0.010898 -0.000000 -0.000000 0.000000 0.010898 -0.000000 0.000000 0.000000 0.011675 0.000000 0.000000 0.000000 Khan, J.A. Camac, D.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 91.760 91.760 85.651 C23 H35 Cl N2 O4 438.988 N-{(2R)-1-[(4S)-4-(4-chlorophenyl)-4-hydroxy-3,3-dimethylpiperidin-1-yl]-3-methyl-1-oxobutan-2-yl}-3-hydroxy-3-methylbutanamide non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N CL Y 2 N C Y 3 N C Y 4 N C Y 5 N C Y 6 N C Y 7 N C N 8 S C N 9 N C N 10 N O N 11 N C N 12 N C N 13 N C N 14 N C N 15 N N N 16 N C N 17 N C N 18 N O N 19 R C N 20 N C N 21 N C N 22 N C N 23 N N N 24 N C N 25 N O N 26 N C N 27 N C N 28 N O N 29 N C N 30 N C N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N N N 67 S C N 68 N C N 69 N O N 70 N C N 71 N O N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N N N 80 S C N 81 N C N 82 N O N 83 N C N 84 N C N 85 N C N 86 N N N 87 N C N 88 N N N 89 N N N 90 N O N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N N N 107 S C N 108 N C N 109 N O N 110 N C N 111 N C N 112 N O N 113 N N N 114 N O N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C N 128 N C N 129 N O N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N N N 140 R C N 141 N C N 142 N O N 143 N C N 144 N S N 145 N O N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N N N 154 S C N 155 N C N 156 N O N 157 N C N 158 N C N 159 N C N 160 N O N 161 N N N 162 N O N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N N N 174 S C N 175 N C N 176 N O N 177 N C N 178 N C N 179 N C N 180 N O N 181 N O N 182 N O N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N N N 193 N C N 194 N C N 195 N O N 196 N O N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N C N 203 N O N 204 N C N 205 N O N 206 N C N 207 N O N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C Y 221 N C Y 222 N N Y 223 N C Y 224 N C Y 225 N N N 226 N O N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N O N 238 N H N 239 N H N 240 N N N 241 S C N 242 N C N 243 N O N 244 S C N 245 N C N 246 N C N 247 N C N 248 N O N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N N N 263 S C N 264 N C N 265 N O N 266 N C N 267 N C N 268 N C N 269 N C N 270 N O N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N N N 285 S C N 286 N C N 287 N O N 288 N C N 289 N C N 290 N C N 291 N C N 292 N N N 293 N O N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N N N 310 S C N 311 N C N 312 N O N 313 N C N 314 N C N 315 N S N 316 N C N 317 N O N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N N N 330 S C N 331 N C N 332 N O N 333 N C Y 334 N C Y 335 N C Y 336 N C Y 337 N C Y 338 N C Y 339 N C N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N N N 353 S C N 354 N C N 355 N O N 356 N C N 357 N C N 358 N C N 359 N O N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C N 374 N O N 375 N O N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N N N 384 S C N 385 N C N 386 N O N 387 R C N 388 N O N 389 N C N 390 N O N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N N N 401 S C N 402 N C N 403 N O N 404 N C Y 405 N C Y 406 N C Y 407 N C Y 408 N N Y 409 N C Y 410 N C Y 411 N C Y 412 N C Y 413 N C N 414 N O N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N N N 428 S C N 429 N C N 430 N O N 431 N C Y 432 N C Y 433 N C Y 434 N C Y 435 N C Y 436 N C Y 437 N C N 438 N O N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N N N 452 S C N 453 N C N 454 N O N 455 N C N 456 N C N 457 N C N 458 N O N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing Y 9 N doub Y 10 N sing N 11 N sing Y 12 N sing N 13 N sing Y 14 N doub N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing Y 21 N doub Y 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N doub N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N doub N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N doub N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N doub N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N doub N 215 N sing N 216 N sing N 217 N sing N 218 N sing Y 219 N sing Y 220 N doub Y 221 N doub N 222 N sing Y 223 N sing N 224 N sing Y 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N doub N 323 N sing N 324 N sing N 325 N sing N 326 N sing Y 327 N doub Y 328 N sing Y 329 N sing N 330 N sing Y 331 N doub N 332 N sing Y 333 N doub N 334 N sing Y 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N doub N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N doub N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N doub N 392 N sing N 393 N sing N 394 N sing N 395 N sing Y 396 N doub Y 397 N sing Y 398 N sing N 399 N sing Y 400 N doub Y 401 N sing Y 402 N sing N 403 N sing Y 404 N sing Y 405 N doub N 406 N sing Y 407 N doub N 408 N sing Y 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N doub N 420 N sing N 421 N sing N 422 N sing N 423 N sing Y 424 N doub Y 425 N sing Y 426 N sing N 427 N sing Y 428 N doub N 429 N sing Y 430 N doub N 431 N sing Y 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N doub N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing US J.Med.Chem. JMCMAR 0151 0022-2623 57 7550 7564 10.1021/jm5003167 25101488 Discovery of the CCR1 antagonist, BMS-817399, for the treatment of rheumatoid arthritis. 2014 10.2210/pdb4ny9/pdb pdb_00004ny9 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 100.0 1 CCD 2008-03-21 RAYONIX MX-300 SINGLE WAVELENGTH M x-ray 1 1 1.0 1.0 1.0 22-ID APS 1 1.0 SYNCHROTRON APS BEAMLINE 22-ID 33447.750 Nuclear receptor subfamily 1 group I member 2 unp residues 142-431 1 man polymer 438.988 N-{(2R)-1-[(4S)-4-(4-chlorophenyl)-4-hydroxy-3,3-dimethylpiperidin-1-yl]-3-methyl-1-oxobutan-2-yl}-3-hydroxy-3-methylbutanamide 1 syn non-polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 15 nat water Orphan nuclear receptor PAR1, Orphan nuclear receptor PXR, Pregnane X receptor, Steroid and xenobiotic receptor, SXR no no GLTEEQRMMIRELMDAQMKTFDTTFSHFKNFRLPGVLSSGCELPESLQAPSREEAAKWSQVRKDLCSLKVSLQLRGEDGS VWNYKPPADSGGKEIFSLLPHMADMSTYMFKGIISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAETGTWEC GRLSYCLEDTAGGFQQLLLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNR PQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELFGI GLTEEQRMMIRELMDAQMKTFDTTFSHFKNFRLPGVLSSGCELPESLQAPSREEAAKWSQVRKDLCSLKVSLQLRGEDGS VWNYKPPADSGGKEIFSLLPHMADMSTYMFKGIISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAETGTWEC GRLSYCLEDTAGGFQQLLLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNR PQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELFGI A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample NR1I2, PXR 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) PLASMID pCO7 1 2.69 58.60 VAPOR DIFFUSION, HANGING DROP 7.8 0.1M imidazole, 8-10%(V/V)isopropanol. Apo crystal was soaked with 5 mM compound and Crystals harvested next day using 32% ethylene glycol as cryoprotectant, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 296K 296 software chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Database references Refinement description Data collection Database references Derived calculations 1 0 2014-08-27 1 1 2014-12-10 1 2 2017-11-22 1 3 2024-02-28 _software.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2013-12-10 REL REL 2Q4 N-{(2R)-1-[(4S)-4-(4-chlorophenyl)-4-hydroxy-3,3-dimethylpiperidin-1-yl]-3-methyl-1-oxobutan-2-yl}-3-hydroxy-3-methylbutanamide GOL GLYCEROL HOH water LG1 1 2 2Q4 2Q4 501 A GOL 1 3 GOL GOL 502 A HOH 1 4 HOH HOH 601 A HOH 2 4 HOH HOH 602 A HOH 3 4 HOH HOH 603 A HOH 4 4 HOH HOH 604 A HOH 5 4 HOH HOH 605 A HOH 6 4 HOH HOH 606 A HOH 7 4 HOH HOH 607 A HOH 9 4 HOH HOH 608 A HOH 10 4 HOH HOH 609 A HOH 11 4 HOH HOH 610 A HOH 13 4 HOH HOH 611 A HOH 16 4 HOH HOH 612 A HOH 18 4 HOH HOH 613 A HOH 19 4 HOH HOH 614 A HOH 20 4 HOH HOH 615 A GLY 142 n 1 GLY 142 A LEU 143 n 2 LEU 143 A THR 144 n 3 THR 144 A GLU 145 n 4 GLU 145 A GLU 146 n 5 GLU 146 A GLN 147 n 6 GLN 147 A ARG 148 n 7 ARG 148 A MET 149 n 8 MET 149 A MET 150 n 9 MET 150 A ILE 151 n 10 ILE 151 A ARG 152 n 11 ARG 152 A GLU 153 n 12 GLU 153 A LEU 154 n 13 LEU 154 A MET 155 n 14 MET 155 A ASP 156 n 15 ASP 156 A ALA 157 n 16 ALA 157 A GLN 158 n 17 GLN 158 A MET 159 n 18 MET 159 A LYS 160 n 19 LYS 160 A THR 161 n 20 THR 161 A PHE 162 n 21 PHE 162 A ASP 163 n 22 ASP 163 A THR 164 n 23 THR 164 A THR 165 n 24 THR 165 A PHE 166 n 25 PHE 166 A SER 167 n 26 SER 167 A HIS 168 n 27 HIS 168 A PHE 169 n 28 PHE 169 A LYS 170 n 29 LYS 170 A ASN 171 n 30 ASN 171 A PHE 172 n 31 PHE 172 A ARG 173 n 32 ARG 173 A LEU 174 n 33 LEU 174 A PRO 175 n 34 PRO 175 A GLY 176 n 35 GLY 176 A n 36 177 A n 37 178 A n 38 179 A n 39 180 A n 40 181 A n 41 182 A n 42 183 A n 43 184 A n 44 185 A n 45 186 A n 46 187 A n 47 188 A n 48 189 A n 49 190 A n 50 191 A n 51 192 A n 52 193 A n 53 194 A n 54 195 A n 55 196 A n 56 197 A n 57 198 A n 58 199 A n 59 200 A GLN 201 n 60 GLN 201 A VAL 202 n 61 VAL 202 A ARG 203 n 62 ARG 203 A LYS 204 n 63 LYS 204 A ASP 205 n 64 ASP 205 A LEU 206 n 65 LEU 206 A CYS 207 n 66 CYS 207 A SER 208 n 67 SER 208 A LEU 209 n 68 LEU 209 A LYS 210 n 69 LYS 210 A VAL 211 n 70 VAL 211 A SER 212 n 71 SER 212 A LEU 213 n 72 LEU 213 A GLN 214 n 73 GLN 214 A LEU 215 n 74 LEU 215 A ARG 216 n 75 ARG 216 A GLY 217 n 76 GLY 217 A GLU 218 n 77 GLU 218 A ASP 219 n 78 ASP 219 A GLY 220 n 79 GLY 220 A SER 221 n 80 SER 221 A VAL 222 n 81 VAL 222 A TRP 223 n 82 TRP 223 A ASN 224 n 83 ASN 224 A TYR 225 n 84 TYR 225 A LYS 226 n 85 LYS 226 A PRO 227 n 86 PRO 227 A PRO 228 n 87 PRO 228 A ALA 229 n 88 ALA 229 A ASP 230 n 89 ASP 230 A SER 231 n 90 SER 231 A GLY 232 n 91 GLY 232 A GLY 233 n 92 GLY 233 A LYS 234 n 93 LYS 234 A GLU 235 n 94 GLU 235 A ILE 236 n 95 ILE 236 A PHE 237 n 96 PHE 237 A SER 238 n 97 SER 238 A LEU 239 n 98 LEU 239 A LEU 240 n 99 LEU 240 A PRO 241 n 100 PRO 241 A HIS 242 n 101 HIS 242 A MET 243 n 102 MET 243 A ALA 244 n 103 ALA 244 A ASP 245 n 104 ASP 245 A MET 246 n 105 MET 246 A SER 247 n 106 SER 247 A THR 248 n 107 THR 248 A TYR 249 n 108 TYR 249 A MET 250 n 109 MET 250 A PHE 251 n 110 PHE 251 A LYS 252 n 111 LYS 252 A GLY 253 n 112 GLY 253 A ILE 254 n 113 ILE 254 A ILE 255 n 114 ILE 255 A SER 256 n 115 SER 256 A PHE 257 n 116 PHE 257 A ALA 258 n 117 ALA 258 A LYS 259 n 118 LYS 259 A VAL 260 n 119 VAL 260 A ILE 261 n 120 ILE 261 A SER 262 n 121 SER 262 A TYR 263 n 122 TYR 263 A PHE 264 n 123 PHE 264 A ARG 265 n 124 ARG 265 A ASP 266 n 125 ASP 266 A LEU 267 n 126 LEU 267 A PRO 268 n 127 PRO 268 A ILE 269 n 128 ILE 269 A GLU 270 n 129 GLU 270 A ASP 271 n 130 ASP 271 A GLN 272 n 131 GLN 272 A ILE 273 n 132 ILE 273 A SER 274 n 133 SER 274 A LEU 275 n 134 LEU 275 A LEU 276 n 135 LEU 276 A LYS 277 n 136 LYS 277 A GLY 278 n 137 GLY 278 A ALA 279 n 138 ALA 279 A ALA 280 n 139 ALA 280 A PHE 281 n 140 PHE 281 A GLU 282 n 141 GLU 282 A LEU 283 n 142 LEU 283 A CYS 284 n 143 CYS 284 A GLN 285 n 144 GLN 285 A LEU 286 n 145 LEU 286 A ARG 287 n 146 ARG 287 A PHE 288 n 147 PHE 288 A ASN 289 n 148 ASN 289 A THR 290 n 149 THR 290 A VAL 291 n 150 VAL 291 A PHE 292 n 151 PHE 292 A ASN 293 n 152 ASN 293 A ALA 294 n 153 ALA 294 A GLU 295 n 154 GLU 295 A THR 296 n 155 THR 296 A GLY 297 n 156 GLY 297 A THR 298 n 157 THR 298 A TRP 299 n 158 TRP 299 A GLU 300 n 159 GLU 300 A CYS 301 n 160 CYS 301 A GLY 302 n 161 GLY 302 A ARG 303 n 162 ARG 303 A LEU 304 n 163 LEU 304 A SER 305 n 164 SER 305 A TYR 306 n 165 TYR 306 A CYS 307 n 166 CYS 307 A LEU 308 n 167 LEU 308 A GLU 309 n 168 GLU 309 A n 169 310 A n 170 311 A n 171 312 A n 172 313 A n 173 314 A n 174 315 A GLN 316 n 175 GLN 316 A GLN 317 n 176 GLN 317 A LEU 318 n 177 LEU 318 A LEU 319 n 178 LEU 319 A LEU 320 n 179 LEU 320 A GLU 321 n 180 GLU 321 A PRO 322 n 181 PRO 322 A MET 323 n 182 MET 323 A LEU 324 n 183 LEU 324 A LYS 325 n 184 LYS 325 A PHE 326 n 185 PHE 326 A HIS 327 n 186 HIS 327 A TYR 328 n 187 TYR 328 A MET 329 n 188 MET 329 A LEU 330 n 189 LEU 330 A LYS 331 n 190 LYS 331 A LYS 332 n 191 LYS 332 A LEU 333 n 192 LEU 333 A GLN 334 n 193 GLN 334 A LEU 335 n 194 LEU 335 A HIS 336 n 195 HIS 336 A GLU 337 n 196 GLU 337 A GLU 338 n 197 GLU 338 A GLU 339 n 198 GLU 339 A TYR 340 n 199 TYR 340 A VAL 341 n 200 VAL 341 A LEU 342 n 201 LEU 342 A MET 343 n 202 MET 343 A GLN 344 n 203 GLN 344 A ALA 345 n 204 ALA 345 A ILE 346 n 205 ILE 346 A SER 347 n 206 SER 347 A LEU 348 n 207 LEU 348 A PHE 349 n 208 PHE 349 A SER 350 n 209 SER 350 A PRO 351 n 210 PRO 351 A ASP 352 n 211 ASP 352 A ARG 353 n 212 ARG 353 A PRO 354 n 213 PRO 354 A GLY 355 n 214 GLY 355 A VAL 356 n 215 VAL 356 A LEU 357 n 216 LEU 357 A GLN 358 n 217 GLN 358 A HIS 359 n 218 HIS 359 A ARG 360 n 219 ARG 360 A VAL 361 n 220 VAL 361 A VAL 362 n 221 VAL 362 A ASP 363 n 222 ASP 363 A GLN 364 n 223 GLN 364 A LEU 365 n 224 LEU 365 A GLN 366 n 225 GLN 366 A GLU 367 n 226 GLU 367 A GLN 368 n 227 GLN 368 A PHE 369 n 228 PHE 369 A ALA 370 n 229 ALA 370 A ILE 371 n 230 ILE 371 A THR 372 n 231 THR 372 A LEU 373 n 232 LEU 373 A LYS 374 n 233 LYS 374 A SER 375 n 234 SER 375 A TYR 376 n 235 TYR 376 A ILE 377 n 236 ILE 377 A GLU 378 n 237 GLU 378 A CYS 379 n 238 CYS 379 A ASN 380 n 239 ASN 380 A ARG 381 n 240 ARG 381 A PRO 382 n 241 PRO 382 A GLN 383 n 242 GLN 383 A PRO 384 n 243 PRO 384 A ALA 385 n 244 ALA 385 A HIS 386 n 245 HIS 386 A ARG 387 n 246 ARG 387 A PHE 388 n 247 PHE 388 A LEU 389 n 248 LEU 389 A PHE 390 n 249 PHE 390 A LEU 391 n 250 LEU 391 A LYS 392 n 251 LYS 392 A ILE 393 n 252 ILE 393 A MET 394 n 253 MET 394 A ALA 395 n 254 ALA 395 A MET 396 n 255 MET 396 A LEU 397 n 256 LEU 397 A THR 398 n 257 THR 398 A GLU 399 n 258 GLU 399 A LEU 400 n 259 LEU 400 A ARG 401 n 260 ARG 401 A SER 402 n 261 SER 402 A ILE 403 n 262 ILE 403 A ASN 404 n 263 ASN 404 A ALA 405 n 264 ALA 405 A GLN 406 n 265 GLN 406 A HIS 407 n 266 HIS 407 A THR 408 n 267 THR 408 A GLN 409 n 268 GLN 409 A ARG 410 n 269 ARG 410 A LEU 411 n 270 LEU 411 A LEU 412 n 271 LEU 412 A ARG 413 n 272 ARG 413 A ILE 414 n 273 ILE 414 A GLN 415 n 274 GLN 415 A ASP 416 n 275 ASP 416 A ILE 417 n 276 ILE 417 A HIS 418 n 277 HIS 418 A PRO 419 n 278 PRO 419 A PHE 420 n 279 PHE 420 A ALA 421 n 280 ALA 421 A THR 422 n 281 THR 422 A PRO 423 n 282 PRO 423 A LEU 424 n 283 LEU 424 A MET 425 n 284 MET 425 A GLN 426 n 285 GLN 426 A GLU 427 n 286 GLU 427 A LEU 428 n 287 LEU 428 A PHE 429 n 288 PHE 429 A GLY 430 n 289 GLY 430 A ILE 431 n 290 ILE 431 A author_defined_assembly 1 monomeric software_defined_assembly PISA 2 dimeric 1810 -8 26290 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 8_555 -y,-x,-z+1/2 crystal symmetry operation 0.0000000000 0.0000000000 42.8255000000 A O TYR 225 A O TYR 84 A N LEU 213 A N LEU 72 A N SER 212 A N SER 71 A O CYS 307 A O CYS 166 A O TYR 306 A O TYR 165 A N TRP 299 A N TRP 158 A O THR 298 A O THR 157 A N ASN 293 A N ASN 152 1 A VAL 177 A VAL 36 1 Y 1 A LEU 178 A LEU 37 1 Y 1 A SER 179 A SER 38 1 Y 1 A SER 180 A SER 39 1 Y 1 A GLY 181 A GLY 40 1 Y 1 A CYS 182 A CYS 41 1 Y 1 A GLU 183 A GLU 42 1 Y 1 A LEU 184 A LEU 43 1 Y 1 A PRO 185 A PRO 44 1 Y 1 A GLU 186 A GLU 45 1 Y 1 A SER 187 A SER 46 1 Y 1 A LEU 188 A LEU 47 1 Y 1 A GLN 189 A GLN 48 1 Y 1 A ALA 190 A ALA 49 1 Y 1 A PRO 191 A PRO 50 1 Y 1 A SER 192 A SER 51 1 Y 1 A ARG 193 A ARG 52 1 Y 1 A GLU 194 A GLU 53 1 Y 1 A GLU 195 A GLU 54 1 Y 1 A ALA 196 A ALA 55 1 Y 1 A ALA 197 A ALA 56 1 Y 1 A LYS 198 A LYS 57 1 Y 1 A TRP 199 A TRP 58 1 Y 1 A SER 200 A SER 59 1 Y 1 A ASP 310 A ASP 169 1 Y 1 A THR 311 A THR 170 1 Y 1 A ALA 312 A ALA 171 1 Y 1 A GLY 313 A GLY 172 1 Y 1 A GLY 314 A GLY 173 1 Y 1 A PHE 315 A PHE 174 1 Y 1 A A OD2 O ASP HOH 163 612 2.13 1 A ARG 203 -164.48 6.58 1 A LYS 234 140.50 -25.30 1 A CYS 301 -102.98 70.72 1 A GLN 317 58.05 87.13 1 A ASP 352 -101.23 64.93 1 A PRO 354 -23.21 120.52 1 A PRO 384 -57.05 -2.16 96.150 60.0612 36.810 0.0100 0.0000 0.0000 0.0100 0.0000 -0.0200 0.9260 0.8940 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.2982 0.2283 0.2316 2.8000 45.8800 450 9443 4.8000 99.8000 1.000 1.000 15.4810 0.3220 RANDOM 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT 1.8110 0.4180 0.8000 0.8000 1.4000 MAXIMUM LIKELIHOOD MASK 2.8000 45.8800 15 2178 36 0 2127 0.3190 0.2590 2.8740 42 640 682 20 99.1300 2.800 50.000 4NY9 9474 0.000 0.115 1 17.000 6.600 99.800 refinement Gerard Bricogne buster-develop@GlobalPhasing.com http://www.globalphasing.com/buster/ BUSTER-TNT program REFMAC 5.2.0019 data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data reduction DENZO data scaling SCALEPACK refinement REFMAC 5.2.0019 Crystal Structure Of the Human PXR-LBD In Complex With N-{(2R)-1-[(4S)-4-(4-chlorophenyl)-4-hydroxy-3,3-dimethylpiperidin-1-yl]-3-methyl-1-oxobutan-2-yl}-3-hydroxy-3-methylbutanamide 1 N N 2 N N 3 N N 4 N N A THR 144 A THR 3 HELX_P A PHE 162 A PHE 21 1 1 19 A ARG 203 A ARG 62 HELX_P A SER 208 A SER 67 1 2 6 A LYS 234 A LYS 93 HELX_P A SER 238 A SER 97 5 3 5 A LEU 239 A LEU 98 HELX_P A VAL 260 A VAL 119 1 4 22 A ILE 261 A ILE 120 HELX_P A ASP 266 A ASP 125 1 5 6 A PRO 268 A PRO 127 HELX_P A VAL 291 A VAL 150 1 6 24 A GLU 321 A GLU 180 HELX_P A LEU 333 A LEU 192 1 7 13 A HIS 336 A HIS 195 HELX_P A PHE 349 A PHE 208 1 8 14 A GLN 358 A GLN 217 HELX_P A ARG 381 A ARG 240 1 9 24 A PHE 388 A PHE 247 HELX_P A HIS 418 A HIS 277 1 10 31 A THR 422 A THR 281 HELX_P A GLY 430 A GLY 289 1 11 9 TRANSCRIPTION/TRANSCRIPTION inhibitor pregnane X receptor, PXR, ligand binding domain, steroid receptor coactivator-1; CCR1, Chemokine Receptor-1; NR, nuclear receptor; AF, activation function; MDR1, multi-drug resistance gene-1, TRANSCRIPTION-TRANSCRIPTION inhibitor complex NR1I2_HUMAN UNP 1 142 O75469 GLTEEQRMMIRELMDAQMKTFDTTFSHFKNFRLPGVLSSGCELPESLQAPSREEAAKWSQVRKDLCSLKVSLQLRGEDGS VWNYKPPADSGGKEIFSLLPHMADMSTYMFKGIISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAETGTWEC GRLSYCLEDTAGGFQQLLLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNR PQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELFGI 142 431 4NY9 142 431 O75469 A 1 1 290 5 anti-parallel anti-parallel anti-parallel anti-parallel A VAL 222 A VAL 81 A TYR 225 A TYR 84 A VAL 211 A VAL 70 A ARG 216 A ARG 75 A LEU 304 A LEU 163 A LEU 308 A LEU 167 A THR 298 A THR 157 A CYS 301 A CYS 160 A PHE 292 A PHE 151 A ASN 293 A ASN 152 BINDING SITE FOR RESIDUE 2Q4 A 501 A 2Q4 501 Software 9 BINDING SITE FOR RESIDUE GOL A 502 A GOL 502 Software 7 A VAL 211 A VAL 70 9 1_555 A MET 243 A MET 102 9 1_555 A ALA 244 A ALA 103 9 1_555 A GLN 285 A GLN 144 9 1_555 A PHE 288 A PHE 147 9 1_555 A TRP 299 A TRP 158 9 1_555 A TYR 306 A TYR 165 9 1_555 A HIS 407 A HIS 266 9 1_555 A HOH 605 D HOH 9 1_555 A THR 161 A THR 20 7 1_555 A PHE 162 A PHE 21 7 1_555 A ASP 163 A ASP 22 7 1_555 A TYR 249 A TYR 108 7 1_555 A MET 250 A MET 109 7 1_555 A GLY 253 A GLY 112 7 1_555 A ARG 287 A ARG 146 7 1_555 96 P 43 21 2