0.027493 0.000000 0.000000 0.000000 0.027493 0.000000 0.000000 0.000000 0.016880 0.00000 0.00000 0.00000 Mcpherson, M. Tomlinson, D. Owen, R.L. Nettleship, J.E. Owens, R.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 36.373 36.373 59.243 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N O N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 R C N 295 N O N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N N Y 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C Y 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C N 345 N O N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C N 363 N C N 364 N C N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N sing Y 313 N doub N 314 N sing Y 315 N doub N 316 N sing Y 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing Y 332 N doub Y 333 N sing Y 334 N sing N 335 N sing Y 336 N doub N 337 N sing Y 338 N doub N 339 N sing Y 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing UK Protein Eng.Des.Sel. 1741-0126 27 145 155 10.1093/protein/gzu007 24668773 Adhiron: a stable and versatile peptide display scaffold for molecular recognition applications. 2014 10.2210/pdb4n6u/pdb pdb_00004n6u 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 PIXEL 2013-02-09 DECTRIS PILATUS 6M-F Si(111) SINGLE WAVELENGTH M x-ray 1 0.9686 1.0 I24 Diamond 0.9686 SYNCHROTRON DIAMOND BEAMLINE I24 9286.674 Adhiron 1 man polymer 18.015 water 33 nat water no no ENSLEIEELARFAVDEHNKKENALLEFVRVVKAKEQVVAGTMYYLTLEAKDGGKKKLYEAKVWVKPWENFKELQEFKPV ENSLEIEELARFAVDEHNKKENALLEFVRVVKAKEQVVAGTMYYLTLEAKDGGKKKLYEAKVWVKPWENFKELQEFKPV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample PHYTOCYSTATIN 32630 ARTIFICIAL GENE 469008 Escherichia coli BL21(DE3) PLASMID pET11 1 2.11 41.70 VAPOR DIFFUSION, SITTING DROP 5.0 PACTpremier (D02), 0.1 M MMT System pH 5.0, 25.0% w/v Polyethylene Glycol 1500, VAPOR DIFFUSION, SITTING DROP, temperature 280K 280 chem_comp_atom chem_comp_bond database_2 repository Initial release Database references Data collection Database references 1 0 2014-04-09 1 1 2014-05-14 1 2 2024-02-28 _database_2.pdbx_DOI _database_2.pdbx_database_accession RCSB Y RCSB 2013-10-14 REL REL HOH water HOH 1 2 HOH HOH 201 A HOH 2 2 HOH HOH 202 A HOH 3 2 HOH HOH 203 A HOH 4 2 HOH HOH 204 A HOH 5 2 HOH HOH 205 A HOH 6 2 HOH HOH 206 A HOH 7 2 HOH HOH 207 A HOH 8 2 HOH HOH 208 A HOH 9 2 HOH HOH 209 A HOH 10 2 HOH HOH 210 A HOH 11 2 HOH HOH 211 A HOH 12 2 HOH HOH 212 A HOH 13 2 HOH HOH 213 A HOH 14 2 HOH HOH 214 A HOH 15 2 HOH HOH 215 A HOH 16 2 HOH HOH 216 A HOH 17 2 HOH HOH 217 A HOH 18 2 HOH HOH 218 A HOH 19 2 HOH HOH 219 A HOH 20 2 HOH HOH 220 A HOH 21 2 HOH HOH 221 A HOH 22 2 HOH HOH 222 A HOH 23 2 HOH HOH 223 A HOH 24 2 HOH HOH 224 A HOH 25 2 HOH HOH 225 A HOH 26 2 HOH HOH 226 A HOH 27 2 HOH HOH 227 A HOH 28 2 HOH HOH 228 A HOH 29 2 HOH HOH 229 A HOH 30 2 HOH HOH 230 A HOH 31 2 HOH HOH 231 A HOH 32 2 HOH HOH 232 A HOH 33 2 HOH HOH 233 A GLU 32 n 1 GLU 32 A ASN 33 n 2 ASN 33 A SER 34 n 3 SER 34 A LEU 35 n 4 LEU 35 A GLU 36 n 5 GLU 36 A ILE 37 n 6 ILE 37 A GLU 38 n 7 GLU 38 A GLU 39 n 8 GLU 39 A LEU 40 n 9 LEU 40 A ALA 41 n 10 ALA 41 A ARG 42 n 11 ARG 42 A PHE 43 n 12 PHE 43 A ALA 44 n 13 ALA 44 A VAL 45 n 14 VAL 45 A ASP 46 n 15 ASP 46 A GLU 47 n 16 GLU 47 A HIS 48 n 17 HIS 48 A ASN 49 n 18 ASN 49 A LYS 50 n 19 LYS 50 A LYS 51 n 20 LYS 51 A GLU 52 n 21 GLU 52 A ASN 53 n 22 ASN 53 A ALA 54 n 23 ALA 54 A LEU 55 n 24 LEU 55 A LEU 56 n 25 LEU 56 A GLU 57 n 26 GLU 57 A PHE 58 n 27 PHE 58 A VAL 59 n 28 VAL 59 A ARG 60 n 29 ARG 60 A VAL 61 n 30 VAL 61 A VAL 62 n 31 VAL 62 A LYS 63 n 32 LYS 63 A ALA 64 n 33 ALA 64 A LYS 65 n 34 LYS 65 A GLU 66 n 35 GLU 66 A GLN 67 n 36 GLN 67 A VAL 68 n 37 VAL 68 A VAL 69 n 38 VAL 69 A ALA 70 n 39 ALA 70 A GLY 71 n 40 GLY 71 A THR 72 n 41 THR 72 A MET 73 n 42 MET 73 A TYR 74 n 43 TYR 74 A TYR 75 n 44 TYR 75 A LEU 76 n 45 LEU 76 A THR 77 n 46 THR 77 A LEU 78 n 47 LEU 78 A GLU 79 n 48 GLU 79 A ALA 80 n 49 ALA 80 A LYS 81 n 50 LYS 81 A ASP 82 n 51 ASP 82 A GLY 83 n 52 GLY 83 A GLY 84 n 53 GLY 84 A LYS 85 n 54 LYS 85 A LYS 86 n 55 LYS 86 A LYS 87 n 56 LYS 87 A LEU 88 n 57 LEU 88 A TYR 89 n 58 TYR 89 A GLU 90 n 59 GLU 90 A ALA 91 n 60 ALA 91 A LYS 92 n 61 LYS 92 A VAL 93 n 62 VAL 93 A TRP 94 n 63 TRP 94 A VAL 95 n 64 VAL 95 A LYS 96 n 65 LYS 96 A PRO 97 n 66 PRO 97 A TRP 98 n 67 TRP 98 A GLU 99 n 68 GLU 99 A ASN 100 n 69 ASN 100 A PHE 101 n 70 PHE 101 A LYS 102 n 71 LYS 102 A GLU 103 n 72 GLU 103 A LEU 104 n 73 LEU 104 A GLN 105 n 74 GLN 105 A GLU 106 n 75 GLU 106 A PHE 107 n 76 PHE 107 A LYS 108 n 77 LYS 108 A PRO 109 n 78 PRO 109 A VAL 110 n 79 VAL 110 A 8.7712 2.2937 -1.3726 2.3076 0.1019 3.8431 -0.3380 0.5714 0.2150 -0.1799 0.3167 0.2020 -0.1179 -0.3838 0.0802 0.2464 0.0013 -0.0167 0.3396 0.0963 0.2463 refined 2.9610 24.8928 -7.3724 X-RAY DIFFRACTION 5.3599 0.5091 -2.0963 4.7128 0.7263 6.6644 0.0124 -0.0794 0.0747 0.2774 -0.0770 -0.3370 0.1091 0.1122 -0.0697 0.2282 -0.0157 -0.0241 0.2349 0.0584 0.2629 refined 7.2567 20.5703 -2.6964 X-RAY DIFFRACTION 7.8298 -3.1557 -6.6845 4.5539 4.0977 6.2929 -0.4928 0.5534 -0.5742 0.2449 -0.4504 0.1431 0.9094 -0.8306 0.6906 0.2722 -0.1001 0.0014 0.3059 -0.0100 0.3019 refined 5.6232 14.8622 -8.9636 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 chain 'A' and (resseq 32:62) X-RAY DIFFRACTION 2 chain 'A' and (resseq 63:96) X-RAY DIFFRACTION 3 chain 'A' and (resseq 97:110) author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 62 A N VAL 31 A O THR 77 A O THR 46 A N THR 72 A N THR 41 A O VAL 95 A O VAL 64 A N GLU 90 A N GLU 59 A O LYS 108 A O LYS 77 1 A A OD1 O ASP HOH 46 218 2.18 1 A A OE1 OH GLU TYR 39 75 2.19 1_555 4_564 1 A VAL 59 -105.17 -64.27 1 A VAL 69 -140.51 -134.07 1 A ASP 82 -79.81 -90.80 -1.7118 -0.0000 0.0000 -1.7118 0.0000 3.4236 0.2477 0.1839 0.1866 2.251 36.373 324 6985 6985 4.64 97.22 0.39 random 1 1.24 MOLECULAR REPLACEMENT 25.94 0.60 0.90 ML FLAT BULK SOLVENT MODEL 38.218 0.351 2.251 36.373 33 688 0 0 655 0.009 668 1.284 897 16.929 255 0.088 96 0.003 113 0.3351 0.2551 2.8364 180 3301 97.00 0.2136 0.1601 36.3777 144 3360 97.00 33.7 2.25 37 4N6U 3713 3709 2.0 2.0 0.102 1 8.2 3.7 99.9 0.722 2.25 2.32 1.8 339 1 3.8 100.0 data collection GDA phasing PHASER refinement PHENIX (phenix.refine: 1.7.3_928) data reduction XDS data scaling Aimless Adhiron: a stable and versatile peptide display scaffold - truncated adhiron 1 N N 2 N N A ASN 33 A ASN 2 HELX_P A ASN 53 A ASN 22 1 1 21 DE NOVO PROTEIN protein scaffold, CONSENSUS PROTEIN, DE NOVO PROTEIN 4N6U PDB 1 4N6U 32 110 4N6U 32 110 4N6U A 1 1 79 4 anti-parallel anti-parallel anti-parallel A GLU 57 A GLU 26 A VAL 68 A VAL 37 A THR 72 A THR 41 A LYS 81 A LYS 50 A LYS 86 A LYS 55 A LYS 96 A LYS 65 A PHE 101 A PHE 70 A PRO 109 A PRO 78 76 P 41