0.032462 0.000000 0.017461 -0.000000 0.012251 0.000000 0.000000 -0.000000 0.035091 0.000000 0.000000 0.000000 Liu, L.K. Finzel, B. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.000 118.280 90.000 30.805 81.626 32.358 C9 H11 N 133.190 1,2,3,4-tetrahydroisoquinoline non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C2 H6 O S 78.133 DIMETHYL SULFOXIDE non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N C Y 3 N C Y 4 N C Y 5 N C Y 6 N C Y 7 N C Y 8 N C N 9 N C N 10 N N N 11 N H N 12 N H N 13 N H N 14 N H N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N H N 22 N N N 23 S C N 24 N C N 25 N O N 26 N C N 27 N O N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N N N 36 S C N 37 N C N 38 N O N 39 N C N 40 N C N 41 N C N 42 N N N 43 N C N 44 N N N 45 N N N 46 N O N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N N N 63 S C N 64 N C N 65 N O N 66 N C N 67 N C N 68 N O N 69 N N N 70 N O N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N N N 80 S C N 81 N C N 82 N O N 83 N C N 84 N C N 85 N O N 86 N O N 87 N O N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 R C N 97 N C N 98 N O N 99 N C N 100 N S N 101 N O N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N S N 110 N O N 111 N C N 112 N C N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N N N 120 S C N 121 N C N 122 N O N 123 N C N 124 N C N 125 N C N 126 N O N 127 N N N 128 N O N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N N N 140 S C N 141 N C N 142 N O N 143 N C N 144 N C N 145 N C N 146 N O N 147 N O N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 N C N 160 N C N 161 N O N 162 N O N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N C N 169 N O N 170 N C N 171 N O N 172 N C N 173 N O N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N N N 183 S C N 184 N C N 185 N O N 186 N C Y 187 N C Y 188 N N Y 189 N C Y 190 N C Y 191 N N N 192 N O N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N O N 204 N H N 205 N H N 206 N N N 207 S C N 208 N C N 209 N O N 210 S C N 211 N C N 212 N C N 213 N C N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N N N 229 S C N 230 N C N 231 N O N 232 N C N 233 N C N 234 N C N 235 N C N 236 N O N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C N 255 N C N 256 N C N 257 N C N 258 N N N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N N N 276 S C N 277 N C N 278 N O N 279 N C N 280 N C N 281 N S N 282 N C N 283 N O N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N N N 296 S C N 297 N C N 298 N O N 299 N C Y 300 N C Y 301 N C Y 302 N C Y 303 N C Y 304 N C Y 305 N C N 306 N O N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N N N 319 S C N 320 N C N 321 N O N 322 N C N 323 N C N 324 N C N 325 N O N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N N N 336 S C N 337 N C N 338 N O N 339 N C N 340 N O N 341 N O N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N S N 350 N O N 351 N O N 352 N O N 353 N O N 354 N N N 355 S C N 356 N C N 357 N O N 358 R C N 359 N O N 360 N C N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N N N 372 S C N 373 N C N 374 N O N 375 N C Y 376 N C Y 377 N C Y 378 N C Y 379 N C Y 380 N C Y 381 N C N 382 N O N 383 N O N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N N N 396 S C N 397 N C N 398 N O N 399 N C N 400 N C N 401 N C N 402 N O N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H Y 1 N doub Y 2 N sing Y 3 N sing Y 4 N doub Y 5 N doub Y 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N doub N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N doub N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N doub N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N doub N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N doub N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N doub N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N doub N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing Y 184 N sing Y 185 N doub Y 186 N doub N 187 N sing Y 188 N sing N 189 N sing Y 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N doub N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N doub N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N doub N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N doub N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing Y 292 N doub Y 293 N sing Y 294 N sing N 295 N sing Y 296 N doub N 297 N sing Y 298 N doub N 299 N sing Y 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N doub N 335 N doub N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N doub N 361 N sing N 362 N sing N 363 N sing N 364 N sing Y 365 N doub Y 366 N sing Y 367 N sing N 368 N sing Y 369 N doub N 370 N sing Y 371 N doub N 372 N sing Y 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N doub N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing US J.Med.Chem. JMCMAR 0151 0022-2623 57 2714 2725 10.1021/jm5000276 24606063 Fragment-Based Identification of an Inducible Binding Site on Cell Surface Receptor CD44 for the Design of Protein-Carbohydrate Interaction Inhibitors. 2014 US Nat.Struct.Mol.Biol. 1545-9993 14 234 239 10.1038/nsmb1201 17293874 Structures of the Cd44-hyaluronan complex provide insight into a fundamental carbohydrate-protein interaction. 2007 10.2210/pdb4mrf/pdb pdb_00004mrf 100 1 PIXEL 2012-11-17 DECTRIS PILATUS 6M Si(111) SINGLE WAVELENGTH M x-ray 1 1.000 1.0 17-ID APS 1.000 SYNCHROTRON APS BEAMLINE 17-ID 16724.604 CD44 antigen HYALURONAN BINDING DOMAIN, RESIDUES 23-171 1 man polymer 78.133 DIMETHYL SULFOXIDE 1 syn non-polymer 92.094 GLYCEROL 1 syn non-polymer 133.190 1,2,3,4-tetrahydroisoquinoline 1 syn non-polymer 96.063 SULFATE ION 1 syn non-polymer 18.015 water 60 nat water Extracellular matrix receptor III, ECMR-III, GP90 lymphocyte homing/adhesion receptor, HUTCH-I, Hermes antigen, Hyaluronate receptor, Lymphocyte antigen 24, Ly-24, Phagocytic glycoprotein 1, PGP-1, Phagocytic glycoprotein I, PGP-I no no NQIDLNVTCRYAGVFHVEKNGRYSISRTEAADLCQAFNSTLPTMDQMKLALSKGFETCRYGFIEGNVVIPRIHPNAICAA NHTGVYILVTSNTSHYDTYCFNASAPPEEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDI NQIDLNVTCRYAGVFHVEKNGRYSISRTEAADLCQAFNSTLPTMDQMKLALSKGFETCRYGFIEGNVVIPRIHPNAICAA NHTGVYILVTSNTSHYDTYCFNASAPPEEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDI A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n mouse sample Cd44, Cd44 Ly-24, Ly-24 10090 Mus musculus 469008 Escherichia coli BL21(DE3) plasmid pMCSG7 1 2.14 42.58 VAPOR DIFFUSION, HANGING DROP 6.5 30% PEG MME 5000, 100 mM MES, 200 mM (NH4)2SO4, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 diffrn_detector chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq_dif struct_site repository Initial release Data collection Data collection Database references Derived calculations Refinement description 1 0 2014-04-16 1 1 2018-04-18 1 2 2023-09-20 _diffrn_detector.detector _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2013-09-17 REL REL DMS DIMETHYL SULFOXIDE GOL GLYCEROL 2CK 1,2,3,4-tetrahydroisoquinoline SO4 SULFATE ION HOH water 2JCP pdb entry 2JCP PDB experimental model DMS 1 2 DMS DMS 201 A GOL 1 3 GOL GOL 202 A DRG 1 4 2CK 2CK 203 A SO4 2 5 SO4 SO4 204 A HOH 1 6 HOH HOH 301 A HOH 2 6 HOH HOH 302 A HOH 3 6 HOH HOH 303 A HOH 4 6 HOH HOH 304 A HOH 5 6 HOH HOH 305 A HOH 6 6 HOH HOH 306 A HOH 7 6 HOH HOH 307 A HOH 8 6 HOH HOH 308 A HOH 9 6 HOH HOH 309 A HOH 10 6 HOH HOH 310 A HOH 11 6 HOH HOH 311 A HOH 12 6 HOH HOH 312 A HOH 13 6 HOH HOH 313 A HOH 14 6 HOH HOH 314 A HOH 15 6 HOH HOH 315 A HOH 16 6 HOH HOH 316 A HOH 17 6 HOH HOH 317 A HOH 18 6 HOH HOH 318 A HOH 19 6 HOH HOH 319 A HOH 20 6 HOH HOH 320 A HOH 21 6 HOH HOH 321 A HOH 22 6 HOH HOH 322 A HOH 23 6 HOH HOH 323 A HOH 24 6 HOH HOH 324 A HOH 25 6 HOH HOH 325 A HOH 26 6 HOH HOH 326 A HOH 27 6 HOH HOH 327 A HOH 28 6 HOH HOH 328 A HOH 29 6 HOH HOH 329 A HOH 30 6 HOH HOH 330 A HOH 31 6 HOH HOH 331 A HOH 32 6 HOH HOH 332 A HOH 33 6 HOH HOH 333 A HOH 34 6 HOH HOH 334 A HOH 35 6 HOH HOH 335 A HOH 36 6 HOH HOH 336 A HOH 37 6 HOH HOH 337 A HOH 38 6 HOH HOH 338 A HOH 39 6 HOH HOH 339 A HOH 40 6 HOH HOH 340 A HOH 41 6 HOH HOH 341 A HOH 42 6 HOH HOH 342 A HOH 43 6 HOH HOH 343 A HOH 44 6 HOH HOH 344 A HOH 45 6 HOH HOH 345 A HOH 46 6 HOH HOH 346 A HOH 47 6 HOH HOH 347 A HOH 48 6 HOH HOH 348 A HOH 49 6 HOH HOH 349 A HOH 50 6 HOH HOH 350 A HOH 51 6 HOH HOH 351 A HOH 52 6 HOH HOH 352 A HOH 53 6 HOH HOH 353 A HOH 54 6 HOH HOH 354 A HOH 55 6 HOH HOH 355 A HOH 56 6 HOH HOH 356 A HOH 57 6 HOH HOH 357 A HOH 58 6 HOH HOH 358 A HOH 59 6 HOH HOH 359 A HOH 60 6 HOH HOH 360 A 32.190 2.500 2.500 40.810 40.810 Phaser MODE: MR_AUTO ASN 24 n 1 ASN 24 A GLN 25 n 2 GLN 25 A ILE 26 n 3 ILE 26 A ASP 27 n 4 ASP 27 A LEU 28 n 5 LEU 28 A ASN 29 n 6 ASN 29 A VAL 30 n 7 VAL 30 A THR 31 n 8 THR 31 A CYS 32 n 9 CYS 32 A ARG 33 n 10 ARG 33 A TYR 34 n 11 TYR 34 A ALA 35 n 12 ALA 35 A GLY 36 n 13 GLY 36 A VAL 37 n 14 VAL 37 A PHE 38 n 15 PHE 38 A HIS 39 n 16 HIS 39 A VAL 40 n 17 VAL 40 A GLU 41 n 18 GLU 41 A LYS 42 n 19 LYS 42 A ASN 43 n 20 ASN 43 A GLY 44 n 21 GLY 44 A ARG 45 n 22 ARG 45 A TYR 46 n 23 TYR 46 A SER 47 n 24 SER 47 A ILE 48 n 25 ILE 48 A SER 49 n 26 SER 49 A ARG 50 n 27 ARG 50 A THR 51 n 28 THR 51 A GLU 52 n 29 GLU 52 A ALA 53 n 30 ALA 53 A ALA 54 n 31 ALA 54 A ASP 55 n 32 ASP 55 A LEU 56 n 33 LEU 56 A CYS 57 n 34 CYS 57 A GLN 58 n 35 GLN 58 A ALA 59 n 36 ALA 59 A PHE 60 n 37 PHE 60 A ASN 61 n 38 ASN 61 A SER 62 n 39 SER 62 A THR 63 n 40 THR 63 A LEU 64 n 41 LEU 64 A PRO 65 n 42 PRO 65 A THR 66 n 43 THR 66 A MET 67 n 44 MET 67 A ASP 68 n 45 ASP 68 A GLN 69 n 46 GLN 69 A MET 70 n 47 MET 70 A LYS 71 n 48 LYS 71 A LEU 72 n 49 LEU 72 A ALA 73 n 50 ALA 73 A LEU 74 n 51 LEU 74 A SER 75 n 52 SER 75 A LYS 76 n 53 LYS 76 A GLY 77 n 54 GLY 77 A PHE 78 n 55 PHE 78 A GLU 79 n 56 GLU 79 A THR 80 n 57 THR 80 A CYS 81 n 58 CYS 81 A ARG 82 n 59 ARG 82 A TYR 83 n 60 TYR 83 A GLY 84 n 61 GLY 84 A PHE 85 n 62 PHE 85 A ILE 86 n 63 ILE 86 A GLU 87 n 64 GLU 87 A GLY 88 n 65 GLY 88 A ASN 89 n 66 ASN 89 A VAL 90 n 67 VAL 90 A VAL 91 n 68 VAL 91 A ILE 92 n 69 ILE 92 A PRO 93 n 70 PRO 93 A ARG 94 n 71 ARG 94 A ILE 95 n 72 ILE 95 A HIS 96 n 73 HIS 96 A PRO 97 n 74 PRO 97 A ASN 98 n 75 ASN 98 A ALA 99 n 76 ALA 99 A ILE 100 n 77 ILE 100 A CYS 101 n 78 CYS 101 A ALA 102 n 79 ALA 102 A ALA 103 n 80 ALA 103 A ASN 104 n 81 ASN 104 A HIS 105 n 82 HIS 105 A THR 106 n 83 THR 106 A GLY 107 n 84 GLY 107 A VAL 108 n 85 VAL 108 A TYR 109 n 86 TYR 109 A ILE 110 n 87 ILE 110 A LEU 111 n 88 LEU 111 A VAL 112 n 89 VAL 112 A THR 113 n 90 THR 113 A SER 114 n 91 SER 114 A ASN 115 n 92 ASN 115 A THR 116 n 93 THR 116 A SER 117 n 94 SER 117 A HIS 118 n 95 HIS 118 A TYR 119 n 96 TYR 119 A ASP 120 n 97 ASP 120 A THR 121 n 98 THR 121 A TYR 122 n 99 TYR 122 A CYS 123 n 100 CYS 123 A PHE 124 n 101 PHE 124 A ASN 125 n 102 ASN 125 A ALA 126 n 103 ALA 126 A SER 127 n 104 SER 127 A ALA 128 n 105 ALA 128 A PRO 129 n 106 PRO 129 A PRO 130 n 107 PRO 130 A GLU 131 n 108 GLU 131 A GLU 132 n 109 GLU 132 A ASP 133 n 110 ASP 133 A CYS 134 n 111 CYS 134 A THR 135 n 112 THR 135 A SER 136 n 113 SER 136 A VAL 137 n 114 VAL 137 A THR 138 n 115 THR 138 A ASP 139 n 116 ASP 139 A LEU 140 n 117 LEU 140 A PRO 141 n 118 PRO 141 A ASN 142 n 119 ASN 142 A SER 143 n 120 SER 143 A PHE 144 n 121 PHE 144 A ASP 145 n 122 ASP 145 A GLY 146 n 123 GLY 146 A PRO 147 n 124 PRO 147 A VAL 148 n 125 VAL 148 A THR 149 n 126 THR 149 A ILE 150 n 127 ILE 150 A THR 151 n 128 THR 151 A ILE 152 n 129 ILE 152 A VAL 153 n 130 VAL 153 A ASN 154 n 131 ASN 154 A ARG 155 n 132 ARG 155 A ASP 156 n 133 ASP 156 A GLY 157 n 134 GLY 157 A THR 158 n 135 THR 158 A ARG 159 n 136 ARG 159 A TYR 160 n 137 TYR 160 A SER 161 n 138 SER 161 A LYS 162 n 139 LYS 162 A LYS 163 n 140 LYS 163 A GLY 164 n 141 GLY 164 A GLU 165 n 142 GLU 165 A TYR 166 n 143 TYR 166 A ARG 167 n 144 ARG 167 A THR 168 n 145 THR 168 A HIS 169 n 146 HIS 169 A GLN 170 n 147 GLN 170 A GLU 171 n 148 GLU 171 A ASP 172 n 149 ASP 172 A ILE 173 n 150 ILE 173 A author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLY 107 A O GLY 84 A N ARG 94 A N ARG 71 A O VAL 91 A O VAL 68 A N GLY 84 A N GLY 61 A N PHE 85 A N PHE 62 A O TYR 122 A O TYR 99 A O THR 121 A O THR 98 A N VAL 40 A N VAL 17 A O GLU 41 A O GLU 18 A N ASN 29 A N ASN 6 A N LEU 28 A N LEU 5 A O THR 151 A O THR 128 A N ILE 150 A N ILE 127 A O LYS 162 A O LYS 139 A N ARG 33 A N ARG 10 A O ASP 133 A O ASP 110 1 3.39 0.50 120.30 123.69 A A A NE CZ NH1 ARG ARG ARG 50 50 50 A A A N 1 -3.83 0.50 120.30 116.47 A A A NE CZ NH2 ARG ARG ARG 50 50 50 A A A N 1 3.26 0.50 120.30 123.56 A A A NE CZ NH1 ARG ARG ARG 159 159 159 N 1 -6.24 0.50 120.30 114.06 A A A NE CZ NH2 ARG ARG ARG 159 159 159 N 1 A SER 47 -155.25 15.24 1 A GLU 131 -119.43 -133.99 1 A LEU 140 -119.07 78.99 46.710 13.8573 2.770 -0.6700 0.0000 -0.5500 0.4600 0.0000 -0.3000 0.9520 0.9210 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY 0.2150 0.1801 0.1819 1.5500 40.8 1028 20133 5.1000 98.7500 0.2215 0.1864 1.000 0.500 0.8846 1.3850 0.0520 0.0886 0.0898 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.0890 0.0900 0.8000 0.8000 1.4000 pdb entry 2JCP MAXIMUM LIKELIHOOD MASK 1.5500 40.8 60 1256 25 0 1171 0.016 0.021 1304 1.523 1.952 1786 7.020 5.000 167 36.266 23.810 63 11.870 15.000 203 17.972 15.000 10 0.109 0.200 196 0.008 0.021 1026 1.014 1.500 802 1.727 2.000 1320 2.711 3.000 502 4.373 4.500 466 0.2160 0.1790 1.5900 59 1252 1311 1252 20 92.0600 21.5 1.55 40.8 4MRF 20312 20192 0.031 0.042 1 22.1 3.2 98.8 0.085 1.550 1.630 8.800 7199 2840 0.085 1 2.500 95.500 0.074 1.630 1.730 9.800 9253 2783 0.074 1 3.300 99.900 0.062 1.730 1.850 11.500 8586 2629 0.062 1 3.300 99.600 0.045 1.850 2.000 15.500 8266 2483 0.045 1 3.300 99.500 0.040 2.000 2.190 17.200 7226 2252 0.040 1 3.200 99.500 0.033 2.190 2.450 20.300 6577 2024 0.033 1 3.200 99.400 0.029 2.450 2.830 22.800 5895 1816 0.029 1 3.200 99.000 0.026 2.830 3.470 24.000 4990 1513 0.026 1 3.300 98.900 0.024 3.470 4.900 25.000 3730 1187 0.024 1 3.100 98.600 0.024 4.900 40.813 25.800 2156 665 0.024 1 3.200 98.800 data scaling Phil R. Evans pre@mrc-lmb.cam.ac.uk 2010/01/06 Fortran_77 http://www.ccp4.ac.uk/dist/html/scala.html SCALA other 3.3.16 phasing Randy J. Read cimr-phaser@lists.cam.ac.uk Wed Jun 16 18:01:28 2010 http://www-structmed.cimr.cam.ac.uk/phaser/ PHASER program 2.1.4 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data collection JDirector data reduction XDS Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N A SER 49 A SER 26 HELX_P A PHE 60 A PHE 37 1 1 12 A THR 66 A THR 43 HELX_P A LYS 76 A LYS 53 1 2 11 A CYS 101 A CYS 78 HELX_P A HIS 105 A HIS 82 5 3 5 A HIS 169 A HIS 146 HELX_P A ILE 173 A ILE 150 5 4 5 disulf 2.067 A CYS 32 A SG CYS 9 1_555 A CYS 134 A SG CYS 111 1_555 disulf 2.123 A CYS 57 A SG CYS 34 1_555 A CYS 123 A SG CYS 100 1_555 disulf 2.060 A CYS 81 A SG CYS 58 1_555 A CYS 101 A SG CYS 78 1_555 Cell adhesion/inhibitor Link module, Cell receptor, Hyaluronan binding, Cell surface, Cell adhesion-inhibitor complex CD44_MOUSE UNP 1 23 P15379 QIDLNVTCRYAGVFHVEKNGRYSISRTEAADLCQAFNSTLPTMDQMKLALSKGFETCRYGFIEGNVVIPRIHPNAICAAN HTGVYILVTSNTSHYDTYCFNASAPPEEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDI 23 171 4MRF 25 173 P15379 A 1 2 150 1 expression tag ASN 24 4MRF A P15379 UNP 1 8 2 anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A GLY 107 A GLY 84 A ILE 110 A ILE 87 A VAL 90 A VAL 67 A ARG 94 A ARG 71 A GLY 84 A GLY 61 A PHE 85 A PHE 62 A ASP 120 A ASP 97 A PHE 124 A PHE 101 A VAL 37 A VAL 14 A LYS 42 A LYS 19 A GLN 25 A GLN 2 A VAL 30 A VAL 7 A PHE 144 A PHE 121 A ASN 154 A ASN 131 A ARG 159 A ARG 136 A GLU 165 A GLU 142 A ARG 33 A ARG 10 A TYR 34 A TYR 11 A GLU 132 A GLU 109 A ASP 133 A ASP 110 BINDING SITE FOR RESIDUE DMS A 201 A DMS 201 Software 8 BINDING SITE FOR RESIDUE GOL A 202 A GOL 202 Software 9 BINDING SITE FOR RESIDUE 2CK A 203 A 2CK 203 Software 7 BINDING SITE FOR RESIDUE SO4 A 204 A SO4 204 Software 6 A CYS 32 A CYS 9 8 1_555 A ASN 89 A ASN 66 8 1_554 A CYS 134 A CYS 111 8 1_555 A SER 136 A SER 113 8 1_555 A ARG 155 A ARG 132 8 1_555 A ASP 156 A ASP 133 8 1_555 A HOH 321 F HOH 8 1_555 A HOH 336 F HOH 8 1_554 A TYR 46 A TYR 23 9 1_555 A CYS 81 A CYS 58 9 1_555 A TYR 83 A TYR 60 9 1_555 A ILE 92 A ILE 69 9 1_555 A ILE 100 A ILE 77 9 1_555 A CYS 101 A CYS 78 9 1_555 A ALA 102 A ALA 79 9 1_555 A GLU 131 A GLU 108 9 1_656 A HOH 359 F HOH 9 1_656 A ASN 29 A ASN 6 7 1_555 A VAL 30 A VAL 7 7 1_555 A GLU 41 A GLU 18 7 1_555 A ASP 68 A ASP 45 7 1_655 A VAL 153 A VAL 130 7 1_555 A ASN 154 A ASN 131 7 1_555 A ARG 155 A ARG 132 7 1_555 A ARG 33 A ARG 10 6 1_555 A PHE 38 A PHE 15 6 1_555 A PHE 60 A PHE 37 6 1_555 A SER 62 A SER 39 6 1_555 A ASN 125 A ASN 102 6 1_555 A VAL 137 A VAL 114 6 1_555 4 P 1 21 1