0.015509
0.000000
0.000000
0.000000
0.009632
0.000000
0.000000
0.000000
0.008245
0.00000
0.00000
0.00000
Yu, Y.
Zhou, M.Z.
Gu, J.K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
64.479
103.820
121.285
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Co 2
58.933
COBALT (II) ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H14 O2
118.174
HEXANE-1,6-DIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CO
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
O
N
139
N
C
N
140
N
C
N
141
N
C
N
142
N
C
N
143
N
C
N
144
N
C
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
S
C
N
162
N
C
N
163
N
O
N
164
N
C
Y
165
N
C
Y
166
N
N
Y
167
N
C
Y
168
N
C
Y
169
N
N
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
O
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
S
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
N
N
229
S
C
N
230
N
C
N
231
N
O
N
232
N
C
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
N
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
N
258
N
C
N
259
N
S
N
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
Y
281
N
C
Y
282
N
C
Y
283
N
C
N
284
N
O
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
N
N
297
S
C
N
298
N
C
N
299
N
O
N
300
N
C
N
301
N
C
N
302
N
C
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
N
N
314
S
C
N
315
N
C
N
316
N
O
N
317
N
C
N
318
N
O
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
R
C
N
332
N
O
N
333
N
C
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
N
N
345
S
C
N
346
N
C
N
347
N
O
N
348
N
C
Y
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
N
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
N
N
372
S
C
N
373
N
C
N
374
N
O
N
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
N
382
N
O
N
383
N
O
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
N
N
396
S
C
N
397
N
C
N
398
N
O
N
399
N
C
N
400
N
C
N
401
N
C
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
Y
161
N
sing
Y
162
N
doub
Y
163
N
doub
N
164
N
sing
Y
165
N
sing
N
166
N
sing
Y
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
doub
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
doub
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
Y
269
N
doub
Y
270
N
sing
Y
271
N
sing
N
272
N
sing
Y
273
N
doub
N
274
N
sing
Y
275
N
doub
N
276
N
sing
Y
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
Y
338
N
doub
Y
339
N
sing
Y
340
N
sing
N
341
N
sing
Y
342
N
doub
Y
343
N
sing
Y
344
N
sing
N
345
N
sing
Y
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
Y
366
N
doub
Y
367
N
sing
Y
368
N
sing
N
369
N
sing
Y
370
N
doub
N
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
doub
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
CN
Cell Res.
1001-0602
24
267
277
10.1038/cr.2013.172
24366337
Planar substrate-binding site dictates the specificity of ECF-type nickel/cobalt transporters
2014
10.2210/pdb4m5c/pdb
pdb_00004m5c
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2013-06-03
ADSC QUANTUM 315r
Si 111 CHANNEL
SINGLE WAVELENGTH
M
x-ray
1
1.589
1.0
BL17U
SSRF
1.589
SYNCHROTRON
SSRF BEAMLINE BL17U
22765.900
Cobalamin biosynthesis protein CbiM
UNP residues 1-209
1
man
polymer
58.933
COBALT (II) ION
1
syn
non-polymer
118.174
HEXANE-1,6-DIOL
5
syn
non-polymer
18.015
water
41
nat
water
TtNikM2
no
no
MHIPEGYLSPQTCAVMGAAMVPVLTVAAKKVNKSFDKKDVPAMAIGSAFAFTIMMFNVPIPGGTTAHAIGATLLATTLGP
WAASISLTLALFIQALLFGDGGILALGANSFNMAFIAPFVGYGIYRLMLSLKLNKVLSSAIGGYVGINAAALATAIELGL
QPLLFHTANGTPLYFPYGLNVAIPAMMFAHLTVAGIVEAVITGLVVYYLLEHHHHHH
MHIPEGYLSPQTCAVMGAAMVPVLTVAAKKVNKSFDKKDVPAMAIGSAFAFTIMMFNVPIPGGTTAHAIGATLLATTLGP
WAASISLTLALFIQALLFGDGGILALGANSFNMAFIAPFVGYGIYRLMLSLKLNKVLSSAIGGYVGINAAALATAIELGL
QPLLFHTANGTPLYFPYGLNVAIPAMMFAHLTVAGIVEAVITGLVVYYLLEHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
MB4
sample
CbiM2, TTE1695
273068
Thermoanaerobacter tengcongensis
562
Escherichia coli
plasmid
1
4.46
72.41
VAPOR DIFFUSION, HANGING DROP
9.8
30% PEG 400, 0.05M CAPSO, 0.05M magnesium acetate,, pH 9.8, VAPOR DIFFUSION, HANGING DROP, temperature 291.15K
291.15
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
1
0
2014-03-26
1
1
2024-03-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
PDBJ
2013-08-08
REL
REL
CO
COBALT (II) ION
HEZ
HEXANE-1,6-DIOL
HOH
water
CO
1
2
CO
CO
301
A
HEZ
1
3
HEZ
HEZ
302
A
HEZ
1
3
HEZ
HEZ
303
A
HEZ
1
3
HEZ
HEZ
304
A
HEZ
1
3
HEZ
HEZ
305
A
HEZ
1
3
HEZ
HEZ
306
A
HOH
1
4
HOH
HOH
401
A
HOH
2
4
HOH
HOH
402
A
HOH
3
4
HOH
HOH
403
A
HOH
4
4
HOH
HOH
404
A
HOH
5
4
HOH
HOH
405
A
HOH
6
4
HOH
HOH
406
A
HOH
7
4
HOH
HOH
407
A
HOH
8
4
HOH
HOH
408
A
HOH
9
4
HOH
HOH
409
A
HOH
10
4
HOH
HOH
410
A
HOH
11
4
HOH
HOH
411
A
HOH
12
4
HOH
HOH
412
A
HOH
13
4
HOH
HOH
413
A
HOH
14
4
HOH
HOH
414
A
HOH
15
4
HOH
HOH
415
A
HOH
16
4
HOH
HOH
416
A
HOH
17
4
HOH
HOH
417
A
HOH
18
4
HOH
HOH
418
A
HOH
19
4
HOH
HOH
419
A
HOH
20
4
HOH
HOH
420
A
HOH
21
4
HOH
HOH
421
A
HOH
22
4
HOH
HOH
422
A
HOH
23
4
HOH
HOH
423
A
HOH
24
4
HOH
HOH
424
A
HOH
25
4
HOH
HOH
425
A
HOH
26
4
HOH
HOH
426
A
HOH
27
4
HOH
HOH
427
A
HOH
28
4
HOH
HOH
428
A
HOH
29
4
HOH
HOH
429
A
HOH
30
4
HOH
HOH
430
A
HOH
31
4
HOH
HOH
431
A
HOH
32
4
HOH
HOH
432
A
HOH
33
4
HOH
HOH
433
A
HOH
34
4
HOH
HOH
434
A
HOH
35
4
HOH
HOH
435
A
HOH
36
4
HOH
HOH
436
A
HOH
37
4
HOH
HOH
437
A
HOH
38
4
HOH
HOH
438
A
HOH
39
4
HOH
HOH
439
A
HOH
40
4
HOH
HOH
440
A
HOH
41
4
HOH
HOH
441
A
MET
1
n
1
MET
1
A
HIS
2
n
2
HIS
2
A
ILE
3
n
3
ILE
3
A
PRO
4
n
4
PRO
4
A
GLU
5
n
5
GLU
5
A
GLY
6
n
6
GLY
6
A
TYR
7
n
7
TYR
7
A
LEU
8
n
8
LEU
8
A
SER
9
n
9
SER
9
A
PRO
10
n
10
PRO
10
A
GLN
11
n
11
GLN
11
A
THR
12
n
12
THR
12
A
CYS
13
n
13
CYS
13
A
ALA
14
n
14
ALA
14
A
VAL
15
n
15
VAL
15
A
MET
16
n
16
MET
16
A
GLY
17
n
17
GLY
17
A
ALA
18
n
18
ALA
18
A
ALA
19
n
19
ALA
19
A
MET
20
n
20
MET
20
A
VAL
21
n
21
VAL
21
A
PRO
22
n
22
PRO
22
A
VAL
23
n
23
VAL
23
A
LEU
24
n
24
LEU
24
A
THR
25
n
25
THR
25
A
VAL
26
n
26
VAL
26
A
ALA
27
n
27
ALA
27
A
ALA
28
n
28
ALA
28
A
LYS
29
n
29
LYS
29
A
LYS
30
n
30
LYS
30
A
VAL
31
n
31
VAL
31
A
ASN
32
n
32
ASN
32
A
LYS
33
n
33
LYS
33
A
SER
34
n
34
SER
34
A
PHE
35
n
35
PHE
35
A
ASP
36
n
36
ASP
36
A
LYS
37
n
37
LYS
37
A
LYS
38
n
38
LYS
38
A
ASP
39
n
39
ASP
39
A
VAL
40
n
40
VAL
40
A
PRO
41
n
41
PRO
41
A
ALA
42
n
42
ALA
42
A
MET
43
n
43
MET
43
A
ALA
44
n
44
ALA
44
A
ILE
45
n
45
ILE
45
A
GLY
46
n
46
GLY
46
A
SER
47
n
47
SER
47
A
ALA
48
n
48
ALA
48
A
PHE
49
n
49
PHE
49
A
ALA
50
n
50
ALA
50
A
PHE
51
n
51
PHE
51
A
THR
52
n
52
THR
52
A
ILE
53
n
53
ILE
53
A
MET
54
n
54
MET
54
A
MET
55
n
55
MET
55
A
PHE
56
n
56
PHE
56
A
ASN
57
n
57
ASN
57
A
VAL
58
n
58
VAL
58
A
PRO
59
n
59
PRO
59
A
ILE
60
n
60
ILE
60
A
PRO
61
n
61
PRO
61
A
GLY
62
n
62
GLY
62
A
GLY
63
n
63
GLY
63
A
THR
64
n
64
THR
64
A
THR
65
n
65
THR
65
A
ALA
66
n
66
ALA
66
A
HIS
67
n
67
HIS
67
A
ALA
68
n
68
ALA
68
A
ILE
69
n
69
ILE
69
A
GLY
70
n
70
GLY
70
A
ALA
71
n
71
ALA
71
A
THR
72
n
72
THR
72
A
LEU
73
n
73
LEU
73
A
LEU
74
n
74
LEU
74
A
ALA
75
n
75
ALA
75
A
THR
76
n
76
THR
76
A
THR
77
n
77
THR
77
A
LEU
78
n
78
LEU
78
A
GLY
79
n
79
GLY
79
A
PRO
80
n
80
PRO
80
A
TRP
81
n
81
TRP
81
A
ALA
82
n
82
ALA
82
A
ALA
83
n
83
ALA
83
A
SER
84
n
84
SER
84
A
ILE
85
n
85
ILE
85
A
SER
86
n
86
SER
86
A
LEU
87
n
87
LEU
87
A
THR
88
n
88
THR
88
A
LEU
89
n
89
LEU
89
A
ALA
90
n
90
ALA
90
A
LEU
91
n
91
LEU
91
A
PHE
92
n
92
PHE
92
A
ILE
93
n
93
ILE
93
A
GLN
94
n
94
GLN
94
A
ALA
95
n
95
ALA
95
A
LEU
96
n
96
LEU
96
A
LEU
97
n
97
LEU
97
A
PHE
98
n
98
PHE
98
A
GLY
99
n
99
GLY
99
A
ASP
100
n
100
ASP
100
A
GLY
101
n
101
GLY
101
A
GLY
102
n
102
GLY
102
A
ILE
103
n
103
ILE
103
A
LEU
104
n
104
LEU
104
A
ALA
105
n
105
ALA
105
A
LEU
106
n
106
LEU
106
A
GLY
107
n
107
GLY
107
A
ALA
108
n
108
ALA
108
A
ASN
109
n
109
ASN
109
A
SER
110
n
110
SER
110
A
PHE
111
n
111
PHE
111
A
ASN
112
n
112
ASN
112
A
MET
113
n
113
MET
113
A
ALA
114
n
114
ALA
114
A
PHE
115
n
115
PHE
115
A
ILE
116
n
116
ILE
116
A
ALA
117
n
117
ALA
117
A
PRO
118
n
118
PRO
118
A
PHE
119
n
119
PHE
119
A
VAL
120
n
120
VAL
120
A
GLY
121
n
121
GLY
121
A
TYR
122
n
122
TYR
122
A
GLY
123
n
123
GLY
123
A
ILE
124
n
124
ILE
124
A
TYR
125
n
125
TYR
125
A
ARG
126
n
126
ARG
126
A
LEU
127
n
127
LEU
127
A
MET
128
n
128
MET
128
A
LEU
129
n
129
LEU
129
A
SER
130
n
130
SER
130
A
LEU
131
n
131
LEU
131
A
LYS
132
n
132
LYS
132
A
LEU
133
n
133
LEU
133
A
ASN
134
n
134
ASN
134
A
LYS
135
n
135
LYS
135
A
VAL
136
n
136
VAL
136
A
LEU
137
n
137
LEU
137
A
SER
138
n
138
SER
138
A
SER
139
n
139
SER
139
A
ALA
140
n
140
ALA
140
A
ILE
141
n
141
ILE
141
A
GLY
142
n
142
GLY
142
A
GLY
143
n
143
GLY
143
A
TYR
144
n
144
TYR
144
A
VAL
145
n
145
VAL
145
A
GLY
146
n
146
GLY
146
A
ILE
147
n
147
ILE
147
A
ASN
148
n
148
ASN
148
A
ALA
149
n
149
ALA
149
A
ALA
150
n
150
ALA
150
A
ALA
151
n
151
ALA
151
A
LEU
152
n
152
LEU
152
A
ALA
153
n
153
ALA
153
A
THR
154
n
154
THR
154
A
ALA
155
n
155
ALA
155
A
ILE
156
n
156
ILE
156
A
GLU
157
n
157
GLU
157
A
LEU
158
n
158
LEU
158
A
GLY
159
n
159
GLY
159
A
LEU
160
n
160
LEU
160
A
GLN
161
n
161
GLN
161
A
PRO
162
n
162
PRO
162
A
LEU
163
n
163
LEU
163
A
LEU
164
n
164
LEU
164
A
PHE
165
n
165
PHE
165
A
HIS
166
n
166
HIS
166
A
THR
167
n
167
THR
167
A
ALA
168
n
168
ALA
168
A
ASN
169
n
169
ASN
169
A
GLY
170
n
170
GLY
170
A
THR
171
n
171
THR
171
A
PRO
172
n
172
PRO
172
A
LEU
173
n
173
LEU
173
A
TYR
174
n
174
TYR
174
A
PHE
175
n
175
PHE
175
A
PRO
176
n
176
PRO
176
A
TYR
177
n
177
TYR
177
A
GLY
178
n
178
GLY
178
A
LEU
179
n
179
LEU
179
A
ASN
180
n
180
ASN
180
A
VAL
181
n
181
VAL
181
A
ALA
182
n
182
ALA
182
A
ILE
183
n
183
ILE
183
A
PRO
184
n
184
PRO
184
A
ALA
185
n
185
ALA
185
A
MET
186
n
186
MET
186
A
MET
187
n
187
MET
187
A
PHE
188
n
188
PHE
188
A
ALA
189
n
189
ALA
189
A
HIS
190
n
190
HIS
190
A
LEU
191
n
191
LEU
191
A
THR
192
n
192
THR
192
A
VAL
193
n
193
VAL
193
A
ALA
194
n
194
ALA
194
A
GLY
195
n
195
GLY
195
A
ILE
196
n
196
ILE
196
A
VAL
197
n
197
VAL
197
A
GLU
198
n
198
GLU
198
A
ALA
199
n
199
ALA
199
A
VAL
200
n
200
VAL
200
A
ILE
201
n
201
ILE
201
A
THR
202
n
202
THR
202
A
GLY
203
n
203
GLY
203
A
LEU
204
n
204
LEU
204
A
VAL
205
n
205
VAL
205
A
VAL
206
n
206
VAL
206
A
TYR
207
n
207
TYR
207
A
TYR
208
n
208
TYR
208
A
LEU
209
n
209
LEU
209
A
ALA
210
n
210
LEU
210
A
ALA
211
n
211
GLU
211
A
HIS
212
n
212
HIS
212
A
ALA
213
n
213
HIS
213
A
ALA
214
n
214
HIS
214
A
n
215
215
A
n
216
216
A
n
217
217
A
author_and_software_defined_assembly
PISA
1
monomeric
A
MET
1
A
N
MET
1
1_555
A
CO
301
B
CO
CO
1_555
A
HIS
2
A
N
HIS
2
1_555
76.2
A
MET
1
A
N
MET
1
1_555
A
CO
301
B
CO
CO
1_555
A
HIS
2
A
ND1
HIS
2
1_555
177.4
A
HIS
2
A
N
HIS
2
1_555
A
CO
301
B
CO
CO
1_555
A
HIS
2
A
ND1
HIS
2
1_555
101.3
A
MET
1
A
N
MET
1
1_555
A
CO
301
B
CO
CO
1_555
A
HIS
67
A
NE2
HIS
67
1_555
98.4
A
HIS
2
A
N
HIS
2
1_555
A
CO
301
B
CO
CO
1_555
A
HIS
67
A
NE2
HIS
67
1_555
173.2
A
HIS
2
A
ND1
HIS
2
1_555
A
CO
301
B
CO
CO
1_555
A
HIS
67
A
NE2
HIS
67
1_555
84.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
58
A
N
VAL
58
A
O
ALA
66
A
O
ALA
66
1
A
CG
HIS
213
A
CG
HIS
213
1
Y
1
A
ND1
HIS
213
A
ND1
HIS
213
1
Y
1
A
CD2
HIS
213
A
CD2
HIS
213
1
Y
1
A
CE1
HIS
213
A
CE1
HIS
213
1
Y
1
A
NE2
HIS
213
A
NE2
HIS
213
1
Y
1
A
CG
HIS
214
A
CG
HIS
214
1
Y
1
A
ND1
HIS
214
A
ND1
HIS
214
1
Y
1
A
CD2
HIS
214
A
CD2
HIS
214
1
Y
1
A
CE1
HIS
214
A
CE1
HIS
214
1
Y
1
A
NE2
HIS
214
A
NE2
HIS
214
1
Y
1
A
HIS
215
A
HIS
215
1
Y
1
A
HIS
216
A
HIS
216
1
Y
1
A
HIS
217
A
HIS
217
1
Y
1
A
A
O
O
HOH
HOH
404
417
2.03
1
A
A
O
O
HIS
HOH
2
432
2.16
1
A
LYS
37
-32.64
-38.17
1
A
THR
64
-111.73
-94.54
1
A
PHE
115
-127.61
-68.31
1
A
TYR
174
-141.07
-132.18
1
A
VAL
193
-131.98
-61.09
1
A
HIS
212
53.38
4.52
1
A
HIS
213
-155.23
-86.40
93.440
27.0563
7.440
SF FILE CONTAINS FRIEDEL PAIRS UNDER UNDER I_PLUS/MINUS AND F_PLUS/MINUS COLUMNS.
0.2410
0.2014
0.2034
2.50
47.723
721
14466
14394
5.01
99.34
1.000
0.090
0.8401
0.30
1
1.36
MOLECULAR REPLACEMENT
22.6500
0.90
1.11
ML
FLAT BULK SOLVENT MODEL
2.50
47.723
41
1644
41
0
1562
0.007
1677
1.063
2285
13.403
594
0.067
278
0.006
278
0.2696
0.2108
2.6902
150
2642
2792
5
98.0000
0.2610
0.1962
2.9609
137
2708
2845
5
100.0000
0.2179
0.1884
3.3893
161
2720
2881
5
100.0000
0.2558
0.1874
4.2697
136
2733
2869
5
100.0000
0.2286
0.2165
47.7314
137
2870
3007
5
99.0000
2.5
50
4M5C
27318
27181
1
1
1
99.5
2.5
1
data collection
CBASS
phasing
PHASES
refinement
PHENIX
(phenix.refine: 1.8_1069)
data reduction
HKL-2000
data scaling
HKL-2000
Crystal Structure of an Truncated Transition metal Transporter
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
A
SER
9
A
SER
9
HELX_P
A
PHE
35
A
PHE
35
1
1
27
A
ASP
36
A
ASP
36
HELX_P
A
LYS
38
A
LYS
38
5
2
3
A
ASP
39
A
ASP
39
HELX_P
A
MET
55
A
MET
55
1
3
17
A
GLY
70
A
GLY
70
HELX_P
A
GLY
79
A
GLY
79
1
4
10
A
GLY
79
A
GLY
79
HELX_P
A
GLY
99
A
GLY
99
1
5
21
A
ALA
105
A
ALA
105
HELX_P
A
ALA
114
A
ALA
114
1
6
10
A
PHE
115
A
PHE
115
HELX_P
A
LEU
131
A
LEU
131
1
7
17
A
ASN
134
A
ASN
134
HELX_P
A
PHE
165
A
PHE
165
1
8
32
A
GLY
178
A
GLY
178
HELX_P
A
VAL
193
A
VAL
193
1
9
16
A
VAL
193
A
VAL
193
HELX_P
A
GLU
211
A
GLU
211
1
10
19
metalc
2.303
A
MET
1
A
N
MET
1
1_555
A
CO
301
B
CO
CO
1_555
metalc
2.134
A
HIS
2
A
N
HIS
2
1_555
A
CO
301
B
CO
CO
1_555
metalc
2.258
A
HIS
2
A
ND1
HIS
2
1_555
A
CO
301
B
CO
CO
1_555
metalc
2.278
A
HIS
67
A
NE2
HIS
67
1_555
A
CO
301
B
CO
CO
1_555
MEMBRANE PROTEIN
membrane protein, transporter, Cobalt
Q8R9C0_THETN
UNP
1
1
Q8R9C0
MHIPEGYLSPQTCAVMGAAMVPVLTVAAKKVNKSFDKKDVPAMAIGSAFAFTIMMFNVPIPGGTTAHAIGATLLATTLGP
WAASISLTLALFIQALLFGDGGILALGANSFNMAFIAPFVGYGIYRLMLSLKLNKVLSSAIGGYVGINAAALATAIELGL
QPLLFHTANGTPLYFPYGLNVAIPAMMFAHLTVAGIVEAVITGLVVYYL
1
209
4M5C
1
209
Q8R9C0
A
1
1
209
1
expression tag
LEU
210
4M5C
A
Q8R9C0
UNP
210
1
expression tag
GLU
211
4M5C
A
Q8R9C0
UNP
211
1
expression tag
HIS
212
4M5C
A
Q8R9C0
UNP
212
1
expression tag
HIS
213
4M5C
A
Q8R9C0
UNP
213
1
expression tag
HIS
214
4M5C
A
Q8R9C0
UNP
214
1
expression tag
HIS
215
4M5C
A
Q8R9C0
UNP
215
1
expression tag
HIS
216
4M5C
A
Q8R9C0
UNP
216
1
expression tag
HIS
217
4M5C
A
Q8R9C0
UNP
217
2
anti-parallel
A
VAL
58
A
VAL
58
A
PRO
59
A
PRO
59
A
THR
65
A
THR
65
A
ALA
66
A
ALA
66
BINDING SITE FOR RESIDUE CO A 301
A
CO
301
Software
4
BINDING SITE FOR RESIDUE HEZ A 302
A
HEZ
302
Software
1
BINDING SITE FOR RESIDUE HEZ A 304
A
HEZ
304
Software
1
BINDING SITE FOR RESIDUE HEZ A 305
A
HEZ
305
Software
6
BINDING SITE FOR RESIDUE HEZ A 306
A
HEZ
306
Software
2
A
MET
1
A
MET
1
4
1_555
A
HIS
2
A
HIS
2
4
1_555
A
THR
65
A
THR
65
4
1_555
A
HIS
67
A
HIS
67
4
1_555
A
LEU
204
A
LEU
204
1
1_555
A
HOH
408
H
HOH
1
1_555
A
LYS
37
A
LYS
37
6
4_575
A
LYS
38
A
LYS
38
6
4_575
A
ALA
95
A
ALA
95
6
1_555
A
LEU
96
A
LEU
96
6
1_555
A
PHE
98
A
PHE
98
6
1_555
A
HOH
424
H
HOH
6
1_555
A
TYR
7
A
TYR
7
2
1_555
A
TYR
177
A
TYR
177
2
1_555
20
C 2 2 21