TYR
994
n
145
TYR
994
A
ALA
995
n
146
ALA
995
A
GLY
996
n
147
GLY
996
A
LEU
997
n
148
LEU
997
A
CYS
998
n
149
CYS
998
A
GLN
999
n
150
GLN
999
A
ALA
1000
n
151
ALA
1000
A
HIS
1001
n
152
HIS
1001
A
TYR
1002
n
153
TYR
1002
A
LYS
1003
n
154
LYS
1003
A
GLU
1004
n
155
GLU
1004
A
TYR
1005
n
156
TYR
1005
A
LEU
1006
n
157
LEU
1006
A
VAL
1007
n
158
VAL
1007
A
SER
1008
n
159
SER
1008
A
LEU
1009
n
160
LEU
1009
A
ILE
1010
n
161
ILE
1010
A
ASN
1011
n
162
ASN
1011
A
ALA
1012
n
163
ALA
1012
A
HIS
1013
n
164
HIS
1013
A
SER
1014
n
165
SER
1014
A
LEU
1015
n
166
LEU
1015
A
ASP
1016
n
167
ASP
1016
A
PRO
1017
n
168
PRO
1017
A
ALA
1018
n
169
ALA
1018
A
THR
1019
n
170
THR
1019
A
LEU
1020
n
171
LEU
1020
A
TYR
1021
n
172
TYR
1021
A
GLU
1022
n
173
GLU
1022
A
VAL
1023
n
174
VAL
1023
A
GLU
1024
n
175
GLU
1024
A
GLU
1025
n
176
GLU
1025
A
LEU
1026
n
177
LEU
1026
A
GLU
1027
n
178
GLU
1027
A
THR
1028
n
179
THR
1028
A
ALA
1029
n
180
ALA
1029
A
THR
1030
n
181
THR
1030
A
GLU
1031
n
182
GLU
1031
A
ARG
1032
n
183
ARG
1032
A
TYR
1033
n
184
TYR
1033
A
LEU
1034
n
185
LEU
1034
A
HIS
1035
n
186
HIS
1035
A
VAL
1036
n
187
VAL
1036
A
ARG
1037
n
188
ARG
1037
A
PRO
1038
n
189
PRO
1038
A
GLN
1039
n
190
GLN
1039
A
PRO
1040
n
191
PRO
1040
A
LEU
1041
n
192
LEU
1041
A
ALA
1042
n
193
ALA
1042
A
GLY
1043
n
194
GLY
1043
A
GLU
1044
n
195
GLU
1044
A
ASP
1045
n
196
ASP
1045
A
PRO
1046
n
197
PRO
1046
A
PRO
1047
n
198
PRO
1047
A
ALA
1048
n
199
ALA
1048
A
TYR
1049
n
200
TYR
1049
A
GLN
1050
n
201
GLN
1050
A
ALA
1051
n
202
ALA
1051
A
ARG
1052
n
203
ARG
1052
A
LEU
1053
n
204
LEU
1053
A
LEU
1054
n
205
LEU
1054
A
GLN
1055
n
206
GLN
1055
A
LYS
1056
n
207
LYS
1056
A
LEU
1057
n
208
LEU
1057
A
THR
1058
n
209
THR
1058
A
GLU
1059
n
210
GLU
1059
A
GLU
1060
n
211
GLU
1060
A
VAL
1061
n
212
VAL
1061
A
PRO
1062
n
213
PRO
1062
A
LEU
1063
n
214
LEU
1063
A
GLY
1064
n
215
GLY
1064
A
GLN
1065
n
216
GLN
1065
A
SER
1066
n
217
SER
1066
A
ILE
1067
n
218
ILE
1067
A
PRO
1068
n
219
PRO
1068
A
ARG
1069
n
220
ARG
1069
A
ARG
1070
n
221
ARG
1070
A
ARG
1071
n
222
ARG
1071
A
n
223
1072
A
MET
1
n
1
MET
1
B
GLN
2
n
2
GLN
2
B
ILE
3
n
3
ILE
3
B
PHE
4
n
4
PHE
4
B
VAL
5
n
5
VAL
5
B
LYS
6
n
6
LYS
6
B
THR
7
n
7
THR
7
B
LEU
8
n
8
LEU
8
B
THR
9
n
9
THR
9
B
GLY
10
n
10
GLY
10
B
LYS
11
n
11
LYS
11
B
THR
12
n
12
THR
12
B
ILE
13
n
13
ILE
13
B
THR
14
n
14
THR
14
B
LEU
15
n
15
LEU
15
B
GLU
16
n
16
GLU
16
B
VAL
17
n
17
VAL
17
B
GLU
18
n
18
GLU
18
B
PRO
19
n
19
PRO
19
B
SER
20
n
20
SER
20
B
ASP
21
n
21
ASP
21
B
THR
22
n
22
THR
22
B
ILE
23
n
23
ILE
23
B
GLU
24
n
24
GLU
24
B
ASN
25
n
25
ASN
25
B
VAL
26
n
26
VAL
26
B
LYS
27
n
27
LYS
27
B
ALA
28
n
28
ALA
28
B
LYS
29
n
29
LYS
29
B
ILE
30
n
30
ILE
30
B
GLN
31
n
31
GLN
31
B
ASP
32
n
32
ASP
32
B
LYS
33
n
33
LYS
33
B
GLU
34
n
34
GLU
34
B
GLY
35
n
35
GLY
35
B
ILE
36
n
36
ILE
36
B
PRO
37
n
37
PRO
37
B
PRO
38
n
38
PRO
38
B
ASP
39
n
39
ASP
39
B
GLN
40
n
40
GLN
40
B
GLN
41
n
41
GLN
41
B
ARG
42
n
42
ARG
42
B
LEU
43
n
43
LEU
43
B
ILE
44
n
44
ILE
44
B
PHE
45
n
45
PHE
45
B
ALA
46
n
46
ALA
46
B
GLY
47
n
47
GLY
47
B
LYS
48
n
48
LYS
48
B
GLN
49
n
49
GLN
49
B
LEU
50
n
50
LEU
50
B
GLU
51
n
51
GLU
51
B
ASP
52
n
52
ASP
52
B
GLY
53
n
53
GLY
53
B
ARG
54
n
54
ARG
54
B
THR
55
n
55
THR
55
B
LEU
56
n
56
LEU
56
B
SER
57
n
57
SER
57
B
ASP
58
n
58
ASP
58
B
TYR
59
n
59
TYR
59
B
ASN
60
n
60
ASN
60
B
ILE
61
n
61
ILE
61
B
GLN
62
n
62
GLN
62
B
LYS
63
n
63
LYS
63
B
GLU
64
n
64
GLU
64
B
SER
65
n
65
SER
65
B
THR
66
n
66
THR
66
B
LEU
67
n
67
LEU
67
B
HIS
68
n
68
HIS
68
B
LEU
69
n
69
LEU
69
B
VAL
70
n
70
VAL
70
B
LEU
71
n
71
LEU
71
B
ARG
72
n
72
ARG
72
B
LEU
73
n
73
LEU
73
B
ARG
74
n
74
ARG
74
B
GLY
75
n
75
GLY
75
B
GLY
76
n
76
GLY
76
B
3.2813
-4.3493
-1.6660
8.4769
2.8500
6.2392
-0.2512
-0.1126
0.1807
0.5493
0.0696
-0.0410
-0.1156
0.1193
0.1905
0.4082
0.1075
0.0626
0.3121
0.0325
0.2815
refined
-15.1544
46.8080
17.3213
X-RAY DIFFRACTION
7.4308
-1.2919
-0.7063
2.8978
0.7702
4.6080
-0.0298
0.5963
0.2553
-0.2045
-0.0370
0.5624
-0.3459
-0.6010
0.0750
0.3259
0.0895
-0.0359
0.3129
0.0361
0.2879
refined
-17.9879
50.1785
0.8215
X-RAY DIFFRACTION
3.2305
0.5525
-0.8910
3.2007
-0.0276
3.7752
-0.2732
-0.3719
-0.7253
0.3886
-0.0928
-0.2067
0.8663
0.6626
0.2949
0.5578
0.2556
0.0657
0.3988
0.0480
0.3673
refined
-5.8153
33.1396
11.7477
X-RAY DIFFRACTION
3.2761
0.5522
-2.6105
3.1328
-2.1083
5.4621
0.1291
0.6358
0.4333
-0.5508
0.1745
0.0160
-0.9803
-0.5737
-0.2743
0.4972
0.0614
0.0547
0.4953
0.0505
0.3222
refined
-3.2669
51.5709
-12.0920
X-RAY DIFFRACTION
9.2478
-0.0773
-5.5385
2.3366
0.0353
3.3106
0.2661
-0.9347
-0.1150
0.8162
0.0901
-0.0179
-1.4920
1.2225
0.0208
0.5467
-0.0210
0.0010
0.4919
-0.0559
0.3128
refined
-3.7607
54.3204
7.9290
X-RAY DIFFRACTION
9.4767
0.5903
0.4481
4.3487
0.0320
1.9897
-0.1867
0.2015
-0.2740
0.4327
0.0141
-0.3353
0.2238
0.0338
0.1624
0.3760
0.1185
-0.0194
0.3618
-0.0258
0.2904
refined
-16.9424
34.0321
-3.7097
X-RAY DIFFRACTION
7.7810
5.8802
-1.6499
5.0357
-2.1213
6.5382
-0.2722
0.3032
0.4405
0.1858
0.0139
0.2479
-0.5391
-0.7405
0.1736
0.3055
0.1824
-0.0759
0.4438
-0.0958
0.3493
refined
-23.8293
42.6363
-6.1267
X-RAY DIFFRACTION
6.1056
3.3154
-2.1568
3.6808
-4.2848
6.5816
-0.3597
1.3697
0.1221
-0.5751
0.3059
0.4126
0.2213
-0.5640
-0.1019
0.2324
-0.0051
-0.0310
0.6422
-0.0778
0.3720
refined
-21.8015
38.6168
-15.6378
X-RAY DIFFRACTION
6.4128
-5.8453
-0.2711
8.1259
0.0466
6.9809
-0.1362
1.1194
-0.5332
-0.4724
0.0057
1.0551
0.6014
-1.1130
0.2627
0.2915
-0.1079
0.0220
0.7216
-0.0791
0.5503
refined
-31.4015
32.7316
-10.5229
X-RAY DIFFRACTION
3.7796
-3.8225
4.8861
7.0845
-3.4841
6.9730
-0.2526
-1.3428
0.1801
0.6756
0.0611
0.4520
0.0863
-1.1994
0.2220
0.3890
0.0208
0.0637
0.6032
-0.0687
0.3188
refined
-29.8568
33.2329
-0.4311
X-RAY DIFFRACTION
5.0387
-0.3963
-5.4776
1.2614
0.0224
6.0837
-0.6698
1.1530
-1.1425
-0.2585
0.0013
-0.0421
0.8181
-0.5396
0.5783
0.3251
0.0112
-0.0187
0.5347
-0.1092
0.2157
refined
-20.4001
31.4395
-10.8243
X-RAY DIFFRACTION
7.4947
-4.6580
-5.2781
5.3668
5.8967
6.8911
-0.0325
-0.2493
0.0901
-0.3676
-0.1569
0.5199
-0.3795
1.0719
0.4119
0.2962
-0.1336
-0.0221
0.5281
-0.1450
0.2892
refined
-22.4993
37.5597
-26.7189
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 857 through 895 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 896 through 938 )
X-RAY DIFFRACTION
3
chain 'A' and (resid 939 through 1012 )
X-RAY DIFFRACTION
4
chain 'A' and (resid 1013 through 1060 )
X-RAY DIFFRACTION
5
chain 'A' and (resid 1061 through 1071 )
X-RAY DIFFRACTION
6
chain 'B' and (resid 1 through 16 )
X-RAY DIFFRACTION
7
chain 'B' and (resid 17 through 34 )
X-RAY DIFFRACTION
8
chain 'B' and (resid 35 through 44 )
X-RAY DIFFRACTION
9
chain 'B' and (resid 45 through 54 )
X-RAY DIFFRACTION
10
chain 'B' and (resid 55 through 65 )
X-RAY DIFFRACTION
11
chain 'B' and (resid 66 through 71 )
X-RAY DIFFRACTION
12
chain 'B' and (resid 72 through 76 )
author_and_software_defined_assembly
PISA
2
dimeric
1480
-3
16640
A
CYS
871
A
SG
CYS
22
1_555
A
ZN
1101
C
ZN
ZN
1_555
A
CYS
874
A
SG
CYS
25
1_555
106.3
A
CYS
871
A
SG
CYS
22
1_555
A
ZN
1101
C
ZN
ZN
1_555
A
CYS
890
A
SG
CYS
41
1_555
109.6
A
CYS
874
A
SG
CYS
25
1_555
A
ZN
1101
C
ZN
ZN
1_555
A
CYS
890
A
SG
CYS
41
1_555
107.0
A
CYS
871
A
SG
CYS
22
1_555
A
ZN
1101
C
ZN
ZN
1_555
A
CYS
893
A
SG
CYS
44
1_555
106.6
A
CYS
874
A
SG
CYS
25
1_555
A
ZN
1101
C
ZN
ZN
1_555
A
CYS
893
A
SG
CYS
44
1_555
118.3
A
CYS
890
A
SG
CYS
41
1_555
A
ZN
1101
C
ZN
ZN
1_555
A
CYS
893
A
SG
CYS
44
1_555
108.8
A
CYS
898
A
SG
CYS
49
1_555
A
ZN
1102
D
ZN
ZN
1_555
A
CYS
901
A
SG
CYS
52
1_555
112.0
A
CYS
898
A
SG
CYS
49
1_555
A
ZN
1102
D
ZN
ZN
1_555
A
HIS
926
A
ND1
HIS
77
1_555
98.0
A
CYS
901
A
SG
CYS
52
1_555
A
ZN
1102
D
ZN
ZN
1_555
A
HIS
926
A
ND1
HIS
77
1_555
110.0
A
CYS
898
A
SG
CYS
49
1_555
A
ZN
1102
D
ZN
ZN
1_555
A
CYS
930
A
SG
CYS
81
1_555
106.0
A
CYS
901
A
SG
CYS
52
1_555
A
ZN
1102
D
ZN
ZN
1_555
A
CYS
930
A
SG
CYS
81
1_555
112.4
A
HIS
926
A
ND1
HIS
77
1_555
A
ZN
1102
D
ZN
ZN
1_555
A
CYS
930
A
SG
CYS
81
1_555
117.6
A
CYS
911
A
SG
CYS
62
1_555
A
ZN
1103
E
ZN
ZN
1_555
A
CYS
916
A
SG
CYS
67
1_555
129.5
A
CYS
911
A
SG
CYS
62
1_555
A
ZN
1103
E
ZN
ZN
1_555
A
HIS
923
A
NE2
HIS
74
1_555
103.9
A
CYS
916
A
SG
CYS
67
1_555
A
ZN
1103
E
ZN
ZN
1_555
A
HIS
923
A
NE2
HIS
74
1_555
97.4
A
CYS
911
A
SG
CYS
62
1_555
A
ZN
1103
E
ZN
ZN
1_555
A
HIS
925
A
NE2
HIS
76
1_555
93.6
A
CYS
916
A
SG
CYS
67
1_555
A
ZN
1103
E
ZN
ZN
1_555
A
HIS
925
A
NE2
HIS
76
1_555
117.7
A
HIS
923
A
NE2
HIS
74
1_555
A
ZN
1103
E
ZN
ZN
1_555
A
HIS
925
A
NE2
HIS
76
1_555
115.1
A
CYS
969
A
SG
CYS
120
1_555
A
ZN
1104
F
ZN
ZN
1_555
A
CYS
986
A
SG
CYS
137
1_555
113.4
A
CYS
969
A
SG
CYS
120
1_555
A
ZN
1104
F
ZN
ZN
1_555
A
CYS
998
A
SG
CYS
149
1_555
116.7
A
CYS
986
A
SG
CYS
137
1_555
A
ZN
1104
F
ZN
ZN
1_555
A
CYS
998
A
SG
CYS
149
1_555
111.2
A
CYS
969
A
SG
CYS
120
1_555
A
ZN
1104
F
ZN
ZN
1_555
A
HIS
1001
A
ND1
HIS
152
1_555
104.7
A
CYS
986
A
SG
CYS
137
1_555
A
ZN
1104
F
ZN
ZN
1_555
A
HIS
1001
A
ND1
HIS
152
1_555
107.6
A
CYS
998
A
SG
CYS
149
1_555
A
ZN
1104
F
ZN
ZN
1_555
A
HIS
1001
A
ND1
HIS
152
1_555
102.0
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
869
A
N
ILE
20
A
O
TYR
878
A
O
TYR
29
A
N
PHE
888
A
N
PHE
39
A
O
PHE
897
A
O
PHE
48
A
N
GLU
973
A
N
GLU
124
A
O
GLU
984
A
O
GLU
135
B
O
LEU
15
B
O
LEU
15
B
N
ILE
3
B
N
ILE
3
B
N
PHE
4
B
N
PHE
4
B
O
LEU
67
B
O
LEU
67
B
O
HIS
68
B
O
HIS
68
B
N
ILE
44
B
N
ILE
44
B
N
PHE
45
B
N
PHE
45
B
O
LYS
48
B
O
LYS
48
1
A
GLY
850
A
GLY
1
1
Y
1
A
PRO
851
A
PRO
2
1
Y
1
A
GLY
852
A
GLY
3
1
Y
1
A
PRO
853
A
PRO
4
1
Y
1
A
GLU
854
A
GLU
5
1
Y
1
A
TYR
855
A
TYR
6
1
Y
1
A
GLN
856
A
GLN
7
1
Y
1
A
LYS
1072
A
LYS
223
1
Y
1
A
PRO
958
-47.28
158.22
1
A
ASN
979
70.92
41.60
1
A
ALA
995
59.27
19.00
49.9131
0.2161
0.1757
0.1778
2.150
38.17
865
17070
5.06
97.26
1.000
1.000
0.26
1
0.91
MOLECULAR REPLACEMENT
25.55
0.90
1.11
pdb entry 4LJO
ML
FLAT BULK SOLVENT MODEL
2.150
38.17
120
2416
4
0
2292
0.008
2340
1.115
3163
16.864
900
0.071
340
0.006
421
0.2965
0.2666
2.2133
132
2697
98.00
0.3317
0.2666
2.2847
122
2682
97.00
0.2613
0.2410
2.3664
151
2570
98.00
0.2869
0.2318
2.4611
171
2664
99.00
0.3490
0.2173
2.5731
84
2800
98.00
0.3056
0.2271
2.7087
143
2639
98.00
0.3141
0.2137
2.8784
158
2576
95.00
0.2545
0.2110
3.1005
151
2539
97.00
0.2679
0.1874
3.4123
130
2623
97.00
0.1631
0.1550
3.9057
142
2654
96.00
0.1545
0.1264
4.9191
152
2575
96.00
0.1607
0.1250
38.1768
152
2670
98.00
32.703
2.15
38.17
4LJP
87792
17108
0
-3
0.094
1
9.3
5.1
99.5
refinement
PHENIX
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
refinement
CCP4
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
Mon Oct 15 17:54:16 2012 (svn )
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
2.5.2
data reduction
CCP4
data scaling
CCP4
Structure of an active ligase (HOIP-H889A)/ubiquitin transfer complex
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
A
ALA
857
A
ALA
8
HELX_P
A
GLN
865
A
GLN
16
1
1
9
A
CYS
930
A
CYS
81
HELX_P
A
ARG
935
A
ARG
86
1
2
6
A
THR
938
A
THR
89
HELX_P
A
ASN
949
A
ASN
100
1
3
12
A
CYS
998
A
CYS
149
HELX_P
A
HIS
1013
A
HIS
164
1
4
16
A
ASP
1016
A
ASP
167
HELX_P
A
TYR
1021
A
TYR
172
5
5
6
A
GLU
1022
A
GLU
173
HELX_P
A
HIS
1035
A
HIS
186
1
6
14
A
ASP
1045
A
ASP
196
HELX_P
A
VAL
1061
A
VAL
212
1
7
17
B
THR
22
B
THR
22
HELX_P
B
GLY
35
B
GLY
35
1
8
14
B
PRO
37
B
PRO
37
HELX_P
B
ASP
39
B
ASP
39
5
9
3
B
LEU
56
B
LEU
56
HELX_P
B
ASN
60
B
ASN
60
5
10
5
metalc
2.491
A
CYS
871
A
SG
CYS
22
1_555
A
ZN
1101
C
ZN
ZN
1_555
metalc
2.500
A
CYS
874
A
SG
CYS
25
1_555
A
ZN
1101
C
ZN
ZN
1_555
metalc
2.284
A
CYS
890
A
SG
CYS
41
1_555
A
ZN
1101
C
ZN
ZN
1_555
metalc
2.299
A
CYS
893
A
SG
CYS
44
1_555
A
ZN
1101
C
ZN
ZN
1_555
metalc
2.431
A
CYS
898
A
SG
CYS
49
1_555
A
ZN
1102
D
ZN
ZN
1_555
metalc
2.254
A
CYS
901
A
SG
CYS
52
1_555
A
ZN
1102
D
ZN
ZN
1_555
metalc
2.323
A
CYS
911
A
SG
CYS
62
1_555
A
ZN
1103
E
ZN
ZN
1_555
metalc
2.223
A
CYS
916
A
SG
CYS
67
1_555
A
ZN
1103
E
ZN
ZN
1_555
metalc
2.142
A
HIS
923
A
NE2
HIS
74
1_555
A
ZN
1103
E
ZN
ZN
1_555
metalc
2.121
A
HIS
925
A
NE2
HIS
76
1_555
A
ZN
1103
E
ZN
ZN
1_555
metalc
2.085
A
HIS
926
A
ND1
HIS
77
1_555
A
ZN
1102
D
ZN
ZN
1_555
metalc
2.415
A
CYS
930
A
SG
CYS
81
1_555
A
ZN
1102
D
ZN
ZN
1_555
metalc
2.382
A
CYS
969
A
SG
CYS
120
1_555
A
ZN
1104
F
ZN
ZN
1_555
metalc
2.249
A
CYS
986
A
SG
CYS
137
1_555
A
ZN
1104
F
ZN
ZN
1_555
metalc
2.406
A
CYS
998
A
SG
CYS
149
1_555
A
ZN
1104
F
ZN
ZN
1_555
metalc
2.135
A
HIS
1001
A
ND1
HIS
152
1_555
A
ZN
1104
F
ZN
ZN
1_555
LIGASE
E3 ligase-ubiquitin complex, LIGASE, HOIP, RNF31, ubiquitin, RBR ligase, E3 ligase, RING domain, IBR domain, Zinc Finger
RNF31_HUMAN
UNP
1
853
Q96EP0
PEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCPEPNCRVKKSLHGHHPRDCLF
YLRDWTALRLQKLLQDNNVMFNTEPPAGARAVPGGGCRVIEQKEVPNGLRDEACGKETPAGYAGLCQAHYKEYLVSLINA
HSLDPATLYEVEELETATERYLHVRPQPLAGEDPPAYQARLLQKLTEEVPLGQSIPRRRK
E1B9K1_BOVIN
UNP
2
77
E1B9K1
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
853
1072
4LJP
853
1072
Q96EP0
A
1
4
223
77
152
4LJP
1
76
E1B9K1
B
2
1
76
1
expression tag
GLY
850
4LJP
A
Q96EP0
UNP
1
1
expression tag
PRO
851
4LJP
A
Q96EP0
UNP
2
1
expression tag
GLY
852
4LJP
A
Q96EP0
UNP
3
1
HIS
engineered mutation
ALA
889
4LJP
A
Q96EP0
UNP
889
40
2
2
2
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
GLY
868
A
GLY
19
A
ASP
870
A
ASP
21
A
SER
877
A
SER
28
A
ALA
879
A
ALA
30
A
HIS
887
A
HIS
38
A
ALA
889
A
ALA
40
A
GLN
896
A
GLN
47
A
CYS
898
A
CYS
49
A
ILE
972
A
ILE
123
A
VAL
977
A
VAL
128
A
GLY
980
A
GLY
131
A
ALA
985
A
ALA
136
B
THR
12
B
THR
12
B
GLU
16
B
GLU
16
B
GLN
2
B
GLN
2
B
LYS
6
B
LYS
6
B
THR
66
B
THR
66
B
LEU
71
B
LEU
71
B
GLN
41
B
GLN
41
B
PHE
45
B
PHE
45
B
LYS
48
B
LYS
48
B
GLN
49
B
GLN
49
BINDING SITE FOR RESIDUE ZN A 1101
A
ZN
1101
Software
4
BINDING SITE FOR RESIDUE ZN A 1102
A
ZN
1102
Software
4
BINDING SITE FOR RESIDUE ZN A 1103
A
ZN
1103
Software
4
BINDING SITE FOR RESIDUE ZN A 1104
A
ZN
1104
Software
4
A
CYS
871
A
CYS
22
4
1_555
A
CYS
874
A
CYS
25
4
1_555
A
CYS
890
A
CYS
41
4
1_555
A
CYS
893
A
CYS
44
4
1_555
A
CYS
898
A
CYS
49
4
1_555
A
CYS
901
A
CYS
52
4
1_555
A
HIS
926
A
HIS
77
4
1_555
A
CYS
930
A
CYS
81
4
1_555
A
CYS
911
A
CYS
62
4
1_555
A
CYS
916
A
CYS
67
4
1_555
A
HIS
923
A
HIS
74
4
1_555
A
HIS
925
A
HIS
76
4
1_555
A
CYS
969
A
CYS
120
4
1_555
A
CYS
986
A
CYS
137
4
1_555
A
CYS
998
A
CYS
149
4
1_555
A
HIS
1001
A
HIS
152
4
1_555
144
P 31