0.028478 0.000000 0.004322 0.000000 0.014441 0.000000 0.000000 0.000000 0.017898 0.00000 0.00000 0.00000 Wang, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 98.63 90.00 35.114 69.248 56.513 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking O4 P -3 94.971 PHOSPHATE ION non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C4 H10 N O6 P 199.099 n PHOSPHOTHREONINE PHOSPHONOTHREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N P N 274 N O N 275 N O N 276 N O N 277 N O N 278 N N N 279 S C N 280 N C N 281 N O N 282 N C N 283 N C N 284 N C N 285 N O N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N N N 296 S C N 297 N C N 298 N O N 299 N C N 300 N O N 301 N O N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N N N 310 S C N 311 N C N 312 N O N 313 R C N 314 N O N 315 N C N 316 N O N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 R C N 329 N C N 330 N O N 331 N P N 332 N O N 333 N O N 334 N O N 335 N C N 336 N O N 337 N O N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N N Y 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N C N 362 N O N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 N C Y 380 N C Y 381 N C Y 382 N C Y 383 N C Y 384 N C Y 385 N C N 386 N O N 387 N O N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N N N 400 S C N 401 N C N 402 N O N 403 N C N 404 N C N 405 N C N 406 N O N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N doub N 338 N sing N 339 N sing N 340 N sing N 341 N sing Y 342 N doub Y 343 N sing Y 344 N sing N 345 N sing Y 346 N doub Y 347 N sing Y 348 N sing N 349 N sing Y 350 N sing Y 351 N doub N 352 N sing Y 353 N doub N 354 N sing Y 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N doub N 366 N sing N 367 N sing N 368 N sing N 369 N sing Y 370 N doub Y 371 N sing Y 372 N sing N 373 N sing Y 374 N doub N 375 N sing Y 376 N doub N 377 N sing Y 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N doub N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing To be Published 0353 Integration of Charge-dipole Interaction and Intramolecular Hydrogen Bond in Ligand Design for the Polo-Box Domain of Polo-like Kinase 1 10.2210/pdb4o56/pdb pdb_00004o56 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2013-07-24 RIGAKU SATURN 944+ GRAPHITE SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 SEALED TUBE RIGAKU MICROMAX-002+ 27924.857 Serine/threonine-protein kinase PLK1 2.7.11.21 UNP RESIDUES 367-603 1 man polymer 898.938 synthetic peptide 1 syn polymer 94.971 PHOSPHATE ION 3 syn non-polymer 18.015 water 254 nat water Polo-like kinase 1, PLK-1, Serine/threonine-protein kinase 13, STPK13 no no LGSPGIQGEVVDCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDS TRLILYNDGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRS AIILHLSNGSVQINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNR LKAS LGSPGIQGEVVDCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDS TRLILYNDGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRS AIILHLSNGSVQINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNR LKAS A polypeptide(L) no yes GPMTS(TPO)PK GPMTSTPK B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample PLK1, PLK 9606 Homo sapiens 562 Escherichia coli BL21(DE3) plasmid pGEX-6p-2 1 2.36 47.81 VAPOR DIFFUSION, HANGING DROP 6.5 2M Ammonium sulfate, 100mM Bis-Tris, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_ref_seq_dif struct_site repository Initial release Data collection Database references Derived calculations Refinement description 1 0 2014-12-24 1 1 2023-11-08 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y PDBJ 2013-12-19 REL REL PO4 PHOSPHATE ION HOH water The peptide was chemically synthesized. sample 1UMW PDB experimental model PO4 1 3 PO4 PO4 701 A PO4 2 3 PO4 PO4 702 A PO4 3 3 PO4 PO4 703 A HOH 1 4 HOH HOH 801 A HOH 4 4 HOH HOH 802 A HOH 5 4 HOH HOH 803 A HOH 6 4 HOH HOH 804 A HOH 7 4 HOH HOH 805 A HOH 8 4 HOH HOH 806 A HOH 9 4 HOH HOH 807 A HOH 10 4 HOH HOH 808 A HOH 11 4 HOH HOH 809 A HOH 12 4 HOH HOH 810 A HOH 13 4 HOH HOH 811 A HOH 14 4 HOH HOH 812 A HOH 15 4 HOH HOH 813 A HOH 16 4 HOH HOH 814 A HOH 17 4 HOH HOH 815 A HOH 18 4 HOH HOH 816 A HOH 19 4 HOH HOH 817 A HOH 20 4 HOH HOH 818 A HOH 21 4 HOH HOH 819 A HOH 22 4 HOH HOH 820 A HOH 23 4 HOH HOH 821 A HOH 24 4 HOH HOH 822 A HOH 25 4 HOH HOH 823 A HOH 26 4 HOH HOH 824 A HOH 27 4 HOH HOH 825 A HOH 29 4 HOH HOH 826 A HOH 30 4 HOH HOH 827 A HOH 32 4 HOH HOH 828 A HOH 33 4 HOH HOH 829 A HOH 34 4 HOH HOH 830 A HOH 35 4 HOH HOH 831 A HOH 36 4 HOH HOH 832 A HOH 38 4 HOH HOH 833 A HOH 39 4 HOH HOH 834 A HOH 40 4 HOH HOH 835 A HOH 41 4 HOH HOH 836 A HOH 42 4 HOH HOH 837 A HOH 43 4 HOH HOH 838 A HOH 44 4 HOH HOH 839 A HOH 45 4 HOH HOH 840 A HOH 46 4 HOH HOH 841 A HOH 47 4 HOH HOH 842 A HOH 48 4 HOH HOH 843 A HOH 49 4 HOH HOH 844 A HOH 50 4 HOH HOH 845 A HOH 51 4 HOH HOH 846 A HOH 52 4 HOH HOH 847 A HOH 53 4 HOH HOH 848 A HOH 54 4 HOH HOH 849 A HOH 55 4 HOH HOH 850 A HOH 56 4 HOH HOH 851 A HOH 57 4 HOH HOH 852 A HOH 58 4 HOH HOH 853 A HOH 59 4 HOH HOH 854 A HOH 60 4 HOH HOH 855 A HOH 61 4 HOH HOH 856 A HOH 62 4 HOH HOH 857 A HOH 63 4 HOH HOH 858 A HOH 64 4 HOH HOH 859 A HOH 65 4 HOH HOH 860 A HOH 66 4 HOH HOH 861 A HOH 67 4 HOH HOH 862 A HOH 68 4 HOH HOH 863 A HOH 69 4 HOH HOH 864 A HOH 70 4 HOH HOH 865 A HOH 71 4 HOH HOH 866 A HOH 72 4 HOH HOH 867 A HOH 73 4 HOH HOH 868 A HOH 74 4 HOH HOH 869 A HOH 75 4 HOH HOH 870 A HOH 76 4 HOH HOH 871 A HOH 77 4 HOH HOH 872 A HOH 78 4 HOH HOH 873 A HOH 79 4 HOH HOH 874 A HOH 80 4 HOH HOH 875 A HOH 81 4 HOH HOH 876 A HOH 82 4 HOH HOH 877 A HOH 83 4 HOH HOH 878 A HOH 84 4 HOH HOH 879 A HOH 85 4 HOH HOH 880 A HOH 87 4 HOH HOH 881 A HOH 88 4 HOH HOH 882 A HOH 89 4 HOH HOH 883 A HOH 90 4 HOH HOH 884 A HOH 91 4 HOH HOH 885 A HOH 92 4 HOH HOH 886 A HOH 93 4 HOH HOH 887 A HOH 94 4 HOH HOH 888 A HOH 95 4 HOH HOH 889 A HOH 96 4 HOH HOH 890 A HOH 98 4 HOH HOH 891 A HOH 99 4 HOH HOH 892 A HOH 100 4 HOH HOH 893 A HOH 101 4 HOH HOH 894 A HOH 102 4 HOH HOH 895 A HOH 103 4 HOH HOH 896 A HOH 104 4 HOH HOH 897 A HOH 106 4 HOH HOH 898 A HOH 107 4 HOH HOH 899 A HOH 108 4 HOH HOH 900 A HOH 109 4 HOH HOH 901 A HOH 110 4 HOH HOH 902 A HOH 111 4 HOH HOH 903 A HOH 112 4 HOH HOH 904 A HOH 113 4 HOH HOH 905 A HOH 114 4 HOH HOH 906 A HOH 115 4 HOH HOH 907 A HOH 116 4 HOH HOH 908 A HOH 117 4 HOH HOH 909 A HOH 118 4 HOH HOH 910 A HOH 119 4 HOH HOH 911 A HOH 120 4 HOH HOH 912 A HOH 121 4 HOH HOH 913 A HOH 122 4 HOH HOH 914 A HOH 123 4 HOH HOH 915 A HOH 124 4 HOH HOH 916 A HOH 125 4 HOH HOH 917 A HOH 126 4 HOH HOH 918 A HOH 127 4 HOH HOH 919 A HOH 128 4 HOH HOH 920 A HOH 129 4 HOH HOH 921 A HOH 130 4 HOH HOH 922 A HOH 131 4 HOH HOH 923 A HOH 132 4 HOH HOH 924 A HOH 133 4 HOH HOH 925 A HOH 134 4 HOH HOH 926 A HOH 135 4 HOH HOH 927 A HOH 136 4 HOH HOH 928 A HOH 137 4 HOH HOH 929 A HOH 138 4 HOH HOH 930 A HOH 139 4 HOH HOH 931 A HOH 140 4 HOH HOH 932 A HOH 141 4 HOH HOH 933 A HOH 142 4 HOH HOH 934 A HOH 143 4 HOH HOH 935 A HOH 144 4 HOH HOH 936 A HOH 145 4 HOH HOH 937 A HOH 146 4 HOH HOH 938 A HOH 147 4 HOH HOH 939 A HOH 148 4 HOH HOH 940 A HOH 149 4 HOH HOH 941 A HOH 150 4 HOH HOH 942 A HOH 151 4 HOH HOH 943 A HOH 152 4 HOH HOH 944 A HOH 153 4 HOH HOH 945 A HOH 154 4 HOH HOH 946 A HOH 155 4 HOH HOH 947 A HOH 156 4 HOH HOH 948 A HOH 157 4 HOH HOH 949 A HOH 158 4 HOH HOH 950 A HOH 159 4 HOH HOH 951 A HOH 160 4 HOH HOH 952 A HOH 161 4 HOH HOH 953 A HOH 162 4 HOH HOH 954 A HOH 163 4 HOH HOH 955 A HOH 164 4 HOH HOH 956 A HOH 165 4 HOH HOH 957 A HOH 166 4 HOH HOH 958 A HOH 167 4 HOH HOH 959 A HOH 168 4 HOH HOH 960 A HOH 169 4 HOH HOH 961 A HOH 170 4 HOH HOH 962 A HOH 171 4 HOH HOH 963 A HOH 172 4 HOH HOH 964 A HOH 173 4 HOH HOH 965 A HOH 174 4 HOH HOH 966 A HOH 175 4 HOH HOH 967 A HOH 177 4 HOH HOH 968 A HOH 178 4 HOH HOH 969 A HOH 179 4 HOH HOH 970 A HOH 180 4 HOH HOH 971 A HOH 181 4 HOH HOH 972 A HOH 182 4 HOH HOH 973 A HOH 183 4 HOH HOH 974 A HOH 184 4 HOH HOH 975 A HOH 185 4 HOH HOH 976 A HOH 186 4 HOH HOH 977 A HOH 187 4 HOH HOH 978 A HOH 188 4 HOH HOH 979 A HOH 189 4 HOH HOH 980 A HOH 190 4 HOH HOH 981 A HOH 191 4 HOH HOH 982 A HOH 192 4 HOH HOH 983 A HOH 193 4 HOH HOH 984 A HOH 194 4 HOH HOH 985 A HOH 195 4 HOH HOH 986 A HOH 196 4 HOH HOH 987 A HOH 197 4 HOH HOH 988 A HOH 198 4 HOH HOH 989 A HOH 199 4 HOH HOH 990 A HOH 200 4 HOH HOH 991 A HOH 201 4 HOH HOH 992 A HOH 202 4 HOH HOH 993 A HOH 203 4 HOH HOH 994 A HOH 204 4 HOH HOH 995 A HOH 205 4 HOH HOH 996 A HOH 206 4 HOH HOH 997 A HOH 207 4 HOH HOH 998 A HOH 208 4 HOH HOH 999 A HOH 209 4 HOH HOH 1000 A HOH 210 4 HOH HOH 1001 A HOH 211 4 HOH HOH 1002 A HOH 212 4 HOH HOH 1003 A HOH 213 4 HOH HOH 1004 A HOH 214 4 HOH HOH 1005 A HOH 215 4 HOH HOH 1006 A HOH 216 4 HOH HOH 1007 A HOH 217 4 HOH HOH 1008 A HOH 218 4 HOH HOH 1009 A HOH 219 4 HOH HOH 1010 A HOH 220 4 HOH HOH 1011 A HOH 221 4 HOH HOH 1012 A HOH 222 4 HOH HOH 1013 A HOH 223 4 HOH HOH 1014 A HOH 224 4 HOH HOH 1015 A HOH 225 4 HOH HOH 1016 A HOH 226 4 HOH HOH 1017 A HOH 227 4 HOH HOH 1018 A HOH 228 4 HOH HOH 1019 A HOH 229 4 HOH HOH 1020 A HOH 230 4 HOH HOH 1021 A HOH 231 4 HOH HOH 1022 A HOH 232 4 HOH HOH 1023 A HOH 233 4 HOH HOH 1024 A HOH 234 4 HOH HOH 1025 A HOH 235 4 HOH HOH 1026 A HOH 236 4 HOH HOH 1027 A HOH 239 4 HOH HOH 1028 A HOH 241 4 HOH HOH 1029 A HOH 242 4 HOH HOH 1030 A HOH 243 4 HOH HOH 1031 A HOH 244 4 HOH HOH 1032 A HOH 245 4 HOH HOH 1033 A HOH 246 4 HOH HOH 1034 A HOH 247 4 HOH HOH 1035 A HOH 249 4 HOH HOH 1036 A HOH 250 4 HOH HOH 1037 A HOH 251 4 HOH HOH 1038 A HOH 252 4 HOH HOH 1039 A HOH 253 4 HOH HOH 1040 A HOH 254 4 HOH HOH 1041 A HOH 86 4 HOH HOH 1042 A HOH 2 4 HOH HOH 101 B HOH 3 4 HOH HOH 102 B HOH 28 4 HOH HOH 103 B HOH 31 4 HOH HOH 104 B HOH 37 4 HOH HOH 105 B HOH 97 4 HOH HOH 106 B HOH 105 4 HOH HOH 107 B HOH 176 4 HOH HOH 108 B HOH 237 4 HOH HOH 109 B HOH 238 4 HOH HOH 110 B HOH 240 4 HOH HOH 111 B HOH 248 4 HOH HOH 112 B LEU 360 n 1 LEU 360 A GLY 361 n 2 GLY 361 A SER 362 n 3 SER 362 A PRO 363 n 4 PRO 363 A GLY 364 n 5 GLY 364 A ILE 365 n 6 ILE 365 A GLN 366 n 7 GLN 366 A GLY 367 n 8 GLY 367 A GLU 368 n 9 GLU 368 A VAL 369 n 10 VAL 369 A VAL 370 n 11 VAL 370 A ASP 371 n 12 ASP 371 A CYS 372 n 13 CYS 372 A HIS 373 n 14 HIS 373 A LEU 374 n 15 LEU 374 A SER 375 n 16 SER 375 A ASP 376 n 17 ASP 376 A MET 377 n 18 MET 377 A LEU 378 n 19 LEU 378 A GLN 379 n 20 GLN 379 A GLN 380 n 21 GLN 380 A LEU 381 n 22 LEU 381 A HIS 382 n 23 HIS 382 A SER 383 n 24 SER 383 A VAL 384 n 25 VAL 384 A ASN 385 n 26 ASN 385 A ALA 386 n 27 ALA 386 A SER 387 n 28 SER 387 A LYS 388 n 29 LYS 388 A PRO 389 n 30 PRO 389 A SER 390 n 31 SER 390 A GLU 391 n 32 GLU 391 A ARG 392 n 33 ARG 392 A GLY 393 n 34 GLY 393 A LEU 394 n 35 LEU 394 A VAL 395 n 36 VAL 395 A ARG 396 n 37 ARG 396 A GLN 397 n 38 GLN 397 A GLU 398 n 39 GLU 398 A GLU 399 n 40 GLU 399 A ALA 400 n 41 ALA 400 A GLU 401 n 42 GLU 401 A ASP 402 n 43 ASP 402 A PRO 403 n 44 PRO 403 A ALA 404 n 45 ALA 404 A CYS 405 n 46 CYS 405 A ILE 406 n 47 ILE 406 A PRO 407 n 48 PRO 407 A ILE 408 n 49 ILE 408 A PHE 409 n 50 PHE 409 A TRP 410 n 51 TRP 410 A VAL 411 n 52 VAL 411 A SER 412 n 53 SER 412 A LYS 413 n 54 LYS 413 A TRP 414 n 55 TRP 414 A VAL 415 n 56 VAL 415 A ASP 416 n 57 ASP 416 A TYR 417 n 58 TYR 417 A SER 418 n 59 SER 418 A ASP 419 n 60 ASP 419 A LYS 420 n 61 LYS 420 A TYR 421 n 62 TYR 421 A GLY 422 n 63 GLY 422 A LEU 423 n 64 LEU 423 A GLY 424 n 65 GLY 424 A TYR 425 n 66 TYR 425 A GLN 426 n 67 GLN 426 A LEU 427 n 68 LEU 427 A CYS 428 n 69 CYS 428 A ASP 429 n 70 ASP 429 A ASN 430 n 71 ASN 430 A SER 431 n 72 SER 431 A VAL 432 n 73 VAL 432 A GLY 433 n 74 GLY 433 A VAL 434 n 75 VAL 434 A LEU 435 n 76 LEU 435 A PHE 436 n 77 PHE 436 A ASN 437 n 78 ASN 437 A ASP 438 n 79 ASP 438 A SER 439 n 80 SER 439 A THR 440 n 81 THR 440 A ARG 441 n 82 ARG 441 A LEU 442 n 83 LEU 442 A ILE 443 n 84 ILE 443 A LEU 444 n 85 LEU 444 A TYR 445 n 86 TYR 445 A ASN 446 n 87 ASN 446 A ASP 447 n 88 ASP 447 A GLY 448 n 89 GLY 448 A ASP 449 n 90 ASP 449 A SER 450 n 91 SER 450 A LEU 451 n 92 LEU 451 A GLN 452 n 93 GLN 452 A TYR 453 n 94 TYR 453 A ILE 454 n 95 ILE 454 A GLU 455 n 96 GLU 455 A ARG 456 n 97 ARG 456 A ASP 457 n 98 ASP 457 A GLY 458 n 99 GLY 458 A THR 459 n 100 THR 459 A GLU 460 n 101 GLU 460 A SER 461 n 102 SER 461 A TYR 462 n 103 TYR 462 A LEU 463 n 104 LEU 463 A THR 464 n 105 THR 464 A VAL 465 n 106 VAL 465 A SER 466 n 107 SER 466 A SER 467 n 108 SER 467 A HIS 468 n 109 HIS 468 A PRO 469 n 110 PRO 469 A ASN 470 n 111 ASN 470 A SER 471 n 112 SER 471 A LEU 472 n 113 LEU 472 A MET 473 n 114 MET 473 A LYS 474 n 115 LYS 474 A LYS 475 n 116 LYS 475 A ILE 476 n 117 ILE 476 A THR 477 n 118 THR 477 A LEU 478 n 119 LEU 478 A LEU 479 n 120 LEU 479 A LYS 480 n 121 LYS 480 A TYR 481 n 122 TYR 481 A PHE 482 n 123 PHE 482 A ARG 483 n 124 ARG 483 A ASN 484 n 125 ASN 484 A TYR 485 n 126 TYR 485 A MET 486 n 127 MET 486 A SER 487 n 128 SER 487 A GLU 488 n 129 GLU 488 A HIS 489 n 130 HIS 489 A LEU 490 n 131 LEU 490 A LEU 491 n 132 LEU 491 A LYS 492 n 133 LYS 492 A ALA 493 n 134 ALA 493 A GLY 494 n 135 GLY 494 A ALA 495 n 136 ALA 495 A ASN 496 n 137 ASN 496 A ILE 497 n 138 ILE 497 A THR 498 n 139 THR 498 A PRO 499 n 140 PRO 499 A ARG 500 n 141 ARG 500 A GLU 501 n 142 GLU 501 A GLY 502 n 143 GLY 502 A ASP 503 n 144 ASP 503 A GLU 504 n 145 GLU 504 A LEU 505 n 146 LEU 505 A ALA 506 n 147 ALA 506 A ARG 507 n 148 ARG 507 A LEU 508 n 149 LEU 508 A PRO 509 n 150 PRO 509 A TYR 510 n 151 TYR 510 A LEU 511 n 152 LEU 511 A ARG 512 n 153 ARG 512 A THR 513 n 154 THR 513 A TRP 514 n 155 TRP 514 A PHE 515 n 156 PHE 515 A ARG 516 n 157 ARG 516 A THR 517 n 158 THR 517 A ARG 518 n 159 ARG 518 A SER 519 n 160 SER 519 A ALA 520 n 161 ALA 520 A ILE 521 n 162 ILE 521 A ILE 522 n 163 ILE 522 A LEU 523 n 164 LEU 523 A HIS 524 n 165 HIS 524 A LEU 525 n 166 LEU 525 A SER 526 n 167 SER 526 A ASN 527 n 168 ASN 527 A GLY 528 n 169 GLY 528 A SER 529 n 170 SER 529 A VAL 530 n 171 VAL 530 A GLN 531 n 172 GLN 531 A ILE 532 n 173 ILE 532 A ASN 533 n 174 ASN 533 A PHE 534 n 175 PHE 534 A PHE 535 n 176 PHE 535 A GLN 536 n 177 GLN 536 A ASP 537 n 178 ASP 537 A HIS 538 n 179 HIS 538 A THR 539 n 180 THR 539 A LYS 540 n 181 LYS 540 A LEU 541 n 182 LEU 541 A ILE 542 n 183 ILE 542 A LEU 543 n 184 LEU 543 A CYS 544 n 185 CYS 544 A PRO 545 n 186 PRO 545 A LEU 546 n 187 LEU 546 A MET 547 n 188 MET 547 A ALA 548 n 189 ALA 548 A ALA 549 n 190 ALA 549 A VAL 550 n 191 VAL 550 A THR 551 n 192 THR 551 A TYR 552 n 193 TYR 552 A ILE 553 n 194 ILE 553 A ASP 554 n 195 ASP 554 A GLU 555 n 196 GLU 555 A LYS 556 n 197 LYS 556 A ARG 557 n 198 ARG 557 A ASP 558 n 199 ASP 558 A PHE 559 n 200 PHE 559 A ARG 560 n 201 ARG 560 A THR 561 n 202 THR 561 A TYR 562 n 203 TYR 562 A ARG 563 n 204 ARG 563 A LEU 564 n 205 LEU 564 A SER 565 n 206 SER 565 A LEU 566 n 207 LEU 566 A LEU 567 n 208 LEU 567 A GLU 568 n 209 GLU 568 A GLU 569 n 210 GLU 569 A TYR 570 n 211 TYR 570 A GLY 571 n 212 GLY 571 A CYS 572 n 213 CYS 572 A CYS 573 n 214 CYS 573 A LYS 574 n 215 LYS 574 A GLU 575 n 216 GLU 575 A LEU 576 n 217 LEU 576 A ALA 577 n 218 ALA 577 A SER 578 n 219 SER 578 A ARG 579 n 220 ARG 579 A LEU 580 n 221 LEU 580 A ARG 581 n 222 ARG 581 A TYR 582 n 223 TYR 582 A ALA 583 n 224 ALA 583 A ARG 584 n 225 ARG 584 A THR 585 n 226 THR 585 A MET 586 n 227 MET 586 A VAL 587 n 228 VAL 587 A ASP 588 n 229 ASP 588 A LYS 589 n 230 LYS 589 A LEU 590 n 231 LEU 590 A LEU 591 n 232 LEU 591 A SER 592 n 233 SER 592 A SER 593 n 234 SER 593 A ARG 594 n 235 ARG 594 A SER 595 n 236 SER 595 A ALA 596 n 237 ALA 596 A SER 597 n 238 SER 597 A ASN 598 n 239 ASN 598 A ARG 599 n 240 ARG 599 A LEU 600 n 241 LEU 600 A LYS 601 n 242 LYS 601 A ALA 602 n 243 ALA 602 A SER 603 n 244 SER 603 A GLY 12 n 1 GLY 12 B PRO 13 n 2 PRO 13 B MET 14 n 3 MET 14 B THR 15 n 4 THR 15 B SER 16 n 5 SER 16 B TPO 17 n 6 TPO 17 B PRO 18 n 7 PRO 18 B LYS 19 n 8 LYS 19 B 0.8463 0.0952 -0.1531 0.9580 -0.4995 1.8083 0.0103 0.0338 0.0261 -0.0009 0.0010 -0.0168 -0.0520 0.0618 -0.0113 0.0048 -0.0001 -0.0071 0.0574 -0.0151 0.0253 refined -2.2738 -10.8246 -6.9916 X-RAY DIFFRACTION 5.6034 -2.5813 -2.5948 9.6919 7.1926 9.2865 -0.1040 0.0656 -0.1976 0.2493 0.1471 0.2824 0.4297 -0.2003 -0.0431 0.0220 -0.0197 -0.0080 0.0673 0.0177 0.0306 refined -14.9633 -21.1574 -8.1486 X-RAY DIFFRACTION A 360 A 603 X-RAY DIFFRACTION 1 B 12 B 19 X-RAY DIFFRACTION 2 author_and_software_defined_assembly PISA 2 dimeric 1510 -24 13310 B TPO 17 PHOSPHOTHREONINE B TPO 6 THR 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 415 A N VAL 56 A O GLY 424 A O GLY 65 A N TYR 425 A N TYR 66 A O GLY 433 A O GLY 74 A N VAL 432 A N VAL 73 A O LEU 444 A O LEU 85 A N ARG 441 A N ARG 82 A O ILE 454 A O ILE 95 A N LEU 451 A N LEU 92 A O LEU 463 A O LEU 104 A N PHE 515 A N PHE 156 A O ILE 522 A O ILE 163 A N LEU 523 A N LEU 164 A O GLN 531 A O GLN 172 A N VAL 530 A N VAL 171 A O LEU 543 A O LEU 184 A N CYS 544 A N CYS 185 A O ALA 549 A O ALA 190 A N VAL 550 A N VAL 191 A O TYR 562 A O TYR 203 A N SER 595 A N SER 236 A O LYS 601 A O LYS 242 1 14.19 2.30 111.70 125.89 A A A CD CE NZ LYS LYS LYS 420 420 420 N 1 -14.73 2.30 115.30 100.57 A A A CA CB CG LEU LEU LEU 423 423 423 N 1 11.54 1.70 111.00 122.54 A A A CB CG CD2 LEU LEU LEU 423 423 423 N 1 3.24 0.50 120.30 123.54 A A A NE CZ NH1 ARG ARG ARG 516 516 516 N 1 -4.17 0.50 120.30 116.13 A A A NE CZ NH2 ARG ARG ARG 516 516 516 N 1 3.30 0.50 120.30 123.60 A A A NE CZ NH1 ARG ARG ARG 557 557 557 N 1 3.10 0.50 120.30 123.40 A A A NE CZ NH1 ARG ARG ARG 581 581 581 N 1 A A CD OE1 GLU GLU 555 555 0.074 0.011 1.252 1.326 N 1 A TYR 417 -102.19 40.41 1 A TYR 421 -131.50 -42.88 1 A ASP 449 -136.72 -32.33 1 A ASN 598 -167.65 98.18 15.933 0.20 0.00 0.19 -0.61 0.00 0.36 0.968 0.940 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.20130 0.13980 0.14292 1.80 24.53 1259 24869 23483 5.1 99.44 4.789 0.068 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.228 0.115 0.80 0.80 1.20 1UMW MAXIMUM LIKELIHOOD MASK 1.80 24.53 254 2287 15 0 2018 0.020 0.019 2070 0.002 0.020 1960 2.194 1.985 2800 1.004 3.000 4511 5.895 5.000 250 27.184 23.085 94 14.925 15.000 368 19.691 15.000 18 0.169 0.200 308 0.009 0.021 2293 0.001 0.020 477 3.758 3.000 4030 17.000 5.000 34 5.892 5.000 4213 0.249 0.168 1.847 97 1707 20 97.88 1.80 24.53 4O56 24869 24743 2 2 1 99.5 0.038 1.80 1.84 4.4 1 99.5 0.038 1.86 1.94 4.7 1 99.7 0.028 3.08 3.87 30.1 1 99.7 0.026 3.87 24.52 36.9 1 99.6 data collection CrystalClear phasing PHASER refinement REFMAC 5.7.0029 data reduction CrystalClear data scaling CrystalClear Structure of PLK1 in complex with peptide 1 N N 2 N N 3 N N 3 N N 3 N N 4 N N 4 N N A GLN 366 A GLN 7 HELX_P A SER 387 A SER 28 1 1 22 A LYS 388 A LYS 29 HELX_P A ARG 392 A ARG 33 5 2 5 A ARG 396 A ARG 37 HELX_P A GLU 401 A GLU 42 5 3 6 A ASP 402 A ASP 43 HELX_P A ILE 406 A ILE 47 5 4 5 A PRO 469 A PRO 110 HELX_P A SER 471 A SER 112 5 5 3 A LEU 472 A LEU 113 HELX_P A LEU 490 A LEU 131 1 6 19 A GLY 502 A GLY 143 HELX_P A ALA 506 A ALA 147 5 7 5 A LEU 564 A LEU 205 HELX_P A GLY 571 A GLY 212 1 8 8 A CYS 573 A CYS 214 HELX_P A SER 592 A SER 233 1 9 20 covale 1.317 both B SER 16 B C SER 5 1_555 B TPO 17 B N TPO 6 1_555 covale 1.318 both B TPO 17 B C TPO 6 1_555 B PRO 18 B N PRO 7 1_555 TRANSFERASE/PEPTIDE PLK1 Polo Box Domain, Polo box domain, Kinase domain, TRANSFERASE-PEPTIDE complex PLK1_HUMAN UNP 1 367 P53350 GEVVDCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYN DGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLS NGSVQINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS 4O56 PDB 2 4O56 367 603 4O56 367 603 P53350 A 1 8 244 12 19 4O56 12 19 4O56 B 2 1 8 1 expression tag LEU 360 4O56 A P53350 UNP 1 1 expression tag GLY 361 4O56 A P53350 UNP 2 1 expression tag SER 362 4O56 A P53350 UNP 3 1 expression tag PRO 363 4O56 A P53350 UNP 4 1 expression tag GLY 364 4O56 A P53350 UNP 5 1 expression tag ILE 365 4O56 A P53350 UNP 6 1 expression tag GLN 366 4O56 A P53350 UNP 7 6 6 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 411 A VAL 52 A TYR 417 A TYR 58 A GLY 422 A GLY 63 A LEU 427 A LEU 68 A VAL 432 A VAL 73 A PHE 436 A PHE 77 A ARG 441 A ARG 82 A LEU 444 A LEU 85 A SER 450 A SER 91 A ILE 454 A ILE 95 A GLU 460 A GLU 101 A THR 464 A THR 105 A LEU 511 A LEU 152 A ARG 516 A ARG 157 A ALA 520 A ALA 161 A LEU 525 A LEU 166 A VAL 530 A VAL 171 A PHE 534 A PHE 175 A LYS 540 A LYS 181 A CYS 544 A CYS 185 A ALA 549 A ALA 190 A ILE 553 A ILE 194 A PHE 559 A PHE 200 A ARG 563 A ARG 204 A ARG 594 A ARG 235 A SER 595 A SER 236 A ASN 598 A ASN 239 A ALA 602 A ALA 243 BINDING SITE FOR RESIDUE PO4 A 701 A PO4 701 Software 6 BINDING SITE FOR RESIDUE PO4 A 702 A PO4 702 Software 5 BINDING SITE FOR RESIDUE PO4 A 703 A PO4 703 Software 3 A THR 517 A THR 158 6 1_555 A ARG 518 A ARG 159 6 1_555 A SER 519 A SER 160 6 1_555 A TYR 582 A TYR 223 6 1_555 A HOH 831 F HOH 6 1_455 A HOH 901 F HOH 6 1_555 A ARG 518 A ARG 159 5 1_655 A ALA 548 A ALA 189 5 1_555 A ARG 563 A ARG 204 5 1_555 A SER 565 A SER 206 5 1_555 A HOH 832 F HOH 5 1_555 A ARG 392 A ARG 33 3 1_555 A GLY 393 A GLY 34 3 1_555 A HOH 836 F HOH 3 1_555 4 P 1 21 1