0.014586
0.000000
0.005668
0.000000
0.011915
0.000000
0.000000
0.000000
0.012324
0.000000
0.000000
0.000000
Ostrem, J.M.
Peters, U.
Sos, M.L.
Wells, J.A.
Shokat, K.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.000
0.0
111.240
0.001
90.000
0.0
68.561
0.001
83.931
0.001
87.056
0.001
140389
C16 H21 Cl2 N3 O3
374.262
1-(4-{[(4,5-dichloro-2-methoxyphenyl)amino]acetyl}piperazin-1-yl)propan-1-one
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H15 N5 O11 P2
443.201
n
GUANOSINE-5'-DIPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
C
N
3
N
C
N
4
N
C
N
5
N
O
N
6
N
C
N
7
N
C
N
8
N
N
Y
9
N
C
Y
10
N
C
Y
11
N
C
N
12
N
CL
Y
13
N
C
N
14
N
CL
Y
15
N
C
Y
16
N
C
N
17
N
O
N
18
N
C
N
19
N
N
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
O
N
24
N
C
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
N
N
47
S
C
N
48
N
C
N
49
N
O
N
50
N
C
N
51
N
O
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
N
N
60
S
C
N
61
N
C
N
62
N
O
N
63
N
C
N
64
N
C
N
65
N
C
N
66
N
N
N
67
N
C
N
68
N
N
N
69
N
N
N
70
N
O
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
N
N
87
S
C
N
88
N
C
N
89
N
O
N
90
N
C
N
91
N
C
N
92
N
O
N
93
N
N
N
94
N
O
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
N
N
104
S
C
N
105
N
C
N
106
N
O
N
107
N
C
N
108
N
C
N
109
N
O
N
110
N
O
N
111
N
O
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
N
N
120
R
C
N
121
N
C
N
122
N
O
N
123
N
C
N
124
N
S
N
125
N
O
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
P
N
134
N
O
N
135
N
O
N
136
N
O
N
137
N
O
N
138
N
P
N
139
N
O
N
140
N
O
N
141
N
O
N
142
N
C
N
143
R
C
N
144
N
O
N
145
S
C
N
146
N
O
N
147
R
C
N
148
N
O
N
149
R
C
Y
150
N
N
Y
151
N
C
Y
152
N
N
Y
153
N
C
N
154
N
C
N
155
N
O
N
156
N
N
N
157
N
C
N
158
N
N
N
159
N
N
Y
160
N
C
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
N
N
177
S
C
N
178
N
C
N
179
N
O
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
N
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
N
N
197
S
C
N
198
N
C
N
199
N
O
N
200
N
C
N
201
N
C
N
202
N
C
N
203
N
O
N
204
N
O
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
N
C
N
217
N
C
N
218
N
O
N
219
N
O
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
N
N
226
S
C
N
227
N
C
N
228
N
O
N
229
N
C
Y
230
N
C
Y
231
N
N
Y
232
N
C
Y
233
N
C
Y
234
N
N
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
N
N
250
S
C
N
251
N
C
N
252
N
O
N
253
S
C
N
254
N
C
N
255
N
C
N
256
N
C
N
257
N
O
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
N
N
272
S
C
N
273
N
C
N
274
N
O
N
275
N
C
N
276
N
C
N
277
N
C
N
278
N
C
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
N
N
294
S
C
N
295
N
C
N
296
N
O
N
297
N
C
N
298
N
C
N
299
N
C
N
300
N
C
N
301
N
N
N
302
N
O
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
N
323
N
C
N
324
N
S
N
325
N
C
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
N
N
339
S
C
N
340
N
C
N
341
N
O
N
342
N
C
Y
343
N
C
Y
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
N
C
N
366
N
C
N
367
N
C
N
368
N
O
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
N
N
379
S
C
N
380
N
C
N
381
N
O
N
382
N
C
N
383
N
O
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
R
C
N
397
N
O
N
398
N
C
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
N
N
410
S
C
N
411
N
C
N
412
N
O
N
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
N
420
N
O
N
421
N
O
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
N
N
434
S
C
N
435
N
C
N
436
N
O
N
437
N
C
N
438
N
C
N
439
N
C
N
440
N
O
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
1
N
sing
N
2
N
sing
Y
3
N
doub
Y
4
N
sing
Y
5
N
sing
N
6
N
sing
Y
7
N
doub
N
8
N
sing
Y
9
N
doub
N
10
N
sing
Y
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
doub
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
doub
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
doub
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
doub
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
doub
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
doub
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
doub
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
Y
158
N
sing
Y
159
N
sing
Y
160
N
doub
N
161
N
sing
Y
162
N
sing
N
163
N
sing
Y
164
N
doub
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
Y
231
N
sing
Y
232
N
doub
Y
233
N
doub
N
234
N
sing
Y
235
N
sing
N
236
N
sing
Y
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
Y
339
N
doub
Y
340
N
sing
Y
341
N
sing
N
342
N
sing
Y
343
N
doub
N
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
doub
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
Y
408
N
doub
Y
409
N
sing
Y
410
N
sing
N
411
N
sing
Y
412
N
doub
N
413
N
sing
Y
414
N
doub
N
415
N
sing
Y
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
doub
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
UK
Nature
NATUAS
0006
0028-0836
503
548
551
10.1038/nature12796
24256730
K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions.
2013
10.2210/pdb4m21/pdb
pdb_00004m21
100
1
CCD
2011-12-06
ADSC QUANTUM 315r
1.00 degrees, 3.0 sec, detector distance 200.00 mm
\w scans
Double crystal, Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.0700
1.0
0.064
140389
8.2.1
ALS
1.0700
SYNCHROTRON
ALS BEAMLINE 8.2.1
19352.785
K-Ras GTPase
UNP residues 1-169
3
man
polymer
443.201
GUANOSINE-5'-DIPHOSPHATE
3
syn
non-polymer
374.262
1-(4-{[(4,5-dichloro-2-methoxyphenyl)amino]acetyl}piperazin-1-yl)propan-1-one
1
syn
non-polymer
18.015
water
87
nat
water
K-Ras 2, Ki-Ras, c-K-ras, c-Ki-ras, GTPase KRas, N-terminally processed
no
no
GMTEYKLVVVGACGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETSLLDILDTAGQEEYSAMRDQYMRTGEGFL
LVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKSDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTL
VREIRKHKEK
GMTEYKLVVVGACGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETSLLDILDTAGQEEYSAMRDQYMRTGEGFL
LVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKSDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTL
VREIRKHKEK
A,B,C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
KRAS, KRAS isoform 2B, KRAS2, RASK2
9606
Homo sapiens
469008
Escherichia coli
BL21 (DE3)
plasmid
pJexpress411
1
2.01
38.82
VAPOR DIFFUSION, HANGING DROP
5.6
29% PEG4000, 0.2M NH4CH3COO, 0.1M Na-citrate, pH 5.6, vapor diffusion, hanging drop, temperature 293K
293
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-11-27
1
1
2013-12-18
1
2
2017-11-15
1
3
2023-09-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
related mutant of protein
protein bound to related compound
protein bound to related compound
protein bound to related compound
protein bound to related compound
mutant in related protein
mutant in related protein
wild-type protein
protein bound to related compound
protein bound to related compound
protein bound to related compound
protein bound to related compound
protein bound to related compound
protein bound to related compound
protein without small molecule bound
related compound bound to protein
RCSB
Y
RCSB
2013-08-05
REL
REL
GDP
GUANOSINE-5'-DIPHOSPHATE
21Y
1-(4-{[(4,5-dichloro-2-methoxyphenyl)amino]acetyl}piperazin-1-yl)propan-1-one
HOH
water
THE SEQUENCE IN THE STRUCTURE REPRESENTS ISOFORM 2B OF GTPASE KRAS. THIS ISOFORM DIFFERS FROM THE CANONICAL SEQUENCE AS FOLLOW: 151-153 (RVE TO GVD) AND 165-169 (QYRLK TO KHKEK)
3GFT
PDB ENTRY 3GFT
PDB
experimental model
GDP
220
2
GDP
GDP
201
A
LIG
210
3
21Y
21Y
201
B
GDP
220
2
GDP
GDP
202
B
GDP
220
2
GDP
GDP
201
C
HOH
2
4
HOH
HOH
301
A
HOH
4
4
HOH
HOH
302
A
HOH
5
4
HOH
HOH
303
A
HOH
9
4
HOH
HOH
304
A
HOH
10
4
HOH
HOH
305
A
HOH
11
4
HOH
HOH
306
A
HOH
12
4
HOH
HOH
307
A
HOH
13
4
HOH
HOH
308
A
HOH
14
4
HOH
HOH
309
A
HOH
17
4
HOH
HOH
310
A
HOH
18
4
HOH
HOH
311
A
HOH
19
4
HOH
HOH
312
A
HOH
24
4
HOH
HOH
313
A
HOH
25
4
HOH
HOH
314
A
HOH
27
4
HOH
HOH
315
A
HOH
29
4
HOH
HOH
316
A
HOH
31
4
HOH
HOH
317
A
HOH
32
4
HOH
HOH
318
A
HOH
36
4
HOH
HOH
319
A
HOH
37
4
HOH
HOH
320
A
HOH
38
4
HOH
HOH
321
A
HOH
39
4
HOH
HOH
322
A
HOH
40
4
HOH
HOH
323
A
HOH
42
4
HOH
HOH
324
A
HOH
43
4
HOH
HOH
325
A
HOH
47
4
HOH
HOH
326
A
HOH
49
4
HOH
HOH
327
A
HOH
51
4
HOH
HOH
328
A
HOH
57
4
HOH
HOH
329
A
HOH
58
4
HOH
HOH
330
A
HOH
59
4
HOH
HOH
331
A
HOH
61
4
HOH
HOH
332
A
HOH
63
4
HOH
HOH
333
A
HOH
65
4
HOH
HOH
334
A
HOH
67
4
HOH
HOH
335
A
HOH
68
4
HOH
HOH
336
A
HOH
72
4
HOH
HOH
337
A
HOH
73
4
HOH
HOH
338
A
HOH
74
4
HOH
HOH
339
A
HOH
76
4
HOH
HOH
340
A
HOH
81
4
HOH
HOH
341
A
HOH
82
4
HOH
HOH
342
A
HOH
85
4
HOH
HOH
343
A
HOH
86
4
HOH
HOH
344
A
HOH
87
4
HOH
HOH
345
A
HOH
1
4
HOH
HOH
301
B
HOH
8
4
HOH
HOH
302
B
HOH
15
4
HOH
HOH
303
B
HOH
16
4
HOH
HOH
304
B
HOH
20
4
HOH
HOH
305
B
HOH
21
4
HOH
HOH
306
B
HOH
23
4
HOH
HOH
307
B
HOH
26
4
HOH
HOH
308
B
HOH
28
4
HOH
HOH
309
B
HOH
34
4
HOH
HOH
310
B
HOH
35
4
HOH
HOH
311
B
HOH
41
4
HOH
HOH
312
B
HOH
45
4
HOH
HOH
313
B
HOH
46
4
HOH
HOH
314
B
HOH
50
4
HOH
HOH
315
B
HOH
52
4
HOH
HOH
316
B
HOH
53
4
HOH
HOH
317
B
HOH
56
4
HOH
HOH
318
B
HOH
62
4
HOH
HOH
319
B
HOH
66
4
HOH
HOH
320
B
HOH
71
4
HOH
HOH
321
B
HOH
75
4
HOH
HOH
322
B
HOH
79
4
HOH
HOH
323
B
HOH
80
4
HOH
HOH
324
B
HOH
83
4
HOH
HOH
325
B
HOH
84
4
HOH
HOH
326
B
HOH
3
4
HOH
HOH
301
C
HOH
6
4
HOH
HOH
302
C
HOH
7
4
HOH
HOH
303
C
HOH
22
4
HOH
HOH
304
C
HOH
30
4
HOH
HOH
305
C
HOH
33
4
HOH
HOH
306
C
HOH
44
4
HOH
HOH
307
C
HOH
48
4
HOH
HOH
308
C
HOH
54
4
HOH
HOH
309
C
HOH
55
4
HOH
HOH
310
C
HOH
60
4
HOH
HOH
311
C
HOH
64
4
HOH
HOH
312
C
HOH
69
4
HOH
HOH
313
C
HOH
70
4
HOH
HOH
314
C
HOH
77
4
HOH
HOH
315
C
HOH
78
4
HOH
HOH
316
C
2.500
2.500
23.480
23.480
n
1
0
A
MET
1
n
2
MET
1
A
THR
2
n
3
THR
2
A
GLU
3
n
4
GLU
3
A
TYR
4
n
5
TYR
4
A
LYS
5
n
6
LYS
5
A
LEU
6
n
7
LEU
6
A
VAL
7
n
8
VAL
7
A
VAL
8
n
9
VAL
8
A
VAL
9
n
10
VAL
9
A
GLY
10
n
11
GLY
10
A
ALA
11
n
12
ALA
11
A
CYS
12
n
13
CYS
12
A
GLY
13
n
14
GLY
13
A
VAL
14
n
15
VAL
14
A
GLY
15
n
16
GLY
15
A
LYS
16
n
17
LYS
16
A
SER
17
n
18
SER
17
A
ALA
18
n
19
ALA
18
A
LEU
19
n
20
LEU
19
A
THR
20
n
21
THR
20
A
ILE
21
n
22
ILE
21
A
GLN
22
n
23
GLN
22
A
LEU
23
n
24
LEU
23
A
ILE
24
n
25
ILE
24
A
GLN
25
n
26
GLN
25
A
ASN
26
n
27
ASN
26
A
HIS
27
n
28
HIS
27
A
PHE
28
n
29
PHE
28
A
VAL
29
n
30
VAL
29
A
ASP
30
n
31
ASP
30
A
n
32
31
A
n
33
32
A
n
34
33
A
n
35
34
A
n
36
35
A
ILE
36
n
37
ILE
36
A
GLU
37
n
38
GLU
37
A
ASP
38
n
39
ASP
38
A
SER
39
n
40
SER
39
A
TYR
40
n
41
TYR
40
A
ARG
41
n
42
ARG
41
A
LYS
42
n
43
LYS
42
A
GLN
43
n
44
GLN
43
A
VAL
44
n
45
VAL
44
A
VAL
45
n
46
VAL
45
A
ILE
46
n
47
ILE
46
A
ASP
47
n
48
ASP
47
A
GLY
48
n
49
GLY
48
A
GLU
49
n
50
GLU
49
A
THR
50
n
51
THR
50
A
SER
51
n
52
SER
51
A
LEU
52
n
53
LEU
52
A
LEU
53
n
54
LEU
53
A
ASP
54
n
55
ASP
54
A
ILE
55
n
56
ILE
55
A
LEU
56
n
57
LEU
56
A
ASP
57
n
58
ASP
57
A
THR
58
n
59
THR
58
A
ALA
59
n
60
ALA
59
A
GLY
60
n
61
GLY
60
A
GLN
61
n
62
GLN
61
A
n
63
62
A
n
64
63
A
n
65
64
A
SER
65
n
66
SER
65
A
ALA
66
n
67
ALA
66
A
MET
67
n
68
MET
67
A
ARG
68
n
69
ARG
68
A
ASP
69
n
70
ASP
69
A
GLN
70
n
71
GLN
70
A
TYR
71
n
72
TYR
71
A
MET
72
n
73
MET
72
A
ARG
73
n
74
ARG
73
A
THR
74
n
75
THR
74
A
GLY
75
n
76
GLY
75
A
GLU
76
n
77
GLU
76
A
GLY
77
n
78
GLY
77
A
PHE
78
n
79
PHE
78
A
LEU
79
n
80
LEU
79
A
LEU
80
n
81
LEU
80
A
VAL
81
n
82
VAL
81
A
PHE
82
n
83
PHE
82
A
ALA
83
n
84
ALA
83
A
ILE
84
n
85
ILE
84
A
ASN
85
n
86
ASN
85
A
ASN
86
n
87
ASN
86
A
THR
87
n
88
THR
87
A
LYS
88
n
89
LYS
88
A
SER
89
n
90
SER
89
A
PHE
90
n
91
PHE
90
A
GLU
91
n
92
GLU
91
A
ASP
92
n
93
ASP
92
A
ILE
93
n
94
ILE
93
A
HIS
94
n
95
HIS
94
A
HIS
95
n
96
HIS
95
A
TYR
96
n
97
TYR
96
A
ARG
97
n
98
ARG
97
A
GLU
98
n
99
GLU
98
A
GLN
99
n
100
GLN
99
A
ILE
100
n
101
ILE
100
A
LYS
101
n
102
LYS
101
A
ARG
102
n
103
ARG
102
A
VAL
103
n
104
VAL
103
A
LYS
104
n
105
LYS
104
A
ASP
105
n
106
ASP
105
A
SER
106
n
107
SER
106
A
GLU
107
n
108
GLU
107
A
ASP
108
n
109
ASP
108
A
VAL
109
n
110
VAL
109
A
PRO
110
n
111
PRO
110
A
MET
111
n
112
MET
111
A
VAL
112
n
113
VAL
112
A
LEU
113
n
114
LEU
113
A
VAL
114
n
115
VAL
114
A
GLY
115
n
116
GLY
115
A
ASN
116
n
117
ASN
116
A
LYS
117
n
118
LYS
117
A
SER
118
n
119
SER
118
A
ASP
119
n
120
ASP
119
A
LEU
120
n
121
LEU
120
A
PRO
121
n
122
PRO
121
A
SER
122
n
123
SER
122
A
ARG
123
n
124
ARG
123
A
THR
124
n
125
THR
124
A
VAL
125
n
126
VAL
125
A
ASP
126
n
127
ASP
126
A
THR
127
n
128
THR
127
A
LYS
128
n
129
LYS
128
A
GLN
129
n
130
GLN
129
A
ALA
130
n
131
ALA
130
A
GLN
131
n
132
GLN
131
A
ASP
132
n
133
ASP
132
A
LEU
133
n
134
LEU
133
A
ALA
134
n
135
ALA
134
A
ARG
135
n
136
ARG
135
A
SER
136
n
137
SER
136
A
TYR
137
n
138
TYR
137
A
GLY
138
n
139
GLY
138
A
ILE
139
n
140
ILE
139
A
PRO
140
n
141
PRO
140
A
PHE
141
n
142
PHE
141
A
ILE
142
n
143
ILE
142
A
GLU
143
n
144
GLU
143
A
THR
144
n
145
THR
144
A
SER
145
n
146
SER
145
A
ALA
146
n
147
ALA
146
A
LYS
147
n
148
LYS
147
A
THR
148
n
149
THR
148
A
ARG
149
n
150
ARG
149
A
GLN
150
n
151
GLN
150
A
GLY
151
n
152
GLY
151
A
VAL
152
n
153
VAL
152
A
ASP
153
n
154
ASP
153
A
ASP
154
n
155
ASP
154
A
ALA
155
n
156
ALA
155
A
PHE
156
n
157
PHE
156
A
TYR
157
n
158
TYR
157
A
THR
158
n
159
THR
158
A
LEU
159
n
160
LEU
159
A
VAL
160
n
161
VAL
160
A
ARG
161
n
162
ARG
161
A
GLU
162
n
163
GLU
162
A
ILE
163
n
164
ILE
163
A
ARG
164
n
165
ARG
164
A
LYS
165
n
166
LYS
165
A
HIS
166
n
167
HIS
166
A
LYS
167
n
168
LYS
167
A
n
169
168
A
n
170
169
A
n
1
0
B
MET
1
n
2
MET
1
B
THR
2
n
3
THR
2
B
GLU
3
n
4
GLU
3
B
TYR
4
n
5
TYR
4
B
LYS
5
n
6
LYS
5
B
LEU
6
n
7
LEU
6
B
VAL
7
n
8
VAL
7
B
VAL
8
n
9
VAL
8
B
VAL
9
n
10
VAL
9
B
GLY
10
n
11
GLY
10
B
ALA
11
n
12
ALA
11
B
CYS
12
n
13
CYS
12
B
GLY
13
n
14
GLY
13
B
VAL
14
n
15
VAL
14
B
GLY
15
n
16
GLY
15
B
LYS
16
n
17
LYS
16
B
SER
17
n
18
SER
17
B
ALA
18
n
19
ALA
18
B
LEU
19
n
20
LEU
19
B
THR
20
n
21
THR
20
B
ILE
21
n
22
ILE
21
B
GLN
22
n
23
GLN
22
B
LEU
23
n
24
LEU
23
B
ILE
24
n
25
ILE
24
B
GLN
25
n
26
GLN
25
B
ASN
26
n
27
ASN
26
B
HIS
27
n
28
HIS
27
B
PHE
28
n
29
PHE
28
B
VAL
29
n
30
VAL
29
B
n
31
30
B
n
32
31
B
n
33
32
B
n
34
33
B
n
35
34
B
n
36
35
B
n
37
36
B
n
38
37
B
ASP
38
n
39
ASP
38
B
SER
39
n
40
SER
39
B
TYR
40
n
41
TYR
40
B
ARG
41
n
42
ARG
41
B
LYS
42
n
43
LYS
42
B
GLN
43
n
44
GLN
43
B
VAL
44
n
45
VAL
44
B
VAL
45
n
46
VAL
45
B
ILE
46
n
47
ILE
46
B
ASP
47
n
48
ASP
47
B
GLY
48
n
49
GLY
48
B
GLU
49
n
50
GLU
49
B
THR
50
n
51
THR
50
B
SER
51
n
52
SER
51
B
LEU
52
n
53
LEU
52
B
LEU
53
n
54
LEU
53
B
ASP
54
n
55
ASP
54
B
ILE
55
n
56
ILE
55
B
LEU
56
n
57
LEU
56
B
ASP
57
n
58
ASP
57
B
THR
58
n
59
THR
58
B
ALA
59
n
60
ALA
59
B
n
61
60
B
n
62
61
B
n
63
62
B
n
64
63
B
TYR
64
n
65
TYR
64
B
SER
65
n
66
SER
65
B
ALA
66
n
67
ALA
66
B
MET
67
n
68
MET
67
B
ARG
68
n
69
ARG
68
B
ASP
69
n
70
ASP
69
B
GLN
70
n
71
GLN
70
B
TYR
71
n
72
TYR
71
B
MET
72
n
73
MET
72
B
ARG
73
n
74
ARG
73
B
THR
74
n
75
THR
74
B
GLY
75
n
76
GLY
75
B
GLU
76
n
77
GLU
76
B
GLY
77
n
78
GLY
77
B
PHE
78
n
79
PHE
78
B
LEU
79
n
80
LEU
79
B
LEU
80
n
81
LEU
80
B
VAL
81
n
82
VAL
81
B
PHE
82
n
83
PHE
82
B
ALA
83
n
84
ALA
83
B
ILE
84
n
85
ILE
84
B
ASN
85
n
86
ASN
85
B
ASN
86
n
87
ASN
86
B
THR
87
n
88
THR
87
B
LYS
88
n
89
LYS
88
B
SER
89
n
90
SER
89
B
PHE
90
n
91
PHE
90
B
GLU
91
n
92
GLU
91
B
ASP
92
n
93
ASP
92
B
ILE
93
n
94
ILE
93
B
HIS
94
n
95
HIS
94
B
HIS
95
n
96
HIS
95
B
TYR
96
n
97
TYR
96
B
ARG
97
n
98
ARG
97
B
GLU
98
n
99
GLU
98
B
GLN
99
n
100
GLN
99
B
ILE
100
n
101
ILE
100
B
LYS
101
n
102
LYS
101
B
ARG
102
n
103
ARG
102
B
VAL
103
n
104
VAL
103
B
LYS
104
n
105
LYS
104
B
ASP
105
n
106
ASP
105
B
SER
106
n
107
SER
106
B
GLU
107
n
108
GLU
107
B
ASP
108
n
109
ASP
108
B
VAL
109
n
110
VAL
109
B
PRO
110
n
111
PRO
110
B
MET
111
n
112
MET
111
B
VAL
112
n
113
VAL
112
B
LEU
113
n
114
LEU
113
B
VAL
114
n
115
VAL
114
B
GLY
115
n
116
GLY
115
B
ASN
116
n
117
ASN
116
B
LYS
117
n
118
LYS
117
B
SER
118
n
119
SER
118
B
ASP
119
n
120
ASP
119
B
LEU
120
n
121
LEU
120
B
PRO
121
n
122
PRO
121
B
SER
122
n
123
SER
122
B
ARG
123
n
124
ARG
123
B
THR
124
n
125
THR
124
B
VAL
125
n
126
VAL
125
B
ASP
126
n
127
ASP
126
B
THR
127
n
128
THR
127
B
LYS
128
n
129
LYS
128
B
GLN
129
n
130
GLN
129
B
ALA
130
n
131
ALA
130
B
GLN
131
n
132
GLN
131
B
ASP
132
n
133
ASP
132
B
LEU
133
n
134
LEU
133
B
ALA
134
n
135
ALA
134
B
ARG
135
n
136
ARG
135
B
SER
136
n
137
SER
136
B
TYR
137
n
138
TYR
137
B
GLY
138
n
139
GLY
138
B
ILE
139
n
140
ILE
139
B
PRO
140
n
141
PRO
140
B
PHE
141
n
142
PHE
141
B
ILE
142
n
143
ILE
142
B
GLU
143
n
144
GLU
143
B
THR
144
n
145
THR
144
B
SER
145
n
146
SER
145
B
ALA
146
n
147
ALA
146
B
LYS
147
n
148
LYS
147
B
THR
148
n
149
THR
148
B
ARG
149
n
150
ARG
149
B
GLN
150
n
151
GLN
150
B
GLY
151
n
152
GLY
151
B
VAL
152
n
153
VAL
152
B
ASP
153
n
154
ASP
153
B
ASP
154
n
155
ASP
154
B
ALA
155
n
156
ALA
155
B
PHE
156
n
157
PHE
156
B
TYR
157
n
158
TYR
157
B
THR
158
n
159
THR
158
B
LEU
159
n
160
LEU
159
B
VAL
160
n
161
VAL
160
B
ARG
161
n
162
ARG
161
B
GLU
162
n
163
GLU
162
B
ILE
163
n
164
ILE
163
B
ARG
164
n
165
ARG
164
B
LYS
165
n
166
LYS
165
B
HIS
166
n
167
HIS
166
B
LYS
167
n
168
LYS
167
B
GLU
168
n
169
GLU
168
B
n
170
169
B
n
1
0
C
n
2
1
C
THR
2
n
3
THR
2
C
GLU
3
n
4
GLU
3
C
TYR
4
n
5
TYR
4
C
LYS
5
n
6
LYS
5
C
LEU
6
n
7
LEU
6
C
VAL
7
n
8
VAL
7
C
VAL
8
n
9
VAL
8
C
VAL
9
n
10
VAL
9
C
GLY
10
n
11
GLY
10
C
ALA
11
n
12
ALA
11
C
CYS
12
n
13
CYS
12
C
GLY
13
n
14
GLY
13
C
VAL
14
n
15
VAL
14
C
GLY
15
n
16
GLY
15
C
LYS
16
n
17
LYS
16
C
SER
17
n
18
SER
17
C
ALA
18
n
19
ALA
18
C
LEU
19
n
20
LEU
19
C
THR
20
n
21
THR
20
C
ILE
21
n
22
ILE
21
C
GLN
22
n
23
GLN
22
C
LEU
23
n
24
LEU
23
C
ILE
24
n
25
ILE
24
C
GLN
25
n
26
GLN
25
C
ASN
26
n
27
ASN
26
C
HIS
27
n
28
HIS
27
C
PHE
28
n
29
PHE
28
C
n
30
29
C
n
31
30
C
n
32
31
C
n
33
32
C
n
34
33
C
n
35
34
C
n
36
35
C
n
37
36
C
n
38
37
C
n
39
38
C
n
40
39
C
TYR
40
n
41
TYR
40
C
ARG
41
n
42
ARG
41
C
LYS
42
n
43
LYS
42
C
GLN
43
n
44
GLN
43
C
VAL
44
n
45
VAL
44
C
VAL
45
n
46
VAL
45
C
ILE
46
n
47
ILE
46
C
ASP
47
n
48
ASP
47
C
GLY
48
n
49
GLY
48
C
GLU
49
n
50
GLU
49
C
THR
50
n
51
THR
50
C
SER
51
n
52
SER
51
C
LEU
52
n
53
LEU
52
C
LEU
53
n
54
LEU
53
C
ASP
54
n
55
ASP
54
C
ILE
55
n
56
ILE
55
C
LEU
56
n
57
LEU
56
C
ASP
57
n
58
ASP
57
C
THR
58
n
59
THR
58
C
ALA
59
n
60
ALA
59
C
n
61
60
C
n
62
61
C
n
63
62
C
n
64
63
C
n
65
64
C
n
66
65
C
n
67
66
C
n
68
67
C
n
69
68
C
ASP
69
n
70
ASP
69
C
GLN
70
n
71
GLN
70
C
TYR
71
n
72
TYR
71
C
MET
72
n
73
MET
72
C
ARG
73
n
74
ARG
73
C
THR
74
n
75
THR
74
C
GLY
75
n
76
GLY
75
C
GLU
76
n
77
GLU
76
C
GLY
77
n
78
GLY
77
C
PHE
78
n
79
PHE
78
C
LEU
79
n
80
LEU
79
C
LEU
80
n
81
LEU
80
C
VAL
81
n
82
VAL
81
C
PHE
82
n
83
PHE
82
C
ALA
83
n
84
ALA
83
C
ILE
84
n
85
ILE
84
C
ASN
85
n
86
ASN
85
C
ASN
86
n
87
ASN
86
C
THR
87
n
88
THR
87
C
LYS
88
n
89
LYS
88
C
SER
89
n
90
SER
89
C
PHE
90
n
91
PHE
90
C
GLU
91
n
92
GLU
91
C
ASP
92
n
93
ASP
92
C
ILE
93
n
94
ILE
93
C
HIS
94
n
95
HIS
94
C
HIS
95
n
96
HIS
95
C
TYR
96
n
97
TYR
96
C
ARG
97
n
98
ARG
97
C
GLU
98
n
99
GLU
98
C
GLN
99
n
100
GLN
99
C
ILE
100
n
101
ILE
100
C
LYS
101
n
102
LYS
101
C
ARG
102
n
103
ARG
102
C
VAL
103
n
104
VAL
103
C
LYS
104
n
105
LYS
104
C
ASP
105
n
106
ASP
105
C
SER
106
n
107
SER
106
C
GLU
107
n
108
GLU
107
C
ASP
108
n
109
ASP
108
C
VAL
109
n
110
VAL
109
C
PRO
110
n
111
PRO
110
C
MET
111
n
112
MET
111
C
VAL
112
n
113
VAL
112
C
LEU
113
n
114
LEU
113
C
VAL
114
n
115
VAL
114
C
GLY
115
n
116
GLY
115
C
ASN
116
n
117
ASN
116
C
LYS
117
n
118
LYS
117
C
SER
118
n
119
SER
118
C
ASP
119
n
120
ASP
119
C
LEU
120
n
121
LEU
120
C
PRO
121
n
122
PRO
121
C
SER
122
n
123
SER
122
C
ARG
123
n
124
ARG
123
C
THR
124
n
125
THR
124
C
VAL
125
n
126
VAL
125
C
ASP
126
n
127
ASP
126
C
THR
127
n
128
THR
127
C
LYS
128
n
129
LYS
128
C
GLN
129
n
130
GLN
129
C
ALA
130
n
131
ALA
130
C
GLN
131
n
132
GLN
131
C
ASP
132
n
133
ASP
132
C
LEU
133
n
134
LEU
133
C
ALA
134
n
135
ALA
134
C
ARG
135
n
136
ARG
135
C
SER
136
n
137
SER
136
C
TYR
137
n
138
TYR
137
C
GLY
138
n
139
GLY
138
C
ILE
139
n
140
ILE
139
C
PRO
140
n
141
PRO
140
C
PHE
141
n
142
PHE
141
C
ILE
142
n
143
ILE
142
C
GLU
143
n
144
GLU
143
C
THR
144
n
145
THR
144
C
SER
145
n
146
SER
145
C
ALA
146
n
147
ALA
146
C
LYS
147
n
148
LYS
147
C
THR
148
n
149
THR
148
C
ARG
149
n
150
ARG
149
C
GLN
150
n
151
GLN
150
C
GLY
151
n
152
GLY
151
C
VAL
152
n
153
VAL
152
C
ASP
153
n
154
ASP
153
C
ASP
154
n
155
ASP
154
C
ALA
155
n
156
ALA
155
C
PHE
156
n
157
PHE
156
C
TYR
157
n
158
TYR
157
C
THR
158
n
159
THR
158
C
LEU
159
n
160
LEU
159
C
VAL
160
n
161
VAL
160
C
ARG
161
n
162
ARG
161
C
GLU
162
n
163
GLU
162
C
ILE
163
n
164
ILE
163
C
ARG
164
n
165
ARG
164
C
LYS
165
n
166
LYS
165
C
HIS
166
n
167
HIS
166
C
LYS
167
n
168
LYS
167
C
n
169
168
C
n
170
169
C
5.5702
-0.5383
2.0505
1.3070
-3.0316
7.3195
0.4403
0.4108
-0.1735
-0.7672
-0.5239
-0.7470
0.7902
0.8175
0.2254
0.2589
0.1029
0.0350
0.4210
-0.0140
0.2268
refined
64.2170
14.2241
66.2551
X-RAY DIFFRACTION
5.1920
0.9904
-2.5520
7.4590
0.5137
5.9540
-0.1559
0.3012
0.1148
0.3862
-0.2215
-1.6300
-0.3034
1.7223
-0.0599
0.2320
0.0005
-0.0246
0.5770
0.0934
0.4580
refined
70.6305
23.1417
71.6387
X-RAY DIFFRACTION
3.2234
0.7727
0.0547
8.0867
-0.9072
6.8009
0.3683
0.6674
0.0866
0.1716
-0.2861
-0.9251
0.1832
0.8527
-0.0467
0.3949
0.1859
0.0112
0.5578
0.0309
0.3661
refined
68.9268
10.4632
72.0153
X-RAY DIFFRACTION
4.0200
-3.4127
1.2962
6.7838
1.4688
2.0324
0.0660
0.7473
0.6942
-0.5746
1.0256
-2.3552
-0.8519
1.6060
-1.0394
1.0781
-0.0591
0.2780
0.7594
-0.2293
0.6260
refined
65.1426
12.0696
54.8187
X-RAY DIFFRACTION
3.5637
-2.0368
1.8562
7.4446
-0.4409
5.4906
0.1588
0.3250
-0.1379
-0.5789
-0.2667
0.7657
0.1580
0.1855
0.2277
0.2068
0.0137
0.0008
0.2313
-0.0317
0.2913
refined
54.2334
21.1566
63.6880
X-RAY DIFFRACTION
5.9139
1.0791
2.0834
5.9484
0.6489
3.3264
0.2023
-0.7349
0.0809
0.5156
-0.3118
0.8902
0.2938
-0.5748
0.0537
0.2720
-0.0171
0.0531
0.3039
-0.0083
0.3761
refined
51.5200
22.3943
72.4765
X-RAY DIFFRACTION
6.5042
4.4598
4.0943
5.7719
5.0764
5.9638
0.3288
0.0783
-0.1119
1.1039
-0.1574
0.9499
1.3813
0.2196
-0.2010
0.5417
0.0285
0.0529
0.3340
-0.0028
0.3505
refined
58.3038
9.6880
74.0407
X-RAY DIFFRACTION
3.8597
-1.6895
0.1225
4.6765
-1.9112
3.5213
-0.1743
-0.4091
1.3290
0.3935
0.1494
0.3682
-1.6390
0.1376
-0.1092
0.6943
-0.0201
0.0222
0.3497
-0.1027
0.6539
refined
51.8008
20.8915
99.7904
X-RAY DIFFRACTION
5.2448
-1.5769
1.1764
4.7973
-0.6967
4.0283
0.0731
-0.1227
0.0555
-0.2310
0.0864
0.9734
-0.2786
-0.5132
-0.1516
0.2581
0.0280
-0.0158
0.3388
0.0358
0.4828
refined
45.4122
9.4228
95.7735
X-RAY DIFFRACTION
3.6905
-0.1638
1.0961
5.2507
-0.9092
6.4549
-0.1113
0.2000
0.4842
-0.2323
0.0177
-0.4112
-0.5483
0.6764
0.1112
0.3166
-0.0607
0.0309
0.3580
0.0564
0.3294
refined
57.5684
11.0746
92.0095
X-RAY DIFFRACTION
1.6597
-1.1601
2.0311
2.5275
-0.0198
3.4092
0.7816
-1.3366
-1.0246
2.5136
-0.4567
-0.3763
1.1080
-0.8175
-0.0682
1.0795
-0.0735
-0.2562
0.6919
0.4070
0.4623
refined
38.9981
28.8021
125.4068
X-RAY DIFFRACTION
2.2201
-4.1436
0.6016
9.8748
-1.9939
0.4872
-0.3794
-1.2809
-0.2188
0.5556
0.2529
1.6288
-0.2270
-0.1628
0.5635
1.5664
0.3744
-0.5168
1.3205
-0.4909
0.6360
refined
33.7537
42.2658
128.5213
X-RAY DIFFRACTION
8.1864
1.2158
2.8615
7.5877
2.4062
8.7878
-0.2472
-0.6979
0.5049
0.5877
0.0662
0.3895
-0.8913
-0.4626
0.2306
0.4170
0.0397
0.0440
0.3219
0.0240
0.2302
refined
34.1515
40.2766
114.8209
X-RAY DIFFRACTION
6.3353
-1.1280
2.3384
5.4934
0.7481
6.3235
0.1336
0.5214
-0.9873
-0.3995
0.0468
-0.8203
0.5053
0.4620
-0.0827
0.2513
0.0111
-0.0306
0.3205
0.0255
0.3328
refined
38.5567
31.3307
107.6426
X-RAY DIFFRACTION
4.3263
1.2811
-0.8744
2.6271
2.7442
4.1229
-0.7113
-0.4976
-0.3536
2.0836
0.7002
-1.6068
-0.1336
1.2619
-0.3849
0.9530
0.0176
-0.4921
0.6030
0.0837
0.6502
refined
47.4475
34.9535
121.5860
X-RAY DIFFRACTION
A
0
A
0
X-RAY DIFFRACTION
1
chain 'A' and (resid 1 through 15 )
A
0
A
0
X-RAY DIFFRACTION
2
chain 'A' and (resid 16 through 38 )
A
0
A
0
X-RAY DIFFRACTION
3
chain 'A' and (resid 39 through 58 )
A
0
A
0
X-RAY DIFFRACTION
4
chain 'A' and (resid 59 through 74 )
A
0
A
0
X-RAY DIFFRACTION
5
chain 'A' and (resid 75 through 126 )
A
0
A
0
X-RAY DIFFRACTION
6
chain 'A' and (resid 127 through 151 )
A
0
A
0
X-RAY DIFFRACTION
7
chain 'A' and (resid 152 through 167 )
B
0
B
0
X-RAY DIFFRACTION
8
chain 'B' and (resid 1 through 48 )
B
0
B
0
X-RAY DIFFRACTION
9
chain 'B' and (resid 49 through 116 )
B
0
B
0
X-RAY DIFFRACTION
10
chain 'B' and (resid 117 through 168 )
C
0
C
0
X-RAY DIFFRACTION
11
chain 'C' and (resid 2 through 57 )
C
0
C
0
X-RAY DIFFRACTION
12
chain 'C' and (resid 58 through 76 )
C
0
C
0
X-RAY DIFFRACTION
13
chain 'C' and (resid 77 through 116 )
C
0
C
0
X-RAY DIFFRACTION
14
chain 'C' and (resid 117 through 151 )
C
0
C
0
X-RAY DIFFRACTION
15
chain 'C' and (resid 152 through 167 )
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
44
A
N
VAL
45
A
O
SER
51
A
O
SER
52
A
O
LEU
56
A
O
LEU
57
A
N
VAL
8
A
N
VAL
9
A
N
VAL
9
A
N
VAL
10
A
O
VAL
81
A
O
VAL
82
A
N
PHE
82
A
N
PHE
83
A
O
ASN
116
A
O
ASN
117
A
N
LEU
113
A
N
LEU
114
A
O
ILE
142
A
O
ILE
143
B
N
VAL
44
B
N
VAL
45
B
O
SER
51
B
O
SER
52
B
O
ASP
54
B
O
ASP
55
B
N
TYR
4
B
N
TYR
5
B
N
VAL
9
B
N
VAL
10
B
O
VAL
81
B
O
VAL
82
B
N
LEU
80
B
N
LEU
81
B
O
VAL
112
B
O
VAL
113
B
N
LEU
113
B
N
LEU
114
B
O
ILE
142
B
O
ILE
143
C
N
VAL
44
C
N
VAL
45
C
O
SER
51
C
O
SER
52
C
O
LEU
52
C
O
LEU
53
C
N
TYR
4
C
N
TYR
5
C
N
VAL
9
C
N
VAL
10
C
O
VAL
81
C
O
VAL
82
C
N
PHE
82
C
N
PHE
83
C
O
ASN
116
C
O
ASN
117
C
N
LEU
113
C
N
LEU
114
C
O
ILE
142
C
O
ILE
143
1
A
CG
GLU
3
A
CG
GLU
4
1
Y
1
A
CD
GLU
3
A
CD
GLU
4
1
Y
1
A
OE1
GLU
3
A
OE1
GLU
4
1
Y
1
A
OE2
GLU
3
A
OE2
GLU
4
1
Y
1
A
CG1
VAL
29
A
CG1
VAL
30
1
Y
1
A
CG2
VAL
29
A
CG2
VAL
30
1
Y
1
A
CG
ASP
30
A
CG
ASP
31
1
Y
1
A
OD1
ASP
30
A
OD1
ASP
31
1
Y
1
A
OD2
ASP
30
A
OD2
ASP
31
1
Y
1
A
CG1
ILE
36
A
CG1
ILE
37
1
Y
1
A
CG2
ILE
36
A
CG2
ILE
37
1
Y
1
A
CD1
ILE
36
A
CD1
ILE
37
1
Y
1
A
CG
ASP
38
A
CG
ASP
39
1
Y
1
A
OD1
ASP
38
A
OD1
ASP
39
1
Y
1
A
OD2
ASP
38
A
OD2
ASP
39
1
Y
1
A
CG
GLN
61
A
CG
GLN
62
1
Y
1
A
CD
GLN
61
A
CD
GLN
62
1
Y
1
A
OE1
GLN
61
A
OE1
GLN
62
1
Y
1
A
NE2
GLN
61
A
NE2
GLN
62
1
Y
1
A
OG
SER
65
A
OG
SER
66
1
Y
1
A
CG
MET
67
A
CG
MET
68
1
Y
1
A
SD
MET
67
A
SD
MET
68
1
Y
1
A
CE
MET
67
A
CE
MET
68
1
Y
1
A
CG
ARG
68
A
CG
ARG
69
1
Y
1
A
CD
ARG
68
A
CD
ARG
69
1
Y
1
A
NE
ARG
68
A
NE
ARG
69
1
Y
1
A
CZ
ARG
68
A
CZ
ARG
69
1
Y
1
A
NH1
ARG
68
A
NH1
ARG
69
1
Y
1
A
NH2
ARG
68
A
NH2
ARG
69
1
Y
1
A
CG
ASP
105
A
CG
ASP
106
1
Y
1
A
OD1
ASP
105
A
OD1
ASP
106
1
Y
1
A
OD2
ASP
105
A
OD2
ASP
106
1
Y
1
A
CG
GLU
107
A
CG
GLU
108
1
Y
1
A
CD
GLU
107
A
CD
GLU
108
1
Y
1
A
OE1
GLU
107
A
OE1
GLU
108
1
Y
1
A
OE2
GLU
107
A
OE2
GLU
108
1
Y
1
B
CG
GLU
3
B
CG
GLU
4
1
Y
1
B
CD
GLU
3
B
CD
GLU
4
1
Y
1
B
OE1
GLU
3
B
OE1
GLU
4
1
Y
1
B
OE2
GLU
3
B
OE2
GLU
4
1
Y
1
B
CG1
VAL
29
B
CG1
VAL
30
1
Y
1
B
CG2
VAL
29
B
CG2
VAL
30
1
Y
1
B
CG
ASP
38
B
CG
ASP
39
1
Y
1
B
OD1
ASP
38
B
OD1
ASP
39
1
Y
1
B
OD2
ASP
38
B
OD2
ASP
39
1
Y
1
B
OG
SER
39
B
OG
SER
40
1
Y
1
B
CG
ARG
41
B
CG
ARG
42
1
Y
1
B
CD
ARG
41
B
CD
ARG
42
1
Y
1
B
NE
ARG
41
B
NE
ARG
42
1
Y
1
B
CZ
ARG
41
B
CZ
ARG
42
1
Y
1
B
NH1
ARG
41
B
NH1
ARG
42
1
Y
1
B
NH2
ARG
41
B
NH2
ARG
42
1
Y
1
B
OG
SER
51
B
OG
SER
52
1
Y
1
B
CG
LEU
52
B
CG
LEU
53
1
Y
1
B
CD1
LEU
52
B
CD1
LEU
53
1
Y
1
B
CD2
LEU
52
B
CD2
LEU
53
1
Y
1
B
CG
TYR
64
B
CG
TYR
65
1
Y
1
B
CD1
TYR
64
B
CD1
TYR
65
1
Y
1
B
CD2
TYR
64
B
CD2
TYR
65
1
Y
1
B
CE1
TYR
64
B
CE1
TYR
65
1
Y
1
B
CE2
TYR
64
B
CE2
TYR
65
1
Y
1
B
CZ
TYR
64
B
CZ
TYR
65
1
Y
1
B
OH
TYR
64
B
OH
TYR
65
1
Y
1
B
OG
SER
65
B
OG
SER
66
1
Y
1
B
CG
ARG
68
B
CG
ARG
69
1
Y
1
B
CD
ARG
68
B
CD
ARG
69
1
Y
1
B
NE
ARG
68
B
NE
ARG
69
1
Y
1
B
CZ
ARG
68
B
CZ
ARG
69
1
Y
1
B
NH1
ARG
68
B
NH1
ARG
69
1
Y
1
B
NH2
ARG
68
B
NH2
ARG
69
1
Y
1
B
CG
GLU
107
B
CG
GLU
108
1
Y
1
B
CD
GLU
107
B
CD
GLU
108
1
Y
1
B
OE1
GLU
107
B
OE1
GLU
108
1
Y
1
B
OE2
GLU
107
B
OE2
GLU
108
1
Y
1
B
CG
GLU
168
B
CG
GLU
169
1
Y
1
B
CD
GLU
168
B
CD
GLU
169
1
Y
1
B
OE1
GLU
168
B
OE1
GLU
169
1
Y
1
B
OE2
GLU
168
B
OE2
GLU
169
1
Y
1
C
CG
GLU
3
C
CG
GLU
4
1
Y
1
C
CD
GLU
3
C
CD
GLU
4
1
Y
1
C
OE1
GLU
3
C
OE1
GLU
4
1
Y
1
C
OE2
GLU
3
C
OE2
GLU
4
1
Y
1
C
CG
ASN
26
C
CG
ASN
27
1
Y
1
C
OD1
ASN
26
C
OD1
ASN
27
1
Y
1
C
ND2
ASN
26
C
ND2
ASN
27
1
Y
1
C
CG
ARG
41
C
CG
ARG
42
1
Y
1
C
CD
ARG
41
C
CD
ARG
42
1
Y
1
C
NE
ARG
41
C
NE
ARG
42
1
Y
1
C
CZ
ARG
41
C
CZ
ARG
42
1
Y
1
C
NH1
ARG
41
C
NH1
ARG
42
1
Y
1
C
NH2
ARG
41
C
NH2
ARG
42
1
Y
1
C
CG
LYS
42
C
CG
LYS
43
1
Y
1
C
CD
LYS
42
C
CD
LYS
43
1
Y
1
C
CE
LYS
42
C
CE
LYS
43
1
Y
1
C
NZ
LYS
42
C
NZ
LYS
43
1
Y
1
C
CG
GLN
43
C
CG
GLN
44
1
Y
1
C
CD
GLN
43
C
CD
GLN
44
1
Y
1
C
OE1
GLN
43
C
OE1
GLN
44
1
Y
1
C
NE2
GLN
43
C
NE2
GLN
44
1
Y
1
C
CG1
VAL
44
C
CG1
VAL
45
1
Y
1
C
CG2
VAL
44
C
CG2
VAL
45
1
Y
1
C
CG1
ILE
46
C
CG1
ILE
47
1
Y
1
C
CG2
ILE
46
C
CG2
ILE
47
1
Y
1
C
CD1
ILE
46
C
CD1
ILE
47
1
Y
1
C
CG
GLU
49
C
CG
GLU
50
1
Y
1
C
CD
GLU
49
C
CD
GLU
50
1
Y
1
C
OE1
GLU
49
C
OE1
GLU
50
1
Y
1
C
OE2
GLU
49
C
OE2
GLU
50
1
Y
1
C
CG
LEU
52
C
CG
LEU
53
1
Y
1
C
CD1
LEU
52
C
CD1
LEU
53
1
Y
1
C
CD2
LEU
52
C
CD2
LEU
53
1
Y
1
C
CG
ASP
54
C
CG
ASP
55
1
Y
1
C
OD1
ASP
54
C
OD1
ASP
55
1
Y
1
C
OD2
ASP
54
C
OD2
ASP
55
1
Y
1
C
CG
GLN
99
C
CG
GLN
100
1
Y
1
C
CD
GLN
99
C
CD
GLN
100
1
Y
1
C
OE1
GLN
99
C
OE1
GLN
100
1
Y
1
C
NE2
GLN
99
C
NE2
GLN
100
1
Y
1
C
CG
ARG
102
C
CG
ARG
103
1
Y
1
C
CD
ARG
102
C
CD
ARG
103
1
Y
1
C
NE
ARG
102
C
NE
ARG
103
1
Y
1
C
CZ
ARG
102
C
CZ
ARG
103
1
Y
1
C
NH1
ARG
102
C
NH1
ARG
103
1
Y
1
C
NH2
ARG
102
C
NH2
ARG
103
1
Y
1
C
CG
ASP
105
C
CG
ASP
106
1
Y
1
C
OD1
ASP
105
C
OD1
ASP
106
1
Y
1
C
OD2
ASP
105
C
OD2
ASP
106
1
Y
1
C
OG
SER
106
C
OG
SER
107
1
Y
1
C
CG
GLU
107
C
CG
GLU
108
1
Y
1
C
CD
GLU
107
C
CD
GLU
108
1
Y
1
C
OE1
GLU
107
C
OE1
GLU
108
1
Y
1
C
OE2
GLU
107
C
OE2
GLU
108
1
Y
1
C
CG
ASP
108
C
CG
ASP
109
1
Y
1
C
OD1
ASP
108
C
OD1
ASP
109
1
Y
1
C
OD2
ASP
108
C
OD2
ASP
109
1
Y
1
A
GLY
0
A
GLY
1
1
Y
1
A
GLU
31
A
GLU
32
1
Y
1
A
TYR
32
A
TYR
33
1
Y
1
A
ASP
33
A
ASP
34
1
Y
1
A
PRO
34
A
PRO
35
1
Y
1
A
THR
35
A
THR
36
1
Y
1
A
GLU
62
A
GLU
63
1
Y
1
A
GLU
63
A
GLU
64
1
Y
1
A
TYR
64
A
TYR
65
1
Y
1
A
GLU
168
A
GLU
169
1
Y
1
A
LYS
169
A
LYS
170
1
Y
1
B
GLY
0
B
GLY
1
1
Y
1
B
ASP
30
B
ASP
31
1
Y
1
B
GLU
31
B
GLU
32
1
Y
1
B
TYR
32
B
TYR
33
1
Y
1
B
ASP
33
B
ASP
34
1
Y
1
B
PRO
34
B
PRO
35
1
Y
1
B
THR
35
B
THR
36
1
Y
1
B
ILE
36
B
ILE
37
1
Y
1
B
GLU
37
B
GLU
38
1
Y
1
B
GLY
60
B
GLY
61
1
Y
1
B
GLN
61
B
GLN
62
1
Y
1
B
GLU
62
B
GLU
63
1
Y
1
B
GLU
63
B
GLU
64
1
Y
1
B
LYS
169
B
LYS
170
1
Y
1
C
GLY
0
C
GLY
1
1
Y
1
C
MET
1
C
MET
2
1
Y
1
C
VAL
29
C
VAL
30
1
Y
1
C
ASP
30
C
ASP
31
1
Y
1
C
GLU
31
C
GLU
32
1
Y
1
C
TYR
32
C
TYR
33
1
Y
1
C
ASP
33
C
ASP
34
1
Y
1
C
PRO
34
C
PRO
35
1
Y
1
C
THR
35
C
THR
36
1
Y
1
C
ILE
36
C
ILE
37
1
Y
1
C
GLU
37
C
GLU
38
1
Y
1
C
ASP
38
C
ASP
39
1
Y
1
C
SER
39
C
SER
40
1
Y
1
C
GLY
60
C
GLY
61
1
Y
1
C
GLN
61
C
GLN
62
1
Y
1
C
GLU
62
C
GLU
63
1
Y
1
C
GLU
63
C
GLU
64
1
Y
1
C
TYR
64
C
TYR
65
1
Y
1
C
SER
65
C
SER
66
1
Y
1
C
ALA
66
C
ALA
67
1
Y
1
C
MET
67
C
MET
68
1
Y
1
C
ARG
68
C
ARG
69
1
Y
1
C
GLU
168
C
GLU
169
1
Y
1
C
LYS
169
C
LYS
170
1
Y
1
A
A
HH11
O
ARG
HOH
161
319
1.52
1
C
C
O
HH12
GLN
ARG
22
149
1.54
1
C
C
OE1
O
GLU
HOH
76
316
2.11
1
A
B
O
O
HOH
HOH
340
311
2.14
1
B
C
OD2
NE2
ASP
GLN
57
150
2.16
1
A
A
O
O
HOH
HOH
316
338
2.17
1
A
A
NH1
O
ARG
HOH
161
319
2.19
1
A
A
HG1
HG1
THR
THR
50
50
1.29
1_555
2_857
1
A
ARG
149
79.01
-0.30
1
B
LYS
117
71.80
34.13
1
C
GLU
49
28.37
64.02
1
C
LYS
117
70.71
35.28
1
C
ARG
149
83.60
-7.69
179.800
58.0613
21.400
0.2258
0.1902
0.1923
1.94
23.4790
2003
34101
5.8700
99.7700
1.000
0.230
0.2100
1
1.340
MOLECULAR REPLACEMENT
23.4700
0.8000
1.1000
PDB ENTRY 3GFT
ML
FLAT BULK SOLVENT MODEL
1.94
23.4790
87
3735
108
0
3540
0.005
3721
0.973
5045
0.048
585
0.004
626
16.230
1359
0.2470
0.2421
1.9855
135
2211
2346
14
98.0000
0.2777
0.2350
2.0392
144
2279
2423
14
100.0000
0.2672
0.2197
2.0991
146
2300
2446
14
100.0000
0.2606
0.2188
2.1669
137
2311
2448
14
100.0000
0.2433
0.2061
2.2442
148
2255
2403
14
100.0000
0.2596
0.1969
2.3340
140
2299
2439
14
100.0000
0.2803
0.1999
2.4401
143
2279
2422
14
100.0000
0.2337
0.2072
2.5686
139
2312
2451
14
100.0000
0.2791
0.2060
2.7293
149
2300
2449
14
100.0000
0.2103
0.2098
2.9397
140
2281
2421
14
100.0000
0.2315
0.2000
3.2349
147
2305
2452
14
100.0000
0.2156
0.1812
3.7014
143
2309
2452
14
100.0000
0.1965
0.1569
4.6574
142
2319
2461
14
100.0000
0.2119
0.1875
23.4803
150
2338
2488
14
100.0000
1.94
25.00
4M21
34110
0
-3
0.064
0.064
1
17.621
4.1
99.9
0.407
1.94
1.97
3.493
0.407
1
4.1
100.0
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
Tue Dec 6 04:17:27 2011 (svn )
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
2.4.0
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
dev_1402
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
BOS
data reduction
HKL-2000
data scaling
HKL-2000
Crystal Structure of small molecule acrylamide 11 covalently bound to K-Ras G12C
1
N
N
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
2
N
N
4
N
N
4
N
N
4
N
N
A
GLY
15
A
GLY
16
HELX_P
A
ASN
26
A
ASN
27
1
1
12
A
ALA
66
A
ALA
67
HELX_P
A
GLY
75
A
GLY
76
1
2
10
A
ASN
86
A
ASN
87
HELX_P
A
ASP
92
A
ASP
93
1
3
7
A
ASP
92
A
ASP
93
HELX_P
A
ASP
105
A
ASP
106
1
4
14
A
ASP
126
A
ASP
127
HELX_P
A
GLY
138
A
GLY
139
1
5
13
A
GLY
151
A
GLY
152
HELX_P
A
LYS
167
A
LYS
168
1
6
17
B
GLY
15
B
GLY
16
HELX_P
B
ASN
26
B
ASN
27
1
7
12
B
SER
65
B
SER
66
HELX_P
B
GLY
75
B
GLY
76
1
8
11
B
ASN
86
B
ASN
87
HELX_P
B
LYS
104
B
LYS
105
1
9
19
B
ASP
126
B
ASP
127
HELX_P
B
GLY
138
B
GLY
139
1
10
13
B
GLY
151
B
GLY
152
HELX_P
B
LYS
167
B
LYS
168
1
11
17
C
GLY
15
C
GLY
16
HELX_P
C
ASN
26
C
ASN
27
1
12
12
C
GLN
70
C
GLN
71
HELX_P
C
GLY
75
C
GLY
76
1
13
6
C
ASN
86
C
ASN
87
HELX_P
C
ASP
105
C
ASP
106
1
14
20
C
ASP
126
C
ASP
127
HELX_P
C
GLY
138
C
GLY
139
1
15
13
C
GLY
151
C
GLY
152
HELX_P
C
LYS
167
C
LYS
168
1
16
17
covale
1.829
one
B
CYS
12
B
SG
CYS
13
1_555
B
21Y
201
E
C21
21Y
1_555
SIGNALING PROTEIN/INHIBITOR
GTPase, GDP bound, small molecule inhibitor, covalent binder, SIGNALING PROTEIN-INHIBITOR complex
RASK_HUMAN
UNP
1
1
P01116
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLC
VFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLV
REIRQYRLK
1
169
4M21
1
169
P01116
A
1
2
170
1
169
4M21
1
169
P01116
B
1
2
170
1
169
4M21
1
169
P01116
C
1
2
170
1
expression tag
GLY
0
4M21
A
P01116
UNP
1
1
GLY
variant
CYS
12
4M21
A
P01116
UNP
12
13
1
CYS
engineered mutation
SER
51
4M21
A
P01116
UNP
51
52
1
CYS
engineered mutation
LEU
80
4M21
A
P01116
UNP
80
81
1
CYS
engineered mutation
SER
118
4M21
A
P01116
UNP
118
119
1
ARG
SEE REMARK 999
GLY
151
4M21
A
P01116
UNP
151
152
1
GLU
SEE REMARK 999
ASP
153
4M21
A
P01116
UNP
153
154
1
GLN
SEE REMARK 999
LYS
165
4M21
A
P01116
UNP
165
166
1
TYR
SEE REMARK 999
HIS
166
4M21
A
P01116
UNP
166
167
1
ARG
SEE REMARK 999
LYS
167
4M21
A
P01116
UNP
167
168
1
LEU
SEE REMARK 999
GLU
168
4M21
A
P01116
UNP
168
169
2
expression tag
GLY
0
4M21
B
P01116
UNP
1
2
GLY
variant
CYS
12
4M21
B
P01116
UNP
12
13
2
CYS
engineered mutation
SER
51
4M21
B
P01116
UNP
51
52
2
CYS
engineered mutation
LEU
80
4M21
B
P01116
UNP
80
81
2
CYS
engineered mutation
SER
118
4M21
B
P01116
UNP
118
119
2
ARG
SEE REMARK 999
GLY
151
4M21
B
P01116
UNP
151
152
2
GLU
SEE REMARK 999
ASP
153
4M21
B
P01116
UNP
153
154
2
GLN
SEE REMARK 999
LYS
165
4M21
B
P01116
UNP
165
166
2
TYR
SEE REMARK 999
HIS
166
4M21
B
P01116
UNP
166
167
2
ARG
SEE REMARK 999
LYS
167
4M21
B
P01116
UNP
167
168
2
LEU
SEE REMARK 999
GLU
168
4M21
B
P01116
UNP
168
169
3
expression tag
GLY
0
4M21
C
P01116
UNP
1
3
GLY
variant
CYS
12
4M21
C
P01116
UNP
12
13
3
CYS
engineered mutation
SER
51
4M21
C
P01116
UNP
51
52
3
CYS
engineered mutation
LEU
80
4M21
C
P01116
UNP
80
81
3
CYS
engineered mutation
SER
118
4M21
C
P01116
UNP
118
119
3
ARG
SEE REMARK 999
GLY
151
4M21
C
P01116
UNP
151
152
3
GLU
SEE REMARK 999
ASP
153
4M21
C
P01116
UNP
153
154
3
GLN
SEE REMARK 999
LYS
165
4M21
C
P01116
UNP
165
166
3
TYR
SEE REMARK 999
HIS
166
4M21
C
P01116
UNP
166
167
3
ARG
SEE REMARK 999
LYS
167
4M21
C
P01116
UNP
167
168
3
LEU
SEE REMARK 999
GLU
168
4M21
C
P01116
UNP
168
169
6
6
6
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
A
SER
39
A
SER
40
A
ILE
46
A
ILE
47
A
GLU
49
A
GLU
50
A
THR
58
A
THR
59
A
THR
2
A
THR
3
A
VAL
9
A
VAL
10
A
GLY
77
A
GLY
78
A
ALA
83
A
ALA
84
A
MET
111
A
MET
112
A
ASN
116
A
ASN
117
A
PHE
141
A
PHE
142
A
GLU
143
A
GLU
144
B
ARG
41
B
ARG
42
B
ILE
46
B
ILE
47
B
GLU
49
B
GLU
50
B
ILE
55
B
ILE
56
B
THR
2
B
THR
3
B
GLY
10
B
GLY
11
B
GLY
77
B
GLY
78
B
ALA
83
B
ALA
84
B
MET
111
B
MET
112
B
ASN
116
B
ASN
117
B
PHE
141
B
PHE
142
B
GLU
143
B
GLU
144
C
ARG
41
C
ARG
42
C
VAL
44
C
VAL
45
C
SER
51
C
SER
52
C
ASP
57
C
ASP
58
C
GLU
3
C
GLU
4
C
GLY
10
C
GLY
11
C
GLY
77
C
GLY
78
C
ALA
83
C
ALA
84
C
MET
111
C
MET
112
C
ASN
116
C
ASN
117
C
PHE
141
C
PHE
142
C
GLU
143
C
GLU
144
BINDING SITE FOR RESIDUE GDP A 201
A
GDP
201
Software
18
BINDING SITE FOR RESIDUE 21Y B 201
B
21Y
201
Software
8
BINDING SITE FOR RESIDUE GDP B 202
B
GDP
202
Software
15
BINDING SITE FOR RESIDUE GDP C 201
C
GDP
201
Software
15
A
GLY
13
A
GLY
14
18
1_555
A
VAL
14
A
VAL
15
18
1_555
A
GLY
15
A
GLY
16
18
1_555
A
LYS
16
A
LYS
17
18
1_555
A
SER
17
A
SER
18
18
1_555
A
ALA
18
A
ALA
19
18
1_555
A
PHE
28
A
PHE
29
18
1_555
A
ASN
116
A
ASN
117
18
1_555
A
LYS
117
A
LYS
118
18
1_555
A
ASP
119
A
ASP
120
18
1_555
A
LEU
120
A
LEU
121
18
1_555
A
SER
145
A
SER
146
18
1_555
A
ALA
146
A
ALA
147
18
1_555
A
LYS
147
A
LYS
148
18
1_555
A
HOH
311
H
HOH
18
1_555
A
HOH
337
H
HOH
18
1_555
A
HOH
339
H
HOH
18
1_555
A
HOH
344
H
HOH
18
1_555
B
VAL
9
B
VAL
10
8
1_555
B
GLY
10
B
GLY
11
8
1_555
B
CYS
12
B
CYS
13
8
1_555
B
THR
58
B
THR
59
8
1_555
B
ARG
68
B
ARG
69
8
1_555
B
MET
72
B
MET
73
8
1_555
B
TYR
96
B
TYR
97
8
1_555
B
GLN
99
B
GLN
100
8
1_555
B
GLY
13
B
GLY
14
15
1_555
B
VAL
14
B
VAL
15
15
1_555
B
GLY
15
B
GLY
16
15
1_555
B
LYS
16
B
LYS
17
15
1_555
B
SER
17
B
SER
18
15
1_555
B
ALA
18
B
ALA
19
15
1_555
B
PHE
28
B
PHE
29
15
1_555
B
ASN
116
B
ASN
117
15
1_555
B
LYS
117
B
LYS
118
15
1_555
B
ASP
119
B
ASP
120
15
1_555
B
LEU
120
B
LEU
121
15
1_555
B
SER
145
B
SER
146
15
1_555
B
ALA
146
B
ALA
147
15
1_555
B
LYS
147
B
LYS
148
15
1_555
B
HOH
319
I
HOH
15
1_555
C
GLY
13
C
GLY
14
15
1_555
C
VAL
14
C
VAL
15
15
1_555
C
GLY
15
C
GLY
16
15
1_555
C
LYS
16
C
LYS
17
15
1_555
C
SER
17
C
SER
18
15
1_555
C
ALA
18
C
ALA
19
15
1_555
C
PHE
28
C
PHE
29
15
1_555
C
ALA
59
C
ALA
60
15
1_555
C
ASN
116
C
ASN
117
15
1_555
C
LYS
117
C
LYS
118
15
1_555
C
ASP
119
C
ASP
120
15
1_555
C
LEU
120
C
LEU
121
15
1_555
C
SER
145
C
SER
146
15
1_555
C
ALA
146
C
ALA
147
15
1_555
C
LYS
147
C
LYS
148
15
1_555
5
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