0.011222 0.000000 0.000000 -0.000000 0.008998 0.000000 0.000000 -0.000000 0.024214 0.00000 0.00000 0.00000 Wang, H. Shears, S.B. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 89.110 111.133 41.299 C20 H28 O18 P4 680.321 (1R,2R,3r,4S,5S,6s)-3,6-bis(benzyloxy)cyclohexane-1,2,4,5-tetrayl tetrakis[dihydrogen (phosphate)] non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C10 H17 N6 O12 P3 506.196 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER non-polymer C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Y 1 N C Y 2 N C Y 3 N C Y 4 N C Y 5 N C Y 6 N C N 7 N C N 8 N O N 9 N C N 10 R C N 11 N O N 12 N P N 13 N O N 14 N O N 15 N O N 16 R C N 17 N O N 18 N P N 19 N O N 20 N O N 21 N O N 22 S C N 23 N O N 24 N P N 25 N O N 26 N O N 27 N O N 28 S C N 29 N O N 30 N P N 31 N O N 32 N O N 33 N O N 34 N C N 35 N O N 36 N C Y 37 N C Y 38 N C Y 39 N C Y 40 N C Y 41 N C Y 42 N C N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N N N 72 S C N 73 N C N 74 N O N 75 N C N 76 N O N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N P N 85 N O N 86 N O N 87 N O N 88 N P N 89 N O N 90 N O N 91 N N N 92 N P N 93 N O N 94 N O N 95 N O N 96 N O N 97 N C N 98 R C N 99 N O N 100 S C N 101 N O N 102 R C N 103 N O N 104 R C Y 105 N N Y 106 N C Y 107 N N Y 108 N C Y 109 N C N 110 N N Y 111 N N Y 112 N C Y 113 N N Y 114 N C N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N N N 133 S C N 134 N C N 135 N O N 136 N C N 137 N C N 138 N C N 139 N N N 140 N C N 141 N N N 142 N N N 143 N O N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N N N 160 S C N 161 N C N 162 N O N 163 N C N 164 N C N 165 N O N 166 N N N 167 N O N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N N N 177 S C N 178 N C N 179 N O N 180 N C N 181 N C N 182 N O N 183 N O N 184 N O N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N N N 193 R C N 194 N C N 195 N O N 196 N C N 197 N S N 198 N O N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N N N 207 S C N 208 N C N 209 N O N 210 N C N 211 N C N 212 N C N 213 N O N 214 N N N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N N N 227 S C N 228 N C N 229 N O N 230 N C N 231 N C N 232 N C N 233 N O N 234 N O N 235 N O N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N N N 246 N C N 247 N C N 248 N O N 249 N O N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N N N 256 S C N 257 N C N 258 N O N 259 N C Y 260 N C Y 261 N N Y 262 N C Y 263 N C Y 264 N N N 265 N O N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N O N 277 N H N 278 N H N 279 N N N 280 S C N 281 N C N 282 N O N 283 S C N 284 N C N 285 N C N 286 N C N 287 N O N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N N N 302 S C N 303 N C N 304 N O N 305 N C N 306 N C N 307 N C N 308 N C N 309 N O N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 N C N 328 N C N 329 N C N 330 N C N 331 N N N 332 N O N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C N 353 N C N 354 N S N 355 N C N 356 N O N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N MG N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C Y 374 N C Y 375 N C Y 376 N C Y 377 N C Y 378 N C Y 379 N C N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N N N 393 S C N 394 N C N 395 N O N 396 N C N 397 N C N 398 N C N 399 N O N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N N N 410 S C N 411 N C N 412 N O N 413 N C N 414 N O N 415 N O N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N N N 424 S C N 425 N C N 426 N O N 427 R C N 428 N O N 429 N C N 430 N O N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N N N 441 S C N 442 N C N 443 N O N 444 N C Y 445 N C Y 446 N C Y 447 N C Y 448 N N Y 449 N C Y 450 N C Y 451 N C Y 452 N C Y 453 N C N 454 N O N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N N N 468 S C N 469 N C N 470 N O N 471 N C Y 472 N C Y 473 N C Y 474 N C Y 475 N C Y 476 N C Y 477 N C N 478 N O N 479 N O N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N N N 492 S C N 493 N C N 494 N O N 495 N C N 496 N C N 497 N C N 498 N O N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H Y 1 N doub Y 2 N sing Y 3 N sing Y 4 N doub N 5 N doub Y 6 N doub N 7 N sing Y 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N doub N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N doub N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing Y 34 N doub Y 35 N sing Y 36 N sing N 37 N sing Y 38 N doub N 39 N sing Y 40 N doub Y 41 N sing N 42 N doub N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N doub N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing Y 120 N sing Y 121 N sing Y 122 N doub N 123 N sing Y 124 N sing Y 125 N sing Y 126 N doub N 127 N sing Y 128 N doub N 129 N sing N 130 N sing Y 131 N sing Y 132 N doub N 133 N sing Y 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N doub N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N doub N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N doub N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing Y 262 N sing Y 263 N doub Y 264 N doub N 265 N sing Y 266 N sing N 267 N sing Y 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N doub N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N doub N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N doub N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N doub N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N doub N 366 N sing N 367 N sing N 368 N sing N 369 N sing Y 370 N doub Y 371 N sing Y 372 N sing N 373 N sing Y 374 N doub N 375 N sing Y 376 N doub N 377 N sing Y 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N doub N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N doub N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N doub N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N doub N 435 N sing N 436 N sing N 437 N sing N 438 N sing Y 439 N doub Y 440 N sing Y 441 N sing N 442 N sing Y 443 N doub Y 444 N sing Y 445 N sing N 446 N sing Y 447 N sing Y 448 N doub N 449 N sing Y 450 N doub N 451 N sing Y 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N doub N 463 N sing N 464 N sing N 465 N sing N 466 N sing Y 467 N doub Y 468 N sing Y 469 N sing N 470 N sing Y 471 N doub N 472 N sing Y 473 N doub N 474 N sing Y 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N doub N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing UK Chem.Biol. CBOLE2 2050 1074-5521 21 689 699 10.1016/j.chembiol.2014.03.009 24768307 Synthetic Inositol Phosphate Analogs Reveal that PPIP5K2 Has a Surface-Mounted Substrate Capture Site that Is a Target for Drug Discovery. 2014 10.2210/pdb4nzo/pdb pdb_00004nzo 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2013-07-27 MARMOSAIC 225 mm CCD SAGITALLY FOCUSED Si(111) SINGLE WAVELENGTH M x-ray 1 1.0 1.0 22-BM APS 1.0 SYNCHROTRON APS BEAMLINE 22-BM 37568.891 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 2.7.4.21, 2.7.4.24 ATP-grasp Kinase domain, UNP residues 41-366 1 man polymer 506.196 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER 1 syn non-polymer 680.321 (1R,2R,3r,4S,5S,6s)-3,6-bis(benzyloxy)cyclohexane-1,2,4,5-tetrayl tetrakis[dihydrogen (phosphate)] 1 syn non-polymer 24.305 MAGNESIUM ION 3 syn non-polymer 18.015 water 342 nat water Diphosphoinositol pentakisphosphate kinase 2, Histidine acid phosphatase domain-containing protein 1, InsP6 and PP-IP5 kinase 2, VIP1 homolog 2, hsVIP2 no no GSFTERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKL RNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNV YIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSE GKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHI PWSIPLEAED GSFTERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKL RNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNV YIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSE GKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHI PWSIPLEAED A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample PPIP5K2, HISPPD1, KIAA0433, VIP2 9606 Homo sapiens 562 Escherichia coli Arctic Express (DE3) plasmid pDest566 1 2.72 54.81 VAPOR DIFFUSION, HANGING DROP 7.0 12% (w/v) PEG 3350, 20 mM MgCl2, 0.1 M HEPES, pH 7.0, 1 mM AMPPNP with 2 mM CdCl2 Soaking under 22% PEG3350, 10 mM MgCl2 0.1 M HEPES, pH7.0 with 10 mM 2, 5-di-O-Bn-InsP4, 3 days, VAPOR DIFFUSION, HANGING DROP, temperature 277K 277 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Database references Data collection Database references Derived calculations Refinement description 1 0 2014-04-02 1 1 2014-06-11 1 2 2023-09-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2013-12-12 REL REL ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER 2OV (1R,2R,3r,4S,5S,6s)-3,6-bis(benzyloxy)cyclohexane-1,2,4,5-tetrayl tetrakis[dihydrogen (phosphate)] MG MAGNESIUM ION HOH water 3T9B PDB entry 3T9B PDB experimental model ANP 401 2 ANP ANP 401 A DBN 501 3 2OV 2OV 402 A MG 601 4 MG MG 403 A MG 602 4 MG MG 404 A MG 603 4 MG MG 405 A HOH 1 5 HOH HOH 501 A HOH 2 5 HOH HOH 502 A HOH 3 5 HOH HOH 503 A HOH 4 5 HOH HOH 504 A HOH 5 5 HOH HOH 505 A HOH 6 5 HOH HOH 506 A HOH 7 5 HOH HOH 507 A HOH 8 5 HOH HOH 508 A HOH 9 5 HOH HOH 509 A HOH 10 5 HOH HOH 510 A HOH 11 5 HOH HOH 511 A HOH 12 5 HOH HOH 512 A HOH 13 5 HOH HOH 513 A HOH 14 5 HOH HOH 514 A HOH 15 5 HOH HOH 515 A HOH 16 5 HOH HOH 516 A HOH 17 5 HOH HOH 517 A HOH 18 5 HOH HOH 518 A HOH 19 5 HOH HOH 519 A HOH 20 5 HOH HOH 520 A HOH 21 5 HOH HOH 521 A HOH 22 5 HOH HOH 522 A HOH 23 5 HOH HOH 523 A HOH 24 5 HOH HOH 524 A HOH 25 5 HOH HOH 525 A HOH 26 5 HOH HOH 526 A HOH 27 5 HOH HOH 527 A HOH 28 5 HOH HOH 528 A HOH 29 5 HOH HOH 529 A HOH 30 5 HOH HOH 530 A HOH 31 5 HOH HOH 531 A HOH 32 5 HOH HOH 532 A HOH 33 5 HOH HOH 533 A HOH 34 5 HOH HOH 534 A HOH 35 5 HOH HOH 535 A HOH 36 5 HOH HOH 536 A HOH 37 5 HOH HOH 537 A HOH 38 5 HOH HOH 538 A HOH 39 5 HOH HOH 539 A HOH 40 5 HOH HOH 540 A HOH 41 5 HOH HOH 541 A HOH 42 5 HOH HOH 542 A HOH 43 5 HOH HOH 543 A HOH 44 5 HOH HOH 544 A HOH 45 5 HOH HOH 545 A HOH 46 5 HOH HOH 546 A HOH 47 5 HOH HOH 547 A HOH 48 5 HOH HOH 548 A HOH 49 5 HOH HOH 549 A HOH 50 5 HOH HOH 550 A HOH 51 5 HOH HOH 551 A HOH 52 5 HOH HOH 552 A HOH 53 5 HOH HOH 553 A HOH 54 5 HOH HOH 554 A HOH 55 5 HOH HOH 555 A HOH 56 5 HOH HOH 556 A HOH 57 5 HOH HOH 557 A HOH 58 5 HOH HOH 558 A HOH 59 5 HOH HOH 559 A HOH 60 5 HOH HOH 560 A HOH 61 5 HOH HOH 561 A HOH 62 5 HOH HOH 562 A HOH 63 5 HOH HOH 563 A HOH 64 5 HOH HOH 564 A HOH 65 5 HOH HOH 565 A HOH 66 5 HOH HOH 566 A HOH 67 5 HOH HOH 567 A HOH 68 5 HOH HOH 568 A HOH 69 5 HOH HOH 569 A HOH 70 5 HOH HOH 570 A HOH 71 5 HOH HOH 571 A HOH 72 5 HOH HOH 572 A HOH 73 5 HOH HOH 573 A HOH 74 5 HOH HOH 574 A HOH 75 5 HOH HOH 575 A HOH 76 5 HOH HOH 576 A HOH 77 5 HOH HOH 577 A HOH 78 5 HOH HOH 578 A HOH 79 5 HOH HOH 579 A HOH 80 5 HOH HOH 580 A HOH 81 5 HOH HOH 581 A HOH 82 5 HOH HOH 582 A HOH 83 5 HOH HOH 583 A HOH 84 5 HOH HOH 584 A HOH 85 5 HOH HOH 585 A HOH 86 5 HOH HOH 586 A HOH 87 5 HOH HOH 587 A HOH 88 5 HOH HOH 588 A HOH 89 5 HOH HOH 589 A HOH 90 5 HOH HOH 590 A HOH 91 5 HOH HOH 591 A HOH 92 5 HOH HOH 592 A HOH 93 5 HOH HOH 593 A HOH 94 5 HOH HOH 594 A HOH 95 5 HOH HOH 595 A HOH 96 5 HOH HOH 596 A HOH 97 5 HOH HOH 597 A HOH 98 5 HOH HOH 598 A HOH 99 5 HOH HOH 599 A HOH 100 5 HOH HOH 600 A HOH 101 5 HOH HOH 601 A HOH 102 5 HOH HOH 602 A HOH 103 5 HOH HOH 603 A HOH 104 5 HOH HOH 604 A HOH 105 5 HOH HOH 605 A HOH 106 5 HOH HOH 606 A HOH 107 5 HOH HOH 607 A HOH 108 5 HOH HOH 608 A HOH 109 5 HOH HOH 609 A HOH 110 5 HOH HOH 610 A HOH 111 5 HOH HOH 611 A HOH 112 5 HOH HOH 612 A HOH 113 5 HOH HOH 613 A HOH 114 5 HOH HOH 614 A HOH 115 5 HOH HOH 615 A HOH 116 5 HOH HOH 616 A HOH 117 5 HOH HOH 617 A HOH 118 5 HOH HOH 618 A HOH 119 5 HOH HOH 619 A HOH 120 5 HOH HOH 620 A HOH 121 5 HOH HOH 621 A HOH 122 5 HOH HOH 622 A HOH 123 5 HOH HOH 623 A HOH 124 5 HOH HOH 624 A HOH 125 5 HOH HOH 625 A HOH 126 5 HOH HOH 626 A HOH 127 5 HOH HOH 627 A HOH 128 5 HOH HOH 628 A HOH 129 5 HOH HOH 629 A HOH 130 5 HOH HOH 630 A HOH 131 5 HOH HOH 631 A HOH 132 5 HOH HOH 632 A HOH 133 5 HOH HOH 633 A HOH 134 5 HOH HOH 634 A HOH 135 5 HOH HOH 635 A HOH 136 5 HOH HOH 636 A HOH 137 5 HOH HOH 637 A HOH 138 5 HOH HOH 638 A HOH 139 5 HOH HOH 639 A HOH 140 5 HOH HOH 640 A HOH 141 5 HOH HOH 641 A HOH 142 5 HOH HOH 642 A HOH 143 5 HOH HOH 643 A HOH 144 5 HOH HOH 644 A HOH 145 5 HOH HOH 645 A HOH 146 5 HOH HOH 646 A HOH 147 5 HOH HOH 647 A HOH 148 5 HOH HOH 648 A HOH 149 5 HOH HOH 649 A HOH 150 5 HOH HOH 650 A HOH 151 5 HOH HOH 651 A HOH 152 5 HOH HOH 652 A HOH 153 5 HOH HOH 653 A HOH 154 5 HOH HOH 654 A HOH 155 5 HOH HOH 655 A HOH 156 5 HOH HOH 656 A HOH 157 5 HOH HOH 657 A HOH 158 5 HOH HOH 658 A HOH 159 5 HOH HOH 659 A HOH 160 5 HOH HOH 660 A HOH 161 5 HOH HOH 661 A HOH 162 5 HOH HOH 662 A HOH 163 5 HOH HOH 663 A HOH 164 5 HOH HOH 664 A HOH 165 5 HOH HOH 665 A HOH 166 5 HOH HOH 666 A HOH 167 5 HOH HOH 667 A HOH 168 5 HOH HOH 668 A HOH 169 5 HOH HOH 669 A HOH 170 5 HOH HOH 670 A HOH 171 5 HOH HOH 671 A HOH 172 5 HOH HOH 672 A HOH 173 5 HOH HOH 673 A HOH 174 5 HOH HOH 674 A HOH 175 5 HOH HOH 675 A HOH 176 5 HOH HOH 676 A HOH 177 5 HOH HOH 677 A HOH 178 5 HOH HOH 678 A HOH 179 5 HOH HOH 679 A HOH 180 5 HOH HOH 680 A HOH 181 5 HOH HOH 681 A HOH 182 5 HOH HOH 682 A HOH 183 5 HOH HOH 683 A HOH 184 5 HOH HOH 684 A HOH 185 5 HOH HOH 685 A HOH 186 5 HOH HOH 686 A HOH 187 5 HOH HOH 687 A HOH 188 5 HOH HOH 688 A HOH 189 5 HOH HOH 689 A HOH 190 5 HOH HOH 690 A HOH 191 5 HOH HOH 691 A HOH 192 5 HOH HOH 692 A HOH 193 5 HOH HOH 693 A HOH 194 5 HOH HOH 694 A HOH 195 5 HOH HOH 695 A HOH 196 5 HOH HOH 696 A HOH 197 5 HOH HOH 697 A HOH 198 5 HOH HOH 698 A HOH 199 5 HOH HOH 699 A HOH 200 5 HOH HOH 700 A HOH 201 5 HOH HOH 701 A HOH 202 5 HOH HOH 702 A HOH 203 5 HOH HOH 703 A HOH 204 5 HOH HOH 704 A HOH 205 5 HOH HOH 705 A HOH 206 5 HOH HOH 706 A HOH 207 5 HOH HOH 707 A HOH 208 5 HOH HOH 708 A HOH 209 5 HOH HOH 709 A HOH 210 5 HOH HOH 710 A HOH 211 5 HOH HOH 711 A HOH 212 5 HOH HOH 712 A HOH 213 5 HOH HOH 713 A HOH 214 5 HOH HOH 714 A HOH 215 5 HOH HOH 715 A HOH 216 5 HOH HOH 716 A HOH 217 5 HOH HOH 717 A HOH 218 5 HOH HOH 718 A HOH 219 5 HOH HOH 719 A HOH 220 5 HOH HOH 720 A HOH 221 5 HOH HOH 721 A HOH 222 5 HOH HOH 722 A HOH 223 5 HOH HOH 723 A HOH 224 5 HOH HOH 724 A HOH 225 5 HOH HOH 725 A HOH 226 5 HOH HOH 726 A HOH 227 5 HOH HOH 727 A HOH 228 5 HOH HOH 728 A HOH 229 5 HOH HOH 729 A HOH 230 5 HOH HOH 730 A HOH 231 5 HOH HOH 731 A HOH 232 5 HOH HOH 732 A HOH 233 5 HOH HOH 733 A HOH 234 5 HOH HOH 734 A HOH 235 5 HOH HOH 735 A HOH 236 5 HOH HOH 736 A HOH 237 5 HOH HOH 737 A HOH 238 5 HOH HOH 738 A HOH 239 5 HOH HOH 739 A HOH 240 5 HOH HOH 740 A HOH 241 5 HOH HOH 741 A HOH 242 5 HOH HOH 742 A HOH 243 5 HOH HOH 743 A HOH 244 5 HOH HOH 744 A HOH 245 5 HOH HOH 745 A HOH 246 5 HOH HOH 746 A HOH 247 5 HOH HOH 747 A HOH 248 5 HOH HOH 748 A HOH 249 5 HOH HOH 749 A HOH 250 5 HOH HOH 750 A HOH 251 5 HOH HOH 751 A HOH 252 5 HOH HOH 752 A HOH 253 5 HOH HOH 753 A HOH 254 5 HOH HOH 754 A HOH 255 5 HOH HOH 755 A HOH 256 5 HOH HOH 756 A HOH 257 5 HOH HOH 757 A HOH 258 5 HOH HOH 758 A HOH 259 5 HOH HOH 759 A HOH 260 5 HOH HOH 760 A HOH 261 5 HOH HOH 761 A HOH 262 5 HOH HOH 762 A HOH 263 5 HOH HOH 763 A HOH 264 5 HOH HOH 764 A HOH 265 5 HOH HOH 765 A HOH 266 5 HOH HOH 766 A HOH 267 5 HOH HOH 767 A HOH 268 5 HOH HOH 768 A HOH 269 5 HOH HOH 769 A HOH 270 5 HOH HOH 770 A HOH 271 5 HOH HOH 771 A HOH 272 5 HOH HOH 772 A HOH 273 5 HOH HOH 773 A HOH 274 5 HOH HOH 774 A HOH 275 5 HOH HOH 775 A HOH 276 5 HOH HOH 776 A HOH 277 5 HOH HOH 777 A HOH 278 5 HOH HOH 778 A HOH 279 5 HOH HOH 779 A HOH 280 5 HOH HOH 780 A HOH 281 5 HOH HOH 781 A HOH 282 5 HOH HOH 782 A HOH 283 5 HOH HOH 783 A HOH 284 5 HOH HOH 784 A HOH 285 5 HOH HOH 785 A HOH 286 5 HOH HOH 786 A HOH 287 5 HOH HOH 787 A HOH 288 5 HOH HOH 788 A HOH 289 5 HOH HOH 789 A HOH 290 5 HOH HOH 790 A HOH 291 5 HOH HOH 791 A HOH 292 5 HOH HOH 792 A HOH 293 5 HOH HOH 793 A HOH 294 5 HOH HOH 794 A HOH 295 5 HOH HOH 795 A HOH 296 5 HOH HOH 796 A HOH 297 5 HOH HOH 797 A HOH 298 5 HOH HOH 798 A HOH 299 5 HOH HOH 799 A HOH 300 5 HOH HOH 800 A HOH 301 5 HOH HOH 801 A HOH 302 5 HOH HOH 802 A HOH 303 5 HOH HOH 803 A HOH 304 5 HOH HOH 804 A HOH 305 5 HOH HOH 805 A HOH 306 5 HOH HOH 806 A HOH 307 5 HOH HOH 807 A HOH 308 5 HOH HOH 808 A HOH 309 5 HOH HOH 809 A HOH 310 5 HOH HOH 810 A HOH 311 5 HOH HOH 811 A HOH 312 5 HOH HOH 812 A HOH 313 5 HOH HOH 813 A HOH 314 5 HOH HOH 814 A HOH 315 5 HOH HOH 815 A HOH 316 5 HOH HOH 816 A HOH 317 5 HOH HOH 817 A HOH 318 5 HOH HOH 818 A HOH 319 5 HOH HOH 819 A HOH 320 5 HOH HOH 820 A HOH 321 5 HOH HOH 821 A HOH 322 5 HOH HOH 822 A HOH 323 5 HOH HOH 823 A HOH 324 5 HOH HOH 824 A HOH 325 5 HOH HOH 825 A HOH 326 5 HOH HOH 826 A HOH 327 5 HOH HOH 827 A HOH 328 5 HOH HOH 828 A HOH 329 5 HOH HOH 829 A HOH 330 5 HOH HOH 830 A HOH 331 5 HOH HOH 831 A HOH 332 5 HOH HOH 832 A HOH 333 5 HOH HOH 833 A HOH 334 5 HOH HOH 834 A HOH 335 5 HOH HOH 835 A HOH 336 5 HOH HOH 836 A HOH 337 5 HOH HOH 837 A HOH 338 5 HOH HOH 838 A HOH 339 5 HOH HOH 839 A HOH 340 5 HOH HOH 840 A HOH 341 5 HOH HOH 841 A HOH 342 5 HOH HOH 842 A n 1 37 A n 2 38 A n 3 39 A n 4 40 A n 5 41 A ARG 42 n 6 ARG 42 A GLN 43 n 7 GLN 43 A ILE 44 n 8 ILE 44 A VAL 45 n 9 VAL 45 A VAL 46 n 10 VAL 46 A GLY 47 n 11 GLY 47 A ILE 48 n 12 ILE 48 A CYS 49 n 13 CYS 49 A SER 50 n 14 SER 50 A MET 51 n 15 MET 51 A ALA 52 n 16 ALA 52 A LYS 53 n 17 LYS 53 A LYS 54 n 18 LYS 54 A SER 55 n 19 SER 55 A LYS 56 n 20 LYS 56 A SER 57 n 21 SER 57 A LYS 58 n 22 LYS 58 A PRO 59 n 23 PRO 59 A MET 60 n 24 MET 60 A LYS 61 n 25 LYS 61 A GLU 62 n 26 GLU 62 A ILE 63 n 27 ILE 63 A LEU 64 n 28 LEU 64 A GLU 65 n 29 GLU 65 A ARG 66 n 30 ARG 66 A ILE 67 n 31 ILE 67 A SER 68 n 32 SER 68 A LEU 69 n 33 LEU 69 A PHE 70 n 34 PHE 70 A LYS 71 n 35 LYS 71 A TYR 72 n 36 TYR 72 A ILE 73 n 37 ILE 73 A THR 74 n 38 THR 74 A VAL 75 n 39 VAL 75 A VAL 76 n 40 VAL 76 A VAL 77 n 41 VAL 77 A PHE 78 n 42 PHE 78 A GLU 79 n 43 GLU 79 A GLU 80 n 44 GLU 80 A GLU 81 n 45 GLU 81 A VAL 82 n 46 VAL 82 A ILE 83 n 47 ILE 83 A LEU 84 n 48 LEU 84 A ASN 85 n 49 ASN 85 A GLU 86 n 50 GLU 86 A PRO 87 n 51 PRO 87 A VAL 88 n 52 VAL 88 A GLU 89 n 53 GLU 89 A ASN 90 n 54 ASN 90 A TRP 91 n 55 TRP 91 A PRO 92 n 56 PRO 92 A LEU 93 n 57 LEU 93 A CYS 94 n 58 CYS 94 A ASP 95 n 59 ASP 95 A CYS 96 n 60 CYS 96 A LEU 97 n 61 LEU 97 A ILE 98 n 62 ILE 98 A SER 99 n 63 SER 99 A PHE 100 n 64 PHE 100 A HIS 101 n 65 HIS 101 A SER 102 n 66 SER 102 A LYS 103 n 67 LYS 103 A GLY 104 n 68 GLY 104 A PHE 105 n 69 PHE 105 A PRO 106 n 70 PRO 106 A LEU 107 n 71 LEU 107 A ASP 108 n 72 ASP 108 A LYS 109 n 73 LYS 109 A ALA 110 n 74 ALA 110 A VAL 111 n 75 VAL 111 A ALA 112 n 76 ALA 112 A TYR 113 n 77 TYR 113 A ALA 114 n 78 ALA 114 A LYS 115 n 79 LYS 115 A LEU 116 n 80 LEU 116 A ARG 117 n 81 ARG 117 A ASN 118 n 82 ASN 118 A PRO 119 n 83 PRO 119 A PHE 120 n 84 PHE 120 A VAL 121 n 85 VAL 121 A ILE 122 n 86 ILE 122 A ASN 123 n 87 ASN 123 A ASP 124 n 88 ASP 124 A LEU 125 n 89 LEU 125 A ASN 126 n 90 ASN 126 A MET 127 n 91 MET 127 A GLN 128 n 92 GLN 128 A TYR 129 n 93 TYR 129 A LEU 130 n 94 LEU 130 A ILE 131 n 95 ILE 131 A GLN 132 n 96 GLN 132 A ASP 133 n 97 ASP 133 A ARG 134 n 98 ARG 134 A ARG 135 n 99 ARG 135 A GLU 136 n 100 GLU 136 A VAL 137 n 101 VAL 137 A TYR 138 n 102 TYR 138 A SER 139 n 103 SER 139 A ILE 140 n 104 ILE 140 A LEU 141 n 105 LEU 141 A GLN 142 n 106 GLN 142 A ALA 143 n 107 ALA 143 A GLU 144 n 108 GLU 144 A GLY 145 n 109 GLY 145 A ILE 146 n 110 ILE 146 A LEU 147 n 111 LEU 147 A LEU 148 n 112 LEU 148 A PRO 149 n 113 PRO 149 A ARG 150 n 114 ARG 150 A TYR 151 n 115 TYR 151 A ALA 152 n 116 ALA 152 A ILE 153 n 117 ILE 153 A LEU 154 n 118 LEU 154 A ASN 155 n 119 ASN 155 A ARG 156 n 120 ARG 156 A ASP 157 n 121 ASP 157 A PRO 158 n 122 PRO 158 A ASN 159 n 123 ASN 159 A ASN 160 n 124 ASN 160 A PRO 161 n 125 PRO 161 A LYS 162 n 126 LYS 162 A GLU 163 n 127 GLU 163 A CYS 164 n 128 CYS 164 A ASN 165 n 129 ASN 165 A LEU 166 n 130 LEU 166 A ILE 167 n 131 ILE 167 A GLU 168 n 132 GLU 168 A GLY 169 n 133 GLY 169 A GLU 170 n 134 GLU 170 A ASP 171 n 135 ASP 171 A HIS 172 n 136 HIS 172 A VAL 173 n 137 VAL 173 A GLU 174 n 138 GLU 174 A VAL 175 n 139 VAL 175 A ASN 176 n 140 ASN 176 A GLY 177 n 141 GLY 177 A GLU 178 n 142 GLU 178 A VAL 179 n 143 VAL 179 A PHE 180 n 144 PHE 180 A GLN 181 n 145 GLN 181 A LYS 182 n 146 LYS 182 A PRO 183 n 147 PRO 183 A PHE 184 n 148 PHE 184 A VAL 185 n 149 VAL 185 A GLU 186 n 150 GLU 186 A LYS 187 n 151 LYS 187 A PRO 188 n 152 PRO 188 A VAL 189 n 153 VAL 189 A SER 190 n 154 SER 190 A ALA 191 n 155 ALA 191 A GLU 192 n 156 GLU 192 A ASP 193 n 157 ASP 193 A HIS 194 n 158 HIS 194 A ASN 195 n 159 ASN 195 A VAL 196 n 160 VAL 196 A TYR 197 n 161 TYR 197 A ILE 198 n 162 ILE 198 A TYR 199 n 163 TYR 199 A TYR 200 n 164 TYR 200 A PRO 201 n 165 PRO 201 A THR 202 n 166 THR 202 A SER 203 n 167 SER 203 A ALA 204 n 168 ALA 204 A GLY 205 n 169 GLY 205 A GLY 206 n 170 GLY 206 A GLY 207 n 171 GLY 207 A SER 208 n 172 SER 208 A GLN 209 n 173 GLN 209 A ARG 210 n 174 ARG 210 A LEU 211 n 175 LEU 211 A PHE 212 n 176 PHE 212 A ARG 213 n 177 ARG 213 A LYS 214 n 178 LYS 214 A ILE 215 n 179 ILE 215 A GLY 216 n 180 GLY 216 A SER 217 n 181 SER 217 A ARG 218 n 182 ARG 218 A SER 219 n 183 SER 219 A SER 220 n 184 SER 220 A VAL 221 n 185 VAL 221 A TYR 222 n 186 TYR 222 A SER 223 n 187 SER 223 A PRO 224 n 188 PRO 224 A GLU 225 n 189 GLU 225 A SER 226 n 190 SER 226 A ASN 227 n 191 ASN 227 A VAL 228 n 192 VAL 228 A ARG 229 n 193 ARG 229 A LYS 230 n 194 LYS 230 A THR 231 n 195 THR 231 A GLY 232 n 196 GLY 232 A SER 233 n 197 SER 233 A TYR 234 n 198 TYR 234 A ILE 235 n 199 ILE 235 A TYR 236 n 200 TYR 236 A GLU 237 n 201 GLU 237 A GLU 238 n 202 GLU 238 A PHE 239 n 203 PHE 239 A MET 240 n 204 MET 240 A PRO 241 n 205 PRO 241 A THR 242 n 206 THR 242 A ASP 243 n 207 ASP 243 A GLY 244 n 208 GLY 244 A THR 245 n 209 THR 245 A ASP 246 n 210 ASP 246 A VAL 247 n 211 VAL 247 A LYS 248 n 212 LYS 248 A VAL 249 n 213 VAL 249 A TYR 250 n 214 TYR 250 A THR 251 n 215 THR 251 A VAL 252 n 216 VAL 252 A GLY 253 n 217 GLY 253 A PRO 254 n 218 PRO 254 A ASP 255 n 219 ASP 255 A TYR 256 n 220 TYR 256 A ALA 257 n 221 ALA 257 A HIS 258 n 222 HIS 258 A ALA 259 n 223 ALA 259 A GLU 260 n 224 GLU 260 A ALA 261 n 225 ALA 261 A ARG 262 n 226 ARG 262 A LYS 263 n 227 LYS 263 A SER 264 n 228 SER 264 A PRO 265 n 229 PRO 265 A ALA 266 n 230 ALA 266 A LEU 267 n 231 LEU 267 A ASP 268 n 232 ASP 268 A GLY 269 n 233 GLY 269 A LYS 270 n 234 LYS 270 A VAL 271 n 235 VAL 271 A GLU 272 n 236 GLU 272 A ARG 273 n 237 ARG 273 A ASP 274 n 238 ASP 274 A SER 275 n 239 SER 275 A GLU 276 n 240 GLU 276 A GLY 277 n 241 GLY 277 A LYS 278 n 242 LYS 278 A GLU 279 n 243 GLU 279 A VAL 280 n 244 VAL 280 A ARG 281 n 245 ARG 281 A TYR 282 n 246 TYR 282 A PRO 283 n 247 PRO 283 A VAL 284 n 248 VAL 284 A ILE 285 n 249 ILE 285 A LEU 286 n 250 LEU 286 A ASN 287 n 251 ASN 287 A ALA 288 n 252 ALA 288 A ARG 289 n 253 ARG 289 A GLU 290 n 254 GLU 290 A LYS 291 n 255 LYS 291 A LEU 292 n 256 LEU 292 A ILE 293 n 257 ILE 293 A ALA 294 n 258 ALA 294 A TRP 295 n 259 TRP 295 A LYS 296 n 260 LYS 296 A VAL 297 n 261 VAL 297 A CYS 298 n 262 CYS 298 A LEU 299 n 263 LEU 299 A ALA 300 n 264 ALA 300 A PHE 301 n 265 PHE 301 A LYS 302 n 266 LYS 302 A GLN 303 n 267 GLN 303 A THR 304 n 268 THR 304 A VAL 305 n 269 VAL 305 A CYS 306 n 270 CYS 306 A GLY 307 n 271 GLY 307 A PHE 308 n 272 PHE 308 A ASP 309 n 273 ASP 309 A LEU 310 n 274 LEU 310 A LEU 311 n 275 LEU 311 A ARG 312 n 276 ARG 312 A ALA 313 n 277 ALA 313 A ASN 314 n 278 ASN 314 A GLY 315 n 279 GLY 315 A GLN 316 n 280 GLN 316 A SER 317 n 281 SER 317 A TYR 318 n 282 TYR 318 A VAL 319 n 283 VAL 319 A CYS 320 n 284 CYS 320 A ASP 321 n 285 ASP 321 A VAL 322 n 286 VAL 322 A ASN 323 n 287 ASN 323 A GLY 324 n 288 GLY 324 A PHE 325 n 289 PHE 325 A SER 326 n 290 SER 326 A PHE 327 n 291 PHE 327 A VAL 328 n 292 VAL 328 A LYS 329 n 293 LYS 329 A ASN 330 n 294 ASN 330 A SER 331 n 295 SER 331 A MET 332 n 296 MET 332 A LYS 333 n 297 LYS 333 A TYR 334 n 298 TYR 334 A TYR 335 n 299 TYR 335 A ASP 336 n 300 ASP 336 A ASP 337 n 301 ASP 337 A CYS 338 n 302 CYS 338 A ALA 339 n 303 ALA 339 A LYS 340 n 304 LYS 340 A ILE 341 n 305 ILE 341 A LEU 342 n 306 LEU 342 A GLY 343 n 307 GLY 343 A ASN 344 n 308 ASN 344 A ILE 345 n 309 ILE 345 A VAL 346 n 310 VAL 346 A MET 347 n 311 MET 347 A ARG 348 n 312 ARG 348 A GLU 349 n 313 GLU 349 A LEU 350 n 314 LEU 350 A ALA 351 n 315 ALA 351 A PRO 352 n 316 PRO 352 A GLN 353 n 317 GLN 353 A PHE 354 n 318 PHE 354 A HIS 355 n 319 HIS 355 A ILE 356 n 320 ILE 356 A PRO 357 n 321 PRO 357 A TRP 358 n 322 TRP 358 A SER 359 n 323 SER 359 A ILE 360 n 324 ILE 360 A PRO 361 n 325 PRO 361 A LEU 362 n 326 LEU 362 A GLU 363 n 327 GLU 363 A ALA 364 n 328 ALA 364 A GLU 365 n 329 GLU 365 A ASP 366 n 330 ASP 366 A author_and_software_defined_assembly PISA 1 monomeric A SER 68 A O SER 32 1_555 A MG 405 F MG MG 1_555 A PHE 70 A O PHE 34 1_555 95.3 A SER 68 A O SER 32 1_555 A MG 405 F MG MG 1_555 A ILE 73 A O ILE 37 1_555 129.9 A PHE 70 A O PHE 34 1_555 A MG 405 F MG MG 1_555 A ILE 73 A O ILE 37 1_555 90.5 A SER 68 A O SER 32 1_555 A MG 405 F MG MG 1_555 A HOH 645 G O HOH 1_555 91.1 A PHE 70 A O PHE 34 1_555 A MG 405 F MG MG 1_555 A HOH 645 G O HOH 1_555 171.2 A ILE 73 A O ILE 37 1_555 A MG 405 F MG MG 1_555 A HOH 645 G O HOH 1_555 80.8 A SER 68 A O SER 32 1_555 A MG 405 F MG MG 1_555 A HOH 756 G O HOH 1_555 71.6 A PHE 70 A O PHE 34 1_555 A MG 405 F MG MG 1_555 A HOH 756 G O HOH 1_555 80.4 A ILE 73 A O ILE 37 1_555 A MG 405 F MG MG 1_555 A HOH 756 G O HOH 1_555 157.7 A HOH 645 G O HOH 1_555 A MG 405 F MG MG 1_555 A HOH 756 G O HOH 1_555 107.4 A ASP 309 A OD2 ASP 273 1_555 A MG 404 E MG MG 1_555 A ASP 321 A OD2 ASP 285 1_555 86.9 A ASP 309 A OD2 ASP 273 1_555 A MG 404 E MG MG 1_555 A ANP 401 B O2A ANP 1_555 100.7 A ASP 321 A OD2 ASP 285 1_555 A MG 404 E MG MG 1_555 A ANP 401 B O2A ANP 1_555 98.7 A ASP 309 A OD2 ASP 273 1_555 A MG 404 E MG MG 1_555 A ANP 401 B O1G ANP 1_555 99.8 A ASP 321 A OD2 ASP 285 1_555 A MG 404 E MG MG 1_555 A ANP 401 B O1G ANP 1_555 86.3 A ANP 401 B O2A ANP 1_555 A MG 404 E MG MG 1_555 A ANP 401 B O1G ANP 1_555 159.1 A ASP 309 A OD2 ASP 273 1_555 A MG 404 E MG MG 1_555 A HOH 665 G O HOH 1_555 98.6 A ASP 321 A OD2 ASP 285 1_555 A MG 404 E MG MG 1_555 A HOH 665 G O HOH 1_555 172.7 A ANP 401 B O2A ANP 1_555 A MG 404 E MG MG 1_555 A HOH 665 G O HOH 1_555 85.0 A ANP 401 B O1G ANP 1_555 A MG 404 E MG MG 1_555 A HOH 665 G O HOH 1_555 88.1 A ASP 321 A OD2 ASP 285 1_555 A MG 403 D MG MG 1_555 A ASP 321 A OD1 ASP 285 1_555 53.7 A ASP 321 A OD2 ASP 285 1_555 A MG 403 D MG MG 1_555 A ASN 323 A OD1 ASN 287 1_555 92.3 A ASP 321 A OD1 ASP 285 1_555 A MG 403 D MG MG 1_555 A ASN 323 A OD1 ASN 287 1_555 86.2 A ASP 321 A OD2 ASP 285 1_555 A MG 403 D MG MG 1_555 A ANP 401 B O3G ANP 1_555 94.8 A ASP 321 A OD1 ASP 285 1_555 A MG 403 D MG MG 1_555 A ANP 401 B O3G ANP 1_555 148.2 A ASN 323 A OD1 ASN 287 1_555 A MG 403 D MG MG 1_555 A ANP 401 B O3G ANP 1_555 91.1 A ASP 321 A OD2 ASP 285 1_555 A MG 403 D MG MG 1_555 A ANP 401 B O1B ANP 1_555 79.7 A ASP 321 A OD1 ASP 285 1_555 A MG 403 D MG MG 1_555 A ANP 401 B O1B ANP 1_555 90.2 A ASN 323 A OD1 ASN 287 1_555 A MG 403 D MG MG 1_555 A ANP 401 B O1B ANP 1_555 171.8 A ANP 401 B O3G ANP 1_555 A MG 403 D MG MG 1_555 A ANP 401 B O1B ANP 1_555 88.1 A ASP 321 A OD2 ASP 285 1_555 A MG 403 D MG MG 1_555 A HOH 721 G O HOH 1_555 146.9 A ASP 321 A OD1 ASP 285 1_555 A MG 403 D MG MG 1_555 A HOH 721 G O HOH 1_555 93.3 A ASN 323 A OD1 ASN 287 1_555 A MG 403 D MG MG 1_555 A HOH 721 G O HOH 1_555 83.4 A ANP 401 B O3G ANP 1_555 A MG 403 D MG MG 1_555 A HOH 721 G O HOH 1_555 118.0 A ANP 401 B O1B ANP 1_555 A MG 403 D MG MG 1_555 A HOH 721 G O HOH 1_555 104.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O THR 74 A O THR 38 A N VAL 46 A N VAL 10 A N CYS 49 A N CYS 13 A O ILE 98 A O ILE 62 A N LEU 97 A N LEU 61 A O PHE 120 A O PHE 84 A N LEU 154 A N LEU 118 A O TYR 234 A O TYR 198 A O GLU 237 A O GLU 201 A N VAL 185 A N VAL 149 A N GLU 186 A N GLU 150 A O TYR 197 A O TYR 161 A N ILE 198 A N ILE 162 A O GLN 209 A O GLN 173 A N SER 208 A N SER 172 A O SER 223 A O SER 187 A N ILE 167 A N ILE 131 A O GLU 174 A O GLU 138 A N VAL 173 A N VAL 137 A O PHE 180 A O PHE 144 A O TYR 282 A O TYR 246 A N ALA 261 A N ALA 225 A O GLU 260 A O GLU 224 A N LYS 248 A N LYS 212 A N THR 251 A N THR 215 A O CYS 306 A O CYS 270 A N LEU 311 A N LEU 275 A O TYR 318 A O TYR 282 1 A GLY 37 A GLY 1 1 Y 1 A SER 38 A SER 2 1 Y 1 A PHE 39 A PHE 3 1 Y 1 A THR 40 A THR 4 1 Y 1 A GLU 41 A GLU 5 1 Y 1 A LEU 267 -59.26 -106.74 27.166 0.64 0.00 -0.00 -0.25 -0.00 -0.39 0.954 0.936 0.21542 0.17900 0.18120 0.18120 1.90 35.53 2036 31228 31228 6.1 99.58 RANDOM 1 isotropic THROUGHOUT 0 FOURIER SYNTHESIS 0.140 0.131 0.80 0.80 1.20 PDB entry 3T9B MAXIMUM LIKELIHOOD MASK 1.90 35.53 342 3022 76 0 2604 0.010 0.020 2802 0.000 0.020 2631 1.545 1.998 3816 3.541 3.004 6081 5.554 5.000 338 37.386 24.031 129 13.774 15.000 482 15.108 15.000 19 0.094 0.200 412 0.006 0.021 3133 0.009 0.020 639 1.823 2.442 1331 1.823 2.438 1330 3.001 3.646 1673 3.000 3.650 1674 2.348 2.834 1471 2.347 2.837 1472 3.716 4.143 2143 7.215 21.510 3477 6.964 20.793 3300 0.268 0.222 1.945 139 2171 20 95.30 1.9 50 4NZO 33324 33324 3.0 0 0.073 1 29.3 7.2 99.9 1.9 1.93 3.7 1612 0.460 1 6.4 99.6 data collection HKL-2000 model building CCP4 refinement REFMAC 5.7.0032 data reduction HKL-2000 data scaling HKL-2000 phasing CCP4 Crystal structure of the catalytic domain of PPIP5K2 in complex with AMPPNP and 2,5-DI-O-BN-INSP4 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 5 N N A MET 51 A MET 15 HELX_P A LYS 56 A LYS 20 1 1 6 A SER 57 A SER 21 HELX_P A SER 68 A SER 32 1 2 12 A GLU 79 A GLU 43 HELX_P A GLU 86 A GLU 50 1 3 8 A PRO 87 A PRO 51 HELX_P A TRP 91 A TRP 55 5 4 5 A PRO 106 A PRO 70 HELX_P A ASN 118 A ASN 82 1 5 13 A ASN 126 A ASN 90 HELX_P A ILE 131 A ILE 95 1 6 6 A ASP 133 A ASP 97 HELX_P A GLU 144 A GLU 108 1 7 12 A PRO 201 A PRO 165 HELX_P A GLY 205 A GLY 169 5 8 5 A ASN 287 A ASN 251 HELX_P A PHE 301 A PHE 265 1 9 15 A SER 331 A SER 295 HELX_P A ALA 351 A ALA 315 1 10 21 metalc 2.391 A SER 68 A O SER 32 1_555 A MG 405 F MG MG 1_555 metalc 2.460 A PHE 70 A O PHE 34 1_555 A MG 405 F MG MG 1_555 metalc 2.323 A ILE 73 A O ILE 37 1_555 A MG 405 F MG MG 1_555 metalc 1.848 A ASP 309 A OD2 ASP 273 1_555 A MG 404 E MG MG 1_555 metalc 2.260 A ASP 321 A OD2 ASP 285 1_555 A MG 403 D MG MG 1_555 metalc 2.425 A ASP 321 A OD1 ASP 285 1_555 A MG 403 D MG MG 1_555 metalc 2.292 A ASP 321 A OD2 ASP 285 1_555 A MG 404 E MG MG 1_555 metalc 2.119 A ASN 323 A OD1 ASN 287 1_555 A MG 403 D MG MG 1_555 metalc 1.798 A ANP 401 B O3G ANP 1_555 A MG 403 D MG MG 1_555 metalc 2.222 A ANP 401 B O1B ANP 1_555 A MG 403 D MG MG 1_555 metalc 2.036 A ANP 401 B O2A ANP 1_555 A MG 404 E MG MG 1_555 metalc 2.039 A ANP 401 B O1G ANP 1_555 A MG 404 E MG MG 1_555 metalc 1.722 A MG 403 D MG MG 1_555 A HOH 721 G O HOH 1_555 metalc 2.035 A MG 404 E MG MG 1_555 A HOH 665 G O HOH 1_555 metalc 2.259 A MG 405 F MG MG 1_555 A HOH 645 G O HOH 1_555 metalc 2.662 A MG 405 F MG MG 1_555 A HOH 756 G O HOH 1_555 TRANSFERASE/TRANSFERASE INHIBITOR ATP-grasp Fold, Inositol Pyrophosphate Kinase, kinase, drug discovery, enzymology, inositol pyrophosphates, TRANSFERASE-TRANSFERASE INHIBITOR complex A LYS 182 A LYS 146 1 A PRO 183 A PRO 147 3.44 VIP2_HUMAN UNP 1 41 O43314 ERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPF VINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYY PTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEV RYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSI PLEAED 41 366 4NZO 41 366 O43314 A 1 5 330 1 expression tag GLY 37 4NZO A O43314 UNP 1 1 expression tag SER 38 4NZO A O43314 UNP 2 1 expression tag PHE 39 4NZO A O43314 UNP 3 1 expression tag THR 40 4NZO A O43314 UNP 4 4 6 3 5 parallel parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ILE 73 A ILE 37 A VAL 77 A VAL 41 A ILE 44 A ILE 8 A CYS 49 A CYS 13 A CYS 96 A CYS 60 A SER 99 A SER 63 A PHE 120 A PHE 84 A VAL 121 A VAL 85 A TYR 151 A TYR 115 A LEU 154 A LEU 118 A TYR 234 A TYR 198 A GLU 238 A GLU 202 A PHE 184 A PHE 148 A PRO 188 A PRO 152 A TYR 197 A TYR 161 A TYR 199 A TYR 163 A SER 208 A SER 172 A ILE 215 A ILE 179 A ARG 218 A ARG 182 A SER 223 A SER 187 A LEU 166 A LEU 130 A GLU 168 A GLU 132 A HIS 172 A HIS 136 A VAL 175 A VAL 139 A GLU 178 A GLU 142 A GLN 181 A GLN 145 A TYR 282 A TYR 246 A PRO 283 A PRO 247 A ALA 257 A ALA 221 A LYS 263 A LYS 227 A THR 245 A THR 209 A VAL 252 A VAL 216 A VAL 305 A VAL 269 A ALA 313 A ALA 277 A GLN 316 A GLN 280 A GLY 324 A GLY 288 BINDING SITE FOR RESIDUE ANP A 401 A ANP 401 Software 25 BINDING SITE FOR RESIDUE 2OV A 402 A 2OV 402 Software 9 BINDING SITE FOR RESIDUE MG A 403 A MG 403 Software 4 BINDING SITE FOR RESIDUE MG A 404 A MG 404 Software 4 BINDING SITE FOR RESIDUE MG A 405 A MG 405 Software 5 A ARG 134 A ARG 98 25 1_555 A PRO 149 A PRO 113 25 1_555 A LYS 187 A LYS 151 25 1_555 A HIS 194 A HIS 158 25 1_555 A LEU 211 A LEU 175 25 1_555 A GLU 237 A GLU 201 25 1_555 A GLU 238 A GLU 202 25 1_555 A PHE 239 A PHE 203 25 1_555 A MET 240 A MET 204 25 1_555 A ASP 246 A ASP 210 25 1_555 A LYS 248 A LYS 212 25 1_555 A SER 264 A SER 228 25 1_555 A ASP 309 A ASP 273 25 1_555 A LEU 311 A LEU 275 25 1_555 A CYS 320 A CYS 284 25 1_555 A ASP 321 A ASP 285 25 1_555 A ASN 323 A ASN 287 25 1_555 A MG 403 D MG 25 1_555 A MG 404 E MG 25 1_555 A HOH 568 G HOH 25 1_555 A HOH 575 G HOH 25 1_555 A HOH 665 G HOH 25 1_555 A HOH 721 G HOH 25 1_555 A HOH 804 G HOH 25 1_555 A HOH 836 G HOH 25 1_555 A LYS 53 A LYS 17 9 1_555 A LYS 54 A LYS 18 9 1_555 A HIS 101 A HIS 65 9 1_555 A SER 102 A SER 66 9 1_555 A LYS 103 A LYS 67 9 1_555 A GLU 192 A GLU 156 9 1_555 A ARG 213 A ARG 177 9 1_555 A HOH 767 G HOH 9 1_555 A HOH 813 G HOH 9 1_555 A ASP 321 A ASP 285 4 1_555 A ASN 323 A ASN 287 4 1_555 A ANP 401 B ANP 4 1_555 A HOH 721 G HOH 4 1_555 A ASP 309 A ASP 273 4 1_555 A ASP 321 A ASP 285 4 1_555 A ANP 401 B ANP 4 1_555 A HOH 665 G HOH 4 1_555 A SER 68 A SER 32 5 1_555 A PHE 70 A PHE 34 5 1_555 A ILE 73 A ILE 37 5 1_555 A HOH 645 G HOH 5 1_555 A HOH 756 G HOH 5 1_555 19 P 21 21 21