0.018533 0.000000 0.000000 0.000000 0.006862 0.000000 0.000000 0.000000 0.021333 0.00000 0.00000 0.00000 Singh, I. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 53.957 145.722 46.876 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C2 H6 O2 62.068 1,2-ETHANEDIOL ETHYLENE GLYCOL non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C10 H17 N2 O8 P 324.224 [(2R,3S,5R)-3-HYDROXY-5-[(5S)-5-METHYL-2,4-DIOXO-1,3-DIAZINAN-1-YL]OXOLAN-2-YL]METHYL DIHYDROGEN PHOSPHATE DNA linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N C N 232 N O N 233 N C N 234 N O N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N N N 242 S C N 243 N C N 244 N O N 245 N C N 246 N C N 247 N C N 248 N O N 249 N N N 250 N O N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N N N 262 S C N 263 N C N 264 N O N 265 N C N 266 N C N 267 N C N 268 N O N 269 N O N 270 N O N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 N C N 282 N C N 283 N O N 284 N O N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C Y 295 N C Y 296 N N Y 297 N C Y 298 N C Y 299 N N N 300 N O N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N O N 312 N H N 313 N H N 314 N N N 315 S C N 316 N C N 317 N O N 318 S C N 319 N C N 320 N C N 321 N C N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N N N 337 S C N 338 N C N 339 N O N 340 N C N 341 N C N 342 N C N 343 N C N 344 N O N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C N 363 N C N 364 N C N 365 N C N 366 N N N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N N N 384 S C N 385 N C N 386 N O N 387 N C N 388 N C N 389 N S N 390 N C N 391 N O N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N N N 404 S C N 405 N C N 406 N O N 407 N C Y 408 N C Y 409 N C Y 410 N C Y 411 N C Y 412 N C Y 413 N C N 414 N O N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N N N 427 S C N 428 N C N 429 N O N 430 N C N 431 N C N 432 N C N 433 N O N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N P N 444 N O N 445 N O N 446 N O N 447 N C N 448 R C N 449 N O N 450 S C N 451 N O N 452 N C N 453 R C N 454 N N N 455 N C N 456 N O N 457 N N N 458 N C N 459 N O N 460 S C N 461 N C N 462 N C N 463 N O N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N N N 482 S C N 483 N C N 484 N O N 485 N C N 486 N O N 487 N O N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N N N 496 S C N 497 N C N 498 N O N 499 R C N 500 N O N 501 N C N 502 N O N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N N N 513 S C N 514 N C N 515 N O N 516 N C Y 517 N C Y 518 N C Y 519 N C Y 520 N N Y 521 N C Y 522 N C Y 523 N C Y 524 N C Y 525 N C N 526 N O N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N H N 535 N H N 536 N H N 537 N H N 538 N H N 539 N N N 540 S C N 541 N C N 542 N O N 543 N C Y 544 N C Y 545 N C Y 546 N C Y 547 N C Y 548 N C Y 549 N C N 550 N O N 551 N O N 552 N H N 553 N H N 554 N H N 555 N H N 556 N H N 557 N H N 558 N H N 559 N H N 560 N H N 561 N H N 562 N H N 563 N N N 564 S C N 565 N C N 566 N O N 567 N C N 568 N C N 569 N C N 570 N O N 571 N H N 572 N H N 573 N H N 574 N H N 575 N H N 576 N H N 577 N H N 578 N H N 579 N H N 580 N H N 581 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N doub N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N doub N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N doub N 294 N sing N 295 N sing N 296 N sing N 297 N sing Y 298 N sing Y 299 N doub Y 300 N doub N 301 N sing Y 302 N sing N 303 N sing Y 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N doub N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N doub N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N doub N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N doub N 402 N sing N 403 N sing N 404 N sing N 405 N sing Y 406 N doub Y 407 N sing Y 408 N sing N 409 N sing Y 410 N doub N 411 N sing Y 412 N doub N 413 N sing Y 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N doub N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N doub N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N doub N 451 N sing N 452 N sing N 453 N doub N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N doub N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N doub N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N doub N 510 N sing N 511 N sing N 512 N sing N 513 N sing Y 514 N doub Y 515 N sing Y 516 N sing N 517 N sing Y 518 N doub Y 519 N sing Y 520 N sing N 521 N sing Y 522 N sing Y 523 N doub N 524 N sing Y 525 N doub N 526 N sing Y 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N sing N 537 N doub N 538 N sing N 539 N sing N 540 N sing N 541 N sing Y 542 N doub Y 543 N sing Y 544 N sing N 545 N sing Y 546 N doub N 547 N sing Y 548 N doub N 549 N sing Y 550 N sing N 551 N sing N 552 N sing N 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N sing N 558 N sing N 559 N sing N 560 N sing N 561 N doub N 562 N sing N 563 N sing N 564 N sing N 565 N sing N 566 N sing N 567 N sing N 568 N sing N 569 N sing N 570 N sing N 571 N sing N 572 N sing DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 70 752 759 10.1107/S1399004713032987 24598744 The structure of an authentic spore photoproduct lesion in DNA suggests a basis for recognition. 2014 10.2210/pdb4m94/pdb pdb_00004m94 100 1 CCD 2012-07-27 APEX II CCD GRAPHITE SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 SEALED TUBE OTHER 29347.754 Gag-Pol polyprotein 3.4.23.-, 2.7.7.49, 2.7.7.7, 3.1.26.4 UNP residues 683-937 1 man polymer 2403.620 5' d(ATCCGttA) 3' 1 syn polymer 2450.642 5' d(TAACGGAT) 3' 1 syn polymer 62.068 1,2-ETHANEDIOL 4 syn non-polymer 18.015 water 148 nat water Pr180gag-pol, Matrix protein p15, MA, RNA-binding phosphoprotein p12, pp12, Capsid protein p30, CA, Nucleocapsid protein p10, NC-pol, Protease p14, PR, Reverse transcriptase/ribonuclease H p80, RT, Integrase p46, IN no no GSHMTWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLL PVKKPGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGI SGQLTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKA QICQKQVKYLGYLLKEGQR GSHMTWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLL PVKKPGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGI SGQLTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKA QICQKQVKYLGYLLKEGQR A polypeptide(L) no yes (DA)(DT)(DC)(DC)(DG)(QBT)(DT)(DA) ATCCGXTA B polydeoxyribonucleotide no no (DT)(DA)(DA)(DC)(DG)(DG)(DA)(DT) TAACGGAT G polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n MoMLV sample gag-pol, reverse transcriptase 928306 Moloney murine leukemia virus isolate Shinnick 562 Escherichia coli plasmid pET15b 1 2.73 54.90 VAPOR DIFFUSION, HANGING DROP 6.5 7% PEG 4000, 5mM Magnesium acetate, 50mM N-(2-acetamido)iminodiacetic acid, pH 6.5, vapor diffusion, hanging drop, temperature 293.15K 293.15 -20.315 1 20 B 1 G 16 1.681 B_DA1:DT16_G 1 3.630 0.003 -0.324 -0.218 -4.550 1 20 B 2 G 15 4.850 B_DT2:DA15_G 2 -9.801 -0.119 0.184 -0.191 -3.256 1 19 B 3 G 14 -1.261 B_DC3:DG14_G 3 -12.521 0.128 0.030 -0.410 1.972 1 19 B 4 G 13 5.312 B_DC4:DG13_G 4 -5.385 0.612 -0.167 -0.411 -4.507 1 19 B 5 G 12 8.574 B_DG5:DC12_G 5 -10.923 -0.353 -0.117 -0.007 6.962 1 20 B 6 G 11 -1.146 B_QBT6:DA11_G 6 -23.869 -0.289 -0.151 -0.310 -14.929 1 20 B 7 G 10 -0.713 B_DT7:DA10_G 7 0.169 -0.402 0.675 -0.184 1.263 1 20 B 8 G 9 -1.097 B_DA8:DT9_G 8 -9.888 0.086 0.323 -0.292 2.692 28.015 B B 1 2 16.524 G G 16 15 3.059 7.861 0.541 -0.448 BB_DA1DT2:DA15DT16_GG 1 -4.502 9.463 26.538 -2.607 -2.080 3.094 36.611 B B 2 3 4.062 G G 15 14 3.152 2.548 -0.317 -0.362 BB_DT2DC3:DG14DA15_GG 2 2.444 -3.897 36.447 -0.912 0.825 3.023 35.095 B B 3 4 12.109 G G 14 13 3.116 7.244 -0.048 -0.076 BB_DC3DC4:DG13DG14_GG 3 2.959 -4.945 34.239 -1.157 0.502 3.380 34.639 B B 4 5 15.103 G G 13 12 3.370 8.896 0.361 0.525 BB_DC4DG5:DC12DG13_GG 4 -1.204 2.045 33.490 -0.555 -0.801 3.060 32.159 B B 5 6 -5.239 G G 12 11 3.052 -2.898 -0.490 -0.283 BB_DG5QBT6:DA11DC12_GG 5 0.364 -0.657 32.030 -0.025 0.946 2.226 31.642 B B 6 7 33.492 G G 11 10 3.654 17.133 0.387 -1.251 BB_QBT6DT7:DA10DA11_GG 6 -7.307 14.285 25.693 -5.456 -2.059 2.714 45.003 B B 7 8 -13.097 G G 10 9 2.948 -9.937 -0.305 0.626 BB_DT7DA8:DT9DA10_GG 7 4.071 -5.365 43.768 1.605 0.720 entity_poly ndb_struct_conf_na ndb_struct_na_base_pair ndb_struct_na_base_pair_step pdbx_entity_src_syn struct_conn chem_comp database_2 entity_poly pdbx_struct_mod_residue struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond repository Initial release Database references Data collection Derived calculations Polymer sequence Source and taxonomy Data collection Database references Derived calculations Polymer sequence Data collection 1 0 2014-03-12 1 1 2014-04-02 2 0 2019-05-15 3 0 2022-06-22 3 1 2024-02-28 _entity_poly.pdbx_seq_one_letter_code_can _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.organism_scientific _chem_comp.mon_nstd_flag _database_2.pdbx_DOI _database_2.pdbx_database_accession _entity_poly.pdbx_seq_one_letter_code_can _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2013-08-14 REL REL EDO 1,2-ETHANEDIOL HOH water polydeoxyribonucleotide 32630 synthetic construct sample polydeoxyribonucleotide 32630 synthetic construct sample EDO 508 4 EDO EDO 301 A EDO 509 4 EDO EDO 302 A EDO 510 4 EDO EDO 303 A EDO 511 4 EDO EDO 304 A HOH 301 5 HOH HOH 401 A HOH 302 5 HOH HOH 402 A HOH 303 5 HOH HOH 403 A HOH 304 5 HOH HOH 404 A HOH 305 5 HOH HOH 405 A HOH 306 5 HOH HOH 406 A HOH 307 5 HOH HOH 407 A HOH 308 5 HOH HOH 408 A HOH 309 5 HOH HOH 409 A HOH 310 5 HOH HOH 410 A HOH 311 5 HOH HOH 411 A HOH 312 5 HOH HOH 412 A HOH 313 5 HOH HOH 413 A HOH 314 5 HOH HOH 414 A HOH 315 5 HOH HOH 415 A HOH 316 5 HOH HOH 416 A HOH 317 5 HOH HOH 417 A HOH 318 5 HOH HOH 418 A HOH 319 5 HOH HOH 419 A HOH 320 5 HOH HOH 420 A HOH 321 5 HOH HOH 421 A HOH 323 5 HOH HOH 422 A HOH 324 5 HOH HOH 423 A HOH 326 5 HOH HOH 424 A HOH 327 5 HOH HOH 425 A HOH 328 5 HOH HOH 426 A HOH 330 5 HOH HOH 427 A HOH 331 5 HOH HOH 428 A HOH 332 5 HOH HOH 429 A HOH 333 5 HOH HOH 430 A HOH 334 5 HOH HOH 431 A HOH 335 5 HOH HOH 432 A HOH 336 5 HOH HOH 433 A HOH 337 5 HOH HOH 434 A HOH 338 5 HOH HOH 435 A HOH 339 5 HOH HOH 436 A HOH 341 5 HOH HOH 437 A HOH 342 5 HOH HOH 438 A HOH 343 5 HOH HOH 439 A HOH 344 5 HOH HOH 440 A HOH 345 5 HOH HOH 441 A HOH 346 5 HOH HOH 442 A HOH 347 5 HOH HOH 443 A HOH 348 5 HOH HOH 444 A HOH 349 5 HOH HOH 445 A HOH 350 5 HOH HOH 446 A HOH 351 5 HOH HOH 447 A HOH 352 5 HOH HOH 448 A HOH 353 5 HOH HOH 449 A HOH 354 5 HOH HOH 450 A HOH 355 5 HOH HOH 451 A HOH 356 5 HOH HOH 452 A HOH 357 5 HOH HOH 453 A HOH 358 5 HOH HOH 454 A HOH 359 5 HOH HOH 455 A HOH 360 5 HOH HOH 456 A HOH 361 5 HOH HOH 457 A HOH 362 5 HOH HOH 458 A HOH 363 5 HOH HOH 459 A HOH 364 5 HOH HOH 460 A HOH 366 5 HOH HOH 461 A HOH 367 5 HOH HOH 462 A HOH 369 5 HOH HOH 463 A HOH 370 5 HOH HOH 464 A HOH 371 5 HOH HOH 465 A HOH 372 5 HOH HOH 466 A HOH 374 5 HOH HOH 467 A HOH 375 5 HOH HOH 468 A HOH 376 5 HOH HOH 469 A HOH 377 5 HOH HOH 470 A HOH 378 5 HOH HOH 471 A HOH 379 5 HOH HOH 472 A HOH 380 5 HOH HOH 473 A HOH 381 5 HOH HOH 474 A HOH 384 5 HOH HOH 475 A HOH 385 5 HOH HOH 476 A HOH 387 5 HOH HOH 477 A HOH 388 5 HOH HOH 478 A HOH 389 5 HOH HOH 479 A HOH 390 5 HOH HOH 480 A HOH 392 5 HOH HOH 481 A HOH 393 5 HOH HOH 482 A HOH 394 5 HOH HOH 483 A HOH 395 5 HOH HOH 484 A HOH 396 5 HOH HOH 485 A HOH 397 5 HOH HOH 486 A HOH 398 5 HOH HOH 487 A HOH 400 5 HOH HOH 488 A HOH 401 5 HOH HOH 489 A HOH 403 5 HOH HOH 490 A HOH 404 5 HOH HOH 491 A HOH 406 5 HOH HOH 492 A HOH 407 5 HOH HOH 493 A HOH 409 5 HOH HOH 494 A HOH 410 5 HOH HOH 495 A HOH 411 5 HOH HOH 496 A HOH 412 5 HOH HOH 497 A HOH 414 5 HOH HOH 498 A HOH 415 5 HOH HOH 499 A HOH 416 5 HOH HOH 500 A HOH 417 5 HOH HOH 501 A HOH 419 5 HOH HOH 502 A HOH 420 5 HOH HOH 503 A HOH 421 5 HOH HOH 504 A HOH 422 5 HOH HOH 505 A HOH 425 5 HOH HOH 506 A HOH 426 5 HOH HOH 507 A HOH 427 5 HOH HOH 508 A HOH 428 5 HOH HOH 509 A HOH 429 5 HOH HOH 510 A HOH 433 5 HOH HOH 511 A HOH 434 5 HOH HOH 512 A HOH 435 5 HOH HOH 513 A HOH 436 5 HOH HOH 514 A HOH 437 5 HOH HOH 515 A HOH 438 5 HOH HOH 516 A HOH 439 5 HOH HOH 517 A HOH 440 5 HOH HOH 518 A HOH 441 5 HOH HOH 519 A HOH 442 5 HOH HOH 520 A HOH 443 5 HOH HOH 521 A HOH 444 5 HOH HOH 522 A HOH 446 5 HOH HOH 523 A HOH 448 5 HOH HOH 524 A HOH 449 5 HOH HOH 525 A HOH 450 5 HOH HOH 526 A HOH 451 5 HOH HOH 527 A HOH 452 5 HOH HOH 528 A HOH 453 5 HOH HOH 529 A HOH 454 5 HOH HOH 530 A HOH 455 5 HOH HOH 531 A HOH 456 5 HOH HOH 532 A HOH 457 5 HOH HOH 533 A HOH 458 5 HOH HOH 534 A HOH 459 5 HOH HOH 535 A HOH 460 5 HOH HOH 536 A HOH 461 5 HOH HOH 537 A HOH 463 5 HOH HOH 538 A HOH 464 5 HOH HOH 539 A HOH 465 5 HOH HOH 540 A HOH 466 5 HOH HOH 541 A HOH 467 5 HOH HOH 542 A HOH 468 5 HOH HOH 543 A HOH 368 5 HOH HOH 101 B HOH 423 5 HOH HOH 101 G HOH 424 5 HOH HOH 102 G HOH 430 5 HOH HOH 103 G HOH 431 5 HOH HOH 104 G n 1 -3 A n 2 -2 A n 3 -1 A n 4 0 A THR 24 n 5 THR 24 A TRP 25 n 6 TRP 25 A LEU 26 n 7 LEU 26 A SER 27 n 8 SER 27 A ASP 28 n 9 ASP 28 A PHE 29 n 10 PHE 29 A PRO 30 n 11 PRO 30 A GLN 31 n 12 GLN 31 A ALA 32 n 13 ALA 32 A TRP 33 n 14 TRP 33 A ALA 34 n 15 ALA 34 A GLU 35 n 16 GLU 35 A THR 36 n 17 THR 36 A GLY 37 n 18 GLY 37 A GLY 38 n 19 GLY 38 A MET 39 n 20 MET 39 A GLY 40 n 21 GLY 40 A LEU 41 n 22 LEU 41 A ALA 42 n 23 ALA 42 A VAL 43 n 24 VAL 43 A ARG 44 n 25 ARG 44 A GLN 45 n 26 GLN 45 A ALA 46 n 27 ALA 46 A PRO 47 n 28 PRO 47 A LEU 48 n 29 LEU 48 A ILE 49 n 30 ILE 49 A ILE 50 n 31 ILE 50 A PRO 51 n 32 PRO 51 A LEU 52 n 33 LEU 52 A LYS 53 n 34 LYS 53 A ALA 54 n 35 ALA 54 A THR 55 n 36 THR 55 A SER 56 n 37 SER 56 A THR 57 n 38 THR 57 A PRO 58 n 39 PRO 58 A VAL 59 n 40 VAL 59 A SER 60 n 41 SER 60 A ILE 61 n 42 ILE 61 A LYS 62 n 43 LYS 62 A GLN 63 n 44 GLN 63 A TYR 64 n 45 TYR 64 A PRO 65 n 46 PRO 65 A MET 66 n 47 MET 66 A SER 67 n 48 SER 67 A GLN 68 n 49 GLN 68 A GLU 69 n 50 GLU 69 A ALA 70 n 51 ALA 70 A ARG 71 n 52 ARG 71 A LEU 72 n 53 LEU 72 A GLY 73 n 54 GLY 73 A ILE 74 n 55 ILE 74 A LYS 75 n 56 LYS 75 A PRO 76 n 57 PRO 76 A HIS 77 n 58 HIS 77 A ILE 78 n 59 ILE 78 A GLN 79 n 60 GLN 79 A ARG 80 n 61 ARG 80 A LEU 81 n 62 LEU 81 A LEU 82 n 63 LEU 82 A ASP 83 n 64 ASP 83 A GLN 84 n 65 GLN 84 A GLY 85 n 66 GLY 85 A ILE 86 n 67 ILE 86 A LEU 87 n 68 LEU 87 A VAL 88 n 69 VAL 88 A PRO 89 n 70 PRO 89 A CYS 90 n 71 CYS 90 A GLN 91 n 72 GLN 91 A SER 92 n 73 SER 92 A PRO 93 n 74 PRO 93 A TRP 94 n 75 TRP 94 A ASN 95 n 76 ASN 95 A THR 96 n 77 THR 96 A PRO 97 n 78 PRO 97 A LEU 98 n 79 LEU 98 A LEU 99 n 80 LEU 99 A PRO 100 n 81 PRO 100 A VAL 101 n 82 VAL 101 A LYS 102 n 83 LYS 102 A n 84 103 A n 85 104 A n 86 105 A ALA 106 n 87 THR 106 A ASN 107 n 88 ASN 107 A ASP 108 n 89 ASP 108 A TYR 109 n 90 TYR 109 A ARG 110 n 91 ARG 110 A PRO 111 n 92 PRO 111 A VAL 112 n 93 VAL 112 A GLN 113 n 94 GLN 113 A ASP 114 n 95 ASP 114 A LEU 115 n 96 LEU 115 A ARG 116 n 97 ARG 116 A GLU 117 n 98 GLU 117 A VAL 118 n 99 VAL 118 A ASN 119 n 100 ASN 119 A LYS 120 n 101 LYS 120 A ARG 121 n 102 ARG 121 A VAL 122 n 103 VAL 122 A GLU 123 n 104 GLU 123 A ASP 124 n 105 ASP 124 A ILE 125 n 106 ILE 125 A HIS 126 n 107 HIS 126 A PRO 127 n 108 PRO 127 A THR 128 n 109 THR 128 A VAL 129 n 110 VAL 129 A PRO 130 n 111 PRO 130 A ASN 131 n 112 ASN 131 A PRO 132 n 113 PRO 132 A TYR 133 n 114 TYR 133 A ASN 134 n 115 ASN 134 A LEU 135 n 116 LEU 135 A LEU 136 n 117 LEU 136 A SER 137 n 118 SER 137 A GLY 138 n 119 GLY 138 A LEU 139 n 120 LEU 139 A PRO 140 n 121 PRO 140 A PRO 141 n 122 PRO 141 A SER 142 n 123 SER 142 A HIS 143 n 124 HIS 143 A GLN 144 n 125 GLN 144 A TRP 145 n 126 TRP 145 A TYR 146 n 127 TYR 146 A THR 147 n 128 THR 147 A VAL 148 n 129 VAL 148 A LEU 149 n 130 LEU 149 A ASP 150 n 131 ASP 150 A LEU 151 n 132 LEU 151 A LYS 152 n 133 LYS 152 A ASP 153 n 134 ASP 153 A ALA 154 n 135 ALA 154 A PHE 155 n 136 PHE 155 A PHE 156 n 137 PHE 156 A CYS 157 n 138 CYS 157 A LEU 158 n 139 LEU 158 A ARG 159 n 140 ARG 159 A LEU 160 n 141 LEU 160 A HIS 161 n 142 HIS 161 A PRO 162 n 143 PRO 162 A THR 163 n 144 THR 163 A SER 164 n 145 SER 164 A GLN 165 n 146 GLN 165 A PRO 166 n 147 PRO 166 A LEU 167 n 148 LEU 167 A PHE 168 n 149 PHE 168 A ALA 169 n 150 ALA 169 A PHE 170 n 151 PHE 170 A GLU 171 n 152 GLU 171 A TRP 172 n 153 TRP 172 A ARG 173 n 154 ARG 173 A ASP 174 n 155 ASP 174 A PRO 175 n 156 PRO 175 A GLU 176 n 157 GLU 176 A MET 177 n 158 MET 177 A GLY 178 n 159 GLY 178 A ILE 179 n 160 ILE 179 A SER 180 n 161 SER 180 A GLY 181 n 162 GLY 181 A GLN 182 n 163 GLN 182 A LEU 183 n 164 LEU 183 A THR 184 n 165 THR 184 A TRP 185 n 166 TRP 185 A THR 186 n 167 THR 186 A ARG 187 n 168 ARG 187 A LEU 188 n 169 LEU 188 A PRO 189 n 170 PRO 189 A GLN 190 n 171 GLN 190 A GLY 191 n 172 GLY 191 A PHE 192 n 173 PHE 192 A LYS 193 n 174 LYS 193 A ASN 194 n 175 ASN 194 A SER 195 n 176 SER 195 A PRO 196 n 177 PRO 196 A THR 197 n 178 THR 197 A LEU 198 n 179 LEU 198 A PHE 199 n 180 PHE 199 A ASP 200 n 181 ASP 200 A GLU 201 n 182 GLU 201 A ALA 202 n 183 ALA 202 A LEU 203 n 184 LEU 203 A HIS 204 n 185 HIS 204 A ARG 205 n 186 ARG 205 A ASP 206 n 187 ASP 206 A LEU 207 n 188 LEU 207 A ALA 208 n 189 ALA 208 A ASP 209 n 190 ASP 209 A PHE 210 n 191 PHE 210 A ARG 211 n 192 ARG 211 A ILE 212 n 193 ILE 212 A GLN 213 n 194 GLN 213 A HIS 214 n 195 HIS 214 A PRO 215 n 196 PRO 215 A ASP 216 n 197 ASP 216 A LEU 217 n 198 LEU 217 A ILE 218 n 199 ILE 218 A LEU 219 n 200 LEU 219 A LEU 220 n 201 LEU 220 A GLN 221 n 202 GLN 221 A TYR 222 n 203 TYR 222 A VAL 223 n 204 VAL 223 A ASP 224 n 205 ASP 224 A ASP 225 n 206 ASP 225 A LEU 226 n 207 LEU 226 A LEU 227 n 208 LEU 227 A LEU 228 n 209 LEU 228 A ALA 229 n 210 ALA 229 A ALA 230 n 211 ALA 230 A THR 231 n 212 THR 231 A SER 232 n 213 SER 232 A GLU 233 n 214 GLU 233 A LEU 234 n 215 LEU 234 A ASP 235 n 216 ASP 235 A CYS 236 n 217 CYS 236 A GLN 237 n 218 GLN 237 A GLN 238 n 219 GLN 238 A GLY 239 n 220 GLY 239 A THR 240 n 221 THR 240 A ARG 241 n 222 ARG 241 A ALA 242 n 223 ALA 242 A LEU 243 n 224 LEU 243 A LEU 244 n 225 LEU 244 A GLN 245 n 226 GLN 245 A THR 246 n 227 THR 246 A LEU 247 n 228 LEU 247 A GLY 248 n 229 GLY 248 A ASN 249 n 230 ASN 249 A LEU 250 n 231 LEU 250 A GLY 251 n 232 GLY 251 A TYR 252 n 233 TYR 252 A ARG 253 n 234 ARG 253 A ALA 254 n 235 ALA 254 A SER 255 n 236 SER 255 A ALA 256 n 237 ALA 256 A LYS 257 n 238 LYS 257 A LYS 258 n 239 LYS 258 A ALA 259 n 240 ALA 259 A GLN 260 n 241 GLN 260 A ILE 261 n 242 ILE 261 A CYS 262 n 243 CYS 262 A GLN 263 n 244 GLN 263 A LYS 264 n 245 LYS 264 A GLN 265 n 246 GLN 265 A VAL 266 n 247 VAL 266 A LYS 267 n 248 LYS 267 A TYR 268 n 249 TYR 268 A LEU 269 n 250 LEU 269 A GLY 270 n 251 GLY 270 A TYR 271 n 252 TYR 271 A LEU 272 n 253 LEU 272 A LEU 273 n 254 LEU 273 A LYS 274 n 255 LYS 274 A GLU 275 n 256 GLU 275 A GLY 276 n 257 GLY 276 A GLN 277 n 258 GLN 277 A ARG 278 n 259 ARG 278 A DA 1 n 1 DA 1 B DT 2 n 2 DT 2 B DC 3 n 3 DC 3 B DC 4 n 4 DC 4 B DG 5 n 5 DG 5 B SDT 6 n 6 QBT 6 B DT 7 n 7 DT 7 B DA 8 n 8 DA 8 B DT 9 n 1 DT 9 G DA 10 n 2 DA 10 G DA 11 n 3 DA 11 G DC 12 n 4 DC 12 G DG 13 n 5 DG 13 G DG 14 n 6 DG 14 G DA 15 n 7 DA 15 G DT 16 n 8 DT 16 G author_defined_assembly 3 trimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 88 A N VAL 69 A O THR 184 A O THR 165 A O LEU 183 A O LEU 164 A N PHE 170 A N PHE 151 A N LEU 99 A N LEU 80 A O VAL 112 A O VAL 93 A N LEU 220 A N LEU 201 A O LEU 227 A O LEU 208 A O LEU 226 A O LEU 207 A N LEU 149 A N LEU 130 A N TYR 146 A N TYR 127 A O GLN 263 A O GLN 244 A N VAL 266 A N VAL 247 A O LEU 273 A O LEU 254 1 A OG1 THR 106 A OG1 THR 87 1 Y 1 A CG2 THR 106 A CG2 THR 87 1 Y 1 A GLY -3 A GLY 1 1 Y 1 A SER -2 A SER 2 1 Y 1 A HIS -1 A HIS 3 1 Y 1 A MET 0 A MET 4 1 Y 1 A LYS 103 A LYS 84 1 Y 1 A PRO 104 A PRO 85 1 Y 1 A GLY 105 A GLY 86 1 Y 1 3.26 0.30 108.30 111.56 B B B O4' C1' N9 DG DG DG 5 5 5 N 1 11.64 1.20 119.70 131.34 B B B C3' O3' P DG DG QBT 5 5 6 Y 1 18.83 1.90 104.00 122.83 B B B O3' P O5' DG QBT QBT 5 6 6 Y 1 48.69 1.20 119.70 168.39 B B B C3' O3' P QBT QBT DT 6 6 7 Y 1 1.97 0.30 108.30 110.27 B B B O4' C1' N1 DT DT DT 7 7 7 N 1 6.68 0.60 114.60 121.28 B B B N1 C2 N3 DT DT DT 7 7 7 N 1 -6.58 0.60 127.20 120.62 B B B C2 N3 C4 DT DT DT 7 7 7 N 1 6.88 0.60 115.20 122.08 B B B N3 C4 C5 DT DT DT 7 7 7 N 1 -3.74 0.60 123.70 119.96 B B B C5 C6 N1 DT DT DT 7 7 7 N 1 -6.14 0.60 122.30 116.16 B B B N3 C2 O2 DT DT DT 7 7 7 N 1 -5.43 0.70 124.90 119.47 B B B C5 C4 O4 DT DT DT 7 7 7 N 1 -12.69 1.90 104.00 91.31 B B B O3' P O5' DT DA DA 7 8 8 Y 1 6.65 1.10 110.50 117.15 B B B O3' P OP1 DT DA DA 7 8 8 Y 1 B B C2 N3 DT DT 7 7 -0.062 0.008 1.373 1.311 N 1 B B N3 C4 DT DT 7 7 -0.054 0.008 1.382 1.328 N 1 B B C5 C6 DT DT 7 7 0.068 0.007 1.339 1.407 N 1 B B C5 C7 DT DT 7 7 0.046 0.006 1.496 1.542 N 1 B G O3' P DA DT 8 9 1.60 1_555 2_455 1 A LEU 41 -169.67 117.90 1 A MET 177 -140.48 12.15 1 A VAL 223 47.74 -104.73 29.54 -1.54930 -0.00000 -0.00000 -4.32180 -0.00000 -6.89570 0.239 0.201 0.202 2.14 33.73 398 21193 19139 2.080 90.6 1.000 1.000 0.270 1 0.000 MOLECULAR REPLACEMENT 21.040 0.90 1.11 ML FLAT BULK SOLVENT MODEL 49.61 0.36 2.14 33.73 148 2508 16 325 2019 0.007 2450 1.070 3382 19.003 952 0.065 367 0.007 383 0.2397 0.1973 2.4496 103 5189 77.00 0.2403 0.1981 3.0859 152 6521 96.00 0.2367 0.2017 33.7348 143 7031 99.00 19.05 2.14 33.73 4M94 21193 19858 0 0 0.047 1 21.70 3.75 93.7 data scaling http://www.bruker-axs.de/ SAINT package refinement Paul D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data collection APEX data reduction SAINT data reduction XPREP phasing PHASER d(ATCCGTTATAACGGAT) complexed with Moloney Murine Leukemia virus reverse transcriptase catalytic fragment 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 4 N N 5 N N 5 N N 5 N N A THR 24 A THR 5 HELX_P A PHE 29 A PHE 10 1 1 6 A PRO 30 A PRO 11 HELX_P A ALA 32 A ALA 13 5 2 3 A TRP 33 A TRP 14 HELX_P A GLY 38 A GLY 19 1 3 6 A SER 67 A SER 48 HELX_P A GLN 84 A GLN 65 1 4 18 A LEU 115 A LEU 96 HELX_P A LYS 120 A LYS 101 1 5 6 A ASN 131 A ASN 112 HELX_P A SER 137 A SER 118 1 6 7 A ALA 154 A ALA 135 HELX_P A LEU 158 A LEU 139 5 7 5 A SER 164 A SER 145 HELX_P A ALA 169 A ALA 150 5 8 6 A ASP 174 A ASP 155 HELX_P A GLY 178 A GLY 159 5 9 5 A ASN 194 A ASN 175 HELX_P A HIS 214 A HIS 195 1 10 21 A SER 232 A SER 213 HELX_P A GLY 251 A GLY 232 1 11 20 covale 1.589 both B DG 5 B O3' DG 5 1_555 B QBT 6 B P QBT 6 1_555 covale 1.584 none B QBT 6 B C5 QBT 6 1_555 B DT 7 B C7 DT 7 1_555 hydrog WATSON-CRICK B DA 1 B N1 DA 1 1_555 G DT 16 C N3 DT 8 1_555 hydrog WATSON-CRICK B DA 1 B N6 DA 1 1_555 G DT 16 C O4 DT 8 1_555 hydrog WATSON-CRICK B DT 2 B N3 DT 2 1_555 G DA 15 C N1 DA 7 1_555 hydrog WATSON-CRICK B DT 2 B O4 DT 2 1_555 G DA 15 C N6 DA 7 1_555 hydrog WATSON-CRICK B DC 3 B N3 DC 3 1_555 G DG 14 C N1 DG 6 1_555 hydrog WATSON-CRICK B DC 3 B N4 DC 3 1_555 G DG 14 C O6 DG 6 1_555 hydrog WATSON-CRICK B DC 3 B O2 DC 3 1_555 G DG 14 C N2 DG 6 1_555 hydrog WATSON-CRICK B DC 4 B N3 DC 4 1_555 G DG 13 C N1 DG 5 1_555 hydrog WATSON-CRICK B DC 4 B N4 DC 4 1_555 G DG 13 C O6 DG 5 1_555 hydrog WATSON-CRICK B DC 4 B O2 DC 4 1_555 G DG 13 C N2 DG 5 1_555 hydrog WATSON-CRICK B DG 5 B N1 DG 5 1_555 G DC 12 C N3 DC 4 1_555 hydrog WATSON-CRICK B DG 5 B N2 DG 5 1_555 G DC 12 C O2 DC 4 1_555 hydrog WATSON-CRICK B DG 5 B O6 DG 5 1_555 G DC 12 C N4 DC 4 1_555 hydrog WATSON-CRICK B QBT 6 B N3 QBT 6 1_555 G DA 11 C N1 DA 3 1_555 hydrog WATSON-CRICK B QBT 6 B O4 QBT 6 1_555 G DA 11 C N6 DA 3 1_555 hydrog WATSON-CRICK B DT 7 B N3 DT 7 1_555 G DA 10 C N1 DA 2 1_555 hydrog WATSON-CRICK B DT 7 B O4 DT 7 1_555 G DA 10 C N6 DA 2 1_555 hydrog WATSON-CRICK B DA 8 B N1 DA 8 1_555 G DT 9 C N3 DT 1 1_555 hydrog WATSON-CRICK B DA 8 B N6 DA 8 1_555 G DT 9 C O4 DT 1 1_555 TRANSFERASE/DNA Protein-DNA complex, Reverse transcriptase, DNA binding, Spore photoproduct, TRANSFERASE-DNA complex POL_MLVMS UNP 1 683 P03355 TWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLLPVKK PGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGISGQL TWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKAQICQ KQVKYLGYLLKEGQR 4M94 PDB 2 4M94 ATCCGTTA 4M94 PDB 3 4M94 TAACGGAT 683 937 4M94 24 278 P03355 A 1 5 259 1 8 4M94 1 8 4M94 B 2 1 8 9 16 4M94 9 16 4M94 G 3 1 8 1 expression tag GLY -3 4M94 A P03355 UNP 1 1 expression tag SER -2 4M94 A P03355 UNP 2 1 expression tag HIS -1 4M94 A P03355 UNP 3 1 expression tag MET 0 4M94 A P03355 UNP 4 3 2 4 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LEU 87 A LEU 68 A CYS 90 A CYS 71 A GLN 182 A GLN 163 A TRP 185 A TRP 166 A PHE 170 A PHE 151 A GLU 171 A GLU 152 A LEU 98 A LEU 79 A VAL 101 A VAL 82 A ARG 110 A ARG 91 A GLN 113 A GLN 94 A ILE 218 A ILE 199 A TYR 222 A TYR 203 A ASP 225 A ASP 206 A ALA 230 A ALA 211 A TRP 145 A TRP 126 A ASP 150 A ASP 131 A GLN 260 A GLN 241 A GLN 263 A GLN 244 A GLN 265 A GLN 246 A TYR 268 A TYR 249 A TYR 271 A TYR 252 A LYS 274 A LYS 255 BINDING SITE FOR RESIDUE EDO A 301 A EDO 301 Software 5 BINDING SITE FOR RESIDUE EDO A 302 A EDO 302 Software 4 BINDING SITE FOR RESIDUE EDO A 303 A EDO 303 Software 5 BINDING SITE FOR RESIDUE EDO A 304 A EDO 304 Software 3 A ASP 153 A ASP 134 5 1_555 A ALA 154 A ALA 135 5 1_555 A PHE 155 A PHE 136 5 1_555 A PHE 156 A PHE 137 5 1_555 A GLN 190 A GLN 171 5 1_555 A GLN 63 A GLN 44 4 1_555 A GLU 171 A GLU 152 4 1_555 A TRP 172 A TRP 153 4 1_555 A ARG 173 A ARG 154 4 1_555 A PRO 111 A PRO 92 5 1_555 A PHE 156 A PHE 137 5 1_555 A TRP 185 A TRP 166 5 1_555 A EDO 304 G EDO 5 1_555 A HOH 428 H HOH 5 1_555 A HIS 77 A HIS 58 3 1_555 A ARG 80 A ARG 61 3 1_555 A EDO 303 F EDO 3 1_555 18 P 21 21 2