0.018302
0.000000
0.000000
0.000000
0.015322
0.000000
0.000000
0.000000
0.003859
0.00000
0.00000
0.00000
Zhou, T.
Moquin, S.
Kwong, P.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
54.639
65.267
259.146
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C8 H18 N2 O4 S
238.305
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HEPES
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C3 H8 O
60.095
ISOPROPYL ALCOHOL
2-PROPANOL
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Immunity
IUNIEH
2048
1074-7613
39
245
258
10.1016/j.immuni.2013.04.012
23911655
Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies.
2013
100
1
IMAGE PLATE
2011-08-03
MAR scanner 300 mm plate
APS ID22
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
22-ID
APS
1.0000
SYNCHROTRON
APS BEAMLINE 22-ID
39828.902
envelope glycoprotein GP120
1
man
polymer
24395.684
HEAVY CHAIN OF ANTIBODY VRC01
1
man
polymer
23159.688
LIGHT CHAIN OF ANTIBODY VRC01 with N72T mutation
1
man
polymer
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
12
man
non-polymer
238.305
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
2
syn
non-polymer
60.095
ISOPROPYL ALCOHOL
1
syn
non-polymer
22.990
SODIUM ION
3
syn
non-polymer
18.015
water
145
nat
water
no
no
VWKNAETTLFCASDAKAYKTEVHNVWATHACVPTDPNPQEIHLENVTEEFNVWKNNMVEQMHTDIISLWDQSLKPCVKLT
GGSAITQACPKVTFEPIPIHYCAPAGFAILKCKDEEFNGTGLCKNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIRIKSEN
ISDNAKTIIVQLTKPVLINCARPSNGGSGSGGDIRQAYCVVNRTQWNDTLGQVAIQLRKHWNTTIIFNEPSGGDLEITTH
SFNCGGEFFYCNTSDLFNSTWNIEGTASINGTESNDNITLPCRIKQIINMWQRVGQAMYAPPIQGVIRCQSNITGILLTR
DGGNTGNNSRTNETFRPGGGDMRDNWRSELYKYKVVKIE
VWKNAETTLFCASDAKAYKTEVHNVWATHACVPTDPNPQEIHLENVTEEFNVWKNNMVEQMHTDIISLWDQSLKPCVKLT
GGSAITQACPKVTFEPIPIHYCAPAGFAILKCKDEEFNGTGLCKNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIRIKSEN
ISDNAKTIIVQLTKPVLINCARPSNGGSGSGGDIRQAYCVVNRTQWNDTLGQVAIQLRKHWNTTIIFNEPSGGDLEITTH
SFNCGGEFFYCNTSDLFNSTWNIEGTASINGTESNDNITLPCRIKQIINMWQRVGQAMYAPPIQGVIRCQSNITGILLTR
DGGNTGNNSRTNETFRPGGGDMRDNWRSELYKYKVVKIE
G
polypeptide(L)
no
no
QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAF
LELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV
SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAF
LELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV
SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
H
polypeptide(L)
no
no
EIVLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYTLTISNLESGD
FGVYYCQQYEFFGQGTKVQVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT
EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
EIVLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYTLTISNLESGD
FGVYYCQQYEFFGQGTKVQVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT
EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
L
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
n
n
n
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n
n
n
n
n
n
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n
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n
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n
n
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n
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n
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n
n
n
n
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n
n
n
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n
n
n
n
n
n
n
n
n
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n
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n
n
n
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n
n
n
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n
n
n
n
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n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
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n
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n
n
n
n
n
n
n
n
n
n
KER2018_11
sample
env
11676
Human immunodeficiency virus 1
HEK 293F
9606
Homo sapiens
plasmid
pVRC8400
sample
9606
Homo sapiens
HEK 293F
9606
Homo sapiens
plasmid
pVRC8400
sample
9606
Homo sapiens
HEK 293F
9606
Homo sapiens
plasmid
pVRC8400
1
2.84
56.76
VAPOR DIFFUSION, SITTING DROP
7.5
0.1M HEPES, 8% PEG 4000,
6.5% isopropanol, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
software
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
pdbx_struct_conn_angle
struct_conn
struct_site
struct_site_gen
repository
Initial release
Carbohydrate remediation
repository
Remediation
Database references
Database references
Other
Refinement description
Data collection
Derived calculations
Structure summary
1
0
2013-08-21
1
1
2013-09-04
1
2
2013-09-25
1
3
2014-05-07
1
4
2017-11-15
1
5
2020-07-29
_software.name
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
RCSB
Y
RCSB
2013-07-23
REL
REL
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
EPE
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
IPA
ISOPROPYL ALCOHOL
NA
SODIUM ION
HOH
water
NAG
588
4
NAG
NAG
501
G
NAG
734
4
NAG
NAG
502
G
NAG
741
4
NAG
NAG
503
G
NAG
762
4
NAG
NAG
504
G
NAG
776
4
NAG
NAG
505
G
NAG
834
4
NAG
NAG
506
G
NAG
839
4
NAG
NAG
507
G
NAG
855
4
NAG
NAG
508
G
NAG
886
4
NAG
NAG
509
G
NAG
892
4
NAG
NAG
510
G
NAG
948
4
NAG
NAG
511
G
NAG
965
4
NAG
NAG
512
G
EPE
500
5
EPE
EPE
513
G
IPA
550
6
IPA
IPA
514
G
NA
602
7
NA
NA
515
G
NA
603
7
NA
NA
516
G
EPE
501
5
EPE
EPE
501
H
NA
601
7
NA
NA
601
L
HOH
1
8
HOH
HOH
601
G
HOH
2
8
HOH
HOH
602
G
HOH
3
8
HOH
HOH
603
G
HOH
4
8
HOH
HOH
604
G
HOH
5
8
HOH
HOH
605
G
HOH
7
8
HOH
HOH
606
G
HOH
8
8
HOH
HOH
607
G
HOH
10
8
HOH
HOH
608
G
HOH
11
8
HOH
HOH
609
G
HOH
12
8
HOH
HOH
610
G
HOH
17
8
HOH
HOH
611
G
HOH
18
8
HOH
HOH
612
G
HOH
19
8
HOH
HOH
613
G
HOH
20
8
HOH
HOH
614
G
HOH
23
8
HOH
HOH
615
G
HOH
24
8
HOH
HOH
616
G
HOH
26
8
HOH
HOH
617
G
HOH
29
8
HOH
HOH
618
G
HOH
32
8
HOH
HOH
619
G
HOH
33
8
HOH
HOH
620
G
HOH
34
8
HOH
HOH
621
G
HOH
37
8
HOH
HOH
622
G
HOH
38
8
HOH
HOH
623
G
HOH
41
8
HOH
HOH
624
G
HOH
42
8
HOH
HOH
625
G
HOH
43
8
HOH
HOH
626
G
HOH
44
8
HOH
HOH
627
G
HOH
49
8
HOH
HOH
628
G
HOH
53
8
HOH
HOH
629
G
HOH
55
8
HOH
HOH
630
G
HOH
57
8
HOH
HOH
631
G
HOH
60
8
HOH
HOH
632
G
HOH
62
8
HOH
HOH
633
G
HOH
63
8
HOH
HOH
634
G
HOH
64
8
HOH
HOH
635
G
HOH
66
8
HOH
HOH
636
G
HOH
67
8
HOH
HOH
637
G
HOH
68
8
HOH
HOH
638
G
HOH
71
8
HOH
HOH
639
G
HOH
72
8
HOH
HOH
640
G
HOH
73
8
HOH
HOH
641
G
HOH
76
8
HOH
HOH
642
G
HOH
77
8
HOH
HOH
643
G
HOH
79
8
HOH
HOH
644
G
HOH
81
8
HOH
HOH
645
G
HOH
82
8
HOH
HOH
646
G
HOH
83
8
HOH
HOH
647
G
HOH
85
8
HOH
HOH
648
G
HOH
86
8
HOH
HOH
649
G
HOH
95
8
HOH
HOH
650
G
HOH
100
8
HOH
HOH
651
G
HOH
105
8
HOH
HOH
652
G
HOH
107
8
HOH
HOH
653
G
HOH
108
8
HOH
HOH
654
G
HOH
109
8
HOH
HOH
655
G
HOH
110
8
HOH
HOH
656
G
HOH
112
8
HOH
HOH
657
G
HOH
113
8
HOH
HOH
658
G
HOH
117
8
HOH
HOH
659
G
HOH
118
8
HOH
HOH
660
G
HOH
119
8
HOH
HOH
661
G
HOH
120
8
HOH
HOH
662
G
HOH
125
8
HOH
HOH
663
G
HOH
210
8
HOH
HOH
664
G
HOH
213
8
HOH
HOH
665
G
HOH
214
8
HOH
HOH
666
G
HOH
216
8
HOH
HOH
667
G
HOH
217
8
HOH
HOH
668
G
HOH
218
8
HOH
HOH
669
G
HOH
219
8
HOH
HOH
670
G
HOH
220
8
HOH
HOH
671
G
HOH
221
8
HOH
HOH
672
G
HOH
222
8
HOH
HOH
673
G
HOH
224
8
HOH
HOH
674
G
HOH
225
8
HOH
HOH
675
G
HOH
226
8
HOH
HOH
676
G
HOH
227
8
HOH
HOH
677
G
HOH
228
8
HOH
HOH
678
G
HOH
229
8
HOH
HOH
679
G
HOH
230
8
HOH
HOH
680
G
HOH
231
8
HOH
HOH
681
G
HOH
232
8
HOH
HOH
682
G
HOH
234
8
HOH
HOH
683
G
HOH
235
8
HOH
HOH
684
G
HOH
236
8
HOH
HOH
685
G
HOH
6
8
HOH
HOH
601
H
HOH
9
8
HOH
HOH
602
H
HOH
13
8
HOH
HOH
603
H
HOH
14
8
HOH
HOH
604
H
HOH
21
8
HOH
HOH
605
H
HOH
27
8
HOH
HOH
606
H
HOH
40
8
HOH
HOH
607
H
HOH
48
8
HOH
HOH
608
H
HOH
50
8
HOH
HOH
609
H
HOH
51
8
HOH
HOH
610
H
HOH
61
8
HOH
HOH
611
H
HOH
65
8
HOH
HOH
612
H
HOH
88
8
HOH
HOH
613
H
HOH
89
8
HOH
HOH
614
H
HOH
91
8
HOH
HOH
615
H
HOH
94
8
HOH
HOH
616
H
HOH
96
8
HOH
HOH
617
H
HOH
101
8
HOH
HOH
618
H
HOH
106
8
HOH
HOH
619
H
HOH
111
8
HOH
HOH
620
H
HOH
127
8
HOH
HOH
621
H
HOH
128
8
HOH
HOH
622
H
HOH
129
8
HOH
HOH
623
H
HOH
211
8
HOH
HOH
624
H
HOH
223
8
HOH
HOH
625
H
HOH
233
8
HOH
HOH
626
H
HOH
15
8
HOH
HOH
701
L
HOH
16
8
HOH
HOH
702
L
HOH
22
8
HOH
HOH
703
L
HOH
25
8
HOH
HOH
704
L
HOH
28
8
HOH
HOH
705
L
HOH
30
8
HOH
HOH
706
L
HOH
31
8
HOH
HOH
707
L
HOH
36
8
HOH
HOH
708
L
HOH
39
8
HOH
HOH
709
L
HOH
45
8
HOH
HOH
710
L
HOH
47
8
HOH
HOH
711
L
HOH
52
8
HOH
HOH
712
L
HOH
56
8
HOH
HOH
713
L
HOH
58
8
HOH
HOH
714
L
HOH
59
8
HOH
HOH
715
L
HOH
69
8
HOH
HOH
716
L
HOH
70
8
HOH
HOH
717
L
HOH
74
8
HOH
HOH
718
L
HOH
75
8
HOH
HOH
719
L
HOH
78
8
HOH
HOH
720
L
HOH
84
8
HOH
HOH
721
L
HOH
87
8
HOH
HOH
722
L
HOH
90
8
HOH
HOH
723
L
HOH
97
8
HOH
HOH
724
L
HOH
98
8
HOH
HOH
725
L
HOH
99
8
HOH
HOH
726
L
HOH
102
8
HOH
HOH
727
L
HOH
103
8
HOH
HOH
728
L
HOH
114
8
HOH
HOH
729
L
HOH
115
8
HOH
HOH
730
L
HOH
116
8
HOH
HOH
731
L
HOH
126
8
HOH
HOH
732
L
HOH
212
8
HOH
HOH
733
L
HOH
215
8
HOH
HOH
734
L
VAL
44
n
1
VAL
44
G
TRP
45
n
2
TRP
45
G
LYS
46
n
3
LYS
46
G
ASN
47
n
4
ASN
47
G
ALA
48
n
5
ALA
48
G
GLU
49
n
6
GLU
49
G
THR
50
n
7
THR
50
G
THR
51
n
8
THR
51
G
LEU
52
n
9
LEU
52
G
PHE
53
n
10
PHE
53
G
CYS
54
n
11
CYS
54
G
ALA
55
n
12
ALA
55
G
SER
56
n
13
SER
56
G
ASP
57
n
14
ASP
57
G
ALA
58
n
15
ALA
58
G
LYS
59
n
16
LYS
59
G
ALA
60
n
17
ALA
60
G
TYR
61
n
18
TYR
61
G
LYS
62
n
19
LYS
62
G
THR
63
n
20
THR
63
G
GLU
64
n
21
GLU
64
G
VAL
65
n
22
VAL
65
G
HIS
66
n
23
HIS
66
G
ASN
67
n
24
ASN
67
G
VAL
68
n
25
VAL
68
G
TRP
69
n
26
TRP
69
G
ALA
70
n
27
ALA
70
G
THR
71
n
28
THR
71
G
HIS
72
n
29
HIS
72
G
ALA
73
n
30
ALA
73
G
CYS
74
n
31
CYS
74
G
VAL
75
n
32
VAL
75
G
PRO
76
n
33
PRO
76
G
THR
77
n
34
THR
77
G
ASP
78
n
35
ASP
78
G
PRO
79
n
36
PRO
79
G
ASN
80
n
37
ASN
80
G
PRO
81
n
38
PRO
81
G
GLN
82
n
39
GLN
82
G
GLU
83
n
40
GLU
83
G
ILE
84
n
41
ILE
84
G
HIS
85
n
42
HIS
85
G
LEU
86
n
43
LEU
86
G
GLU
87
n
44
GLU
87
G
ASN
88
n
45
ASN
88
G
VAL
89
n
46
VAL
89
G
THR
90
n
47
THR
90
G
GLU
91
n
48
GLU
91
G
GLU
92
n
49
GLU
92
G
PHE
93
n
50
PHE
93
G
ASN
94
n
51
ASN
94
G
VAL
95
n
52
VAL
95
G
TRP
96
n
53
TRP
96
G
LYS
97
n
54
LYS
97
G
ASN
98
n
55
ASN
98
G
ASN
99
n
56
ASN
99
G
MET
100
n
57
MET
100
G
VAL
101
n
58
VAL
101
G
GLU
102
n
59
GLU
102
G
GLN
103
n
60
GLN
103
G
MET
104
n
61
MET
104
G
HIS
105
n
62
HIS
105
G
THR
106
n
63
THR
106
G
ASP
107
n
64
ASP
107
G
ILE
108
n
65
ILE
108
G
ILE
109
n
66
ILE
109
G
SER
110
n
67
SER
110
G
LEU
111
n
68
LEU
111
G
TRP
112
n
69
TRP
112
G
ASP
113
n
70
ASP
113
G
GLN
114
n
71
GLN
114
G
SER
115
n
72
SER
115
G
LEU
116
n
73
LEU
116
G
LYS
117
n
74
LYS
117
G
PRO
118
n
75
PRO
118
G
CYS
119
n
76
CYS
119
G
VAL
120
n
77
VAL
120
G
LYS
121
n
78
LYS
121
G
LEU
122
n
79
LEU
122
G
THR
123
n
80
THR
123
G
GLY
124
n
81
GLY
124
G
GLY
198
n
82
GLY
198
G
SER
199
n
83
SER
199
G
ALA
200
n
84
ALA
200
G
ILE
201
n
85
ILE
201
G
THR
202
n
86
THR
202
G
GLN
203
n
87
GLN
203
G
ALA
204
n
88
ALA
204
G
CYS
205
n
89
CYS
205
G
PRO
206
n
90
PRO
206
G
LYS
207
n
91
LYS
207
G
VAL
208
n
92
VAL
208
G
THR
209
n
93
THR
209
G
PHE
210
n
94
PHE
210
G
GLU
211
n
95
GLU
211
G
PRO
212
n
96
PRO
212
G
ILE
213
n
97
ILE
213
G
PRO
214
n
98
PRO
214
G
ILE
215
n
99
ILE
215
G
HIS
216
n
100
HIS
216
G
TYR
217
n
101
TYR
217
G
CYS
218
n
102
CYS
218
G
ALA
219
n
103
ALA
219
G
PRO
220
n
104
PRO
220
G
ALA
221
n
105
ALA
221
G
GLY
222
n
106
GLY
222
G
PHE
223
n
107
PHE
223
G
ALA
224
n
108
ALA
224
G
ILE
225
n
109
ILE
225
G
LEU
226
n
110
LEU
226
G
LYS
227
n
111
LYS
227
G
CYS
228
n
112
CYS
228
G
LYS
229
n
113
LYS
229
G
ASP
230
n
114
ASP
230
G
GLU
231
n
115
GLU
231
G
GLU
232
n
116
GLU
232
G
PHE
233
n
117
PHE
233
G
ASN
234
n
118
ASN
234
G
GLY
235
n
119
GLY
235
G
THR
236
n
120
THR
236
G
GLY
237
n
121
GLY
237
G
LEU
238
n
122
LEU
238
G
CYS
239
n
123
CYS
239
G
LYS
240
n
124
LYS
240
G
ASN
241
n
125
ASN
241
G
VAL
242
n
126
VAL
242
G
SER
243
n
127
SER
243
G
THR
244
n
128
THR
244
G
VAL
245
n
129
VAL
245
G
GLN
246
n
130
GLN
246
G
CYS
247
n
131
CYS
247
G
THR
248
n
132
THR
248
G
HIS
249
n
133
HIS
249
G
GLY
250
n
134
GLY
250
G
ILE
251
n
135
ILE
251
G
LYS
252
n
136
LYS
252
G
PRO
253
n
137
PRO
253
G
VAL
254
n
138
VAL
254
G
VAL
255
n
139
VAL
255
G
SER
256
n
140
SER
256
G
THR
257
n
141
THR
257
G
GLN
258
n
142
GLN
258
G
LEU
259
n
143
LEU
259
G
LEU
260
n
144
LEU
260
G
LEU
261
n
145
LEU
261
G
ASN
262
n
146
ASN
262
G
GLY
263
n
147
GLY
263
G
SER
264
n
148
SER
264
G
LEU
265
n
149
LEU
265
G
ALA
266
n
150
ALA
266
G
GLU
267
n
151
GLU
267
G
LYS
268
n
152
LYS
268
G
GLU
269
n
153
GLU
269
G
ILE
270
n
154
ILE
270
G
ARG
271
n
155
ARG
271
G
ILE
272
n
156
ILE
272
G
LYS
273
n
157
LYS
273
G
SER
274
n
158
SER
274
G
GLU
275
n
159
GLU
275
G
ASN
276
n
160
ASN
276
G
ILE
277
n
161
ILE
277
G
SER
278
n
162
SER
278
G
ASP
279
n
163
ASP
279
G
ASN
280
n
164
ASN
280
G
ALA
281
n
165
ALA
281
G
LYS
282
n
166
LYS
282
G
THR
283
n
167
THR
283
G
ILE
284
n
168
ILE
284
G
ILE
285
n
169
ILE
285
G
VAL
286
n
170
VAL
286
G
GLN
287
n
171
GLN
287
G
LEU
288
n
172
LEU
288
G
THR
289
n
173
THR
289
G
LYS
290
n
174
LYS
290
G
PRO
291
n
175
PRO
291
G
VAL
292
n
176
VAL
292
G
LEU
293
n
177
LEU
293
G
ILE
294
n
178
ILE
294
G
ASN
295
n
179
ASN
295
G
CYS
296
n
180
CYS
296
G
ALA
297
n
181
ALA
297
G
ARG
298
n
182
ARG
298
G
PRO
299
n
183
PRO
299
G
SER
300
n
184
SER
300
G
n
185
317
G
n
186
318
G
n
187
319
G
n
188
320
G
n
189
321
G
n
190
322
G
n
191
323
G
GLY
324
n
192
GLY
324
G
ASP
325
n
193
ASP
325
G
ILE
326
n
194
ILE
326
G
ARG
327
n
195
ARG
327
G
GLN
328
n
196
GLN
328
G
ALA
329
n
197
ALA
329
G
TYR
330
n
198
TYR
330
G
CYS
331
n
199
CYS
331
G
VAL
332
n
200
VAL
332
G
VAL
333
n
201
VAL
333
G
ASN
334
n
202
ASN
334
G
ARG
335
n
203
ARG
335
G
THR
336
n
204
THR
336
G
GLN
337
n
205
GLN
337
G
TRP
338
n
206
TRP
338
G
ASN
339
n
207
ASN
339
G
ASP
340
n
208
ASP
340
G
THR
341
n
209
THR
341
G
LEU
342
n
210
LEU
342
G
GLY
343
n
211
GLY
343
G
GLN
344
n
212
GLN
344
G
VAL
345
n
213
VAL
345
G
ALA
346
n
214
ALA
346
G
ILE
347
n
215
ILE
347
G
GLN
348
n
216
GLN
348
G
LEU
349
n
217
LEU
349
G
ARG
350
n
218
ARG
350
G
LYS
351
n
219
LYS
351
G
HIS
352
n
220
HIS
352
G
TRP
353
n
221
TRP
353
G
ASN
355
n
222
ASN
355
G
THR
357
n
223
THR
357
G
THR
358
n
224
THR
358
G
ILE
359
n
225
ILE
359
G
ILE
360
n
226
ILE
360
G
PHE
361
n
227
PHE
361
G
ASN
362
n
228
ASN
362
G
GLU
363
n
229
GLU
363
G
PRO
364
n
230
PRO
364
G
SER
365
n
231
SER
365
G
GLY
366
n
232
GLY
366
G
GLY
367
n
233
GLY
367
G
ASP
368
n
234
ASP
368
G
LEU
369
n
235
LEU
369
G
GLU
370
n
236
GLU
370
G
ILE
371
n
237
ILE
371
G
THR
372
n
238
THR
372
G
THR
373
n
239
THR
373
G
HIS
374
n
240
HIS
374
G
SER
375
n
241
SER
375
G
PHE
376
n
242
PHE
376
G
ASN
377
n
243
ASN
377
G
CYS
378
n
244
CYS
378
G
GLY
379
n
245
GLY
379
G
GLY
380
n
246
GLY
380
G
GLU
381
n
247
GLU
381
G
PHE
382
n
248
PHE
382
G
PHE
383
n
249
PHE
383
G
TYR
384
n
250
TYR
384
G
CYS
385
n
251
CYS
385
G
ASN
386
n
252
ASN
386
G
THR
387
n
253
THR
387
G
SER
388
n
254
SER
388
G
ASP
389
n
255
ASP
389
G
LEU
390
n
256
LEU
390
G
PHE
391
n
257
PHE
391
G
ASN
392
n
258
ASN
392
G
SER
393
n
259
SER
393
G
THR
394
n
260
THR
394
G
TRP
395
n
261
TRP
395
G
ASN
396
n
262
ASN
396
G
n
263
399
G
n
264
400
G
n
265
401
G
n
266
402
G
n
267
403
G
n
268
404
G
n
269
405
G
n
270
406
G
n
271
407
G
n
272
408
G
n
273
409
G
n
274
410
G
n
275
411
G
ASP
412
n
276
ASP
412
G
ASN
413
n
277
ASN
413
G
ILE
414
n
278
ILE
414
G
THR
415
n
279
THR
415
G
LEU
416
n
280
LEU
416
G
PRO
417
n
281
PRO
417
G
CYS
418
n
282
CYS
418
G
ARG
419
n
283
ARG
419
G
ILE
420
n
284
ILE
420
G
LYS
421
n
285
LYS
421
G
GLN
422
n
286
GLN
422
G
ILE
423
n
287
ILE
423
G
ILE
424
n
288
ILE
424
G
ASN
425
n
289
ASN
425
G
MET
426
n
290
MET
426
G
TRP
427
n
291
TRP
427
G
GLN
428
n
292
GLN
428
G
ARG
429
n
293
ARG
429
G
VAL
430
n
294
VAL
430
G
GLY
431
n
295
GLY
431
G
GLN
432
n
296
GLN
432
G
ALA
433
n
297
ALA
433
G
MET
434
n
298
MET
434
G
TYR
435
n
299
TYR
435
G
ALA
436
n
300
ALA
436
G
PRO
437
n
301
PRO
437
G
PRO
438
n
302
PRO
438
G
ILE
439
n
303
ILE
439
G
GLN
440
n
304
GLN
440
G
GLY
441
n
305
GLY
441
G
VAL
442
n
306
VAL
442
G
ILE
443
n
307
ILE
443
G
ARG
444
n
308
ARG
444
G
CYS
445
n
309
CYS
445
G
GLN
446
n
310
GLN
446
G
SER
447
n
311
SER
447
G
ASN
448
n
312
ASN
448
G
ILE
449
n
313
ILE
449
G
THR
450
n
314
THR
450
G
GLY
451
n
315
GLY
451
G
ILE
452
n
316
ILE
452
G
LEU
453
n
317
LEU
453
G
LEU
454
n
318
LEU
454
G
THR
455
n
319
THR
455
G
ARG
456
n
320
ARG
456
G
ASP
457
n
321
ASP
457
G
GLY
458
n
322
GLY
458
G
GLY
459
n
323
GLY
459
G
ASN
460
n
324
ASN
460
G
THR
461
n
325
THR
461
G
n
326
A
461
G
n
327
B
461
G
n
328
C
461
G
n
329
D
461
G
ARG
463
n
330
ARG
463
G
THR
464
n
331
THR
464
G
ASN
465
n
332
ASN
465
G
GLU
466
n
333
GLU
466
G
THR
467
n
334
THR
467
G
PHE
468
n
335
PHE
468
G
ARG
469
n
336
ARG
469
G
PRO
470
n
337
PRO
470
G
GLY
471
n
338
GLY
471
G
GLY
472
n
339
GLY
472
G
GLY
473
n
340
GLY
473
G
ASP
474
n
341
ASP
474
G
MET
475
n
342
MET
475
G
ARG
476
n
343
ARG
476
G
ASP
477
n
344
ASP
477
G
ASN
478
n
345
ASN
478
G
TRP
479
n
346
TRP
479
G
ARG
480
n
347
ARG
480
G
SER
481
n
348
SER
481
G
GLU
482
n
349
GLU
482
G
LEU
483
n
350
LEU
483
G
TYR
484
n
351
TYR
484
G
LYS
485
n
352
LYS
485
G
TYR
486
n
353
TYR
486
G
LYS
487
n
354
LYS
487
G
VAL
488
n
355
VAL
488
G
VAL
489
n
356
VAL
489
G
LYS
490
n
357
LYS
490
G
ILE
491
n
358
ILE
491
G
GLU
492
n
359
GLU
492
G
GLN
1
n
1
GLN
1
H
VAL
2
n
2
VAL
2
H
GLN
3
n
3
GLN
3
H
LEU
4
n
4
LEU
4
H
VAL
5
n
5
VAL
5
H
GLN
6
n
6
GLN
6
H
SER
7
n
7
SER
7
H
GLY
8
n
8
GLY
8
H
GLY
9
n
9
GLY
9
H
GLN
10
n
10
GLN
10
H
MET
11
n
11
MET
11
H
LYS
12
n
12
LYS
12
H
LYS
13
n
13
LYS
13
H
PRO
14
n
14
PRO
14
H
GLY
15
n
15
GLY
15
H
GLU
16
n
16
GLU
16
H
SER
17
n
17
SER
17
H
MET
18
n
18
MET
18
H
ARG
19
n
19
ARG
19
H
ILE
20
n
20
ILE
20
H
SER
21
n
21
SER
21
H
CYS
22
n
22
CYS
22
H
ARG
23
n
23
ARG
23
H
ALA
24
n
24
ALA
24
H
SER
25
n
25
SER
25
H
GLY
26
n
26
GLY
26
H
TYR
27
n
27
TYR
27
H
GLU
28
n
28
GLU
28
H
PHE
29
n
29
PHE
29
H
ILE
30
n
30
ILE
30
H
ASP
31
n
31
ASP
31
H
CYS
32
n
32
CYS
32
H
THR
33
n
33
THR
33
H
LEU
34
n
34
LEU
34
H
ASN
35
n
35
ASN
35
H
TRP
36
n
36
TRP
36
H
ILE
37
n
37
ILE
37
H
ARG
38
n
38
ARG
38
H
LEU
39
n
39
LEU
39
H
ALA
40
n
40
ALA
40
H
PRO
41
n
41
PRO
41
H
GLY
42
n
42
GLY
42
H
LYS
43
n
43
LYS
43
H
ARG
44
n
44
ARG
44
H
PRO
45
n
45
PRO
45
H
GLU
46
n
46
GLU
46
H
TRP
47
n
47
TRP
47
H
MET
48
n
48
MET
48
H
GLY
49
n
49
GLY
49
H
TRP
50
n
50
TRP
50
H
LEU
51
n
51
LEU
51
H
LYS
52
n
52
LYS
52
H
PRO
52
n
53
A
PRO
52
H
ARG
53
n
54
ARG
53
H
GLY
54
n
55
GLY
54
H
GLY
55
n
56
GLY
55
H
ALA
56
n
57
ALA
56
H
VAL
57
n
58
VAL
57
H
ASN
58
n
59
ASN
58
H
TYR
59
n
60
TYR
59
H
ALA
60
n
61
ALA
60
H
ARG
61
n
62
ARG
61
H
PRO
62
n
63
PRO
62
H
LEU
63
n
64
LEU
63
H
GLN
64
n
65
GLN
64
H
GLY
65
n
66
GLY
65
H
ARG
66
n
67
ARG
66
H
VAL
67
n
68
VAL
67
H
THR
68
n
69
THR
68
H
MET
69
n
70
MET
69
H
THR
70
n
71
THR
70
H
ARG
71
n
72
ARG
71
H
ASP
72
n
73
ASP
72
H
VAL
73
n
74
VAL
73
H
TYR
74
n
75
TYR
74
H
SER
75
n
76
SER
75
H
ASP
76
n
77
ASP
76
H
THR
77
n
78
THR
77
H
ALA
78
n
79
ALA
78
H
PHE
79
n
80
PHE
79
H
LEU
80
n
81
LEU
80
H
GLU
81
n
82
GLU
81
H
LEU
82
n
83
LEU
82
H
ARG
82
n
84
A
ARG
82
H
SER
82
n
85
B
SER
82
H
LEU
82
n
86
C
LEU
82
H
THR
83
n
87
THR
83
H
VAL
84
n
88
VAL
84
H
ASP
85
n
89
ASP
85
H
ASP
86
n
90
ASP
86
H
THR
87
n
91
THR
87
H
ALA
88
n
92
ALA
88
H
VAL
89
n
93
VAL
89
H
TYR
90
n
94
TYR
90
H
PHE
91
n
95
PHE
91
H
CYS
92
n
96
CYS
92
H
THR
93
n
97
THR
93
H
ARG
94
n
98
ARG
94
H
GLY
95
n
99
GLY
95
H
LYS
96
n
100
LYS
96
H
ASN
97
n
101
ASN
97
H
CYS
98
n
102
CYS
98
H
ASP
99
n
103
ASP
99
H
TYR
100
n
104
TYR
100
H
ASN
100
n
105
A
ASN
100
H
TRP
100
n
106
B
TRP
100
H
ASP
100
n
107
C
ASP
100
H
PHE
100
n
108
D
PHE
100
H
GLU
101
n
109
GLU
101
H
HIS
102
n
110
HIS
102
H
TRP
103
n
111
TRP
103
H
GLY
104
n
112
GLY
104
H
ARG
105
n
113
ARG
105
H
GLY
106
n
114
GLY
106
H
THR
107
n
115
THR
107
H
PRO
108
n
116
PRO
108
H
VAL
109
n
117
VAL
109
H
ILE
110
n
118
ILE
110
H
VAL
111
n
119
VAL
111
H
SER
112
n
120
SER
112
H
SER
113
n
121
SER
113
H
PRO
114
n
122
PRO
114
H
SER
115
n
123
SER
115
H
THR
116
n
124
THR
116
H
LYS
117
n
125
LYS
117
H
GLY
118
n
126
GLY
118
H
PRO
119
n
127
PRO
119
H
SER
120
n
128
SER
120
H
VAL
121
n
129
VAL
121
H
PHE
122
n
130
PHE
122
H
PRO
123
n
131
PRO
123
H
LEU
124
n
132
LEU
124
H
ALA
125
n
133
ALA
125
H
PRO
126
n
134
PRO
126
H
SER
127
n
135
SER
127
H
SER
128
n
136
SER
128
H
LYS
129
n
137
LYS
129
H
SER
130
n
138
SER
130
H
THR
131
n
139
THR
131
H
SER
132
n
140
SER
132
H
GLY
133
n
141
GLY
133
H
GLY
134
n
142
GLY
134
H
THR
135
n
143
THR
135
H
ALA
136
n
144
ALA
136
H
ALA
137
n
145
ALA
137
H
LEU
138
n
146
LEU
138
H
GLY
139
n
147
GLY
139
H
CYS
140
n
148
CYS
140
H
LEU
141
n
149
LEU
141
H
VAL
142
n
150
VAL
142
H
LYS
143
n
151
LYS
143
H
ASP
144
n
152
ASP
144
H
TYR
145
n
153
TYR
145
H
PHE
146
n
154
PHE
146
H
PRO
147
n
155
PRO
147
H
GLU
148
n
156
GLU
148
H
PRO
149
n
157
PRO
149
H
VAL
150
n
158
VAL
150
H
THR
151
n
159
THR
151
H
VAL
152
n
160
VAL
152
H
SER
153
n
161
SER
153
H
TRP
154
n
162
TRP
154
H
ASN
155
n
163
ASN
155
H
SER
156
n
164
SER
156
H
GLY
157
n
165
GLY
157
H
ALA
158
n
166
ALA
158
H
LEU
159
n
167
LEU
159
H
THR
160
n
168
THR
160
H
SER
161
n
169
SER
161
H
GLY
162
n
170
GLY
162
H
VAL
163
n
171
VAL
163
H
HIS
164
n
172
HIS
164
H
THR
165
n
173
THR
165
H
PHE
166
n
174
PHE
166
H
PRO
167
n
175
PRO
167
H
ALA
168
n
176
ALA
168
H
VAL
169
n
177
VAL
169
H
LEU
170
n
178
LEU
170
H
GLN
171
n
179
GLN
171
H
SER
172
n
180
SER
172
H
SER
173
n
181
SER
173
H
GLY
174
n
182
GLY
174
H
LEU
175
n
183
LEU
175
H
TYR
176
n
184
TYR
176
H
SER
177
n
185
SER
177
H
LEU
178
n
186
LEU
178
H
SER
179
n
187
SER
179
H
SER
180
n
188
SER
180
H
VAL
181
n
189
VAL
181
H
VAL
182
n
190
VAL
182
H
THR
183
n
191
THR
183
H
VAL
184
n
192
VAL
184
H
PRO
185
n
193
PRO
185
H
SER
186
n
194
SER
186
H
SER
187
n
195
SER
187
H
SER
188
n
196
SER
188
H
LEU
189
n
197
LEU
189
H
GLY
190
n
198
GLY
190
H
THR
191
n
199
THR
191
H
GLN
192
n
200
GLN
192
H
THR
193
n
201
THR
193
H
TYR
194
n
202
TYR
194
H
ILE
195
n
203
ILE
195
H
CYS
196
n
204
CYS
196
H
ASN
197
n
205
ASN
197
H
VAL
198
n
206
VAL
198
H
ASN
199
n
207
ASN
199
H
HIS
200
n
208
HIS
200
H
LYS
201
n
209
LYS
201
H
PRO
202
n
210
PRO
202
H
SER
203
n
211
SER
203
H
ASN
204
n
212
ASN
204
H
THR
205
n
213
THR
205
H
LYS
206
n
214
LYS
206
H
VAL
207
n
215
VAL
207
H
ASP
208
n
216
ASP
208
H
LYS
209
n
217
LYS
209
H
LYS
210
n
218
LYS
210
H
VAL
211
n
219
VAL
211
H
GLU
212
n
220
GLU
212
H
PRO
213
n
221
PRO
213
H
LYS
214
n
222
LYS
214
H
SER
215
n
223
SER
215
H
CYS
216
n
224
CYS
216
H
n
1
1
L
n
2
2
L
VAL
3
n
3
VAL
3
L
LEU
4
n
4
LEU
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
SER
7
n
7
SER
7
L
PRO
8
n
8
PRO
8
L
GLY
9
n
9
GLY
9
L
THR
10
n
10
THR
10
L
LEU
11
n
11
LEU
11
L
SER
12
n
12
SER
12
L
LEU
13
n
13
LEU
13
L
SER
14
n
14
SER
14
L
PRO
15
n
15
PRO
15
L
GLY
16
n
16
GLY
16
L
GLU
17
n
17
GLU
17
L
THR
18
n
18
THR
18
L
ALA
19
n
19
ALA
19
L
ILE
20
n
20
ILE
20
L
ILE
21
n
21
ILE
21
L
SER
22
n
22
SER
22
L
CYS
23
n
23
CYS
23
L
ARG
24
n
24
ARG
24
L
THR
25
n
25
THR
25
L
SER
26
n
26
SER
26
L
GLN
27
n
27
GLN
27
L
TYR
28
n
28
TYR
28
L
GLY
29
n
29
GLY
29
L
SER
30
n
30
SER
30
L
LEU
33
n
31
LEU
33
L
ALA
34
n
32
ALA
34
L
TRP
35
n
33
TRP
35
L
TYR
36
n
34
TYR
36
L
GLN
37
n
35
GLN
37
L
GLN
38
n
36
GLN
38
L
ARG
39
n
37
ARG
39
L
PRO
40
n
38
PRO
40
L
GLY
41
n
39
GLY
41
L
GLN
42
n
40
GLN
42
L
ALA
43
n
41
ALA
43
L
PRO
44
n
42
PRO
44
L
ARG
45
n
43
ARG
45
L
LEU
46
n
44
LEU
46
L
VAL
47
n
45
VAL
47
L
ILE
48
n
46
ILE
48
L
TYR
49
n
47
TYR
49
L
SER
50
n
48
SER
50
L
GLY
51
n
49
GLY
51
L
SER
52
n
50
SER
52
L
THR
53
n
51
THR
53
L
ARG
54
n
52
ARG
54
L
ALA
55
n
53
ALA
55
L
ALA
56
n
54
ALA
56
L
GLY
57
n
55
GLY
57
L
ILE
58
n
56
ILE
58
L
PRO
59
n
57
PRO
59
L
ASP
60
n
58
ASP
60
L
ARG
61
n
59
ARG
61
L
PHE
62
n
60
PHE
62
L
SER
63
n
61
SER
63
L
GLY
64
n
62
GLY
64
L
SER
65
n
63
SER
65
L
ARG
66
n
64
ARG
66
L
TRP
67
n
65
TRP
67
L
GLY
68
n
66
GLY
68
L
PRO
69
n
67
PRO
69
L
ASP
70
n
68
ASP
70
L
TYR
71
n
69
TYR
71
L
THR
72
n
70
THR
72
L
LEU
73
n
71
LEU
73
L
THR
74
n
72
THR
74
L
ILE
75
n
73
ILE
75
L
SER
76
n
74
SER
76
L
ASN
77
n
75
ASN
77
L
LEU
78
n
76
LEU
78
L
GLU
79
n
77
GLU
79
L
SER
80
n
78
SER
80
L
GLY
81
n
79
GLY
81
L
ASP
82
n
80
ASP
82
L
PHE
83
n
81
PHE
83
L
GLY
84
n
82
GLY
84
L
VAL
85
n
83
VAL
85
L
TYR
86
n
84
TYR
86
L
TYR
87
n
85
TYR
87
L
CYS
88
n
86
CYS
88
L
GLN
89
n
87
GLN
89
L
GLN
90
n
88
GLN
90
L
TYR
91
n
89
TYR
91
L
GLU
96
n
90
GLU
96
L
PHE
97
n
91
PHE
97
L
PHE
98
n
92
PHE
98
L
GLY
99
n
93
GLY
99
L
GLN
100
n
94
GLN
100
L
GLY
101
n
95
GLY
101
L
THR
102
n
96
THR
102
L
LYS
103
n
97
LYS
103
L
VAL
104
n
98
VAL
104
L
GLN
105
n
99
GLN
105
L
VAL
106
n
100
VAL
106
L
ASP
107
n
101
ASP
107
L
ILE
108
n
102
ILE
108
L
LYS
109
n
103
LYS
109
L
ARG
110
n
104
ARG
110
L
THR
111
n
105
THR
111
L
VAL
112
n
106
VAL
112
L
ALA
113
n
107
ALA
113
L
ALA
114
n
108
ALA
114
L
PRO
115
n
109
PRO
115
L
SER
116
n
110
SER
116
L
VAL
117
n
111
VAL
117
L
PHE
118
n
112
PHE
118
L
ILE
119
n
113
ILE
119
L
PHE
120
n
114
PHE
120
L
PRO
121
n
115
PRO
121
L
PRO
122
n
116
PRO
122
L
SER
123
n
117
SER
123
L
ASP
124
n
118
ASP
124
L
GLU
125
n
119
GLU
125
L
GLN
126
n
120
GLN
126
L
LEU
127
n
121
LEU
127
L
LYS
128
n
122
LYS
128
L
SER
129
n
123
SER
129
L
GLY
130
n
124
GLY
130
L
THR
131
n
125
THR
131
L
ALA
132
n
126
ALA
132
L
SER
133
n
127
SER
133
L
VAL
134
n
128
VAL
134
L
VAL
135
n
129
VAL
135
L
CYS
136
n
130
CYS
136
L
LEU
137
n
131
LEU
137
L
LEU
138
n
132
LEU
138
L
ASN
139
n
133
ASN
139
L
ASN
140
n
134
ASN
140
L
PHE
141
n
135
PHE
141
L
TYR
142
n
136
TYR
142
L
PRO
143
n
137
PRO
143
L
ARG
144
n
138
ARG
144
L
GLU
145
n
139
GLU
145
L
ALA
146
n
140
ALA
146
L
LYS
147
n
141
LYS
147
L
VAL
148
n
142
VAL
148
L
GLN
149
n
143
GLN
149
L
TRP
150
n
144
TRP
150
L
LYS
151
n
145
LYS
151
L
VAL
152
n
146
VAL
152
L
ASP
153
n
147
ASP
153
L
ASN
154
n
148
ASN
154
L
ALA
155
n
149
ALA
155
L
LEU
156
n
150
LEU
156
L
GLN
157
n
151
GLN
157
L
SER
158
n
152
SER
158
L
GLY
159
n
153
GLY
159
L
ASN
160
n
154
ASN
160
L
SER
161
n
155
SER
161
L
GLN
162
n
156
GLN
162
L
GLU
163
n
157
GLU
163
L
SER
164
n
158
SER
164
L
VAL
165
n
159
VAL
165
L
THR
166
n
160
THR
166
L
GLU
167
n
161
GLU
167
L
GLN
168
n
162
GLN
168
L
ASP
169
n
163
ASP
169
L
SER
170
n
164
SER
170
L
LYS
171
n
165
LYS
171
L
ASP
172
n
166
ASP
172
L
SER
173
n
167
SER
173
L
THR
174
n
168
THR
174
L
TYR
175
n
169
TYR
175
L
SER
176
n
170
SER
176
L
LEU
177
n
171
LEU
177
L
SER
178
n
172
SER
178
L
SER
179
n
173
SER
179
L
THR
180
n
174
THR
180
L
LEU
181
n
175
LEU
181
L
THR
182
n
176
THR
182
L
LEU
183
n
177
LEU
183
L
SER
184
n
178
SER
184
L
LYS
185
n
179
LYS
185
L
ALA
186
n
180
ALA
186
L
ASP
187
n
181
ASP
187
L
TYR
188
n
182
TYR
188
L
GLU
189
n
183
GLU
189
L
LYS
190
n
184
LYS
190
L
HIS
191
n
185
HIS
191
L
LYS
192
n
186
LYS
192
L
VAL
193
n
187
VAL
193
L
TYR
194
n
188
TYR
194
L
ALA
195
n
189
ALA
195
L
CYS
196
n
190
CYS
196
L
GLU
197
n
191
GLU
197
L
VAL
198
n
192
VAL
198
L
THR
199
n
193
THR
199
L
HIS
200
n
194
HIS
200
L
GLN
201
n
195
GLN
201
L
GLY
202
n
196
GLY
202
L
LEU
203
n
197
LEU
203
L
ARG
204
n
198
ARG
204
L
SER
205
n
199
SER
205
L
PRO
206
n
200
PRO
206
L
VAL
207
n
201
VAL
207
L
THR
208
n
202
THR
208
L
LYS
209
n
203
LYS
209
L
SER
210
n
204
SER
210
L
PHE
211
n
205
PHE
211
L
ASN
212
n
206
ASN
212
L
ARG
213
n
207
ARG
213
L
GLY
214
n
208
GLY
214
L
GLU
215
n
209
GLU
215
L
CYS
216
n
210
CYS
216
L
2.8391
-1.1627
1.3981
3.1453
0.4883
4.8041
-0.0307
0.1646
0.2122
-0.2672
-0.1063
0.0180
-0.4866
-0.1574
0.1746
0.2314
-0.0225
0.0304
0.1856
-0.0071
0.2712
refined
-12.3247
18.6772
54.5757
X-RAY DIFFRACTION
3.0847
0.2056
0.1902
1.9003
0.7990
1.2812
0.0839
-0.1386
-0.1364
0.0980
-0.1448
0.2534
0.1710
-0.3217
0.0326
0.1928
-0.0216
0.0315
0.2340
-0.0103
0.2506
refined
-13.7416
-3.7653
56.2981
X-RAY DIFFRACTION
2.1452
-0.3672
-0.0267
2.5902
-0.5443
4.5259
-0.0093
0.0343
0.1194
0.0285
-0.1217
-0.4324
-0.1764
0.5810
0.0719
0.1833
-0.0064
-0.0066
0.2581
0.0059
0.2020
refined
6.3572
-9.0751
38.3425
X-RAY DIFFRACTION
2.7751
-0.6448
-1.9745
3.8400
-0.5427
6.3616
-0.1005
-0.0425
-0.3953
-0.0037
0.0240
-0.2209
0.8894
0.3032
0.0177
0.4601
0.1309
-0.0224
0.3104
0.0135
0.3948
refined
9.7025
-38.0693
8.1601
X-RAY DIFFRACTION
1.2867
0.1410
-0.8197
3.6559
1.6976
6.9068
0.0943
0.0249
0.1222
-0.2046
0.0795
-0.2664
-0.1355
0.0923
-0.1884
0.2595
0.0414
0.0082
0.2498
0.0224
0.2148
refined
0.3736
-2.7968
17.0809
X-RAY DIFFRACTION
5.0052
2.9799
-0.7345
6.4313
-2.0664
4.5128
0.1585
-0.1484
-0.2831
-0.1886
-0.0460
0.1477
0.3373
-0.3446
-0.1282
0.3305
-0.0041
0.0056
0.2789
-0.0675
0.2799
refined
-3.3656
-30.0604
4.0953
X-RAY DIFFRACTION
G
44
G
253
X-RAY DIFFRACTION
1
( CHAIN G AND ( RESID 44:253 OR RESID 476:492 ) )
G
476
G
492
X-RAY DIFFRACTION
1
( CHAIN G AND ( RESID 44:253 OR RESID 476:492 ) )
G
254
G
475
X-RAY DIFFRACTION
2
( CHAIN G AND RESID 254:475 )
H
1
H
114
X-RAY DIFFRACTION
3
( CHAIN H AND RESID 1:114 )
H
115
H
216
X-RAY DIFFRACTION
4
( CHAIN H AND RESID 115:216 )
L
3
L
108
X-RAY DIFFRACTION
5
( CHAIN L AND RESID 3:108 )
L
109
L
216
X-RAY DIFFRACTION
6
( CHAIN L AND RESID 109:216 )
author_defined_assembly
3
trimeric
G
PRO
118
A
O
PRO
75
1_555
G
NA
516
S
NA
NA
1_555
G
ALA
204
A
O
ALA
88
1_555
87.7
G
PRO
118
A
O
PRO
75
1_555
G
NA
516
S
NA
NA
1_555
G
HOH
665
V
O
HOH
1_555
104.0
G
ALA
204
A
O
ALA
88
1_555
G
NA
516
S
NA
NA
1_555
G
HOH
665
V
O
HOH
1_555
161.0
H
TYR
100
B
OH
TYR
104
1_555
L
NA
601
U
NA
NA
1_555
H
HOH
625
W
O
HOH
1_555
101.2
H
TYR
100
B
OH
TYR
104
1_555
L
NA
601
U
NA
NA
1_555
L
SER
30
C
O
SER
30
1_555
109.5
H
HOH
625
W
O
HOH
1_555
L
NA
601
U
NA
NA
1_555
L
SER
30
C
O
SER
30
1_555
113.7
G
ASN
241
GLYCOSYLATION SITE
A
ASN
125
ASN
G
ASN
234
GLYCOSYLATION SITE
A
ASN
118
ASN
G
ASN
465
GLYCOSYLATION SITE
A
ASN
332
ASN
G
ASN
276
GLYCOSYLATION SITE
A
ASN
160
ASN
G
ASN
392
GLYCOSYLATION SITE
A
ASN
258
ASN
G
ASN
88
GLYCOSYLATION SITE
A
ASN
45
ASN
G
ASN
262
GLYCOSYLATION SITE
A
ASN
146
ASN
G
ASN
355
GLYCOSYLATION SITE
A
ASN
222
ASN
G
ASN
448
GLYCOSYLATION SITE
A
ASN
312
ASN
G
ASN
339
GLYCOSYLATION SITE
A
ASN
207
ASN
G
ASN
334
GLYCOSYLATION SITE
A
ASN
202
ASN
G
ASN
386
GLYCOSYLATION SITE
A
ASN
252
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
G
N
LYS
46
A
N
LYS
3
G
O
LYS
490
A
O
LYS
357
G
O
LYS
487
A
O
LYS
354
G
N
LEU
226
A
N
LEU
110
G
N
LYS
227
A
N
LYS
111
G
O
SER
243
A
O
SER
127
G
O
THR
244
A
O
THR
128
G
N
ILE
84
A
N
ILE
41
G
O
VAL
75
A
O
VAL
32
G
N
CYS
54
A
N
CYS
11
G
N
PHE
53
A
N
PHE
10
G
O
CYS
218
A
O
CYS
102
G
N
GLU
91
A
N
GLU
48
G
O
CYS
239
A
O
CYS
123
G
O
ILE
201
A
O
ILE
85
G
N
LYS
121
A
N
LYS
78
G
N
VAL
120
A
N
VAL
77
G
O
MET
434
A
O
MET
298
G
O
ALA
433
A
O
ALA
297
G
N
ILE
424
A
N
ILE
288
G
N
LEU
260
A
N
LEU
144
G
O
THR
450
A
O
THR
314
G
O
ILE
452
A
O
ILE
316
G
N
VAL
286
A
N
VAL
170
G
N
ALA
297
A
N
ALA
181
G
O
TYR
330
A
O
TYR
198
G
N
VAL
333
A
N
VAL
201
G
O
ILE
414
A
O
ILE
278
G
O
ARG
419
A
O
ARG
283
G
N
TYR
384
A
N
TYR
250
G
O
PHE
383
A
O
PHE
249
G
N
PHE
376
A
N
PHE
242
G
N
LYS
273
A
N
LYS
157
G
O
ILE
285
A
O
ILE
169
G
N
VAL
286
A
N
VAL
170
G
O
ILE
452
A
O
ILE
316
G
N
THR
455
A
N
THR
319
G
O
ARG
469
A
O
ARG
336
G
O
GLU
466
A
O
GLU
333
G
N
ILE
360
A
N
ILE
226
G
N
PHE
361
A
N
PHE
227
G
O
SER
393
A
O
SER
259
H
N
VAL
5
B
N
VAL
5
H
O
ARG
23
B
O
ARG
23
H
N
CYS
22
B
N
CYS
22
H
O
ALA
78
B
O
ALA
79
H
O
GLU
81
B
O
GLU
82
H
N
THR
68
B
N
THR
69
H
N
LYS
12
B
N
LYS
12
H
O
ILE
110
B
O
ILE
118
H
O
THR
107
B
O
THR
115
H
N
TYR
90
B
N
TYR
94
H
O
PHE
91
B
O
PHE
95
H
N
ILE
37
B
N
ILE
37
H
N
TRP
36
B
N
TRP
36
H
O
MET
48
B
O
MET
48
H
N
LYS
52
B
N
LYS
52
H
O
ALA
56
B
O
ALA
57
H
N
LYS
12
B
N
LYS
12
H
O
ILE
110
B
O
ILE
118
H
O
THR
107
B
O
THR
115
H
N
TYR
90
B
N
TYR
94
H
N
ASN
97
B
N
ASN
101
H
O
TYR
100
B
O
TYR
104
H
N
LEU
124
B
N
LEU
132
H
O
GLY
139
B
O
GLY
147
H
N
ALA
136
B
N
ALA
144
H
O
VAL
184
B
O
VAL
192
H
O
VAL
181
B
O
VAL
189
H
N
HIS
164
B
N
HIS
172
H
N
LEU
124
B
N
LEU
132
H
O
GLY
139
B
O
GLY
147
H
N
ALA
136
B
N
ALA
144
H
O
VAL
184
B
O
VAL
192
H
O
SER
177
B
O
SER
185
H
N
VAL
169
B
N
VAL
177
H
N
SER
153
B
N
SER
161
H
O
ASN
197
B
O
ASN
205
H
N
VAL
198
B
N
VAL
206
H
O
VAL
207
B
O
VAL
215
L
N
THR
5
C
N
THR
5
L
O
ARG
24
C
O
ARG
24
L
N
ILE
21
C
N
ILE
21
L
O
LEU
73
C
O
LEU
71
L
O
THR
74
C
O
THR
72
L
N
SER
63
C
N
SER
61
L
N
LEU
11
C
N
LEU
11
L
O
LYS
103
C
O
LYS
97
L
O
VAL
104
C
O
VAL
98
L
N
GLY
84
C
N
GLY
82
L
O
TYR
87
C
O
TYR
85
L
N
TYR
36
C
N
TYR
34
L
N
TRP
35
C
N
TRP
33
L
O
VAL
47
C
O
VAL
45
L
N
TYR
49
C
N
TYR
47
L
O
THR
53
C
O
THR
51
L
N
LEU
11
C
N
LEU
11
L
O
LYS
103
C
O
LYS
97
L
O
VAL
104
C
O
VAL
98
L
N
GLY
84
C
N
GLY
82
L
N
GLN
90
C
N
GLN
88
L
O
PHE
97
C
O
PHE
91
L
N
PHE
118
C
N
PHE
112
L
O
LEU
137
C
O
LEU
131
L
N
VAL
134
C
N
VAL
128
L
O
LEU
181
C
O
LEU
175
L
O
THR
180
C
O
THR
174
L
N
GLN
162
C
N
GLN
156
L
O
ALA
155
C
O
ALA
149
L
N
VAL
152
C
N
VAL
146
L
N
GLN
149
C
N
GLN
143
L
O
GLU
197
C
O
GLU
191
L
N
VAL
198
C
N
VAL
192
L
O
VAL
207
C
O
VAL
201
1
G
ASN
317
A
ASN
185
1
Y
1
G
GLY
318
A
GLY
186
1
Y
1
G
GLY
319
A
GLY
187
1
Y
1
G
SER
320
A
SER
188
1
Y
1
G
GLY
321
A
GLY
189
1
Y
1
G
SER
322
A
SER
190
1
Y
1
G
GLY
323
A
GLY
191
1
Y
1
G
ILE
399
A
ILE
263
1
Y
1
G
GLU
400
A
GLU
264
1
Y
1
G
GLY
401
A
GLY
265
1
Y
1
G
THR
402
A
THR
266
1
Y
1
G
ALA
403
A
ALA
267
1
Y
1
G
SER
404
A
SER
268
1
Y
1
G
ILE
405
A
ILE
269
1
Y
1
G
ASN
406
A
ASN
270
1
Y
1
G
GLY
407
A
GLY
271
1
Y
1
G
THR
408
A
THR
272
1
Y
1
G
GLU
409
A
GLU
273
1
Y
1
G
SER
410
A
SER
274
1
Y
1
G
ASN
411
A
ASN
275
1
Y
A
1
G
GLY
461
A
GLY
326
1
Y
B
1
G
ASN
461
A
ASN
327
1
Y
C
1
G
ASN
461
A
ASN
328
1
Y
D
1
G
SER
461
A
SER
329
1
Y
1
L
GLU
1
C
GLU
1
1
Y
1
L
ILE
2
C
ILE
2
1
Y
1
G
G
ND2
C2
ASN
NAG
241
503
1.91
1
G
G
ND2
C2
ASN
NAG
448
511
2.02
1
G
G
ND2
C2
ASN
NAG
392
510
2.14
1
L
L
O
NH1
HIS
ARG
191
213
2.17
1
L
L
OG
O
SER
HOH
30
704
2.17
1
G
ASP
57
-106.19
40.63
1
G
ASN
88
46.64
21.21
1
G
SER
199
55.84
118.27
1
G
GLN
258
71.51
-54.96
1
G
LYS
351
100.27
-42.92
1
G
ASN
392
-160.24
77.37
1
G
CYS
445
-170.57
118.14
1
G
THR
464
-73.39
-72.63
1
H
ARG
53
-40.73
-75.37
1
H
ASP
76
38.96
44.90
1
H
SER
127
-144.73
-102.93
1
H
SER
128
35.57
-77.47
1
H
LYS
129
175.13
88.53
1
H
SER
130
50.84
16.70
1
H
THR
131
62.06
-44.53
1
H
SER
132
-165.22
-160.55
1
H
PHE
146
-175.35
143.82
1
H
PRO
147
-79.56
-165.00
1
H
THR
160
-131.39
-42.13
1
H
ASN
204
32.81
67.13
1
H
PRO
213
-61.49
-160.45
1
L
SER
52
-145.21
11.84
1
L
SER
76
-80.10
-75.53
1
L
TYR
91
54.74
-123.76
1
L
LYS
128
-78.52
22.65
1
L
SER
129
-142.04
14.46
1
L
ASN
154
82.95
-1.17
1.7004
-0.0000
0.0000
-3.6834
0.0000
1.9830
0.2630
0.1916
0.1953
2.59
32.393
1388
29955
27223
5.10
90.88
1.000
1.000
0.44
1
0.00
MOLECULAR REPLACEMENT
26.60
0.86
1.10
ML
FLAT BULK SOLVENT MODEL
20.861
0.295
2.59
32.393
145
6316
205
0
5966
0.005
6330
0.891
8594
15.956
2342
0.049
972
0.003
1083
0.3628
0.3080
2.6784
112
2141
77.00
0.3626
0.2904
2.7856
131
2404
86.00
0.3461
0.2562
2.9123
157
2415
87.00
0.3011
0.2230
3.0657
112
2509
88.00
0.3162
0.2243
3.2576
142
2467
87.00
0.3114
0.2073
3.5089
141
2502
90.00
0.2916
0.1943
3.8615
129
2652
93.00
0.2261
0.1543
4.4191
137
2821
99.00
0.2015
0.1424
5.5630
159
2895
100.00
0.2142
0.1742
32.3958
168
3029
100.00
2.590
50.000
4LSS
30121
27290
2
2
0.127
0.098
1
5.900
6.800
90.600
0.727
2.590
2.630
1
3.600
68.900
0.667
2.630
2.680
1
4.400
81.700
0.731
2.680
2.730
1
5.300
84.300
0.628
2.730
2.790
1
6.000
88.700
0.573
2.790
2.850
1
6.500
86.200
0.528
2.850
2.920
1
6.900
88.400
0.444
2.920
2.990
1
7.100
88.700
0.367
2.990
3.070
1
7.100
88.100
0.291
3.070
3.160
1
7.200
86.900
0.250
3.160
3.260
1
7.200
88.400
0.206
3.260
3.380
1
7.100
89.200
0.160
3.380
3.510
1
7.100
89.900
0.140
3.510
3.670
1
7.000
90.300
0.115
3.670
3.870
1
7.000
94.400
0.096
3.870
4.110
1
7.000
97.900
0.078
4.110
4.430
1
7.200
99.900
0.072
4.430
4.870
1
7.400
100.000
0.079
4.870
5.580
1
7.600
99.900
0.078
5.580
7.020
1
7.700
100.000
0.044
7.020
50.000
1
7.100
98.500
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
dev_998
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
MAR345
data reduction
HKL-2000
HIV-1 CLADE A STRAIN KER2018_11 GP120, HEAVY CHAIN OF ANTIBODY VRC01, LIGHT CHAIN OF ANTIBODY VRC01 with N72T mutation
Crystal structure of broadly and potently neutralizing antibody VRC01 in complex with HIV-1 clade A strain KER_2018_11 gp120
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
6
N
N
7
N
N
7
N
N
5
N
N
7
N
N
8
N
N
8
N
N
8
N
N
G
GLU
64
A
GLU
21
HELX_P
G
CYS
74
A
CYS
31
1
1
11
G
ASN
98
A
ASN
55
HELX_P
G
LEU
116
A
LEU
73
1
2
19
G
ARG
335
A
ARG
203
HELX_P
G
ARG
350
A
ARG
218
1
3
16
G
ASP
368
A
ASP
234
HELX_P
G
THR
373
A
THR
239
1
4
6
G
MET
475
A
MET
342
HELX_P
G
TYR
484
A
TYR
351
1
5
10
H
GLU
28
B
GLU
28
HELX_P
H
CYS
32
B
CYS
32
5
6
5
H
ARG
61
B
ARG
62
HELX_P
H
GLN
64
B
GLN
65
5
7
4
H
THR
83
B
THR
87
HELX_P
H
THR
87
B
THR
91
5
8
5
H
SER
156
B
SER
164
HELX_P
H
ALA
158
B
ALA
166
5
9
3
H
SER
187
B
SER
195
HELX_P
H
THR
191
B
THR
199
5
10
5
H
LYS
201
B
LYS
209
HELX_P
H
ASN
204
B
ASN
212
5
11
4
L
GLU
79
C
GLU
77
HELX_P
L
PHE
83
C
PHE
81
5
12
5
L
SER
123
C
SER
117
HELX_P
L
LYS
128
C
LYS
122
1
13
6
L
LYS
185
C
LYS
179
HELX_P
L
HIS
191
C
HIS
185
1
14
7
disulf
2.032
G
CYS
54
A
SG
CYS
11
1_555
G
CYS
74
A
SG
CYS
31
1_555
disulf
2.032
G
CYS
119
A
SG
CYS
76
1_555
G
CYS
205
A
SG
CYS
89
1_555
disulf
2.039
G
CYS
218
A
SG
CYS
102
1_555
G
CYS
247
A
SG
CYS
131
1_555
disulf
2.032
G
CYS
228
A
SG
CYS
112
1_555
G
CYS
239
A
SG
CYS
123
1_555
disulf
2.034
G
CYS
296
A
SG
CYS
180
1_555
G
CYS
331
A
SG
CYS
199
1_555
disulf
2.041
G
CYS
378
A
SG
CYS
244
1_555
G
CYS
445
A
SG
CYS
309
1_555
disulf
2.034
G
CYS
385
A
SG
CYS
251
1_555
G
CYS
418
A
SG
CYS
282
1_555
disulf
2.039
H
CYS
22
B
SG
CYS
22
1_555
H
CYS
92
B
SG
CYS
96
1_555
disulf
2.035
H
CYS
32
B
SG
CYS
32
1_555
H
CYS
98
B
SG
CYS
102
1_555
disulf
2.030
H
CYS
140
B
SG
CYS
148
1_555
H
CYS
196
B
SG
CYS
204
1_555
disulf
2.037
H
CYS
216
B
SG
CYS
224
1_555
L
CYS
216
C
SG
CYS
210
1_555
disulf
2.050
L
CYS
23
C
SG
CYS
23
1_555
L
CYS
88
C
SG
CYS
86
1_555
disulf
2.041
L
CYS
136
C
SG
CYS
130
1_555
L
CYS
196
C
SG
CYS
190
1_555
covale
1.442
one
N-Glycosylation
G
ASN
88
A
ND2
ASN
45
1_555
G
NAG
501
D
C1
NAG
1_555
covale
1.437
one
N-Glycosylation
G
ASN
234
A
ND2
ASN
118
1_555
G
NAG
502
E
C1
NAG
1_555
covale
1.435
one
N-Glycosylation
G
ASN
241
A
ND2
ASN
125
1_555
G
NAG
503
F
C1
NAG
1_555
covale
1.442
one
N-Glycosylation
G
ASN
262
A
ND2
ASN
146
1_555
G
NAG
504
G
C1
NAG
1_555
covale
1.440
one
N-Glycosylation
G
ASN
276
A
ND2
ASN
160
1_555
G
NAG
505
H
C1
NAG
1_555
covale
1.444
one
N-Glycosylation
G
ASN
334
A
ND2
ASN
202
1_555
G
NAG
506
I
C1
NAG
1_555
covale
1.444
one
N-Glycosylation
G
ASN
339
A
ND2
ASN
207
1_555
G
NAG
507
J
C1
NAG
1_555
covale
1.443
one
N-Glycosylation
G
ASN
355
A
ND2
ASN
222
1_555
G
NAG
508
K
C1
NAG
1_555
covale
1.447
one
N-Glycosylation
G
ASN
386
A
ND2
ASN
252
1_555
G
NAG
509
L
C1
NAG
1_555
covale
1.440
one
N-Glycosylation
G
ASN
392
A
ND2
ASN
258
1_555
G
NAG
510
M
C1
NAG
1_555
covale
1.444
one
N-Glycosylation
G
ASN
448
A
ND2
ASN
312
1_555
G
NAG
511
N
C1
NAG
1_555
covale
1.439
one
N-Glycosylation
G
ASN
465
A
ND2
ASN
332
1_555
G
NAG
512
O
C1
NAG
1_555
metalc
3.073
G
PRO
118
A
O
PRO
75
1_555
G
NA
516
S
NA
NA
1_555
metalc
2.890
G
ALA
204
A
O
ALA
88
1_555
G
NA
516
S
NA
NA
1_555
metalc
2.458
G
NA
516
S
NA
NA
1_555
G
HOH
665
V
O
HOH
1_555
metalc
2.583
H
TYR
100
B
OH
TYR
104
1_555
L
NA
601
U
NA
NA
1_555
metalc
2.504
H
HOH
625
W
O
HOH
1_555
L
NA
601
U
NA
NA
1_555
metalc
2.523
L
SER
30
C
O
SER
30
1_555
L
NA
601
U
NA
NA
1_555
viral protein/immune system
antibody antigen complex, Neutralizing antibody VRC01, viral protein-immune system complex
G
ARG
463
A
ARG
330
1
G
THR
464
A
THR
331
12.82
H
PHE
146
B
PHE
154
1
H
PRO
147
B
PRO
155
-7.97
H
GLU
148
B
GLU
156
1
H
PRO
149
B
PRO
157
-1.92
L
SER
7
C
SER
7
1
L
PRO
8
C
PRO
8
-2.85
L
TYR
142
C
TYR
136
1
L
PRO
143
C
PRO
137
3.95
4LSS
PDB
1
4LSS
4LSS
PDB
2
4LSS
4LSS
PDB
3
4LSS
44
492
4LSS
44
492
4LSS
G
1
1
359
1
216
4LSS
1
216
4LSS
H
2
1
224
1
216
4LSS
1
216
4LSS
L
3
1
210
5
3
2
4
7
6
4
6
4
4
4
3
4
6
4
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
G
TRP
45
A
TRP
2
G
ASN
47
A
ASN
4
G
TYR
486
A
TYR
353
G
ILE
491
A
ILE
358
G
PHE
223
A
PHE
107
G
CYS
228
A
CYS
112
G
VAL
242
A
VAL
126
G
VAL
245
A
VAL
129
G
GLU
83
A
GLU
40
G
LEU
86
A
LEU
43
G
VAL
75
A
VAL
32
G
PRO
76
A
PRO
33
G
PHE
53
A
PHE
10
G
SER
56
A
SER
13
G
HIS
216
A
HIS
100
G
CYS
218
A
CYS
102
G
GLU
91
A
GLU
48
G
ASN
94
A
ASN
51
G
THR
236
A
THR
120
G
CYS
239
A
CYS
123
G
ILE
201
A
ILE
85
G
THR
202
A
THR
86
G
VAL
120
A
VAL
77
G
LEU
122
A
LEU
79
G
GLN
432
A
GLN
296
G
MET
434
A
MET
298
G
ILE
423
A
ILE
287
G
ASN
425
A
ASN
289
G
LEU
259
A
LEU
143
G
LEU
261
A
LEU
145
G
ILE
443
A
ILE
307
G
ARG
456
A
ARG
320
G
ILE
284
A
ILE
168
G
ARG
298
A
ARG
182
G
GLN
328
A
GLN
196
G
ASN
334
A
ASN
202
G
ASN
413
A
ASN
277
G
LYS
421
A
LYS
285
G
GLU
381
A
GLU
247
G
CYS
385
A
CYS
251
G
HIS
374
A
HIS
240
G
CYS
378
A
CYS
244
G
ARG
271
A
ARG
155
G
LYS
273
A
LYS
157
G
ILE
284
A
ILE
168
G
ARG
298
A
ARG
182
G
ILE
443
A
ILE
307
G
ARG
456
A
ARG
320
G
GLU
466
A
GLU
333
G
PRO
470
A
PRO
337
G
ILE
359
A
ILE
225
G
PHE
361
A
PHE
227
G
SER
393
A
SER
259
G
TRP
395
A
TRP
261
H
GLN
3
B
GLN
3
H
GLN
6
B
GLN
6
H
MET
18
B
MET
18
H
SER
25
B
SER
25
H
THR
77
B
THR
78
H
LEU
82
B
LEU
83
H
VAL
67
B
VAL
68
H
ASP
72
B
ASP
73
H
GLN
10
B
GLN
10
H
LYS
12
B
LYS
12
H
THR
107
B
THR
115
H
VAL
111
B
VAL
119
H
ALA
88
B
ALA
92
H
ASN
97
B
ASN
101
H
LEU
34
B
LEU
34
H
LEU
39
B
LEU
39
H
GLU
46
B
GLU
46
H
LYS
52
B
LYS
52
H
ALA
56
B
ALA
57
H
TYR
59
B
TYR
60
H
GLN
10
B
GLN
10
H
LYS
12
B
LYS
12
H
THR
107
B
THR
115
H
VAL
111
B
VAL
119
H
ALA
88
B
ALA
92
H
ASN
97
B
ASN
101
H
TYR
100
B
TYR
104
H
TRP
103
B
TRP
111
H
SER
120
B
SER
128
H
LEU
124
B
LEU
132
H
THR
135
B
THR
143
H
TYR
145
B
TYR
153
H
TYR
176
B
TYR
184
H
PRO
185
B
PRO
193
H
VAL
163
B
VAL
171
H
THR
165
B
THR
173
H
SER
120
B
SER
128
H
LEU
124
B
LEU
132
H
THR
135
B
THR
143
H
TYR
145
B
TYR
153
H
TYR
176
B
TYR
184
H
PRO
185
B
PRO
193
H
VAL
169
B
VAL
177
H
LEU
170
B
LEU
178
H
THR
151
B
THR
159
H
TRP
154
B
TRP
162
H
ILE
195
B
ILE
203
H
HIS
200
B
HIS
208
H
THR
205
B
THR
213
H
LYS
210
B
LYS
218
L
LEU
4
C
LEU
4
L
SER
7
C
SER
7
L
ALA
19
C
ALA
19
L
THR
25
C
THR
25
L
ASP
70
C
ASP
68
L
ILE
75
C
ILE
73
L
PHE
62
C
PHE
60
L
TRP
67
C
TRP
65
L
THR
10
C
THR
10
L
LEU
13
C
LEU
13
L
THR
102
C
THR
96
L
VAL
106
C
VAL
100
L
GLY
84
C
GLY
82
L
GLN
90
C
GLN
88
L
LEU
33
C
LEU
31
L
GLN
38
C
GLN
36
L
ARG
45
C
ARG
43
L
TYR
49
C
TYR
47
L
THR
53
C
THR
51
L
ARG
54
C
ARG
52
L
THR
10
C
THR
10
L
LEU
13
C
LEU
13
L
THR
102
C
THR
96
L
VAL
106
C
VAL
100
L
GLY
84
C
GLY
82
L
GLN
90
C
GLN
88
L
PHE
97
C
PHE
91
L
PHE
98
C
PHE
92
L
SER
116
C
SER
110
L
PHE
120
C
PHE
114
L
THR
131
C
THR
125
L
PHE
141
C
PHE
135
L
TYR
175
C
TYR
169
L
SER
184
C
SER
178
L
SER
161
C
SER
155
L
VAL
165
C
VAL
159
L
ALA
155
C
ALA
149
L
LEU
156
C
LEU
150
L
LYS
147
C
LYS
141
L
VAL
152
C
VAL
146
L
VAL
193
C
VAL
187
L
THR
199
C
THR
193
L
VAL
207
C
VAL
201
L
ASN
212
C
ASN
206
19
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