0.007584
0.000000
0.000828
0.000000
0.021843
0.000000
0.000000
0.000000
0.022309
0.000000
0.000000
0.000000
Abskharon, R.N.N.
Giachin, G.
Wohlkonig, A.
Soror, S.H.
Pardon, E.
Legname, G.
Steyaert, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
96.230
90.000
131.857
45.781
45.092
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
J.Am.Chem.Soc.
JACSAT
0004
0002-7863
136
937
944
10.1021/ja407527p
24400836
Probing the N-Terminal beta-Sheet Conversion in the Crystal Structure of the Human Prion Protein Bound to a Nanobody.
2014
10.2210/pdb4n9o/pdb
pdb_00004n9o
100
1
CCD
2010-07-22
ADSC QUANTUM 315r
double crystal monochromator
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
BM30A
ESRF
1.0000
SYNCHROTRON
ESRF BEAMLINE BM30A
16168.997
Major prion protein
C-terminal residues 90-231
1
man
polymer
14248.748
Nanobody Nb484
Nb484
1
man
polymer
18.015
water
171
nat
water
PrP, ASCR, PrP27-30, PrP33-35C
no
no
GQGGGTHSQWNKPSKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEY
SNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQRGSS
GQGGGTHSQWNKPSKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEY
SNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQRGSS
A
polypeptide(L)
no
no
AAQLQESGGGLVQPGGSLRLSCAASGRTFSSYNMGWFRQAPGKGREFVASITSSGDKSDYTDSVKGRFTISRDNAKNTMY
LQMNNLKPEDTATYYCARGLGIYIIRARGGYDHWGQGTQVTVSSHHHHHH
AAQLQESGGGLVQPGGSLRLSCAASGRTFSSYNMGWFRQAPGKGREFVASITSSGDKSDYTDSVKGRFTISRDNAKNTMY
LQMNNLKPEDTATYYCARGLGIYIIRARGGYDHWGQGTQVTVSSHHHHHH
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
PRNP, PRIP, PRP
9606
Homo sapiens
562
Escherichia coli
sample
9844
Lama glama
562
Escherichia coli
1
2.22
44.69
VAPOR DIFFUSION, SITTING DROP
7.0
0.1 M HEPES-Na pH 7, 15% PEG20000, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Database references
Data collection
Database references
Refinement description
1
0
2014-01-22
1
1
2014-02-05
1
2
2023-09-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
RCSB
2013-10-21
REL
REL
HOH
water
2W9E
PDB
experimental model
HOH
1
3
HOH
HOH
301
A
HOH
2
3
HOH
HOH
302
A
HOH
3
3
HOH
HOH
303
A
HOH
6
3
HOH
HOH
304
A
HOH
7
3
HOH
HOH
305
A
HOH
8
3
HOH
HOH
306
A
HOH
9
3
HOH
HOH
307
A
HOH
11
3
HOH
HOH
308
A
HOH
15
3
HOH
HOH
309
A
HOH
18
3
HOH
HOH
310
A
HOH
19
3
HOH
HOH
311
A
HOH
20
3
HOH
HOH
312
A
HOH
21
3
HOH
HOH
313
A
HOH
22
3
HOH
HOH
314
A
HOH
26
3
HOH
HOH
315
A
HOH
30
3
HOH
HOH
316
A
HOH
31
3
HOH
HOH
317
A
HOH
32
3
HOH
HOH
318
A
HOH
33
3
HOH
HOH
319
A
HOH
37
3
HOH
HOH
320
A
HOH
38
3
HOH
HOH
321
A
HOH
40
3
HOH
HOH
322
A
HOH
43
3
HOH
HOH
323
A
HOH
45
3
HOH
HOH
324
A
HOH
47
3
HOH
HOH
325
A
HOH
49
3
HOH
HOH
326
A
HOH
52
3
HOH
HOH
327
A
HOH
56
3
HOH
HOH
328
A
HOH
58
3
HOH
HOH
329
A
HOH
59
3
HOH
HOH
330
A
HOH
60
3
HOH
HOH
331
A
HOH
62
3
HOH
HOH
332
A
HOH
63
3
HOH
HOH
333
A
HOH
64
3
HOH
HOH
334
A
HOH
65
3
HOH
HOH
335
A
HOH
66
3
HOH
HOH
336
A
HOH
67
3
HOH
HOH
337
A
HOH
71
3
HOH
HOH
338
A
HOH
74
3
HOH
HOH
339
A
HOH
75
3
HOH
HOH
340
A
HOH
76
3
HOH
HOH
341
A
HOH
77
3
HOH
HOH
342
A
HOH
79
3
HOH
HOH
343
A
HOH
80
3
HOH
HOH
344
A
HOH
82
3
HOH
HOH
345
A
HOH
83
3
HOH
HOH
346
A
HOH
87
3
HOH
HOH
347
A
HOH
90
3
HOH
HOH
348
A
HOH
91
3
HOH
HOH
349
A
HOH
92
3
HOH
HOH
350
A
HOH
93
3
HOH
HOH
351
A
HOH
94
3
HOH
HOH
352
A
HOH
96
3
HOH
HOH
353
A
HOH
99
3
HOH
HOH
354
A
HOH
104
3
HOH
HOH
355
A
HOH
106
3
HOH
HOH
356
A
HOH
109
3
HOH
HOH
357
A
HOH
113
3
HOH
HOH
358
A
HOH
115
3
HOH
HOH
359
A
HOH
117
3
HOH
HOH
360
A
HOH
118
3
HOH
HOH
361
A
HOH
119
3
HOH
HOH
362
A
HOH
120
3
HOH
HOH
363
A
HOH
125
3
HOH
HOH
364
A
HOH
126
3
HOH
HOH
365
A
HOH
128
3
HOH
HOH
366
A
HOH
131
3
HOH
HOH
367
A
HOH
132
3
HOH
HOH
368
A
HOH
137
3
HOH
HOH
369
A
HOH
138
3
HOH
HOH
370
A
HOH
147
3
HOH
HOH
371
A
HOH
148
3
HOH
HOH
372
A
HOH
150
3
HOH
HOH
373
A
HOH
154
3
HOH
HOH
374
A
HOH
155
3
HOH
HOH
375
A
HOH
157
3
HOH
HOH
376
A
HOH
161
3
HOH
HOH
377
A
HOH
162
3
HOH
HOH
378
A
HOH
163
3
HOH
HOH
379
A
HOH
164
3
HOH
HOH
380
A
HOH
165
3
HOH
HOH
381
A
HOH
168
3
HOH
HOH
382
A
HOH
170
3
HOH
HOH
383
A
HOH
171
3
HOH
HOH
384
A
HOH
4
3
HOH
HOH
201
B
HOH
5
3
HOH
HOH
202
B
HOH
10
3
HOH
HOH
203
B
HOH
12
3
HOH
HOH
204
B
HOH
13
3
HOH
HOH
205
B
HOH
14
3
HOH
HOH
206
B
HOH
16
3
HOH
HOH
207
B
HOH
17
3
HOH
HOH
208
B
HOH
23
3
HOH
HOH
209
B
HOH
24
3
HOH
HOH
210
B
HOH
25
3
HOH
HOH
211
B
HOH
27
3
HOH
HOH
212
B
HOH
28
3
HOH
HOH
213
B
HOH
29
3
HOH
HOH
214
B
HOH
34
3
HOH
HOH
215
B
HOH
35
3
HOH
HOH
216
B
HOH
36
3
HOH
HOH
217
B
HOH
39
3
HOH
HOH
218
B
HOH
41
3
HOH
HOH
219
B
HOH
42
3
HOH
HOH
220
B
HOH
44
3
HOH
HOH
221
B
HOH
46
3
HOH
HOH
222
B
HOH
48
3
HOH
HOH
223
B
HOH
50
3
HOH
HOH
224
B
HOH
51
3
HOH
HOH
225
B
HOH
53
3
HOH
HOH
226
B
HOH
54
3
HOH
HOH
227
B
HOH
55
3
HOH
HOH
228
B
HOH
57
3
HOH
HOH
229
B
HOH
61
3
HOH
HOH
230
B
HOH
68
3
HOH
HOH
231
B
HOH
69
3
HOH
HOH
232
B
HOH
70
3
HOH
HOH
233
B
HOH
72
3
HOH
HOH
234
B
HOH
73
3
HOH
HOH
235
B
HOH
78
3
HOH
HOH
236
B
HOH
81
3
HOH
HOH
237
B
HOH
84
3
HOH
HOH
238
B
HOH
85
3
HOH
HOH
239
B
HOH
86
3
HOH
HOH
240
B
HOH
88
3
HOH
HOH
241
B
HOH
89
3
HOH
HOH
242
B
HOH
95
3
HOH
HOH
243
B
HOH
97
3
HOH
HOH
244
B
HOH
98
3
HOH
HOH
245
B
HOH
100
3
HOH
HOH
246
B
HOH
101
3
HOH
HOH
247
B
HOH
102
3
HOH
HOH
248
B
HOH
103
3
HOH
HOH
249
B
HOH
105
3
HOH
HOH
250
B
HOH
107
3
HOH
HOH
251
B
HOH
108
3
HOH
HOH
252
B
HOH
110
3
HOH
HOH
253
B
HOH
111
3
HOH
HOH
254
B
HOH
112
3
HOH
HOH
255
B
HOH
114
3
HOH
HOH
256
B
HOH
116
3
HOH
HOH
257
B
HOH
121
3
HOH
HOH
258
B
HOH
122
3
HOH
HOH
259
B
HOH
123
3
HOH
HOH
260
B
HOH
124
3
HOH
HOH
261
B
HOH
127
3
HOH
HOH
262
B
HOH
129
3
HOH
HOH
263
B
HOH
130
3
HOH
HOH
264
B
HOH
133
3
HOH
HOH
265
B
HOH
134
3
HOH
HOH
266
B
HOH
135
3
HOH
HOH
267
B
HOH
136
3
HOH
HOH
268
B
HOH
139
3
HOH
HOH
269
B
HOH
140
3
HOH
HOH
270
B
HOH
141
3
HOH
HOH
271
B
HOH
142
3
HOH
HOH
272
B
HOH
143
3
HOH
HOH
273
B
HOH
144
3
HOH
HOH
274
B
HOH
145
3
HOH
HOH
275
B
HOH
146
3
HOH
HOH
276
B
HOH
149
3
HOH
HOH
277
B
HOH
151
3
HOH
HOH
278
B
HOH
152
3
HOH
HOH
279
B
HOH
153
3
HOH
HOH
280
B
HOH
156
3
HOH
HOH
281
B
HOH
158
3
HOH
HOH
282
B
HOH
159
3
HOH
HOH
283
B
HOH
160
3
HOH
HOH
284
B
HOH
166
3
HOH
HOH
285
B
HOH
167
3
HOH
HOH
286
B
HOH
169
3
HOH
HOH
287
B
57.150
2.500
2.500
25.180
25.180
Phaser MODE: MR_AUTO
n
1
90
A
n
2
91
A
n
3
92
A
n
4
93
A
n
5
94
A
n
6
95
A
n
7
96
A
n
8
97
A
n
9
98
A
n
10
99
A
n
11
100
A
n
12
101
A
n
13
102
A
n
14
103
A
n
15
104
A
n
16
105
A
n
17
106
A
n
18
107
A
n
19
108
A
n
20
109
A
n
21
110
A
n
22
111
A
n
23
112
A
n
24
113
A
n
25
114
A
n
26
115
A
n
27
116
A
n
28
117
A
ALA
118
n
29
ALA
118
A
GLY
119
n
30
GLY
119
A
ALA
120
n
31
ALA
120
A
VAL
121
n
32
VAL
121
A
VAL
122
n
33
VAL
122
A
GLY
123
n
34
GLY
123
A
GLY
124
n
35
GLY
124
A
LEU
125
n
36
LEU
125
A
GLY
126
n
37
GLY
126
A
GLY
127
n
38
GLY
127
A
TYR
128
n
39
TYR
128
A
MET
129
n
40
MET
129
A
LEU
130
n
41
LEU
130
A
GLY
131
n
42
GLY
131
A
SER
132
n
43
SER
132
A
ALA
133
n
44
ALA
133
A
MET
134
n
45
MET
134
A
SER
135
n
46
SER
135
A
ARG
136
n
47
ARG
136
A
PRO
137
n
48
PRO
137
A
ILE
138
n
49
ILE
138
A
ILE
139
n
50
ILE
139
A
HIS
140
n
51
HIS
140
A
PHE
141
n
52
PHE
141
A
GLY
142
n
53
GLY
142
A
SER
143
n
54
SER
143
A
ASP
144
n
55
ASP
144
A
TYR
145
n
56
TYR
145
A
GLU
146
n
57
GLU
146
A
ASP
147
n
58
ASP
147
A
ARG
148
n
59
ARG
148
A
TYR
149
n
60
TYR
149
A
TYR
150
n
61
TYR
150
A
ARG
151
n
62
ARG
151
A
GLU
152
n
63
GLU
152
A
ASN
153
n
64
ASN
153
A
MET
154
n
65
MET
154
A
HIS
155
n
66
HIS
155
A
ARG
156
n
67
ARG
156
A
TYR
157
n
68
TYR
157
A
PRO
158
n
69
PRO
158
A
ASN
159
n
70
ASN
159
A
GLN
160
n
71
GLN
160
A
VAL
161
n
72
VAL
161
A
TYR
162
n
73
TYR
162
A
TYR
163
n
74
TYR
163
A
ARG
164
n
75
ARG
164
A
PRO
165
n
76
PRO
165
A
MET
166
n
77
MET
166
A
ASP
167
n
78
ASP
167
A
GLU
168
n
79
GLU
168
A
TYR
169
n
80
TYR
169
A
SER
170
n
81
SER
170
A
ASN
171
n
82
ASN
171
A
GLN
172
n
83
GLN
172
A
ASN
173
n
84
ASN
173
A
ASN
174
n
85
ASN
174
A
PHE
175
n
86
PHE
175
A
VAL
176
n
87
VAL
176
A
HIS
177
n
88
HIS
177
A
ASP
178
n
89
ASP
178
A
CYS
179
n
90
CYS
179
A
VAL
180
n
91
VAL
180
A
ASN
181
n
92
ASN
181
A
ILE
182
n
93
ILE
182
A
THR
183
n
94
THR
183
A
ILE
184
n
95
ILE
184
A
LYS
185
n
96
LYS
185
A
GLN
186
n
97
GLN
186
A
HIS
187
n
98
HIS
187
A
THR
188
n
99
THR
188
A
VAL
189
n
100
VAL
189
A
THR
190
n
101
THR
190
A
THR
191
n
102
THR
191
A
THR
192
n
103
THR
192
A
THR
193
n
104
THR
193
A
LYS
194
n
105
LYS
194
A
GLY
195
n
106
GLY
195
A
GLU
196
n
107
GLU
196
A
ASN
197
n
108
ASN
197
A
PHE
198
n
109
PHE
198
A
THR
199
n
110
THR
199
A
GLU
200
n
111
GLU
200
A
THR
201
n
112
THR
201
A
ASP
202
n
113
ASP
202
A
VAL
203
n
114
VAL
203
A
LYS
204
n
115
LYS
204
A
MET
205
n
116
MET
205
A
MET
206
n
117
MET
206
A
GLU
207
n
118
GLU
207
A
ARG
208
n
119
ARG
208
A
VAL
209
n
120
VAL
209
A
VAL
210
n
121
VAL
210
A
GLU
211
n
122
GLU
211
A
GLN
212
n
123
GLN
212
A
MET
213
n
124
MET
213
A
CYS
214
n
125
CYS
214
A
ILE
215
n
126
ILE
215
A
THR
216
n
127
THR
216
A
GLN
217
n
128
GLN
217
A
TYR
218
n
129
TYR
218
A
GLU
219
n
130
GLU
219
A
ARG
220
n
131
ARG
220
A
GLU
221
n
132
GLU
221
A
SER
222
n
133
SER
222
A
GLN
223
n
134
GLN
223
A
ALA
224
n
135
ALA
224
A
n
136
225
A
n
137
226
A
n
138
227
A
n
139
228
A
n
140
229
A
n
141
230
A
n
142
231
A
ALA
1
n
1
ALA
1
B
ALA
2
n
2
ALA
2
B
GLN
3
n
3
GLN
3
B
LEU
4
n
4
LEU
4
B
GLN
5
n
5
GLN
5
B
GLU
6
n
6
GLU
6
B
SER
7
n
7
SER
7
B
GLY
8
n
8
GLY
8
B
GLY
9
n
9
GLY
9
B
GLY
10
n
10
GLY
10
B
LEU
11
n
11
LEU
11
B
VAL
12
n
12
VAL
12
B
GLN
13
n
13
GLN
13
B
PRO
14
n
14
PRO
14
B
GLY
15
n
15
GLY
15
B
GLY
16
n
16
GLY
16
B
SER
17
n
17
SER
17
B
LEU
18
n
18
LEU
18
B
ARG
19
n
19
ARG
19
B
LEU
20
n
20
LEU
20
B
SER
21
n
21
SER
21
B
CYS
22
n
22
CYS
22
B
ALA
23
n
23
ALA
23
B
ALA
24
n
24
ALA
24
B
SER
25
n
25
SER
25
B
GLY
26
n
26
GLY
26
B
ARG
27
n
27
ARG
27
B
THR
28
n
28
THR
28
B
PHE
29
n
29
PHE
29
B
SER
30
n
30
SER
30
B
SER
31
n
31
SER
31
B
TYR
32
n
32
TYR
32
B
ASN
33
n
33
ASN
33
B
MET
34
n
34
MET
34
B
GLY
35
n
35
GLY
35
B
TRP
36
n
36
TRP
36
B
PHE
37
n
37
PHE
37
B
ARG
38
n
38
ARG
38
B
GLN
39
n
39
GLN
39
B
ALA
40
n
40
ALA
40
B
PRO
41
n
41
PRO
41
B
GLY
42
n
42
GLY
42
B
LYS
43
n
43
LYS
43
B
GLY
44
n
44
GLY
44
B
ARG
45
n
45
ARG
45
B
GLU
46
n
46
GLU
46
B
PHE
47
n
47
PHE
47
B
VAL
48
n
48
VAL
48
B
ALA
49
n
49
ALA
49
B
SER
50
n
50
SER
50
B
ILE
51
n
51
ILE
51
B
THR
52
n
52
THR
52
B
SER
53
n
53
SER
53
B
SER
54
n
54
SER
54
B
GLY
55
n
55
GLY
55
B
ASP
56
n
56
ASP
56
B
LYS
57
n
57
LYS
57
B
SER
58
n
58
SER
58
B
ASP
59
n
59
ASP
59
B
TYR
60
n
60
TYR
60
B
THR
61
n
61
THR
61
B
ASP
62
n
62
ASP
62
B
SER
63
n
63
SER
63
B
VAL
64
n
64
VAL
64
B
LYS
65
n
65
LYS
65
B
GLY
66
n
66
GLY
66
B
ARG
67
n
67
ARG
67
B
PHE
68
n
68
PHE
68
B
THR
69
n
69
THR
69
B
ILE
70
n
70
ILE
70
B
SER
71
n
71
SER
71
B
ARG
72
n
72
ARG
72
B
ASP
73
n
73
ASP
73
B
ASN
74
n
74
ASN
74
B
ALA
75
n
75
ALA
75
B
LYS
76
n
76
LYS
76
B
ASN
77
n
77
ASN
77
B
THR
78
n
78
THR
78
B
MET
79
n
79
MET
79
B
TYR
80
n
80
TYR
80
B
LEU
81
n
81
LEU
81
B
GLN
82
n
82
GLN
82
B
MET
83
n
83
MET
83
B
ASN
84
n
84
ASN
84
B
ASN
85
n
85
ASN
85
B
LEU
86
n
86
LEU
86
B
LYS
87
n
87
LYS
87
B
PRO
88
n
88
PRO
88
B
GLU
89
n
89
GLU
89
B
ASP
90
n
90
ASP
90
B
THR
91
n
91
THR
91
B
ALA
92
n
92
ALA
92
B
THR
93
n
93
THR
93
B
TYR
94
n
94
TYR
94
B
TYR
95
n
95
TYR
95
B
CYS
96
n
96
CYS
96
B
ALA
97
n
97
ALA
97
B
ARG
98
n
98
ARG
98
B
GLY
99
n
99
GLY
99
B
LEU
100
n
100
LEU
100
B
GLY
101
n
101
GLY
101
B
ILE
102
n
102
ILE
102
B
TYR
103
n
103
TYR
103
B
ILE
104
n
104
ILE
104
B
ILE
105
n
105
ILE
105
B
ARG
106
n
106
ARG
106
B
ALA
107
n
107
ALA
107
B
ARG
108
n
108
ARG
108
B
GLY
109
n
109
GLY
109
B
GLY
110
n
110
GLY
110
B
TYR
111
n
111
TYR
111
B
ASP
112
n
112
ASP
112
B
HIS
113
n
113
HIS
113
B
TRP
114
n
114
TRP
114
B
GLY
115
n
115
GLY
115
B
GLN
116
n
116
GLN
116
B
GLY
117
n
117
GLY
117
B
THR
118
n
118
THR
118
B
GLN
119
n
119
GLN
119
B
VAL
120
n
120
VAL
120
B
THR
121
n
121
THR
121
B
VAL
122
n
122
VAL
122
B
SER
123
n
123
SER
123
B
SER
124
n
124
SER
124
B
n
125
125
B
n
126
126
B
n
127
127
B
n
128
128
B
n
129
129
B
n
130
130
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
122
A
N
VAL
33
A
O
LEU
125
A
O
LEU
36
A
N
MET
129
A
N
MET
40
A
O
TYR
163
A
O
TYR
74
B
N
GLN
5
B
N
GLN
5
B
O
ALA
23
B
O
ALA
23
B
N
LEU
18
B
N
LEU
18
B
O
MET
83
B
O
MET
83
B
O
THR
78
B
O
THR
78
B
N
ASP
73
B
N
ASP
73
B
N
VAL
12
B
N
VAL
12
B
O
THR
121
B
O
THR
121
B
O
THR
118
B
O
THR
118
B
N
TYR
94
B
N
TYR
94
B
O
THR
93
B
O
THR
93
B
N
GLN
39
B
N
GLN
39
B
N
TRP
36
B
N
TRP
36
B
O
ALA
49
B
O
ALA
49
B
N
SER
50
B
N
SER
50
B
O
ASP
59
B
O
ASP
59
B
N
VAL
12
B
N
VAL
12
B
O
THR
121
B
O
THR
121
B
O
THR
118
B
O
THR
118
B
N
TYR
94
B
N
TYR
94
B
N
ARG
98
B
N
ARG
98
B
O
ASP
112
B
O
ASP
112
1
A
GLY
90
A
GLY
1
1
Y
1
A
GLN
91
A
GLN
2
1
Y
1
A
GLY
92
A
GLY
3
1
Y
1
A
GLY
93
A
GLY
4
1
Y
1
A
GLY
94
A
GLY
5
1
Y
1
A
THR
95
A
THR
6
1
Y
1
A
HIS
96
A
HIS
7
1
Y
1
A
SER
97
A
SER
8
1
Y
1
A
GLN
98
A
GLN
9
1
Y
1
A
TRP
99
A
TRP
10
1
Y
1
A
ASN
100
A
ASN
11
1
Y
1
A
LYS
101
A
LYS
12
1
Y
1
A
PRO
102
A
PRO
13
1
Y
1
A
SER
103
A
SER
14
1
Y
1
A
LYS
104
A
LYS
15
1
Y
1
A
PRO
105
A
PRO
16
1
Y
1
A
LYS
106
A
LYS
17
1
Y
1
A
THR
107
A
THR
18
1
Y
1
A
ASN
108
A
ASN
19
1
Y
1
A
MET
109
A
MET
20
1
Y
1
A
LYS
110
A
LYS
21
1
Y
1
A
HIS
111
A
HIS
22
1
Y
1
A
MET
112
A
MET
23
1
Y
1
A
ALA
113
A
ALA
24
1
Y
1
A
GLY
114
A
GLY
25
1
Y
1
A
ALA
115
A
ALA
26
1
Y
1
A
ALA
116
A
ALA
27
1
Y
1
A
ALA
117
A
ALA
28
1
Y
1
A
TYR
225
A
TYR
136
1
Y
1
A
TYR
226
A
TYR
137
1
Y
1
A
GLN
227
A
GLN
138
1
Y
1
A
ARG
228
A
ARG
139
1
Y
1
A
GLY
229
A
GLY
140
1
Y
1
A
SER
230
A
SER
141
1
Y
1
A
SER
231
A
SER
142
1
Y
1
B
HIS
125
B
HIS
125
1
Y
1
B
HIS
126
B
HIS
126
1
Y
1
B
HIS
127
B
HIS
127
1
Y
1
B
HIS
128
B
HIS
128
1
Y
1
B
HIS
129
B
HIS
129
1
Y
1
B
HIS
130
B
HIS
130
1
Y
1
-3.15
0.50
120.30
117.15
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
151
151
151
N
1
-3.29
0.50
120.30
117.01
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
164
164
164
N
1
6.27
0.90
118.30
124.57
B
B
B
CB
CG
OD1
ASP
ASP
ASP
56
56
56
N
1
-14.57
1.60
100.20
85.63
B
B
B
CG
SD
CE
MET
MET
MET
83
83
83
N
1
A
A
CD
OE2
GLU
GLU
196
196
-0.069
0.011
1.252
1.183
N
1
A
A
CZ
NH2
ARG
ARG
220
220
0.085
0.013
1.326
1.411
N
1
A
A
C
O
ALA
ALA
224
224
-0.154
0.019
1.229
1.075
N
1
B
B
CD
OE1
GLU
GLU
89
89
0.122
0.011
1.252
1.374
N
1
B
B
CD
OE2
GLU
GLU
89
89
0.102
0.011
1.252
1.354
N
1
B
ALA
92
178.26
167.20
69.170
16.7219
6.440
0.0300
0.0000
0.0100
-0.0200
0.0000
-0.0100
0.9650
0.9550
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY
0.1843
0.1497
0.1514
1.5000
24.9300
2137
42305
5.1000
98.3400
0.1913
0.1534
1.000
0.500
0.8918
2.1260
0.0370
0.0688
0.0630
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.0690
0.0630
0.8000
0.8000
1.2000
2W9E
MAXIMUM LIKELIHOOD
MASK
1.5000
24.9300
171
1981
0
0
1810
0.023
0.019
1861
0.001
0.020
1686
1.939
1.930
2512
0.892
3.000
3866
6.228
5.000
233
30.402
23.263
95
11.780
15.000
310
17.118
15.000
17
0.123
0.200
259
0.011
0.020
2177
0.001
0.020
474
2.578
1.395
926
2.573
1.392
925
2.972
2.094
1155
5.529
3.000
3547
19.241
5.000
62
9.220
5.000
3616
0.2360
0.1660
1.5390
166
2857
3023
20
97.1700
1.500
65.540
4N9O
42399
42399
2.0
2.0
0.058
1
13.800
4.000
98.800
0.240
1.500
1.580
2.800
24907
6092
0.240
1
4.100
97.800
0.168
1.580
1.680
4.000
23853
5779
0.168
1
4.100
98.200
0.123
1.680
1.790
5.400
22456
5455
0.123
1
4.100
98.500
0.090
1.790
1.940
6.500
20942
5111
0.090
1
4.100
98.800
0.064
1.940
2.120
8.800
19258
4727
0.064
1
4.100
99.300
0.056
2.120
2.370
9.700
17313
4289
0.056
1
4.000
99.500
0.055
2.370
2.740
9.700
15153
3794
0.055
1
4.000
99.700
0.045
2.740
3.350
10.700
12582
3225
0.045
1
3.900
99.700
0.043
3.350
4.740
10.900
9589
2516
0.043
1
3.800
99.400
0.047
4.740
25.185
9.500
5636
1411
0.047
1
4.000
98.100
data reduction
Andrew G.W. Leslie
andrew@mrc-lmb.cam.ac.uk
http://www.mrc-lmb.cam.ac.uk/harry/mosflm/
MOSFLM
package
data scaling
Phil R. Evans
pre@mrc-lmb.cam.ac.uk
2010/01/06
Fortran_77
http://www.ccp4.ac.uk/dist/html/scala.html
SCALA
other
3.3.16
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
Wed Jun 24 14:00:05 2009
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
2.1.4
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
Probing the N-terminal beta-sheet conversion in the crystal structure of the human prion protein bound to a Nanobody
1
N
N
2
N
N
3
N
N
3
N
N
A
SER
143
A
SER
54
HELX_P
A
MET
154
A
MET
65
1
1
12
A
HIS
155
A
HIS
66
HELX_P
A
TYR
157
A
TYR
68
5
2
3
A
PRO
165
A
PRO
76
HELX_P
A
TYR
169
A
TYR
80
5
3
5
A
ASN
171
A
ASN
82
HELX_P
A
LYS
194
A
LYS
105
1
4
24
A
THR
199
A
THR
110
HELX_P
A
ALA
224
A
ALA
135
1
5
26
B
THR
28
B
THR
28
HELX_P
B
TYR
32
B
TYR
32
5
6
5
B
LYS
87
B
LYS
87
HELX_P
B
THR
91
B
THR
91
5
7
5
B
ALA
107
B
ALA
107
HELX_P
B
GLY
109
B
GLY
109
5
8
3
disulf
2.041
A
CYS
179
A
SG
CYS
90
1_555
A
CYS
214
A
SG
CYS
125
1_555
disulf
2.164
B
CYS
22
B
SG
CYS
22
1_555
B
CYS
96
B
SG
CYS
96
1_555
MEMBRANE PROTEIN/PROTEIN BINDING
Prion-like fold, antibody, nanobody, MEMBRANE PROTEIN-PROTEIN BINDING complex
PRIO_HUMAN
UNP
1
90
P04156
GQGGGTHSQWNKPSKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEY
SNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQRGSS
4N9O
PDB
2
4N9O
90
231
4N9O
90
231
P04156
A
1
1
142
1
130
4N9O
1
130
4N9O
B
2
1
130
3
4
6
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
GLY
119
A
GLY
30
A
VAL
122
A
VAL
33
A
LEU
125
A
LEU
36
A
LEU
130
A
LEU
41
A
TYR
162
A
TYR
73
A
TYR
163
A
TYR
74
B
LEU
4
B
LEU
4
B
SER
7
B
SER
7
B
LEU
18
B
LEU
18
B
ALA
24
B
ALA
24
B
THR
78
B
THR
78
B
MET
83
B
MET
83
B
PHE
68
B
PHE
68
B
ASP
73
B
ASP
73
B
GLY
10
B
GLY
10
B
VAL
12
B
VAL
12
B
THR
118
B
THR
118
B
VAL
122
B
VAL
122
B
ALA
92
B
ALA
92
B
GLY
99
B
GLY
99
B
MET
34
B
MET
34
B
GLN
39
B
GLN
39
B
GLU
46
B
GLU
46
B
ILE
51
B
ILE
51
B
SER
58
B
SER
58
B
TYR
60
B
TYR
60
B
GLY
10
B
GLY
10
B
VAL
12
B
VAL
12
B
THR
118
B
THR
118
B
VAL
122
B
VAL
122
B
ALA
92
B
ALA
92
B
GLY
99
B
GLY
99
B
TYR
111
B
TYR
111
B
ASP
112
B
ASP
112
5
C 1 2 1