0.018330
0.000000
0.005075
-0.000000
0.012615
0.000000
0.000000
-0.000000
0.018895
0.000000
0.000000
0.000000
Koag, M.C.
Min, K.
Monzingo, A.F.
Lee, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.000
105.480
90.000
54.554
79.271
54.915
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C10 H13 Br N5 O7 P
426.117
n
8-BROMO-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
P
N
75
N
O
N
76
N
O
N
77
N
O
N
78
N
C
N
79
R
C
N
80
N
O
N
81
R
C
Y
82
N
N
Y
83
N
C
Y
84
N
N
Y
85
N
C
Y
86
N
C
N
87
N
N
N
88
N
C
N
89
N
N
N
90
N
N
N
91
N
C
N
92
N
O
N
93
N
C
N
94
S
C
N
95
N
O
N
96
N
O
N
97
N
BR
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
N
N
112
R
C
N
113
N
C
N
114
N
O
N
115
N
C
N
116
N
S
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
O
N
126
N
P
N
127
N
O
N
128
N
O
N
129
N
O
N
130
N
C
N
131
R
C
N
132
N
O
N
133
S
C
N
134
N
O
N
135
N
C
N
136
R
C
Y
137
N
N
Y
138
N
C
Y
139
N
N
Y
140
N
C
Y
141
N
C
N
142
N
N
Y
143
N
N
Y
144
N
C
Y
145
N
N
Y
146
N
C
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
O
N
162
N
P
N
163
N
O
N
164
N
O
N
165
N
O
N
166
N
C
N
167
R
C
N
168
N
O
N
169
S
C
N
170
N
O
N
171
N
C
N
172
R
C
N
173
N
N
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
C
N
180
N
C
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
O
N
196
N
P
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
C
N
201
R
C
N
202
N
O
N
203
S
C
N
204
N
O
N
205
N
C
N
206
R
C
Y
207
N
N
Y
208
N
C
Y
209
N
N
Y
210
N
C
N
211
N
C
N
212
N
O
N
213
N
N
N
214
N
C
N
215
N
N
N
216
N
N
Y
217
N
C
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
O
N
233
N
P
N
234
N
O
N
235
N
O
N
236
N
O
N
237
N
C
N
238
R
C
N
239
N
O
N
240
S
C
N
241
N
O
N
242
N
C
N
243
R
C
N
244
N
N
N
245
N
C
N
246
N
O
N
247
N
N
N
248
N
C
N
249
N
O
N
250
N
C
N
251
N
C
N
252
N
C
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
N
N
269
S
C
N
270
N
C
N
271
N
O
N
272
N
C
N
273
N
C
N
274
N
C
N
275
N
O
N
276
N
N
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
N
N
289
S
C
N
290
N
C
N
291
N
O
N
292
N
C
N
293
N
C
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
N
C
N
309
N
C
N
310
N
O
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
N
N
318
S
C
N
319
N
C
N
320
N
O
N
321
N
C
Y
322
N
C
Y
323
N
N
Y
324
N
C
Y
325
N
C
Y
326
N
N
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
S
C
N
346
N
C
N
347
N
C
N
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
N
N
364
S
C
N
365
N
C
N
366
N
O
N
367
N
C
N
368
N
C
N
369
N
C
N
370
N
C
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
N
N
386
S
C
N
387
N
C
N
388
N
O
N
389
N
C
N
390
N
C
N
391
N
C
N
392
N
C
N
393
N
N
N
394
N
O
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
N
N
411
S
C
N
412
N
C
N
413
N
O
N
414
N
C
N
415
N
C
N
416
N
S
N
417
N
C
N
418
N
O
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
NA
N
431
N
N
N
432
S
C
N
433
N
C
N
434
N
O
N
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
Y
440
N
C
Y
441
N
C
N
442
N
O
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
N
N
455
S
C
N
456
N
C
N
457
N
O
N
458
N
C
N
459
N
C
N
460
N
C
N
461
N
O
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
N
N
472
S
C
N
473
N
C
N
474
N
O
N
475
N
C
N
476
N
O
N
477
N
O
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
N
N
486
S
C
N
487
N
C
N
488
N
O
N
489
R
C
N
490
N
O
N
491
N
C
N
492
N
O
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
N
N
503
S
C
N
504
N
C
N
505
N
O
N
506
N
C
Y
507
N
C
Y
508
N
C
Y
509
N
C
Y
510
N
N
Y
511
N
C
Y
512
N
C
Y
513
N
C
Y
514
N
C
Y
515
N
C
N
516
N
O
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
N
N
530
S
C
N
531
N
C
N
532
N
O
N
533
N
C
Y
534
N
C
Y
535
N
C
Y
536
N
C
Y
537
N
C
Y
538
N
C
Y
539
N
C
N
540
N
O
N
541
N
O
N
542
N
H
N
543
N
H
N
544
N
H
N
545
N
H
N
546
N
H
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
H
N
552
N
H
N
553
N
N
N
554
S
C
N
555
N
C
N
556
N
O
N
557
N
C
N
558
N
C
N
559
N
C
N
560
N
O
N
561
N
H
N
562
N
H
N
563
N
H
N
564
N
H
N
565
N
H
N
566
N
H
N
567
N
H
N
568
N
H
N
569
N
H
N
570
N
H
N
571
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
Y
86
N
sing
Y
87
N
sing
Y
88
N
doub
N
89
N
sing
Y
90
N
sing
Y
91
N
doub
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
Y
145
N
sing
Y
146
N
sing
Y
147
N
doub
N
148
N
sing
Y
149
N
sing
Y
150
N
sing
Y
151
N
doub
N
152
N
sing
Y
153
N
doub
N
154
N
sing
N
155
N
sing
Y
156
N
sing
Y
157
N
doub
N
158
N
sing
Y
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
doub
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
Y
218
N
sing
Y
219
N
sing
Y
220
N
doub
N
221
N
sing
Y
222
N
sing
N
223
N
sing
Y
224
N
doub
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
doub
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
doub
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
doub
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
doub
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
Y
328
N
sing
Y
329
N
doub
Y
330
N
doub
N
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
doub
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
doub
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
doub
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
doub
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
Y
436
N
doub
Y
437
N
sing
Y
438
N
sing
N
439
N
sing
Y
440
N
doub
N
441
N
sing
Y
442
N
doub
N
443
N
sing
Y
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
doub
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
doub
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
doub
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
doub
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
Y
505
N
doub
Y
506
N
sing
Y
507
N
sing
N
508
N
sing
Y
509
N
doub
Y
510
N
sing
Y
511
N
sing
N
512
N
sing
Y
513
N
sing
Y
514
N
doub
N
515
N
sing
Y
516
N
doub
N
517
N
sing
Y
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
doub
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
Y
533
N
doub
Y
534
N
sing
Y
535
N
sing
N
536
N
sing
Y
537
N
doub
N
538
N
sing
Y
539
N
doub
N
540
N
sing
Y
541
N
sing
N
542
N
sing
N
543
N
sing
N
544
N
sing
N
545
N
sing
N
546
N
sing
N
547
N
sing
N
548
N
sing
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
doub
N
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
N
557
N
sing
N
558
N
sing
N
559
N
sing
N
560
N
sing
N
561
N
sing
N
562
N
sing
N
563
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
289
6289
6298
10.1074/jbc.M113.537803
24425881
Structural basis for promutagenicity of 8-halogenated Guanine.
2014
10.2210/pdb4m2y/pdb
pdb_00004m2y
100
1
IMAGE PLATE
2013-03-06
RIGAKU RAXIS IV++
Varimax focusing mirror
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU MICROMAX-007 HF
37081.309
DNA polymerase beta
2.7.7.7, 4.2.99.-
1
man
polymer
4923.040
template DNA strand
1
syn
polymer
3085.029
up-primer
1
syn
polymer
1536.035
down-primer
1
syn
polymer
22.990
SODIUM ION
2
syn
non-polymer
18.015
water
72
nat
water
no
no
LNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQ
DDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVD
SEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEY
PHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREP
KDRSE
LNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQ
DDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVD
SEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEY
PHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREP
KDRSE
A
polypeptide(L)
no
yes
(DC)(DC)(DG)(DA)(DC)(BGM)(DT)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)
CCGACGTCGCATCAGC
T
polydeoxyribonucleotide
no
no
(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DA)
GCTGATGCGA
P
polydeoxyribonucleotide
no
no
(DG)(DT)(DC)(DG)(DG)
GTCGG
D
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
POLB
9606
Homo sapiens
562
Escherichia coli
1
2.45
49.88
VAPOR DIFFUSION, SITTING DROP
7.5
14-23% PEG 3340, 350mM sodium acetate in 50 mM imidazole, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
295
-9.420
1
19
T
1
D
5
1.797
T_DC1:DG5_D
1
-8.714
0.474
0.649
-0.137
-1.408
1
19
T
2
D
4
2.157
T_DC2:DG4_D
2
-6.837
0.402
-0.101
-0.193
-1.426
1
19
T
3
D
3
-2.612
T_DG3:DC3_D
3
-9.319
-0.084
-0.069
-0.046
1.987
1
20
T
4
D
2
-3.549
T_DA4:DT2_D
4
-0.878
-0.052
0.053
-0.099
14.493
1
19
T
5
D
1
-1.319
T_DC5:DG1_D
5
7.290
0.336
-0.173
-0.159
-14.559
1
20
T
7
P
10
1.857
T_DT7:DA10_P
6
-8.656
-0.550
-0.287
-0.219
3.255
1
19
T
8
P
9
-0.010
T_DC8:DG9_P
7
-12.282
0.070
-0.377
-0.122
-0.459
1
19
T
9
P
8
-2.961
T_DG9:DC8_P
8
-6.749
-0.233
0.110
-0.235
5.856
1
19
T
10
P
7
-2.097
T_DC10:DG7_P
9
-11.955
0.182
0.067
-0.074
5.352
1
20
T
11
P
6
-1.304
T_DA11:DT6_P
10
-14.045
-0.286
0.426
-0.116
9.763
1
20
T
12
P
5
2.495
T_DT12:DA5_P
11
-10.952
0.178
-0.141
0.036
2.333
1
19
T
13
P
4
3.761
T_DC13:DG4_P
12
-14.251
0.413
-0.174
0.055
-2.787
1
20
T
14
P
3
-3.459
T_DA14:DT3_P
13
-8.641
0.111
0.047
-0.027
1.995
1
19
T
15
P
2
-2.966
T_DG15:DC2_P
14
-7.101
-0.305
0.135
-0.234
5.615
1
19
T
16
P
1
2.034
T_DC16:DG1_P
15
-12.016
-0.082
0.059
-0.229
3.183
37.170
T
T
1
2
-2.760
D
D
5
4
3.077
-1.744
1.011
0.842
TT_DC1DC2:DG4DG5_DD
1
8.525
-13.490
36.172
1.547
-0.483
3.457
33.487
T
T
2
3
19.247
D
D
4
3
3.307
10.874
-1.017
0.715
TT_DC2DG3:DC3DG4_DD
2
-3.968
7.025
31.477
-0.673
1.067
3.150
35.858
T
T
3
4
0.902
D
D
3
2
3.120
0.554
-0.466
-0.074
TT_DG3DA4:DT2DC3_DD
3
-3.932
6.399
35.644
-0.196
0.215
3.062
28.899
T
T
4
5
4.388
D
D
2
1
3.086
2.188
0.680
-0.455
TT_DA4DC5:DG1DT2_DD
4
0.846
-1.697
28.806
-1.369
-1.185
2.973
31.827
T
T
7
8
5.519
P
P
10
9
2.991
3.021
-0.247
0.087
TT_DT7DC8:DG9DA10_PP
5
1.463
-2.673
31.654
-0.345
0.695
3.625
37.787
T
T
8
9
16.716
P
P
9
8
3.444
10.608
-1.064
0.617
TT_DC8DG9:DC8DG9_PP
6
-8.095
12.755
35.434
-0.577
0.477
3.128
30.709
T
T
9
10
5.846
P
P
8
7
3.171
3.091
-0.247
-0.299
TT_DG9DC10:DG7DC8_PP
7
-0.251
0.475
30.556
-1.150
0.418
3.070
35.977
T
T
10
11
12.173
P
P
7
6
3.142
7.463
-0.010
-0.019
TT_DC10DA11:DT6DG7_PP
8
-2.076
3.386
35.160
-1.052
-0.268
3.293
33.506
T
T
11
12
-5.607
P
P
6
5
3.213
-3.216
0.580
-0.459
TT_DA11DT12:DA5DT6_PP
9
5.170
-9.015
32.964
-0.266
-0.154
3.293
43.524
T
T
12
13
-1.734
P
P
5
4
3.275
-1.285
0.357
-0.088
TT_DT12DC13:DG4DA5_PP
10
3.132
-4.228
43.399
0.007
-0.178
3.367
33.418
T
T
13
14
13.163
P
P
4
3
3.413
7.507
-0.402
0.136
TT_DC13DA14:DT3DG4_PP
11
-0.673
1.180
32.580
-1.068
0.583
3.083
30.762
T
T
14
15
3.689
P
P
3
2
3.133
1.954
0.175
-0.384
TT_DA14DG15:DC2DT3_PP
12
-2.205
4.164
30.623
-1.087
-0.740
3.089
34.870
T
T
15
16
7.379
P
P
2
1
3.177
4.411
0.651
-0.591
TT_DG15DC16:DG1DC2_PP
13
0.504
-0.843
34.595
-1.630
-1.013
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Database references
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2014-01-22
1
1
2014-02-12
1
2
2014-03-19
1
3
2023-09-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
open conformation of pol B
pol B complexed with gapped DNA at n position
RCSB
Y
RCSB
2013-08-05
REL
REL
NA
SODIUM ION
HOH
water
this is a synthetic sequence.
sample
this is complementary sequence upstream of gap.
sample
this is complementary sequence downstream of gap.
sample
3ISB
PDB ENTRY 3ISB
PDB
experimental model
NA
341
5
NA
NA
401
A
NA
342
5
NA
NA
402
A
HOH
1
6
HOH
HOH
501
A
HOH
2
6
HOH
HOH
502
A
HOH
4
6
HOH
HOH
503
A
HOH
5
6
HOH
HOH
504
A
HOH
8
6
HOH
HOH
505
A
HOH
9
6
HOH
HOH
506
A
HOH
10
6
HOH
HOH
507
A
HOH
11
6
HOH
HOH
508
A
HOH
12
6
HOH
HOH
509
A
HOH
13
6
HOH
HOH
510
A
HOH
14
6
HOH
HOH
511
A
HOH
17
6
HOH
HOH
512
A
HOH
18
6
HOH
HOH
513
A
HOH
19
6
HOH
HOH
514
A
HOH
20
6
HOH
HOH
515
A
HOH
21
6
HOH
HOH
516
A
HOH
22
6
HOH
HOH
517
A
HOH
23
6
HOH
HOH
518
A
HOH
24
6
HOH
HOH
519
A
HOH
25
6
HOH
HOH
520
A
HOH
26
6
HOH
HOH
521
A
HOH
27
6
HOH
HOH
522
A
HOH
29
6
HOH
HOH
523
A
HOH
30
6
HOH
HOH
524
A
HOH
33
6
HOH
HOH
525
A
HOH
36
6
HOH
HOH
526
A
HOH
37
6
HOH
HOH
527
A
HOH
39
6
HOH
HOH
528
A
HOH
42
6
HOH
HOH
529
A
HOH
43
6
HOH
HOH
530
A
HOH
44
6
HOH
HOH
531
A
HOH
45
6
HOH
HOH
532
A
HOH
47
6
HOH
HOH
533
A
HOH
48
6
HOH
HOH
534
A
HOH
49
6
HOH
HOH
535
A
HOH
50
6
HOH
HOH
536
A
HOH
53
6
HOH
HOH
537
A
HOH
56
6
HOH
HOH
538
A
HOH
57
6
HOH
HOH
539
A
HOH
61
6
HOH
HOH
540
A
HOH
63
6
HOH
HOH
541
A
HOH
67
6
HOH
HOH
542
A
HOH
68
6
HOH
HOH
543
A
HOH
69
6
HOH
HOH
544
A
HOH
71
6
HOH
HOH
545
A
HOH
72
6
HOH
HOH
546
A
HOH
73
6
HOH
HOH
547
A
HOH
74
6
HOH
HOH
548
A
HOH
75
6
HOH
HOH
549
A
HOH
77
6
HOH
HOH
550
A
HOH
78
6
HOH
HOH
551
A
HOH
79
6
HOH
HOH
552
A
HOH
81
6
HOH
HOH
553
A
HOH
3
6
HOH
HOH
554
A
HOH
54
6
HOH
HOH
555
A
HOH
6
6
HOH
HOH
101
T
HOH
16
6
HOH
HOH
102
T
HOH
28
6
HOH
HOH
103
T
HOH
32
6
HOH
HOH
104
T
HOH
34
6
HOH
HOH
105
T
HOH
35
6
HOH
HOH
106
T
HOH
38
6
HOH
HOH
107
T
HOH
41
6
HOH
HOH
108
T
HOH
64
6
HOH
HOH
109
T
HOH
65
6
HOH
HOH
110
T
HOH
7
6
HOH
HOH
101
P
HOH
15
6
HOH
HOH
102
P
HOH
31
6
HOH
HOH
103
P
HOH
40
6
HOH
HOH
104
P
HOH
46
6
HOH
HOH
105
P
HOH
58
6
HOH
HOH
101
D
HOH
59
6
HOH
HOH
102
D
LEU
11
n
1
LEU
11
A
ASN
12
n
2
ASN
12
A
GLY
13
n
3
GLY
13
A
GLY
14
n
4
GLY
14
A
ILE
15
n
5
ILE
15
A
THR
16
n
6
THR
16
A
ASP
17
n
7
ASP
17
A
MET
18
n
8
MET
18
A
LEU
19
n
9
LEU
19
A
THR
20
n
10
THR
20
A
GLU
21
n
11
GLU
21
A
LEU
22
n
12
LEU
22
A
ALA
23
n
13
ALA
23
A
ASN
24
n
14
ASN
24
A
PHE
25
n
15
PHE
25
A
GLU
26
n
16
GLU
26
A
LYS
27
n
17
LYS
27
A
ASN
28
n
18
ASN
28
A
VAL
29
n
19
VAL
29
A
SER
30
n
20
SER
30
A
GLN
31
n
21
GLN
31
A
ALA
32
n
22
ALA
32
A
ILE
33
n
23
ILE
33
A
HIS
34
n
24
HIS
34
A
LYS
35
n
25
LYS
35
A
TYR
36
n
26
TYR
36
A
ASN
37
n
27
ASN
37
A
ALA
38
n
28
ALA
38
A
TYR
39
n
29
TYR
39
A
ARG
40
n
30
ARG
40
A
LYS
41
n
31
LYS
41
A
ALA
42
n
32
ALA
42
A
ALA
43
n
33
ALA
43
A
SER
44
n
34
SER
44
A
VAL
45
n
35
VAL
45
A
ILE
46
n
36
ILE
46
A
ALA
47
n
37
ALA
47
A
LYS
48
n
38
LYS
48
A
TYR
49
n
39
TYR
49
A
PRO
50
n
40
PRO
50
A
HIS
51
n
41
HIS
51
A
LYS
52
n
42
LYS
52
A
ILE
53
n
43
ILE
53
A
LYS
54
n
44
LYS
54
A
SER
55
n
45
SER
55
A
GLY
56
n
46
GLY
56
A
ALA
57
n
47
ALA
57
A
GLU
58
n
48
GLU
58
A
ALA
59
n
49
ALA
59
A
LYS
60
n
50
LYS
60
A
LYS
61
n
51
LYS
61
A
LEU
62
n
52
LEU
62
A
PRO
63
n
53
PRO
63
A
GLY
64
n
54
GLY
64
A
VAL
65
n
55
VAL
65
A
GLY
66
n
56
GLY
66
A
THR
67
n
57
THR
67
A
LYS
68
n
58
LYS
68
A
ILE
69
n
59
ILE
69
A
ALA
70
n
60
ALA
70
A
GLU
71
n
61
GLU
71
A
LYS
72
n
62
LYS
72
A
ILE
73
n
63
ILE
73
A
ASP
74
n
64
ASP
74
A
GLU
75
n
65
GLU
75
A
PHE
76
n
66
PHE
76
A
LEU
77
n
67
LEU
77
A
ALA
78
n
68
ALA
78
A
THR
79
n
69
THR
79
A
GLY
80
n
70
GLY
80
A
LYS
81
n
71
LYS
81
A
LEU
82
n
72
LEU
82
A
ARG
83
n
73
ARG
83
A
LYS
84
n
74
LYS
84
A
LEU
85
n
75
LEU
85
A
GLU
86
n
76
GLU
86
A
LYS
87
n
77
LYS
87
A
ILE
88
n
78
ILE
88
A
ARG
89
n
79
ARG
89
A
GLN
90
n
80
GLN
90
A
ASP
91
n
81
ASP
91
A
ASP
92
n
82
ASP
92
A
THR
93
n
83
THR
93
A
SER
94
n
84
SER
94
A
SER
95
n
85
SER
95
A
SER
96
n
86
SER
96
A
ILE
97
n
87
ILE
97
A
ASN
98
n
88
ASN
98
A
PHE
99
n
89
PHE
99
A
LEU
100
n
90
LEU
100
A
THR
101
n
91
THR
101
A
ARG
102
n
92
ARG
102
A
VAL
103
n
93
VAL
103
A
SER
104
n
94
SER
104
A
GLY
105
n
95
GLY
105
A
ILE
106
n
96
ILE
106
A
GLY
107
n
97
GLY
107
A
PRO
108
n
98
PRO
108
A
SER
109
n
99
SER
109
A
ALA
110
n
100
ALA
110
A
ALA
111
n
101
ALA
111
A
ARG
112
n
102
ARG
112
A
LYS
113
n
103
LYS
113
A
PHE
114
n
104
PHE
114
A
VAL
115
n
105
VAL
115
A
ASP
116
n
106
ASP
116
A
GLU
117
n
107
GLU
117
A
GLY
118
n
108
GLY
118
A
ILE
119
n
109
ILE
119
A
LYS
120
n
110
LYS
120
A
THR
121
n
111
THR
121
A
LEU
122
n
112
LEU
122
A
GLU
123
n
113
GLU
123
A
ASP
124
n
114
ASP
124
A
LEU
125
n
115
LEU
125
A
ARG
126
n
116
ARG
126
A
LYS
127
n
117
LYS
127
A
ASN
128
n
118
ASN
128
A
GLU
129
n
119
GLU
129
A
ASP
130
n
120
ASP
130
A
LYS
131
n
121
LYS
131
A
LEU
132
n
122
LEU
132
A
ASN
133
n
123
ASN
133
A
HIS
134
n
124
HIS
134
A
HIS
135
n
125
HIS
135
A
GLN
136
n
126
GLN
136
A
ARG
137
n
127
ARG
137
A
ILE
138
n
128
ILE
138
A
GLY
139
n
129
GLY
139
A
LEU
140
n
130
LEU
140
A
LYS
141
n
131
LYS
141
A
TYR
142
n
132
TYR
142
A
PHE
143
n
133
PHE
143
A
GLY
144
n
134
GLY
144
A
ASP
145
n
135
ASP
145
A
PHE
146
n
136
PHE
146
A
GLU
147
n
137
GLU
147
A
LYS
148
n
138
LYS
148
A
ARG
149
n
139
ARG
149
A
ILE
150
n
140
ILE
150
A
PRO
151
n
141
PRO
151
A
ARG
152
n
142
ARG
152
A
GLU
153
n
143
GLU
153
A
GLU
154
n
144
GLU
154
A
MET
155
n
145
MET
155
A
LEU
156
n
146
LEU
156
A
GLN
157
n
147
GLN
157
A
MET
158
n
148
MET
158
A
GLN
159
n
149
GLN
159
A
ASP
160
n
150
ASP
160
A
ILE
161
n
151
ILE
161
A
VAL
162
n
152
VAL
162
A
LEU
163
n
153
LEU
163
A
ASN
164
n
154
ASN
164
A
GLU
165
n
155
GLU
165
A
VAL
166
n
156
VAL
166
A
LYS
167
n
157
LYS
167
A
LYS
168
n
158
LYS
168
A
VAL
169
n
159
VAL
169
A
ASP
170
n
160
ASP
170
A
SER
171
n
161
SER
171
A
GLU
172
n
162
GLU
172
A
TYR
173
n
163
TYR
173
A
ILE
174
n
164
ILE
174
A
ALA
175
n
165
ALA
175
A
THR
176
n
166
THR
176
A
VAL
177
n
167
VAL
177
A
CYS
178
n
168
CYS
178
A
GLY
179
n
169
GLY
179
A
SER
180
n
170
SER
180
A
PHE
181
n
171
PHE
181
A
ARG
182
n
172
ARG
182
A
ARG
183
n
173
ARG
183
A
GLY
184
n
174
GLY
184
A
ALA
185
n
175
ALA
185
A
GLU
186
n
176
GLU
186
A
SER
187
n
177
SER
187
A
SER
188
n
178
SER
188
A
GLY
189
n
179
GLY
189
A
ASP
190
n
180
ASP
190
A
MET
191
n
181
MET
191
A
ASP
192
n
182
ASP
192
A
VAL
193
n
183
VAL
193
A
LEU
194
n
184
LEU
194
A
LEU
195
n
185
LEU
195
A
THR
196
n
186
THR
196
A
HIS
197
n
187
HIS
197
A
PRO
198
n
188
PRO
198
A
SER
199
n
189
SER
199
A
PHE
200
n
190
PHE
200
A
THR
201
n
191
THR
201
A
SER
202
n
192
SER
202
A
GLU
203
n
193
GLU
203
A
SER
204
n
194
SER
204
A
n
195
205
A
n
196
206
A
n
197
207
A
n
198
208
A
LYS
209
n
199
LYS
209
A
LEU
210
n
200
LEU
210
A
LEU
211
n
201
LEU
211
A
HIS
212
n
202
HIS
212
A
GLN
213
n
203
GLN
213
A
VAL
214
n
204
VAL
214
A
VAL
215
n
205
VAL
215
A
GLU
216
n
206
GLU
216
A
GLN
217
n
207
GLN
217
A
LEU
218
n
208
LEU
218
A
GLN
219
n
209
GLN
219
A
LYS
220
n
210
LYS
220
A
VAL
221
n
211
VAL
221
A
HIS
222
n
212
HIS
222
A
PHE
223
n
213
PHE
223
A
ILE
224
n
214
ILE
224
A
THR
225
n
215
THR
225
A
ASP
226
n
216
ASP
226
A
THR
227
n
217
THR
227
A
LEU
228
n
218
LEU
228
A
SER
229
n
219
SER
229
A
LYS
230
n
220
LYS
230
A
GLY
231
n
221
GLY
231
A
GLU
232
n
222
GLU
232
A
THR
233
n
223
THR
233
A
LYS
234
n
224
LYS
234
A
PHE
235
n
225
PHE
235
A
MET
236
n
226
MET
236
A
GLY
237
n
227
GLY
237
A
VAL
238
n
228
VAL
238
A
CYS
239
n
229
CYS
239
A
GLN
240
n
230
GLN
240
A
LEU
241
n
231
LEU
241
A
PRO
242
n
232
PRO
242
A
SER
243
n
233
SER
243
A
n
234
244
A
n
235
245
A
ASP
246
n
236
ASP
246
A
GLU
247
n
237
GLU
247
A
LYS
248
n
238
LYS
248
A
GLU
249
n
239
GLU
249
A
TYR
250
n
240
TYR
250
A
PRO
251
n
241
PRO
251
A
HIS
252
n
242
HIS
252
A
ARG
253
n
243
ARG
253
A
ARG
254
n
244
ARG
254
A
ILE
255
n
245
ILE
255
A
ASP
256
n
246
ASP
256
A
ILE
257
n
247
ILE
257
A
ARG
258
n
248
ARG
258
A
LEU
259
n
249
LEU
259
A
ILE
260
n
250
ILE
260
A
PRO
261
n
251
PRO
261
A
LYS
262
n
252
LYS
262
A
ASP
263
n
253
ASP
263
A
GLN
264
n
254
GLN
264
A
TYR
265
n
255
TYR
265
A
TYR
266
n
256
TYR
266
A
CYS
267
n
257
CYS
267
A
GLY
268
n
258
GLY
268
A
VAL
269
n
259
VAL
269
A
LEU
270
n
260
LEU
270
A
TYR
271
n
261
TYR
271
A
PHE
272
n
262
PHE
272
A
THR
273
n
263
THR
273
A
GLY
274
n
264
GLY
274
A
SER
275
n
265
SER
275
A
ASP
276
n
266
ASP
276
A
ILE
277
n
267
ILE
277
A
PHE
278
n
268
PHE
278
A
ASN
279
n
269
ASN
279
A
LYS
280
n
270
LYS
280
A
ASN
281
n
271
ASN
281
A
MET
282
n
272
MET
282
A
ARG
283
n
273
ARG
283
A
ALA
284
n
274
ALA
284
A
HIS
285
n
275
HIS
285
A
ALA
286
n
276
ALA
286
A
LEU
287
n
277
LEU
287
A
GLU
288
n
278
GLU
288
A
LYS
289
n
279
LYS
289
A
GLY
290
n
280
GLY
290
A
PHE
291
n
281
PHE
291
A
THR
292
n
282
THR
292
A
ILE
293
n
283
ILE
293
A
ASN
294
n
284
ASN
294
A
GLU
295
n
285
GLU
295
A
TYR
296
n
286
TYR
296
A
THR
297
n
287
THR
297
A
ILE
298
n
288
ILE
298
A
ARG
299
n
289
ARG
299
A
PRO
300
n
290
PRO
300
A
LEU
301
n
291
LEU
301
A
GLY
302
n
292
GLY
302
A
VAL
303
n
293
VAL
303
A
THR
304
n
294
THR
304
A
GLY
305
n
295
GLY
305
A
VAL
306
n
296
VAL
306
A
ALA
307
n
297
ALA
307
A
GLY
308
n
298
GLY
308
A
GLU
309
n
299
GLU
309
A
PRO
310
n
300
PRO
310
A
LEU
311
n
301
LEU
311
A
PRO
312
n
302
PRO
312
A
VAL
313
n
303
VAL
313
A
ASP
314
n
304
ASP
314
A
SER
315
n
305
SER
315
A
GLU
316
n
306
GLU
316
A
LYS
317
n
307
LYS
317
A
ASP
318
n
308
ASP
318
A
ILE
319
n
309
ILE
319
A
PHE
320
n
310
PHE
320
A
ASP
321
n
311
ASP
321
A
TYR
322
n
312
TYR
322
A
ILE
323
n
313
ILE
323
A
GLN
324
n
314
GLN
324
A
TRP
325
n
315
TRP
325
A
LYS
326
n
316
LYS
326
A
TYR
327
n
317
TYR
327
A
ARG
328
n
318
ARG
328
A
GLU
329
n
319
GLU
329
A
PRO
330
n
320
PRO
330
A
LYS
331
n
321
LYS
331
A
ASP
332
n
322
ASP
332
A
ARG
333
n
323
ARG
333
A
SER
334
n
324
SER
334
A
GLU
335
n
325
GLU
335
A
DC
1
n
1
DC
1
T
DC
2
n
2
DC
2
T
DG
3
n
3
DG
3
T
DA
4
n
4
DA
4
T
DC
5
n
5
DC
5
T
BGM
6
n
6
BGM
6
T
DT
7
n
7
DT
7
T
DC
8
n
8
DC
8
T
DG
9
n
9
DG
9
T
DC
10
n
10
DC
10
T
DA
11
n
11
DA
11
T
DT
12
n
12
DT
12
T
DC
13
n
13
DC
13
T
DA
14
n
14
DA
14
T
DG
15
n
15
DG
15
T
DC
16
n
16
DC
16
T
DG
1
n
1
DG
1
P
DC
2
n
2
DC
2
P
DT
3
n
3
DT
3
P
DG
4
n
4
DG
4
P
DA
5
n
5
DA
5
P
DT
6
n
6
DT
6
P
DG
7
n
7
DG
7
P
DC
8
n
8
DC
8
P
DG
9
n
9
DG
9
P
DA
10
n
10
DA
10
P
DG
1
n
1
DG
1
D
DT
2
n
2
DT
2
D
DC
3
n
3
DC
3
D
DG
4
n
4
DG
4
D
DG
5
n
5
DG
5
D
author_and_software_defined_assembly
PISA
4
tetrameric
4380
-44
20990
A
LYS
60
A
O
LYS
50
1_555
A
NA
402
F
NA
NA
1_555
A
LEU
62
A
O
LEU
52
1_555
85.3
A
LYS
60
A
O
LYS
50
1_555
A
NA
402
F
NA
NA
1_555
A
VAL
65
A
O
VAL
55
1_555
90.3
A
LEU
62
A
O
LEU
52
1_555
A
NA
402
F
NA
NA
1_555
A
VAL
65
A
O
VAL
55
1_555
93.0
A
LYS
60
A
O
LYS
50
1_555
A
NA
402
F
NA
NA
1_555
D
DC
3
D
OP1
DC
3
1_555
173.4
A
LEU
62
A
O
LEU
52
1_555
A
NA
402
F
NA
NA
1_555
D
DC
3
D
OP1
DC
3
1_555
90.5
A
VAL
65
A
O
VAL
55
1_555
A
NA
402
F
NA
NA
1_555
D
DC
3
D
OP1
DC
3
1_555
84.8
A
THR
101
A
O
THR
91
1_555
A
NA
401
E
NA
NA
1_555
A
VAL
103
A
O
VAL
93
1_555
93.6
A
THR
101
A
O
THR
91
1_555
A
NA
401
E
NA
NA
1_555
A
ILE
106
A
O
ILE
96
1_555
93.1
A
VAL
103
A
O
VAL
93
1_555
A
NA
401
E
NA
NA
1_555
A
ILE
106
A
O
ILE
96
1_555
89.0
A
THR
101
A
O
THR
91
1_555
A
NA
401
E
NA
NA
1_555
P
DG
9
C
OP1
DG
9
1_555
162.8
A
VAL
103
A
O
VAL
93
1_555
A
NA
401
E
NA
NA
1_555
P
DG
9
C
OP1
DG
9
1_555
101.9
A
ILE
106
A
O
ILE
96
1_555
A
NA
401
E
NA
NA
1_555
P
DG
9
C
OP1
DG
9
1_555
94.6
A
THR
101
A
O
THR
91
1_555
A
NA
401
E
NA
NA
1_555
P
HOH
101
I
O
HOH
1_555
91.3
A
VAL
103
A
O
VAL
93
1_555
A
NA
401
E
NA
NA
1_555
P
HOH
101
I
O
HOH
1_555
91.2
A
ILE
106
A
O
ILE
96
1_555
A
NA
401
E
NA
NA
1_555
P
HOH
101
I
O
HOH
1_555
175.5
P
DG
9
C
OP1
DG
9
1_555
A
NA
401
E
NA
NA
1_555
P
HOH
101
I
O
HOH
1_555
81.0
T
BGM
6
B
BGM
6
DG
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
150
A
N
ILE
140
A
O
SER
188
A
O
SER
178
A
N
THR
176
A
N
THR
166
A
O
LEU
194
A
O
LEU
184
A
N
LEU
195
A
N
LEU
185
A
O
ARG
258
A
O
ARG
248
A
O
ARG
253
A
O
ARG
243
A
N
CYS
239
A
N
CYS
229
A
O
MET
236
A
O
MET
226
A
N
SER
229
A
N
SER
219
A
N
THR
292
A
N
THR
282
A
O
ARG
299
A
O
ARG
289
1
A
CG
GLU
203
A
CG
GLU
193
1
Y
1
A
CD
GLU
203
A
CD
GLU
193
1
Y
1
A
OE1
GLU
203
A
OE1
GLU
193
1
Y
1
A
OE2
GLU
203
A
OE2
GLU
193
1
Y
1
A
CG
LYS
209
A
CG
LYS
199
1
Y
1
A
CD
LYS
209
A
CD
LYS
199
1
Y
1
A
CE
LYS
209
A
CE
LYS
199
1
Y
1
A
NZ
LYS
209
A
NZ
LYS
199
1
Y
1
A
CG
ASP
246
A
CG
ASP
236
1
Y
1
A
OD1
ASP
246
A
OD1
ASP
236
1
Y
1
A
OD2
ASP
246
A
OD2
ASP
236
1
Y
1
A
CG
GLU
247
A
CG
GLU
237
1
Y
1
A
CD
GLU
247
A
CD
GLU
237
1
Y
1
A
OE1
GLU
247
A
OE1
GLU
237
1
Y
1
A
OE2
GLU
247
A
OE2
GLU
237
1
Y
1
A
THR
205
A
THR
195
1
Y
1
A
LYS
206
A
LYS
196
1
Y
1
A
GLN
207
A
GLN
197
1
Y
1
A
PRO
208
A
PRO
198
1
Y
1
A
LYS
244
A
LYS
234
1
Y
1
A
ASN
245
A
ASN
235
1
Y
1
8.23
1.10
109.80
118.03
T
T
T
C5'
C4'
O4'
DC
DC
DC
1
1
1
N
1
-7.45
0.90
105.70
98.25
P
P
P
O5'
P
OP1
DA
DA
DA
5
5
5
N
1
D
D
P
OP3
DG
DG
1
1
-0.100
0.012
1.607
1.507
N
1
A
PRO
50
-88.34
40.22
1
A
CYS
178
-107.52
-144.04
1
A
GLU
247
-38.57
153.84
1
A
ASN
294
-125.96
-166.78
67.500
28.3099
9.980
0.8100
-0.0000
0.4400
-0.4900
-0.0000
-0.3800
0.9260
0.8850
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY
0.2694
0.2120
0.2151
2.2700
19.8300
1011
19695
5.1000
94.2700
1.000
1.000
7.5500
0.1870
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.3780
0.2650
0.8000
0.8000
1.2000
PDB ENTRY 3ISB
MAXIMUM LIKELIHOOD
MASK
2.2700
19.8300
72
3250
2
633
2543
0.012
0.018
3297
0.001
0.020
2864
1.651
1.794
4568
1.148
3.000
6629
5.830
5.000
316
37.116
24.000
120
16.947
15.000
489
16.637
15.000
18
0.092
0.200
474
0.008
0.020
3260
0.001
0.020
741
1.756
2.680
1273
1.745
2.679
1272
2.731
4.009
1586
0.3910
0.2750
2.3300
61
1287
1348
20
88.3400
2.27
20
4M2Y
20228
20228
0
1
97.1
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
5.7.0032
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
StructureStudio
data reduction
HKL-2000
data scaling
HKL-2000
phasing
MOLREP
Structure of human DNA polymerase beta complexed with 8-BrG as the template base in a 1-nucleotide gapped DNA
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
6
N
N
6
N
N
6
N
N
6
N
N
A
ASN
12
A
ASN
2
HELX_P
A
VAL
29
A
VAL
19
1
1
18
A
ALA
32
A
ALA
22
HELX_P
A
LYS
48
A
LYS
38
1
2
17
A
SER
55
A
SER
45
HELX_P
A
LYS
61
A
LYS
51
1
3
7
A
GLY
66
A
GLY
56
HELX_P
A
GLY
80
A
GLY
70
1
4
15
A
LEU
82
A
LEU
72
HELX_P
A
ASP
91
A
ASP
81
1
5
10
A
ASP
91
A
ASP
81
HELX_P
A
THR
101
A
THR
91
1
6
11
A
GLY
107
A
GLY
97
HELX_P
A
GLU
117
A
GLU
107
1
7
11
A
THR
121
A
THR
111
HELX_P
A
LYS
127
A
LYS
117
1
8
7
A
ASN
128
A
ASN
118
HELX_P
A
LEU
132
A
LEU
122
5
9
5
A
ASN
133
A
ASN
123
HELX_P
A
TYR
142
A
TYR
132
1
10
10
A
TYR
142
A
TYR
132
HELX_P
A
GLU
147
A
GLU
137
1
11
6
A
ARG
152
A
ARG
142
HELX_P
A
ASP
170
A
ASP
160
1
12
19
A
CYS
178
A
CYS
168
HELX_P
A
ARG
183
A
ARG
173
1
13
6
A
LEU
210
A
LEU
200
HELX_P
A
VAL
221
A
VAL
211
1
14
12
A
PRO
261
A
PRO
251
HELX_P
A
ASP
263
A
ASP
253
5
15
3
A
GLN
264
A
GLN
254
HELX_P
A
GLY
274
A
GLY
264
1
16
11
A
SER
275
A
SER
265
HELX_P
A
LYS
289
A
LYS
279
1
17
15
A
SER
315
A
SER
305
HELX_P
A
ILE
323
A
ILE
313
1
18
9
A
GLU
329
A
GLU
319
HELX_P
A
ARG
333
A
ARG
323
5
19
5
covale
1.623
both
T
DC
5
B
O3'
DC
5
1_555
T
BGM
6
B
P
BGM
6
1_555
covale
1.613
both
T
BGM
6
B
O3'
BGM
6
1_555
T
DT
7
B
P
DT
7
1_555
metalc
2.284
A
LYS
60
A
O
LYS
50
1_555
A
NA
402
F
NA
NA
1_555
metalc
2.690
A
LEU
62
A
O
LEU
52
1_555
A
NA
402
F
NA
NA
1_555
metalc
2.366
A
VAL
65
A
O
VAL
55
1_555
A
NA
402
F
NA
NA
1_555
metalc
2.262
A
THR
101
A
O
THR
91
1_555
A
NA
401
E
NA
NA
1_555
metalc
2.296
A
VAL
103
A
O
VAL
93
1_555
A
NA
401
E
NA
NA
1_555
metalc
2.292
A
ILE
106
A
O
ILE
96
1_555
A
NA
401
E
NA
NA
1_555
metalc
2.341
A
NA
401
E
NA
NA
1_555
P
DG
9
C
OP1
DG
9
1_555
metalc
2.542
A
NA
401
E
NA
NA
1_555
P
HOH
101
I
O
HOH
1_555
metalc
2.621
A
NA
402
F
NA
NA
1_555
D
DC
3
D
OP1
DC
3
1_555
hydrog
WATSON-CRICK
T
DC
1
B
N3
DC
1
1_555
D
DG
5
D
N1
DG
5
1_555
hydrog
WATSON-CRICK
T
DC
1
B
N4
DC
1
1_555
D
DG
5
D
O6
DG
5
1_555
hydrog
WATSON-CRICK
T
DC
1
B
O2
DC
1
1_555
D
DG
5
D
N2
DG
5
1_555
hydrog
WATSON-CRICK
T
DC
2
B
N3
DC
2
1_555
D
DG
4
D
N1
DG
4
1_555
hydrog
WATSON-CRICK
T
DC
2
B
N4
DC
2
1_555
D
DG
4
D
O6
DG
4
1_555
hydrog
WATSON-CRICK
T
DC
2
B
O2
DC
2
1_555
D
DG
4
D
N2
DG
4
1_555
hydrog
WATSON-CRICK
T
DG
3
B
N1
DG
3
1_555
D
DC
3
D
N3
DC
3
1_555
hydrog
WATSON-CRICK
T
DG
3
B
N2
DG
3
1_555
D
DC
3
D
O2
DC
3
1_555
hydrog
WATSON-CRICK
T
DG
3
B
O6
DG
3
1_555
D
DC
3
D
N4
DC
3
1_555
hydrog
WATSON-CRICK
T
DA
4
B
N1
DA
4
1_555
D
DT
2
D
N3
DT
2
1_555
hydrog
WATSON-CRICK
T
DA
4
B
N6
DA
4
1_555
D
DT
2
D
O4
DT
2
1_555
hydrog
WATSON-CRICK
T
DC
5
B
N3
DC
5
1_555
D
DG
1
D
N1
DG
1
1_555
hydrog
WATSON-CRICK
T
DC
5
B
N4
DC
5
1_555
D
DG
1
D
O6
DG
1
1_555
hydrog
WATSON-CRICK
T
DC
5
B
O2
DC
5
1_555
D
DG
1
D
N2
DG
1
1_555
hydrog
WATSON-CRICK
T
DT
7
B
N3
DT
7
1_555
P
DA
10
C
N1
DA
10
1_555
hydrog
WATSON-CRICK
T
DT
7
B
O4
DT
7
1_555
P
DA
10
C
N6
DA
10
1_555
hydrog
WATSON-CRICK
T
DC
8
B
N3
DC
8
1_555
P
DG
9
C
N1
DG
9
1_555
hydrog
WATSON-CRICK
T
DC
8
B
N4
DC
8
1_555
P
DG
9
C
O6
DG
9
1_555
hydrog
WATSON-CRICK
T
DC
8
B
O2
DC
8
1_555
P
DG
9
C
N2
DG
9
1_555
hydrog
WATSON-CRICK
T
DG
9
B
N1
DG
9
1_555
P
DC
8
C
N3
DC
8
1_555
hydrog
WATSON-CRICK
T
DG
9
B
N2
DG
9
1_555
P
DC
8
C
O2
DC
8
1_555
hydrog
WATSON-CRICK
T
DG
9
B
O6
DG
9
1_555
P
DC
8
C
N4
DC
8
1_555
hydrog
WATSON-CRICK
T
DC
10
B
N3
DC
10
1_555
P
DG
7
C
N1
DG
7
1_555
hydrog
WATSON-CRICK
T
DC
10
B
N4
DC
10
1_555
P
DG
7
C
O6
DG
7
1_555
hydrog
WATSON-CRICK
T
DC
10
B
O2
DC
10
1_555
P
DG
7
C
N2
DG
7
1_555
hydrog
WATSON-CRICK
T
DA
11
B
N1
DA
11
1_555
P
DT
6
C
N3
DT
6
1_555
hydrog
WATSON-CRICK
T
DA
11
B
N6
DA
11
1_555
P
DT
6
C
O4
DT
6
1_555
hydrog
WATSON-CRICK
T
DT
12
B
N3
DT
12
1_555
P
DA
5
C
N1
DA
5
1_555
hydrog
WATSON-CRICK
T
DT
12
B
O4
DT
12
1_555
P
DA
5
C
N6
DA
5
1_555
hydrog
WATSON-CRICK
T
DC
13
B
N3
DC
13
1_555
P
DG
4
C
N1
DG
4
1_555
hydrog
WATSON-CRICK
T
DC
13
B
N4
DC
13
1_555
P
DG
4
C
O6
DG
4
1_555
hydrog
WATSON-CRICK
T
DC
13
B
O2
DC
13
1_555
P
DG
4
C
N2
DG
4
1_555
hydrog
WATSON-CRICK
T
DA
14
B
N1
DA
14
1_555
P
DT
3
C
N3
DT
3
1_555
hydrog
WATSON-CRICK
T
DA
14
B
N6
DA
14
1_555
P
DT
3
C
O4
DT
3
1_555
hydrog
WATSON-CRICK
T
DG
15
B
N1
DG
15
1_555
P
DC
2
C
N3
DC
2
1_555
hydrog
WATSON-CRICK
T
DG
15
B
N2
DG
15
1_555
P
DC
2
C
O2
DC
2
1_555
hydrog
WATSON-CRICK
T
DG
15
B
O6
DG
15
1_555
P
DC
2
C
N4
DC
2
1_555
hydrog
WATSON-CRICK
T
DC
16
B
N3
DC
16
1_555
P
DG
1
C
N1
DG
1
1_555
hydrog
WATSON-CRICK
T
DC
16
B
N4
DC
16
1_555
P
DG
1
C
O6
DG
1
1_555
hydrog
WATSON-CRICK
T
DC
16
B
O2
DC
16
1_555
P
DG
1
C
N2
DG
1
1_555
TRANSFERASE/DNA
promutagenic 8-halogenated G insertion, polymerase -DNA complex, base excision repair, TRANSFERASE-DNA complex
A
GLY
274
A
GLY
264
1
A
SER
275
A
SER
265
-8.48
DPOLB_HUMAN
UNP
1
11
P06746
LNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQ
DDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVD
SEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEY
PHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREP
KDRSE
4M2Y
PDB
2
4M2Y
CCGACGTCGCATCAGC
4M2Y
PDB
3
4M2Y
GCTGATGCGA
4M2Y
PDB
4
4M2Y
GTCGG
11
335
4M2Y
11
335
P06746
A
1
1
325
1
16
4M2Y
1
16
4M2Y
T
2
1
16
1
10
4M2Y
1
10
4M2Y
P
3
1
10
1
5
4M2Y
1
5
4M2Y
D
4
1
5
2
5
2
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
150
A
ILE
140
A
PRO
151
A
PRO
141
A
SER
187
A
SER
177
A
SER
188
A
SER
178
A
ILE
174
A
ILE
164
A
VAL
177
A
VAL
167
A
MET
191
A
MET
181
A
THR
196
A
THR
186
A
ARG
253
A
ARG
243
A
LEU
259
A
LEU
249
A
LYS
234
A
LYS
224
A
CYS
239
A
CYS
229
A
ILE
224
A
ILE
214
A
LYS
230
A
LYS
220
A
PHE
291
A
PHE
281
A
ILE
293
A
ILE
283
A
ILE
298
A
ILE
288
A
PRO
300
A
PRO
290
BINDING SITE FOR RESIDUE NA A 401
A
NA
401
Software
5
BINDING SITE FOR RESIDUE NA A 402
A
NA
402
Software
4
A
THR
101
A
THR
91
5
1_555
A
VAL
103
A
VAL
93
5
1_555
A
ILE
106
A
ILE
96
5
1_555
P
DG
9
C
DG
9
5
1_555
P
HOH
101
I
HOH
5
1_555
A
LYS
60
A
LYS
50
4
1_555
A
LEU
62
A
LEU
52
4
1_555
A
VAL
65
A
VAL
55
4
1_555
D
DC
3
D
DC
3
4
1_555
4
P 1 21 1