0.035393 0.000000 0.008451 0.000000 0.015005 0.000000 0.000000 0.000000 0.031519 0.00000 0.00000 0.00000 Galilee, M. Alian, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 103.43 90.00 28.254 66.643 32.619 C3 H7 N O2 89.093 y ALANINE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N O N 21 N N N 22 N O N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N N N 32 S C N 33 N C N 34 N O N 35 N C N 36 N C N 37 N O N 38 N O N 39 N O N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N N N 48 R C N 49 N C N 50 N O N 51 N C N 52 N S N 53 N O N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N N N 62 S C N 63 N C N 64 N O N 65 N C N 66 N C N 67 N C N 68 N O N 69 N N N 70 N O N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N N N 82 S C N 83 N C N 84 N O N 85 N C N 86 N C N 87 N C N 88 N O N 89 N O N 90 N O N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N N N 101 N C N 102 N C N 103 N O N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N N N 111 S C N 112 N C N 113 N O N 114 N C Y 115 N C Y 116 N N Y 117 N C Y 118 N C Y 119 N N N 120 N O N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N O N 132 N H N 133 N H N 134 N N N 135 S C N 136 N C N 137 N O N 138 S C N 139 N C N 140 N C N 141 N C N 142 N O N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N N N 157 S C N 158 N C N 159 N O N 160 N C N 161 N C N 162 N C N 163 N C N 164 N O N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N N N 179 S C N 180 N C N 181 N O N 182 N C N 183 N C N 184 N C N 185 N C N 186 N N N 187 N O N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N N N 204 S C N 205 N C N 206 N O N 207 N C N 208 N C N 209 N S N 210 N C N 211 N O N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N N N 224 S C N 225 N C N 226 N O N 227 N C Y 228 N C Y 229 N C Y 230 N C Y 231 N C Y 232 N C Y 233 N C N 234 N O N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N N N 247 S C N 248 N C N 249 N O N 250 N C N 251 N C N 252 N C N 253 N O N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N N N 264 S C N 265 N C N 266 N O N 267 N C N 268 N O N 269 N O N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N N N 278 S C N 279 N C N 280 N O N 281 R C N 282 N O N 283 N C N 284 N O N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 S C N 296 N C N 297 N O N 298 N C Y 299 N C Y 300 N C Y 301 N C Y 302 N N Y 303 N C Y 304 N C Y 305 N C Y 306 N C Y 307 N C N 308 N O N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C N 332 N O N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C N 350 N C N 351 N C N 352 N O N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N doub N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N doub N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N doub N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N doub N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N doub N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N doub N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing Y 114 N sing Y 115 N doub Y 116 N doub N 117 N sing Y 118 N sing N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N doub N 218 N sing N 219 N sing N 220 N sing N 221 N sing Y 222 N doub Y 223 N sing Y 224 N sing N 225 N sing Y 226 N doub N 227 N sing Y 228 N doub N 229 N sing Y 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N doub N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N doub N 287 N sing N 288 N sing N 289 N sing N 290 N sing Y 291 N doub Y 292 N sing Y 293 N sing N 294 N sing Y 295 N doub Y 296 N sing Y 297 N sing N 298 N sing Y 299 N sing Y 300 N doub N 301 N sing Y 302 N doub N 303 N sing Y 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N doub N 315 N sing N 316 N sing N 317 N sing N 318 N sing Y 319 N doub Y 320 N sing Y 321 N sing N 322 N sing Y 323 N doub N 324 N sing Y 325 N doub N 326 N sing Y 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N doub N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing UK Structure STRUE6 2005 0969-2126 22 1512 1519 10.1016/j.str.2014.08.001 25199694 Identification of phe187 as a crucial dimerization determinant facilitates crystallization of a monomeric retroviral integrase core domain. 2014 10.2210/pdb4mq3/pdb pdb_00004mq3 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 103 1 mirrors PIXEL 2013-07-30 DECTRIS PILATUS 6M Double Crystal Monochromator SINGLE WAVELENGTH M x-ray 1 0.918409 1.0 14.1 BESSY 0.918409 SYNCHROTRON BESSY BEAMLINE 14.1 14667.780 Integrase Catalytic Core Domain F1030K 1 man polymer 18.015 water 186 nat water IN no no GSHMGIWQMDCTHFDGKIILVGIHVESGYIWAQIISQETADCTVKAVLQLLSAHNVTELQTDNGPNFKNQKMEGVLNYMG VKHKFGIPGNPQSQALVENVNHTLKVWIQKFLPETTSLDNALSLAVHSLNKK GSHMGIWQMDCTHFDGKIILVGIHVESGYIWAQIISQETADCTVKAVLQLLSAHNVTELQTDNGPNFKNQKMEGVLNYMG VKHKFGIPGNPQSQALVENVNHTLKVWIQKFLPETTSLDNALSLAVHSLNKK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n FIV isolate Petaluma sample pol 11674 Feline immunodeficiency virus 562 Escherichia coli ArcticExpress (DE3) plasmid pET28b 1 2.07 40.64 VAPOR DIFFUSION 8.5 0.2M Trimethylamine N-oxide, 0.1M Tris pH 8.5, 20% PEG MME 2000, VAPOR DIFFUSION, temperature 293K 293 VAPOR DIFFUSION 5.5 0.2M Ammonium acetate, 0.1M Bis-Tris pH 5.5, 25% PEG 3350, VAPOR DIFFUSION, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq_dif repository Initial release Database references Data collection Database references Refinement description 1 0 2014-09-17 1 1 2014-11-19 1 2 2023-09-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details RCSB Y RCSB 2013-09-15 REL REL HOH water 3F9K PDB ENTRY 3f9k PDB experimental model HOH 1 2 HOH HOH 201 A HOH 2 2 HOH HOH 202 A HOH 3 2 HOH HOH 203 A HOH 4 2 HOH HOH 204 A HOH 5 2 HOH HOH 205 A HOH 6 2 HOH HOH 206 A HOH 7 2 HOH HOH 207 A HOH 8 2 HOH HOH 208 A HOH 9 2 HOH HOH 209 A HOH 10 2 HOH HOH 210 A HOH 11 2 HOH HOH 211 A HOH 12 2 HOH HOH 212 A HOH 13 2 HOH HOH 213 A HOH 14 2 HOH HOH 214 A HOH 15 2 HOH HOH 215 A HOH 16 2 HOH HOH 216 A HOH 17 2 HOH HOH 217 A HOH 18 2 HOH HOH 218 A HOH 19 2 HOH HOH 219 A HOH 20 2 HOH HOH 220 A HOH 21 2 HOH HOH 221 A HOH 22 2 HOH HOH 222 A HOH 23 2 HOH HOH 223 A HOH 24 2 HOH HOH 224 A HOH 25 2 HOH HOH 225 A HOH 26 2 HOH HOH 226 A HOH 27 2 HOH HOH 227 A HOH 28 2 HOH HOH 228 A HOH 29 2 HOH HOH 229 A HOH 30 2 HOH HOH 230 A HOH 31 2 HOH HOH 231 A HOH 32 2 HOH HOH 232 A HOH 33 2 HOH HOH 233 A HOH 34 2 HOH HOH 234 A HOH 35 2 HOH HOH 235 A HOH 36 2 HOH HOH 236 A HOH 37 2 HOH HOH 237 A HOH 38 2 HOH HOH 238 A HOH 39 2 HOH HOH 239 A HOH 40 2 HOH HOH 240 A HOH 41 2 HOH HOH 241 A HOH 42 2 HOH HOH 242 A HOH 43 2 HOH HOH 243 A HOH 44 2 HOH HOH 244 A HOH 45 2 HOH HOH 245 A HOH 46 2 HOH HOH 246 A HOH 47 2 HOH HOH 247 A HOH 48 2 HOH HOH 248 A HOH 49 2 HOH HOH 249 A HOH 50 2 HOH HOH 250 A HOH 51 2 HOH HOH 251 A HOH 52 2 HOH HOH 252 A HOH 53 2 HOH HOH 253 A HOH 54 2 HOH HOH 254 A HOH 55 2 HOH HOH 255 A HOH 56 2 HOH HOH 256 A HOH 57 2 HOH HOH 257 A HOH 58 2 HOH HOH 258 A HOH 59 2 HOH HOH 259 A HOH 60 2 HOH HOH 260 A HOH 61 2 HOH HOH 261 A HOH 62 2 HOH HOH 262 A HOH 63 2 HOH HOH 263 A HOH 64 2 HOH HOH 264 A HOH 65 2 HOH HOH 265 A HOH 66 2 HOH HOH 266 A HOH 67 2 HOH HOH 267 A HOH 68 2 HOH HOH 268 A HOH 69 2 HOH HOH 269 A HOH 70 2 HOH HOH 270 A HOH 71 2 HOH HOH 271 A HOH 72 2 HOH HOH 272 A HOH 73 2 HOH HOH 273 A HOH 74 2 HOH HOH 274 A HOH 75 2 HOH HOH 275 A HOH 76 2 HOH HOH 276 A HOH 77 2 HOH HOH 277 A HOH 78 2 HOH HOH 278 A HOH 79 2 HOH HOH 279 A HOH 80 2 HOH HOH 280 A HOH 81 2 HOH HOH 281 A HOH 82 2 HOH HOH 282 A HOH 83 2 HOH HOH 283 A HOH 84 2 HOH HOH 284 A HOH 85 2 HOH HOH 285 A HOH 86 2 HOH HOH 286 A HOH 87 2 HOH HOH 287 A HOH 88 2 HOH HOH 288 A HOH 89 2 HOH HOH 289 A HOH 90 2 HOH HOH 290 A HOH 91 2 HOH HOH 291 A HOH 92 2 HOH HOH 292 A HOH 93 2 HOH HOH 293 A HOH 94 2 HOH HOH 294 A HOH 95 2 HOH HOH 295 A HOH 96 2 HOH HOH 296 A HOH 97 2 HOH HOH 297 A HOH 98 2 HOH HOH 298 A HOH 99 2 HOH HOH 299 A HOH 100 2 HOH HOH 300 A HOH 101 2 HOH HOH 301 A HOH 102 2 HOH HOH 302 A HOH 103 2 HOH HOH 303 A HOH 104 2 HOH HOH 304 A HOH 105 2 HOH HOH 305 A HOH 106 2 HOH HOH 306 A HOH 107 2 HOH HOH 307 A HOH 108 2 HOH HOH 308 A HOH 109 2 HOH HOH 309 A HOH 110 2 HOH HOH 310 A HOH 111 2 HOH HOH 311 A HOH 112 2 HOH HOH 312 A HOH 113 2 HOH HOH 313 A HOH 114 2 HOH HOH 314 A HOH 115 2 HOH HOH 315 A HOH 116 2 HOH HOH 316 A HOH 117 2 HOH HOH 317 A HOH 118 2 HOH HOH 318 A HOH 119 2 HOH HOH 319 A HOH 120 2 HOH HOH 320 A HOH 121 2 HOH HOH 321 A HOH 122 2 HOH HOH 322 A HOH 123 2 HOH HOH 323 A HOH 124 2 HOH HOH 324 A HOH 125 2 HOH HOH 325 A HOH 126 2 HOH HOH 326 A HOH 127 2 HOH HOH 327 A HOH 128 2 HOH HOH 328 A HOH 129 2 HOH HOH 329 A HOH 130 2 HOH HOH 330 A HOH 131 2 HOH HOH 331 A HOH 132 2 HOH HOH 332 A HOH 133 2 HOH HOH 333 A HOH 134 2 HOH HOH 334 A HOH 135 2 HOH HOH 335 A HOH 136 2 HOH HOH 336 A HOH 137 2 HOH HOH 337 A HOH 138 2 HOH HOH 338 A HOH 139 2 HOH HOH 339 A HOH 140 2 HOH HOH 340 A HOH 141 2 HOH HOH 341 A HOH 142 2 HOH HOH 342 A HOH 143 2 HOH HOH 343 A HOH 144 2 HOH HOH 344 A HOH 145 2 HOH HOH 345 A HOH 147 2 HOH HOH 346 A HOH 148 2 HOH HOH 347 A HOH 149 2 HOH HOH 348 A HOH 151 2 HOH HOH 349 A HOH 152 2 HOH HOH 350 A HOH 153 2 HOH HOH 351 A HOH 154 2 HOH HOH 352 A HOH 155 2 HOH HOH 353 A HOH 156 2 HOH HOH 354 A HOH 157 2 HOH HOH 355 A HOH 158 2 HOH HOH 356 A HOH 159 2 HOH HOH 357 A HOH 160 2 HOH HOH 358 A HOH 161 2 HOH HOH 359 A HOH 162 2 HOH HOH 360 A HOH 163 2 HOH HOH 361 A HOH 164 2 HOH HOH 362 A HOH 166 2 HOH HOH 363 A HOH 167 2 HOH HOH 364 A HOH 168 2 HOH HOH 365 A HOH 169 2 HOH HOH 366 A HOH 171 2 HOH HOH 367 A HOH 172 2 HOH HOH 368 A HOH 173 2 HOH HOH 369 A HOH 174 2 HOH HOH 370 A HOH 175 2 HOH HOH 371 A HOH 176 2 HOH HOH 372 A HOH 177 2 HOH HOH 373 A HOH 178 2 HOH HOH 374 A HOH 179 2 HOH HOH 375 A HOH 180 2 HOH HOH 376 A HOH 181 2 HOH HOH 377 A HOH 182 2 HOH HOH 378 A HOH 183 2 HOH HOH 379 A HOH 184 2 HOH HOH 380 A HOH 185 2 HOH HOH 381 A HOH 186 2 HOH HOH 382 A HOH 187 2 HOH HOH 383 A HOH 188 2 HOH HOH 384 A HOH 189 2 HOH HOH 385 A HOH 1 2 HOH HOH 386 A n 1 57 A n 2 58 A n 3 59 A MET 60 n 4 MET 60 A GLY 61 n 5 GLY 61 A ILE 62 n 6 ILE 62 A TRP 63 n 7 TRP 63 A GLN 64 n 8 GLN 64 A MET 65 n 9 MET 65 A ASP 66 n 10 ASP 66 A CYS 67 n 11 CYS 67 A THR 68 n 12 THR 68 A HIS 69 n 13 HIS 69 A PHE 70 n 14 PHE 70 A ASP 71 n 15 ASP 71 A GLY 72 n 16 GLY 72 A LYS 73 n 17 LYS 73 A ILE 74 n 18 ILE 74 A ILE 75 n 19 ILE 75 A LEU 76 n 20 LEU 76 A VAL 77 n 21 VAL 77 A GLY 78 n 22 GLY 78 A ILE 79 n 23 ILE 79 A HIS 80 n 24 HIS 80 A VAL 81 n 25 VAL 81 A GLU 82 n 26 GLU 82 A SER 83 n 27 SER 83 A GLY 84 n 28 GLY 84 A TYR 85 n 29 TYR 85 A ILE 86 n 30 ILE 86 A TRP 87 n 31 TRP 87 A ALA 88 n 32 ALA 88 A GLN 89 n 33 GLN 89 A ILE 90 n 34 ILE 90 A ILE 91 n 35 ILE 91 A SER 92 n 36 SER 92 A GLN 93 n 37 GLN 93 A GLU 94 n 38 GLU 94 A THR 95 n 39 THR 95 A ALA 96 n 40 ALA 96 A ASP 97 n 41 ASP 97 A CYS 98 n 42 CYS 98 A THR 99 n 43 THR 99 A VAL 100 n 44 VAL 100 A LYS 101 n 45 LYS 101 A ALA 102 n 46 ALA 102 A VAL 103 n 47 VAL 103 A LEU 104 n 48 LEU 104 A GLN 105 n 49 GLN 105 A LEU 106 n 50 LEU 106 A LEU 107 n 51 LEU 107 A SER 108 n 52 SER 108 A ALA 109 n 53 ALA 109 A HIS 110 n 54 HIS 110 A ASN 111 n 55 ASN 111 A VAL 112 n 56 VAL 112 A THR 113 n 57 THR 113 A GLU 114 n 58 GLU 114 A LEU 115 n 59 LEU 115 A GLN 116 n 60 GLN 116 A THR 117 n 61 THR 117 A ASP 118 n 62 ASP 118 A ASN 119 n 63 ASN 119 A GLY 120 n 64 GLY 120 A PRO 121 n 65 PRO 121 A ASN 122 n 66 ASN 122 A PHE 123 n 67 PHE 123 A LYS 124 n 68 LYS 124 A ASN 125 n 69 ASN 125 A GLN 126 n 70 GLN 126 A LYS 127 n 71 LYS 127 A MET 128 n 72 MET 128 A GLU 129 n 73 GLU 129 A GLY 130 n 74 GLY 130 A VAL 131 n 75 VAL 131 A LEU 132 n 76 LEU 132 A ASN 133 n 77 ASN 133 A TYR 134 n 78 TYR 134 A MET 135 n 79 MET 135 A GLY 136 n 80 GLY 136 A VAL 137 n 81 VAL 137 A LYS 138 n 82 LYS 138 A HIS 139 n 83 HIS 139 A LYS 140 n 84 LYS 140 A PHE 141 n 85 PHE 141 A GLY 142 n 86 GLY 142 A ILE 143 n 87 ILE 143 A PRO 144 n 88 PRO 144 A GLY 145 n 89 GLY 145 A ASN 146 n 90 ASN 146 A PRO 147 n 91 PRO 147 A GLN 148 n 92 GLN 148 A SER 149 n 93 SER 149 A GLN 150 n 94 GLN 150 A ALA 151 n 95 ALA 151 A LEU 152 n 96 LEU 152 A VAL 153 n 97 VAL 153 A GLU 154 n 98 GLU 154 A ASN 155 n 99 ASN 155 A VAL 156 n 100 VAL 156 A ASN 157 n 101 ASN 157 A HIS 158 n 102 HIS 158 A THR 159 n 103 THR 159 A LEU 160 n 104 LEU 160 A LYS 161 n 105 LYS 161 A VAL 162 n 106 VAL 162 A TRP 163 n 107 TRP 163 A ILE 164 n 108 ILE 164 A GLN 165 n 109 GLN 165 A LYS 166 n 110 LYS 166 A PHE 167 n 111 PHE 167 A LEU 168 n 112 LEU 168 A PRO 169 n 113 PRO 169 A GLU 170 n 114 GLU 170 A THR 171 n 115 THR 171 A THR 172 n 116 THR 172 A SER 173 n 117 SER 173 A LEU 174 n 118 LEU 174 A ASP 175 n 119 ASP 175 A ASN 176 n 120 ASN 176 A ALA 177 n 121 ALA 177 A LEU 178 n 122 LEU 178 A SER 179 n 123 SER 179 A LEU 180 n 124 LEU 180 A ALA 181 n 125 ALA 181 A VAL 182 n 126 VAL 182 A HIS 183 n 127 HIS 183 A SER 184 n 128 SER 184 A LEU 185 n 129 LEU 185 A ASN 186 n 130 ASN 186 A LYS 187 n 131 LYS 187 A LYS 188 n 132 LYS 188 A author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLN 89 A O GLN 33 A N LEU 76 A N LEU 20 A O ILE 75 A O ILE 19 A N THR 68 A N THR 12 A N TRP 63 A N TRP 7 A O GLN 116 A O GLN 60 A N LEU 115 A N LEU 59 A O LYS 138 A O LYS 82 1 A GLY 57 A GLY 1 1 Y 1 A SER 58 A SER 2 1 Y 1 A HIS 59 A HIS 3 1 Y 1 A A NE2 O GLN HOH 148 325 1.48 1 A A CB O MET HOH 60 320 1.83 1 A A CB O ASN HOH 122 344 2.11 1 A A O O HOH HOH 272 304 2.11 1 A A O O HOH HOH 379 380 2.18 1 A A C O LYS HOH 188 229 1.46 1_555 1_455 1 A A O O HOH HOH 250 370 1.88 1_555 1_655 1 A A O O HOH HOH 262 360 2.07 1_555 1_655 17.061 0.17 0.00 0.05 0.07 0.00 -0.21 0.979 0.966 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT 0.17650 0.13990 0.14173 1.08 33.32 2405 47812 45678 5.0 95.48 0.922 0.021 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.029 0.032 0.80 0.80 1.20 PDB ENTRY 3f9k MAXIMUM LIKELIHOOD MASK 0.1304 1.08 33.32 186 1195 0 0 1009 0.020 0.020 1030 1.942 1.931 1397 5.609 5.000 128 38.130 26.667 45 12.373 15.000 184 0.121 0.200 161 0.013 0.021 758 8.439 3.000 1030 43.451 5.000 40 17.379 5.000 1155 0.273 0.226 1.107 158 3006 20 87.28 1.08 33.32 4MQ3 48083 47812 -3 -3 0.03 0.03 1 15.94 3.41 95.6 1.08 1.135 2.59 1 90.3 data collection MxCuBE phasing BALBES refinement REFMAC 5.6.0117 data reduction XDS data scaling XDS The 1.1 Angstrom Structure of Catalytic Core Domain of FIV Integrase 1 N N 2 N N A THR 95 A THR 39 HELX_P A HIS 110 A HIS 54 1 1 16 A ASN 125 A ASN 69 HELX_P A GLY 136 A GLY 80 1 2 12 A GLN 150 A GLN 94 HELX_P A LEU 168 A LEU 112 1 3 19 A PRO 169 A PRO 113 HELX_P A THR 171 A THR 115 5 4 3 A SER 173 A SER 117 HELX_P A LYS 187 A LYS 131 1 5 15 VIRAL PROTEIN alpha beta, Ribonuclease-H like motif, Nucleotidyltransferase, VIRAL PROTEIN POL_FIVPE UNP 1 904 P16088 GIWQMDCTHFDGKIILVGIHVESGYIWAQIISQETADCTVKAVLQLLSAHNVTELQTDNGPNFKNQKMEGVLNYMGVKHK FGIPGNPQSQALVENVNHTLKVWIQKFLPETTSLDNALSLAVHSLNFK 904 1031 4MQ3 61 188 P16088 A 1 5 132 1 expression tag GLY 57 4MQ3 A P16088 UNP 1 1 expression tag SER 58 4MQ3 A P16088 UNP 2 1 expression tag HIS 59 4MQ3 A P16088 UNP 3 1 expression tag MET 60 4MQ3 A P16088 UNP 4 1 PHE engineered mutation LYS 187 4MQ3 A P16088 UNP 1030 131 5 anti-parallel anti-parallel parallel parallel A ILE 86 A ILE 30 A ILE 91 A ILE 35 A LYS 73 A LYS 17 A HIS 80 A HIS 24 A ILE 62 A ILE 6 A PHE 70 A PHE 14 A GLU 114 A GLU 58 A ASP 118 A ASP 62 A LYS 138 A LYS 82 A GLY 142 A GLY 86 4 P 1 21 1