0.016155
0.000000
0.000000
0.000000
0.014767
0.000000
0.000000
0.000000
0.008647
0.00000
0.00000
0.00000
Lebrette, H.
Cavazza, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
61.900
67.720
115.650
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C8 H18 N2 O4 S
238.305
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HEPES
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Ni 2
58.693
NICKEL (II) ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
N
C
N
90
N
C
N
91
N
N
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
C
N
98
N
C
N
99
N
S
N
100
N
O
N
101
N
O
N
102
N
O
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
N
N
122
S
C
N
123
N
C
N
124
N
O
N
125
N
C
N
126
N
C
N
127
N
C
N
128
N
O
N
129
N
N
N
130
N
O
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
N
N
142
S
C
N
143
N
C
N
144
N
O
N
145
N
C
N
146
N
C
N
147
N
C
N
148
N
O
N
149
N
O
N
150
N
O
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
N
C
N
162
N
C
N
163
N
O
N
164
N
O
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
C
N
171
N
O
N
172
N
C
N
173
N
O
N
174
N
C
N
175
N
O
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
Y
189
N
C
Y
190
N
N
Y
191
N
C
Y
192
N
C
Y
193
N
N
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
N
N
209
S
C
N
210
N
C
N
211
N
O
N
212
S
C
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
O
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
N
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
N
282
N
C
N
283
N
S
N
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
NI
N
298
N
N
N
299
S
C
N
300
N
C
N
301
N
O
N
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
N
309
N
O
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
N
326
N
C
N
327
N
C
N
328
N
O
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
N
N
339
S
C
N
340
N
C
N
341
N
O
N
342
N
C
N
343
N
O
N
344
N
O
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
N
N
353
S
C
N
354
N
C
N
355
N
O
N
356
R
C
N
357
N
O
N
358
N
C
N
359
N
O
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
N
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
N
383
N
O
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
N
N
397
S
C
N
398
N
C
N
399
N
O
N
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
N
407
N
O
N
408
N
O
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
N
N
421
S
C
N
422
N
C
N
423
N
O
N
424
N
C
N
425
N
C
N
426
N
C
N
427
N
O
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
doub
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
Y
186
N
sing
Y
187
N
doub
Y
188
N
doub
N
189
N
sing
Y
190
N
sing
N
191
N
sing
Y
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
doub
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
Y
294
N
doub
Y
295
N
sing
Y
296
N
sing
N
297
N
sing
Y
298
N
doub
N
299
N
sing
Y
300
N
doub
N
301
N
sing
Y
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
doub
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
Y
363
N
doub
Y
364
N
sing
Y
365
N
sing
N
366
N
sing
Y
367
N
doub
Y
368
N
sing
Y
369
N
sing
N
370
N
sing
Y
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
Y
391
N
doub
Y
392
N
sing
Y
393
N
sing
N
394
N
sing
Y
395
N
doub
N
396
N
sing
Y
397
N
doub
N
398
N
sing
Y
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
doub
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
UK
Metallomics
1756-5901
7
613
621
10.1039/c4mt00295d
25611161
Novel insights into nickel import in Staphylococcus aureus: the positive role of free histidine and structural characterization of a new thiazolidine-type nickel chelator.
2015
10.2210/pdb4ofj/pdb
pdb_00004ofj
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
PIXEL
2012-11-08
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.98400
1.0
ID29
ESRF
0.98400
SYNCHROTRON
ESRF BEAMLINE ID29
53545.285
Extracytoplasmic Nickel-Binding Protein SaNikA
1
man
polymer
58.693
NICKEL (II) ION
1
syn
non-polymer
156.162
HISTIDINE
2
syn
non-polymer
238.305
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
1
syn
non-polymer
92.094
GLYCEROL
17
syn
non-polymer
18.015
water
415
nat
water
SaNikA
no
no
CGSMHSSGKDLNISLPLKTKSIAPYETDVPVKIGAAESLFKTNDQGKIEKALVKSYHQPNDTTLDIELKDNIKFQNGQKL
TAEKVKSSLENSMKKSDLVKYSLPISSITAKGQKLTIKTNSAYPELVSELANPFMAIYDTDAKSDVNQTPVGTGPYQIKD
YKQSRKISLSNFKDYWQGKPKLDHITVTYQEDGNNRVRNLESQKDDLITDVPVNKVQDIENNQNLKVSKESGFRTSLLMY
NHTNKKMTKSVREALDHIIDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQAKMLLAKDGYTKEHPLKIKLI
TYDGRPELSKIAQVLQSDAKKANIEIDIKSVDDIEGYLKDRSAWDATMYSFGTIPRGDTGYFFNQAYKKDGAINKGDYNN
SNVDDLINQLNHTVDVKERHNISNDIIKLSSRDVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIDYRTTIER
CGSMHSSGKDLNISLPLKTKSIAPYETDVPVKIGAAESLFKTNDQGKIEKALVKSYHQPNDTTLDIELKDNIKFQNGQKL
TAEKVKSSLENSMKKSDLVKYSLPISSITAKGQKLTIKTNSAYPELVSELANPFMAIYDTDAKSDVNQTPVGTGPYQIKD
YKQSRKISLSNFKDYWQGKPKLDHITVTYQEDGNNRVRNLESQKDDLITDVPVNKVQDIENNQNLKVSKESGFRTSLLMY
NHTNKKMTKSVREALDHIIDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQAKMLLAKDGYTKEHPLKIKLI
TYDGRPELSKIAQVLQSDAKKANIEIDIKSVDDIEGYLKDRSAWDATMYSFGTIPRGDTGYFFNQAYKKDGAINKGDYNN
SNVDDLINQLNHTVDVKERHNISNDIIKLSSRDVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIDYRTTIER
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
subsp. aureus COL
sample
SACOL0217
93062
Staphylococcus aureus
562
Escherichia coli
1
2.26
45.66
VAPOR DIFFUSION, HANGING DROP
7.0
27 % PEG 3350, 0.1 M HEPES pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2015-02-04
1
1
2015-04-22
1
2
2023-09-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2014-01-14
REL
REL
NI
NICKEL (II) ION
HIS
HISTIDINE
EPE
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
GOL
GLYCEROL
HOH
water
3RQT
PDB ENTRY 3RQT
PDB
experimental model
NI
1
2
NI
NI
501
A
HIS
1
3
HIS
HIS
502
A
HIS
1
3
HIS
HIS
503
A
EPE
1
4
EPE
EPE
504
A
GOL
1
5
GOL
GOL
505
A
GOL
1
5
GOL
GOL
506
A
GOL
1
5
GOL
GOL
507
A
GOL
1
5
GOL
GOL
508
A
GOL
1
5
GOL
GOL
509
A
GOL
2
5
GOL
GOL
510
A
GOL
3
5
GOL
GOL
511
A
GOL
4
5
GOL
GOL
512
A
GOL
6
5
GOL
GOL
513
A
GOL
7
5
GOL
GOL
514
A
GOL
10
5
GOL
GOL
515
A
GOL
11
5
GOL
GOL
516
A
GOL
15
5
GOL
GOL
517
A
GOL
17
5
GOL
GOL
518
A
GOL
18
5
GOL
GOL
519
A
GOL
24
5
GOL
GOL
520
A
GOL
25
5
GOL
GOL
521
A
HOH
1
6
HOH
HOH
601
A
HOH
2
6
HOH
HOH
602
A
HOH
3
6
HOH
HOH
603
A
HOH
4
6
HOH
HOH
604
A
HOH
5
6
HOH
HOH
605
A
HOH
6
6
HOH
HOH
606
A
HOH
7
6
HOH
HOH
607
A
HOH
8
6
HOH
HOH
608
A
HOH
9
6
HOH
HOH
609
A
HOH
10
6
HOH
HOH
610
A
HOH
11
6
HOH
HOH
611
A
HOH
12
6
HOH
HOH
612
A
HOH
13
6
HOH
HOH
613
A
HOH
14
6
HOH
HOH
614
A
HOH
15
6
HOH
HOH
615
A
HOH
16
6
HOH
HOH
616
A
HOH
17
6
HOH
HOH
617
A
HOH
18
6
HOH
HOH
618
A
HOH
19
6
HOH
HOH
619
A
HOH
20
6
HOH
HOH
620
A
HOH
21
6
HOH
HOH
621
A
HOH
22
6
HOH
HOH
622
A
HOH
23
6
HOH
HOH
623
A
HOH
24
6
HOH
HOH
624
A
HOH
25
6
HOH
HOH
625
A
HOH
26
6
HOH
HOH
626
A
HOH
27
6
HOH
HOH
627
A
HOH
28
6
HOH
HOH
628
A
HOH
29
6
HOH
HOH
629
A
HOH
30
6
HOH
HOH
630
A
HOH
31
6
HOH
HOH
631
A
HOH
32
6
HOH
HOH
632
A
HOH
33
6
HOH
HOH
633
A
HOH
34
6
HOH
HOH
634
A
HOH
35
6
HOH
HOH
635
A
HOH
36
6
HOH
HOH
636
A
HOH
37
6
HOH
HOH
637
A
HOH
38
6
HOH
HOH
638
A
HOH
39
6
HOH
HOH
639
A
HOH
40
6
HOH
HOH
640
A
HOH
41
6
HOH
HOH
641
A
HOH
42
6
HOH
HOH
642
A
HOH
43
6
HOH
HOH
643
A
HOH
44
6
HOH
HOH
644
A
HOH
45
6
HOH
HOH
645
A
HOH
46
6
HOH
HOH
646
A
HOH
47
6
HOH
HOH
647
A
HOH
48
6
HOH
HOH
648
A
HOH
49
6
HOH
HOH
649
A
HOH
50
6
HOH
HOH
650
A
HOH
51
6
HOH
HOH
651
A
HOH
52
6
HOH
HOH
652
A
HOH
53
6
HOH
HOH
653
A
HOH
54
6
HOH
HOH
654
A
HOH
55
6
HOH
HOH
655
A
HOH
56
6
HOH
HOH
656
A
HOH
57
6
HOH
HOH
657
A
HOH
58
6
HOH
HOH
658
A
HOH
59
6
HOH
HOH
659
A
HOH
60
6
HOH
HOH
660
A
HOH
61
6
HOH
HOH
661
A
HOH
62
6
HOH
HOH
662
A
HOH
63
6
HOH
HOH
663
A
HOH
64
6
HOH
HOH
664
A
HOH
65
6
HOH
HOH
665
A
HOH
66
6
HOH
HOH
666
A
HOH
67
6
HOH
HOH
667
A
HOH
68
6
HOH
HOH
668
A
HOH
69
6
HOH
HOH
669
A
HOH
70
6
HOH
HOH
670
A
HOH
71
6
HOH
HOH
671
A
HOH
72
6
HOH
HOH
672
A
HOH
73
6
HOH
HOH
673
A
HOH
74
6
HOH
HOH
674
A
HOH
75
6
HOH
HOH
675
A
HOH
76
6
HOH
HOH
676
A
HOH
77
6
HOH
HOH
677
A
HOH
78
6
HOH
HOH
678
A
HOH
79
6
HOH
HOH
679
A
HOH
80
6
HOH
HOH
680
A
HOH
81
6
HOH
HOH
681
A
HOH
82
6
HOH
HOH
682
A
HOH
83
6
HOH
HOH
683
A
HOH
84
6
HOH
HOH
684
A
HOH
85
6
HOH
HOH
685
A
HOH
86
6
HOH
HOH
686
A
HOH
87
6
HOH
HOH
687
A
HOH
88
6
HOH
HOH
688
A
HOH
89
6
HOH
HOH
689
A
HOH
90
6
HOH
HOH
690
A
HOH
91
6
HOH
HOH
691
A
HOH
92
6
HOH
HOH
692
A
HOH
93
6
HOH
HOH
693
A
HOH
94
6
HOH
HOH
694
A
HOH
95
6
HOH
HOH
695
A
HOH
96
6
HOH
HOH
696
A
HOH
97
6
HOH
HOH
697
A
HOH
98
6
HOH
HOH
698
A
HOH
99
6
HOH
HOH
699
A
HOH
100
6
HOH
HOH
700
A
HOH
101
6
HOH
HOH
701
A
HOH
102
6
HOH
HOH
702
A
HOH
103
6
HOH
HOH
703
A
HOH
104
6
HOH
HOH
704
A
HOH
105
6
HOH
HOH
705
A
HOH
106
6
HOH
HOH
706
A
HOH
107
6
HOH
HOH
707
A
HOH
108
6
HOH
HOH
708
A
HOH
109
6
HOH
HOH
709
A
HOH
110
6
HOH
HOH
710
A
HOH
111
6
HOH
HOH
711
A
HOH
112
6
HOH
HOH
712
A
HOH
113
6
HOH
HOH
713
A
HOH
114
6
HOH
HOH
714
A
HOH
115
6
HOH
HOH
715
A
HOH
116
6
HOH
HOH
716
A
HOH
117
6
HOH
HOH
717
A
HOH
118
6
HOH
HOH
718
A
HOH
119
6
HOH
HOH
719
A
HOH
120
6
HOH
HOH
720
A
HOH
121
6
HOH
HOH
721
A
HOH
122
6
HOH
HOH
722
A
HOH
123
6
HOH
HOH
723
A
HOH
124
6
HOH
HOH
724
A
HOH
125
6
HOH
HOH
725
A
HOH
126
6
HOH
HOH
726
A
HOH
127
6
HOH
HOH
727
A
HOH
128
6
HOH
HOH
728
A
HOH
129
6
HOH
HOH
729
A
HOH
130
6
HOH
HOH
730
A
HOH
131
6
HOH
HOH
731
A
HOH
132
6
HOH
HOH
732
A
HOH
133
6
HOH
HOH
733
A
HOH
134
6
HOH
HOH
734
A
HOH
135
6
HOH
HOH
735
A
HOH
136
6
HOH
HOH
736
A
HOH
137
6
HOH
HOH
737
A
HOH
138
6
HOH
HOH
738
A
HOH
139
6
HOH
HOH
739
A
HOH
140
6
HOH
HOH
740
A
HOH
141
6
HOH
HOH
741
A
HOH
142
6
HOH
HOH
742
A
HOH
143
6
HOH
HOH
743
A
HOH
144
6
HOH
HOH
744
A
HOH
145
6
HOH
HOH
745
A
HOH
146
6
HOH
HOH
746
A
HOH
147
6
HOH
HOH
747
A
HOH
148
6
HOH
HOH
748
A
HOH
149
6
HOH
HOH
749
A
HOH
150
6
HOH
HOH
750
A
HOH
151
6
HOH
HOH
751
A
HOH
152
6
HOH
HOH
752
A
HOH
153
6
HOH
HOH
753
A
HOH
154
6
HOH
HOH
754
A
HOH
155
6
HOH
HOH
755
A
HOH
156
6
HOH
HOH
756
A
HOH
157
6
HOH
HOH
757
A
HOH
158
6
HOH
HOH
758
A
HOH
159
6
HOH
HOH
759
A
HOH
160
6
HOH
HOH
760
A
HOH
161
6
HOH
HOH
761
A
HOH
162
6
HOH
HOH
762
A
HOH
163
6
HOH
HOH
763
A
HOH
164
6
HOH
HOH
764
A
HOH
165
6
HOH
HOH
765
A
HOH
166
6
HOH
HOH
766
A
HOH
167
6
HOH
HOH
767
A
HOH
168
6
HOH
HOH
768
A
HOH
169
6
HOH
HOH
769
A
HOH
170
6
HOH
HOH
770
A
HOH
171
6
HOH
HOH
771
A
HOH
173
6
HOH
HOH
772
A
HOH
174
6
HOH
HOH
773
A
HOH
175
6
HOH
HOH
774
A
HOH
176
6
HOH
HOH
775
A
HOH
177
6
HOH
HOH
776
A
HOH
178
6
HOH
HOH
777
A
HOH
179
6
HOH
HOH
778
A
HOH
180
6
HOH
HOH
779
A
HOH
181
6
HOH
HOH
780
A
HOH
182
6
HOH
HOH
781
A
HOH
183
6
HOH
HOH
782
A
HOH
184
6
HOH
HOH
783
A
HOH
185
6
HOH
HOH
784
A
HOH
186
6
HOH
HOH
785
A
HOH
187
6
HOH
HOH
786
A
HOH
188
6
HOH
HOH
787
A
HOH
190
6
HOH
HOH
788
A
HOH
191
6
HOH
HOH
789
A
HOH
192
6
HOH
HOH
790
A
HOH
193
6
HOH
HOH
791
A
HOH
194
6
HOH
HOH
792
A
HOH
195
6
HOH
HOH
793
A
HOH
196
6
HOH
HOH
794
A
HOH
197
6
HOH
HOH
795
A
HOH
198
6
HOH
HOH
796
A
HOH
199
6
HOH
HOH
797
A
HOH
200
6
HOH
HOH
798
A
HOH
201
6
HOH
HOH
799
A
HOH
203
6
HOH
HOH
800
A
HOH
204
6
HOH
HOH
801
A
HOH
205
6
HOH
HOH
802
A
HOH
206
6
HOH
HOH
803
A
HOH
208
6
HOH
HOH
804
A
HOH
209
6
HOH
HOH
805
A
HOH
210
6
HOH
HOH
806
A
HOH
211
6
HOH
HOH
807
A
HOH
212
6
HOH
HOH
808
A
HOH
213
6
HOH
HOH
809
A
HOH
214
6
HOH
HOH
810
A
HOH
215
6
HOH
HOH
811
A
HOH
216
6
HOH
HOH
812
A
HOH
217
6
HOH
HOH
813
A
HOH
218
6
HOH
HOH
814
A
HOH
219
6
HOH
HOH
815
A
HOH
220
6
HOH
HOH
816
A
HOH
221
6
HOH
HOH
817
A
HOH
222
6
HOH
HOH
818
A
HOH
223
6
HOH
HOH
819
A
HOH
224
6
HOH
HOH
820
A
HOH
225
6
HOH
HOH
821
A
HOH
226
6
HOH
HOH
822
A
HOH
227
6
HOH
HOH
823
A
HOH
228
6
HOH
HOH
824
A
HOH
230
6
HOH
HOH
825
A
HOH
231
6
HOH
HOH
826
A
HOH
232
6
HOH
HOH
827
A
HOH
233
6
HOH
HOH
828
A
HOH
234
6
HOH
HOH
829
A
HOH
235
6
HOH
HOH
830
A
HOH
236
6
HOH
HOH
831
A
HOH
237
6
HOH
HOH
832
A
HOH
239
6
HOH
HOH
833
A
HOH
240
6
HOH
HOH
834
A
HOH
241
6
HOH
HOH
835
A
HOH
242
6
HOH
HOH
836
A
HOH
243
6
HOH
HOH
837
A
HOH
244
6
HOH
HOH
838
A
HOH
245
6
HOH
HOH
839
A
HOH
246
6
HOH
HOH
840
A
HOH
247
6
HOH
HOH
841
A
HOH
248
6
HOH
HOH
842
A
HOH
249
6
HOH
HOH
843
A
HOH
250
6
HOH
HOH
844
A
HOH
251
6
HOH
HOH
845
A
HOH
252
6
HOH
HOH
846
A
HOH
253
6
HOH
HOH
847
A
HOH
254
6
HOH
HOH
848
A
HOH
255
6
HOH
HOH
849
A
HOH
256
6
HOH
HOH
850
A
HOH
257
6
HOH
HOH
851
A
HOH
259
6
HOH
HOH
852
A
HOH
260
6
HOH
HOH
853
A
HOH
262
6
HOH
HOH
854
A
HOH
263
6
HOH
HOH
855
A
HOH
264
6
HOH
HOH
856
A
HOH
265
6
HOH
HOH
857
A
HOH
266
6
HOH
HOH
858
A
HOH
267
6
HOH
HOH
859
A
HOH
268
6
HOH
HOH
860
A
HOH
269
6
HOH
HOH
861
A
HOH
270
6
HOH
HOH
862
A
HOH
271
6
HOH
HOH
863
A
HOH
272
6
HOH
HOH
864
A
HOH
273
6
HOH
HOH
865
A
HOH
274
6
HOH
HOH
866
A
HOH
275
6
HOH
HOH
867
A
HOH
276
6
HOH
HOH
868
A
HOH
277
6
HOH
HOH
869
A
HOH
278
6
HOH
HOH
870
A
HOH
279
6
HOH
HOH
871
A
HOH
280
6
HOH
HOH
872
A
HOH
281
6
HOH
HOH
873
A
HOH
282
6
HOH
HOH
874
A
HOH
283
6
HOH
HOH
875
A
HOH
284
6
HOH
HOH
876
A
HOH
285
6
HOH
HOH
877
A
HOH
286
6
HOH
HOH
878
A
HOH
287
6
HOH
HOH
879
A
HOH
288
6
HOH
HOH
880
A
HOH
289
6
HOH
HOH
881
A
HOH
291
6
HOH
HOH
882
A
HOH
292
6
HOH
HOH
883
A
HOH
293
6
HOH
HOH
884
A
HOH
294
6
HOH
HOH
885
A
HOH
295
6
HOH
HOH
886
A
HOH
296
6
HOH
HOH
887
A
HOH
297
6
HOH
HOH
888
A
HOH
299
6
HOH
HOH
889
A
HOH
300
6
HOH
HOH
890
A
HOH
301
6
HOH
HOH
891
A
HOH
302
6
HOH
HOH
892
A
HOH
303
6
HOH
HOH
893
A
HOH
304
6
HOH
HOH
894
A
HOH
305
6
HOH
HOH
895
A
HOH
306
6
HOH
HOH
896
A
HOH
308
6
HOH
HOH
897
A
HOH
311
6
HOH
HOH
898
A
HOH
312
6
HOH
HOH
899
A
HOH
314
6
HOH
HOH
900
A
HOH
315
6
HOH
HOH
901
A
HOH
316
6
HOH
HOH
902
A
HOH
317
6
HOH
HOH
903
A
HOH
318
6
HOH
HOH
904
A
HOH
319
6
HOH
HOH
905
A
HOH
320
6
HOH
HOH
906
A
HOH
321
6
HOH
HOH
907
A
HOH
322
6
HOH
HOH
908
A
HOH
323
6
HOH
HOH
909
A
HOH
325
6
HOH
HOH
910
A
HOH
326
6
HOH
HOH
911
A
HOH
327
6
HOH
HOH
912
A
HOH
328
6
HOH
HOH
913
A
HOH
329
6
HOH
HOH
914
A
HOH
330
6
HOH
HOH
915
A
HOH
331
6
HOH
HOH
916
A
HOH
333
6
HOH
HOH
917
A
HOH
334
6
HOH
HOH
918
A
HOH
335
6
HOH
HOH
919
A
HOH
336
6
HOH
HOH
920
A
HOH
337
6
HOH
HOH
921
A
HOH
338
6
HOH
HOH
922
A
HOH
339
6
HOH
HOH
923
A
HOH
341
6
HOH
HOH
924
A
HOH
342
6
HOH
HOH
925
A
HOH
344
6
HOH
HOH
926
A
HOH
345
6
HOH
HOH
927
A
HOH
346
6
HOH
HOH
928
A
HOH
347
6
HOH
HOH
929
A
HOH
348
6
HOH
HOH
930
A
HOH
350
6
HOH
HOH
931
A
HOH
351
6
HOH
HOH
932
A
HOH
354
6
HOH
HOH
933
A
HOH
355
6
HOH
HOH
934
A
HOH
358
6
HOH
HOH
935
A
HOH
360
6
HOH
HOH
936
A
HOH
361
6
HOH
HOH
937
A
HOH
362
6
HOH
HOH
938
A
HOH
363
6
HOH
HOH
939
A
HOH
365
6
HOH
HOH
940
A
HOH
366
6
HOH
HOH
941
A
HOH
367
6
HOH
HOH
942
A
HOH
368
6
HOH
HOH
943
A
HOH
369
6
HOH
HOH
944
A
HOH
371
6
HOH
HOH
945
A
HOH
372
6
HOH
HOH
946
A
HOH
373
6
HOH
HOH
947
A
HOH
374
6
HOH
HOH
948
A
HOH
375
6
HOH
HOH
949
A
HOH
376
6
HOH
HOH
950
A
HOH
377
6
HOH
HOH
951
A
HOH
378
6
HOH
HOH
952
A
HOH
379
6
HOH
HOH
953
A
HOH
380
6
HOH
HOH
954
A
HOH
381
6
HOH
HOH
955
A
HOH
382
6
HOH
HOH
956
A
HOH
383
6
HOH
HOH
957
A
HOH
384
6
HOH
HOH
958
A
HOH
385
6
HOH
HOH
959
A
HOH
387
6
HOH
HOH
960
A
HOH
388
6
HOH
HOH
961
A
HOH
389
6
HOH
HOH
962
A
HOH
390
6
HOH
HOH
963
A
HOH
392
6
HOH
HOH
964
A
HOH
393
6
HOH
HOH
965
A
HOH
394
6
HOH
HOH
966
A
HOH
395
6
HOH
HOH
967
A
HOH
396
6
HOH
HOH
968
A
HOH
397
6
HOH
HOH
969
A
HOH
399
6
HOH
HOH
970
A
HOH
401
6
HOH
HOH
971
A
HOH
403
6
HOH
HOH
972
A
HOH
404
6
HOH
HOH
973
A
HOH
405
6
HOH
HOH
974
A
HOH
406
6
HOH
HOH
975
A
HOH
407
6
HOH
HOH
976
A
HOH
408
6
HOH
HOH
977
A
HOH
409
6
HOH
HOH
978
A
HOH
410
6
HOH
HOH
979
A
HOH
411
6
HOH
HOH
980
A
HOH
412
6
HOH
HOH
981
A
HOH
413
6
HOH
HOH
982
A
HOH
414
6
HOH
HOH
983
A
HOH
415
6
HOH
HOH
984
A
HOH
416
6
HOH
HOH
985
A
HOH
417
6
HOH
HOH
986
A
HOH
418
6
HOH
HOH
987
A
HOH
419
6
HOH
HOH
988
A
HOH
420
6
HOH
HOH
989
A
HOH
421
6
HOH
HOH
990
A
HOH
422
6
HOH
HOH
991
A
HOH
423
6
HOH
HOH
992
A
HOH
424
6
HOH
HOH
993
A
HOH
426
6
HOH
HOH
994
A
HOH
427
6
HOH
HOH
995
A
HOH
428
6
HOH
HOH
996
A
HOH
429
6
HOH
HOH
997
A
HOH
430
6
HOH
HOH
998
A
HOH
431
6
HOH
HOH
999
A
HOH
432
6
HOH
HOH
1000
A
HOH
433
6
HOH
HOH
1001
A
HOH
434
6
HOH
HOH
1002
A
HOH
435
6
HOH
HOH
1003
A
HOH
436
6
HOH
HOH
1004
A
HOH
437
6
HOH
HOH
1005
A
HOH
439
6
HOH
HOH
1006
A
HOH
440
6
HOH
HOH
1007
A
HOH
441
6
HOH
HOH
1008
A
HOH
442
6
HOH
HOH
1009
A
HOH
443
6
HOH
HOH
1010
A
HOH
444
6
HOH
HOH
1011
A
HOH
445
6
HOH
HOH
1012
A
HOH
446
6
HOH
HOH
1013
A
HOH
447
6
HOH
HOH
1014
A
HOH
448
6
HOH
HOH
1015
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
GLY
8
n
8
GLY
8
A
LYS
9
n
9
LYS
9
A
ASP
10
n
10
ASP
10
A
LEU
11
n
11
LEU
11
A
ASN
12
n
12
ASN
12
A
ILE
13
n
13
ILE
13
A
SER
14
n
14
SER
14
A
LEU
15
n
15
LEU
15
A
PRO
16
n
16
PRO
16
A
LEU
17
n
17
LEU
17
A
LYS
18
n
18
LYS
18
A
THR
19
n
19
THR
19
A
LYS
20
n
20
LYS
20
A
SER
21
n
21
SER
21
A
ILE
22
n
22
ILE
22
A
ALA
23
n
23
ALA
23
A
PRO
24
n
24
PRO
24
A
TYR
25
n
25
TYR
25
A
GLU
26
n
26
GLU
26
A
THR
27
n
27
THR
27
A
ASP
28
n
28
ASP
28
A
VAL
29
n
29
VAL
29
A
PRO
30
n
30
PRO
30
A
VAL
31
n
31
VAL
31
A
LYS
32
n
32
LYS
32
A
ILE
33
n
33
ILE
33
A
GLY
34
n
34
GLY
34
A
ALA
35
n
35
ALA
35
A
ALA
36
n
36
ALA
36
A
GLU
37
n
37
GLU
37
A
SER
38
n
38
SER
38
A
LEU
39
n
39
LEU
39
A
PHE
40
n
40
PHE
40
A
LYS
41
n
41
LYS
41
A
THR
42
n
42
THR
42
A
ASN
43
n
43
ASN
43
A
ASP
44
n
44
ASP
44
A
GLN
45
n
45
GLN
45
A
GLY
46
n
46
GLY
46
A
LYS
47
n
47
LYS
47
A
ILE
48
n
48
ILE
48
A
GLU
49
n
49
GLU
49
A
LYS
50
n
50
LYS
50
A
ALA
51
n
51
ALA
51
A
LEU
52
n
52
LEU
52
A
VAL
53
n
53
VAL
53
A
LYS
54
n
54
LYS
54
A
SER
55
n
55
SER
55
A
TYR
56
n
56
TYR
56
A
HIS
57
n
57
HIS
57
A
GLN
58
n
58
GLN
58
A
PRO
59
n
59
PRO
59
A
ASN
60
n
60
ASN
60
A
ASP
61
n
61
ASP
61
A
THR
62
n
62
THR
62
A
THR
63
n
63
THR
63
A
LEU
64
n
64
LEU
64
A
ASP
65
n
65
ASP
65
A
ILE
66
n
66
ILE
66
A
GLU
67
n
67
GLU
67
A
LEU
68
n
68
LEU
68
A
LYS
69
n
69
LYS
69
A
ASP
70
n
70
ASP
70
A
ASN
71
n
71
ASN
71
A
ILE
72
n
72
ILE
72
A
LYS
73
n
73
LYS
73
A
PHE
74
n
74
PHE
74
A
GLN
75
n
75
GLN
75
A
ASN
76
n
76
ASN
76
A
GLY
77
n
77
GLY
77
A
GLN
78
n
78
GLN
78
A
LYS
79
n
79
LYS
79
A
LEU
80
n
80
LEU
80
A
THR
81
n
81
THR
81
A
ALA
82
n
82
ALA
82
A
GLU
83
n
83
GLU
83
A
LYS
84
n
84
LYS
84
A
VAL
85
n
85
VAL
85
A
LYS
86
n
86
LYS
86
A
SER
87
n
87
SER
87
A
SER
88
n
88
SER
88
A
LEU
89
n
89
LEU
89
A
GLU
90
n
90
GLU
90
A
ASN
91
n
91
ASN
91
A
SER
92
n
92
SER
92
A
MET
93
n
93
MET
93
A
LYS
94
n
94
LYS
94
A
LYS
95
n
95
LYS
95
A
SER
96
n
96
SER
96
A
ASP
97
n
97
ASP
97
A
LEU
98
n
98
LEU
98
A
VAL
99
n
99
VAL
99
A
LYS
100
n
100
LYS
100
A
TYR
101
n
101
TYR
101
A
SER
102
n
102
SER
102
A
LEU
103
n
103
LEU
103
A
PRO
104
n
104
PRO
104
A
ILE
105
n
105
ILE
105
A
SER
106
n
106
SER
106
A
SER
107
n
107
SER
107
A
ILE
108
n
108
ILE
108
A
THR
109
n
109
THR
109
A
ALA
110
n
110
ALA
110
A
LYS
111
n
111
LYS
111
A
GLY
112
n
112
GLY
112
A
GLN
113
n
113
GLN
113
A
LYS
114
n
114
LYS
114
A
LEU
115
n
115
LEU
115
A
THR
116
n
116
THR
116
A
ILE
117
n
117
ILE
117
A
LYS
118
n
118
LYS
118
A
THR
119
n
119
THR
119
A
ASN
120
n
120
ASN
120
A
SER
121
n
121
SER
121
A
ALA
122
n
122
ALA
122
A
TYR
123
n
123
TYR
123
A
PRO
124
n
124
PRO
124
A
GLU
125
n
125
GLU
125
A
LEU
126
n
126
LEU
126
A
VAL
127
n
127
VAL
127
A
SER
128
n
128
SER
128
A
GLU
129
n
129
GLU
129
A
LEU
130
n
130
LEU
130
A
ALA
131
n
131
ALA
131
A
ASN
132
n
132
ASN
132
A
PRO
133
n
133
PRO
133
A
PHE
134
n
134
PHE
134
A
MET
135
n
135
MET
135
A
ALA
136
n
136
ALA
136
A
ILE
137
n
137
ILE
137
A
TYR
138
n
138
TYR
138
A
ASP
139
n
139
ASP
139
A
THR
140
n
140
THR
140
A
ASP
141
n
141
ASP
141
A
ALA
142
n
142
ALA
142
A
LYS
143
n
143
LYS
143
A
SER
144
n
144
SER
144
A
ASP
145
n
145
ASP
145
A
VAL
146
n
146
VAL
146
A
ASN
147
n
147
ASN
147
A
GLN
148
n
148
GLN
148
A
THR
149
n
149
THR
149
A
PRO
150
n
150
PRO
150
A
VAL
151
n
151
VAL
151
A
GLY
152
n
152
GLY
152
A
THR
153
n
153
THR
153
A
GLY
154
n
154
GLY
154
A
PRO
155
n
155
PRO
155
A
TYR
156
n
156
TYR
156
A
GLN
157
n
157
GLN
157
A
ILE
158
n
158
ILE
158
A
LYS
159
n
159
LYS
159
A
ASP
160
n
160
ASP
160
A
TYR
161
n
161
TYR
161
A
LYS
162
n
162
LYS
162
A
GLN
163
n
163
GLN
163
A
SER
164
n
164
SER
164
A
ARG
165
n
165
ARG
165
A
LYS
166
n
166
LYS
166
A
ILE
167
n
167
ILE
167
A
SER
168
n
168
SER
168
A
LEU
169
n
169
LEU
169
A
SER
170
n
170
SER
170
A
ASN
171
n
171
ASN
171
A
PHE
172
n
172
PHE
172
A
LYS
173
n
173
LYS
173
A
ASP
174
n
174
ASP
174
A
TYR
175
n
175
TYR
175
A
TRP
176
n
176
TRP
176
A
GLN
177
n
177
GLN
177
A
GLY
178
n
178
GLY
178
A
LYS
179
n
179
LYS
179
A
PRO
180
n
180
PRO
180
A
LYS
181
n
181
LYS
181
A
LEU
182
n
182
LEU
182
A
ASP
183
n
183
ASP
183
A
HIS
184
n
184
HIS
184
A
ILE
185
n
185
ILE
185
A
THR
186
n
186
THR
186
A
VAL
187
n
187
VAL
187
A
THR
188
n
188
THR
188
A
TYR
189
n
189
TYR
189
A
GLN
190
n
190
GLN
190
A
GLU
191
n
191
GLU
191
A
ASP
192
n
192
ASP
192
A
GLY
193
n
193
GLY
193
A
ASN
194
n
194
ASN
194
A
ASN
195
n
195
ASN
195
A
ARG
196
n
196
ARG
196
A
VAL
197
n
197
VAL
197
A
ARG
198
n
198
ARG
198
A
ASN
199
n
199
ASN
199
A
LEU
200
n
200
LEU
200
A
GLU
201
n
201
GLU
201
A
SER
202
n
202
SER
202
A
GLN
203
n
203
GLN
203
A
LYS
204
n
204
LYS
204
A
ASP
205
n
205
ASP
205
A
ASP
206
n
206
ASP
206
A
LEU
207
n
207
LEU
207
A
ILE
208
n
208
ILE
208
A
THR
209
n
209
THR
209
A
ASP
210
n
210
ASP
210
A
VAL
211
n
211
VAL
211
A
PRO
212
n
212
PRO
212
A
VAL
213
n
213
VAL
213
A
ASN
214
n
214
ASN
214
A
LYS
215
n
215
LYS
215
A
VAL
216
n
216
VAL
216
A
GLN
217
n
217
GLN
217
A
ASP
218
n
218
ASP
218
A
ILE
219
n
219
ILE
219
A
GLU
220
n
220
GLU
220
A
ASN
221
n
221
ASN
221
A
ASN
222
n
222
ASN
222
A
GLN
223
n
223
GLN
223
A
ASN
224
n
224
ASN
224
A
LEU
225
n
225
LEU
225
A
LYS
226
n
226
LYS
226
A
VAL
227
n
227
VAL
227
A
SER
228
n
228
SER
228
A
LYS
229
n
229
LYS
229
A
GLU
230
n
230
GLU
230
A
SER
231
n
231
SER
231
A
GLY
232
n
232
GLY
232
A
PHE
233
n
233
PHE
233
A
ARG
234
n
234
ARG
234
A
THR
235
n
235
THR
235
A
SER
236
n
236
SER
236
A
LEU
237
n
237
LEU
237
A
LEU
238
n
238
LEU
238
A
MET
239
n
239
MET
239
A
TYR
240
n
240
TYR
240
A
ASN
241
n
241
ASN
241
A
HIS
242
n
242
HIS
242
A
THR
243
n
243
THR
243
A
ASN
244
n
244
ASN
244
A
LYS
245
n
245
LYS
245
A
LYS
246
n
246
LYS
246
A
MET
247
n
247
MET
247
A
THR
248
n
248
THR
248
A
LYS
249
n
249
LYS
249
A
SER
250
n
250
SER
250
A
VAL
251
n
251
VAL
251
A
ARG
252
n
252
ARG
252
A
GLU
253
n
253
GLU
253
A
ALA
254
n
254
ALA
254
A
LEU
255
n
255
LEU
255
A
ASP
256
n
256
ASP
256
A
HIS
257
n
257
HIS
257
A
ILE
258
n
258
ILE
258
A
ILE
259
n
259
ILE
259
A
ASP
260
n
260
ASP
260
A
ARG
261
n
261
ARG
261
A
GLN
262
n
262
GLN
262
A
GLY
263
n
263
GLY
263
A
ILE
264
n
264
ILE
264
A
ALA
265
n
265
ALA
265
A
ASP
266
n
266
ASP
266
A
HIS
267
n
267
HIS
267
A
ILE
268
n
268
ILE
268
A
TYR
269
n
269
TYR
269
A
GLN
270
n
270
GLN
270
A
GLY
271
n
271
GLY
271
A
TYR
272
n
272
TYR
272
A
ALA
273
n
273
ALA
273
A
LYS
274
n
274
LYS
274
A
PRO
275
n
275
PRO
275
A
ALA
276
n
276
ALA
276
A
THR
277
n
277
THR
277
A
SER
278
n
278
SER
278
A
PRO
279
n
279
PRO
279
A
PHE
280
n
280
PHE
280
A
ASN
281
n
281
ASN
281
A
ASP
282
n
282
ASP
282
A
LYS
283
n
283
LYS
283
A
ILE
284
n
284
ILE
284
A
PRO
285
n
285
PRO
285
A
TYR
286
n
286
TYR
286
A
ILE
287
n
287
ILE
287
A
LYS
288
n
288
LYS
288
A
GLU
289
n
289
GLU
289
A
PRO
290
n
290
PRO
290
A
LYS
291
n
291
LYS
291
A
LEU
292
n
292
LEU
292
A
THR
293
n
293
THR
293
A
LYS
294
n
294
LYS
294
A
GLN
295
n
295
GLN
295
A
ASN
296
n
296
ASN
296
A
ILE
297
n
297
ILE
297
A
GLU
298
n
298
GLU
298
A
GLN
299
n
299
GLN
299
A
ALA
300
n
300
ALA
300
A
LYS
301
n
301
LYS
301
A
MET
302
n
302
MET
302
A
LEU
303
n
303
LEU
303
A
LEU
304
n
304
LEU
304
A
ALA
305
n
305
ALA
305
A
LYS
306
n
306
LYS
306
A
ASP
307
n
307
ASP
307
A
GLY
308
n
308
GLY
308
A
TYR
309
n
309
TYR
309
A
THR
310
n
310
THR
310
A
LYS
311
n
311
LYS
311
A
GLU
312
n
312
GLU
312
A
HIS
313
n
313
HIS
313
A
PRO
314
n
314
PRO
314
A
LEU
315
n
315
LEU
315
A
LYS
316
n
316
LYS
316
A
ILE
317
n
317
ILE
317
A
LYS
318
n
318
LYS
318
A
LEU
319
n
319
LEU
319
A
ILE
320
n
320
ILE
320
A
THR
321
n
321
THR
321
A
TYR
322
n
322
TYR
322
A
ASP
323
n
323
ASP
323
A
GLY
324
n
324
GLY
324
A
ARG
325
n
325
ARG
325
A
PRO
326
n
326
PRO
326
A
GLU
327
n
327
GLU
327
A
LEU
328
n
328
LEU
328
A
SER
329
n
329
SER
329
A
LYS
330
n
330
LYS
330
A
ILE
331
n
331
ILE
331
A
ALA
332
n
332
ALA
332
A
GLN
333
n
333
GLN
333
A
VAL
334
n
334
VAL
334
A
LEU
335
n
335
LEU
335
A
GLN
336
n
336
GLN
336
A
SER
337
n
337
SER
337
A
ASP
338
n
338
ASP
338
A
ALA
339
n
339
ALA
339
A
LYS
340
n
340
LYS
340
A
LYS
341
n
341
LYS
341
A
ALA
342
n
342
ALA
342
A
ASN
343
n
343
ASN
343
A
ILE
344
n
344
ILE
344
A
GLU
345
n
345
GLU
345
A
ILE
346
n
346
ILE
346
A
ASP
347
n
347
ASP
347
A
ILE
348
n
348
ILE
348
A
LYS
349
n
349
LYS
349
A
SER
350
n
350
SER
350
A
VAL
351
n
351
VAL
351
A
ASP
352
n
352
ASP
352
A
ASP
353
n
353
ASP
353
A
ILE
354
n
354
ILE
354
A
GLU
355
n
355
GLU
355
A
GLY
356
n
356
GLY
356
A
TYR
357
n
357
TYR
357
A
LEU
358
n
358
LEU
358
A
LYS
359
n
359
LYS
359
A
ASP
360
n
360
ASP
360
A
ARG
361
n
361
ARG
361
A
SER
362
n
362
SER
362
A
ALA
363
n
363
ALA
363
A
TRP
364
n
364
TRP
364
A
ASP
365
n
365
ASP
365
A
ALA
366
n
366
ALA
366
A
THR
367
n
367
THR
367
A
MET
368
n
368
MET
368
A
TYR
369
n
369
TYR
369
A
SER
370
n
370
SER
370
A
PHE
371
n
371
PHE
371
A
GLY
372
n
372
GLY
372
A
THR
373
n
373
THR
373
A
ILE
374
n
374
ILE
374
A
PRO
375
n
375
PRO
375
A
ARG
376
n
376
ARG
376
A
GLY
377
n
377
GLY
377
A
ASP
378
n
378
ASP
378
A
THR
379
n
379
THR
379
A
GLY
380
n
380
GLY
380
A
TYR
381
n
381
TYR
381
A
PHE
382
n
382
PHE
382
A
PHE
383
n
383
PHE
383
A
ASN
384
n
384
ASN
384
A
GLN
385
n
385
GLN
385
A
ALA
386
n
386
ALA
386
A
TYR
387
n
387
TYR
387
A
LYS
388
n
388
LYS
388
A
LYS
389
n
389
LYS
389
A
ASP
390
n
390
ASP
390
A
GLY
391
n
391
GLY
391
A
ALA
392
n
392
ALA
392
A
ILE
393
n
393
ILE
393
A
ASN
394
n
394
ASN
394
A
LYS
395
n
395
LYS
395
A
GLY
396
n
396
GLY
396
A
ASP
397
n
397
ASP
397
A
TYR
398
n
398
TYR
398
A
ASN
399
n
399
ASN
399
A
ASN
400
n
400
ASN
400
A
SER
401
n
401
SER
401
A
ASN
402
n
402
ASN
402
A
VAL
403
n
403
VAL
403
A
ASP
404
n
404
ASP
404
A
ASP
405
n
405
ASP
405
A
LEU
406
n
406
LEU
406
A
ILE
407
n
407
ILE
407
A
ASN
408
n
408
ASN
408
A
GLN
409
n
409
GLN
409
A
LEU
410
n
410
LEU
410
A
ASN
411
n
411
ASN
411
A
HIS
412
n
412
HIS
412
A
THR
413
n
413
THR
413
A
VAL
414
n
414
VAL
414
A
ASP
415
n
415
ASP
415
A
VAL
416
n
416
VAL
416
A
LYS
417
n
417
LYS
417
A
GLU
418
n
418
GLU
418
A
ARG
419
n
419
ARG
419
A
HIS
420
n
420
HIS
420
A
ASN
421
n
421
ASN
421
A
ILE
422
n
422
ILE
422
A
SER
423
n
423
SER
423
A
ASN
424
n
424
ASN
424
A
ASP
425
n
425
ASP
425
A
ILE
426
n
426
ILE
426
A
ILE
427
n
427
ILE
427
A
LYS
428
n
428
LYS
428
A
LEU
429
n
429
LEU
429
A
SER
430
n
430
SER
430
A
SER
431
n
431
SER
431
A
ARG
432
n
432
ARG
432
A
ASP
433
n
433
ASP
433
A
VAL
434
n
434
VAL
434
A
PRO
435
n
435
PRO
435
A
ASN
436
n
436
ASN
436
A
SER
437
n
437
SER
437
A
TYR
438
n
438
TYR
438
A
ILE
439
n
439
ILE
439
A
ALA
440
n
440
ALA
440
A
TYR
441
n
441
TYR
441
A
ASN
442
n
442
ASN
442
A
ASP
443
n
443
ASP
443
A
GLN
444
n
444
GLN
444
A
ILE
445
n
445
ILE
445
A
VAL
446
n
446
VAL
446
A
ALA
447
n
447
ALA
447
A
ALA
448
n
448
ALA
448
A
ASN
449
n
449
ASN
449
A
SER
450
n
450
SER
450
A
LYS
451
n
451
LYS
451
A
VAL
452
n
452
VAL
452
A
LYS
453
n
453
LYS
453
A
ASN
454
n
454
ASN
454
A
TYR
455
n
455
TYR
455
A
LYS
456
n
456
LYS
456
A
VAL
457
n
457
VAL
457
A
THR
458
n
458
THR
458
A
PRO
459
n
459
PRO
459
A
GLU
460
n
460
GLU
460
A
GLY
461
n
461
GLY
461
A
ILE
462
n
462
ILE
462
A
TYR
463
n
463
TYR
463
A
LEU
464
n
464
LEU
464
A
ILE
465
n
465
ILE
465
A
ASP
466
n
466
ASP
466
A
TYR
467
n
467
TYR
467
A
ARG
468
n
468
ARG
468
A
THR
469
n
469
THR
469
A
THR
470
n
470
THR
470
A
ILE
471
n
471
ILE
471
A
GLU
472
n
472
GLU
472
A
n
473
473
A
0.7958
-0.3292
-0.3269
2.3666
1.3837
2.5352
-0.0234
0.0601
-0.0599
-0.0159
-0.0216
0.0963
-0.0287
-0.1130
0.0400
0.0789
0.0077
0.0244
0.1169
0.0210
0.1162
refined
42.9096
43.3975
11.9214
X-RAY DIFFRACTION
1.0273
0.0989
0.1839
3.4146
0.4622
1.4659
-0.0781
-0.0810
0.0880
0.3458
0.0752
-0.1379
-0.0446
0.1513
0.0059
0.1156
0.0241
-0.0130
0.1598
0.0093
0.0945
refined
48.4124
57.6416
29.0537
X-RAY DIFFRACTION
0.8906
-0.3341
0.2052
1.3181
-0.1117
0.9672
-0.0173
0.0391
0.0837
-0.0673
-0.0089
-0.0782
-0.0489
0.0591
0.0249
0.0831
-0.0212
0.0139
0.1091
0.0011
0.1013
refined
38.3607
70.5193
7.7028
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 8 through 145 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 146 through 230 )
X-RAY DIFFRACTION
3
chain 'A' and (resid 231 through 472 )
author_and_software_defined_assembly
PISA
1
monomeric
A
HIS
502
C
N
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
502
C
ND1
HIS
1_555
87.2
A
HIS
502
C
N
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
502
C
OXT
HIS
1_555
80.7
A
HIS
502
C
ND1
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
502
C
OXT
HIS
1_555
90.2
A
HIS
502
C
N
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
O
HIS
1_555
95.6
A
HIS
502
C
ND1
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
O
HIS
1_555
177.2
A
HIS
502
C
OXT
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
O
HIS
1_555
89.7
A
HIS
502
C
N
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
ND1
HIS
1_555
97.1
A
HIS
502
C
ND1
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
ND1
HIS
1_555
92.7
A
HIS
502
C
OXT
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
ND1
HIS
1_555
176.3
A
HIS
503
D
O
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
ND1
HIS
1_555
87.6
A
HIS
502
C
N
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
N
HIS
1_555
176.2
A
HIS
502
C
ND1
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
N
HIS
1_555
95.2
A
HIS
502
C
OXT
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
N
HIS
1_555
96.2
A
HIS
503
D
O
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
N
HIS
1_555
82.1
A
HIS
503
D
ND1
HIS
1_555
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
N
HIS
1_555
85.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
159
A
N
LYS
159
A
O
SER
168
A
O
SER
168
A
N
LEU
169
A
N
LEU
169
A
O
ILE
185
A
O
ILE
185
A
O
THR
186
A
O
THR
186
A
N
ILE
13
A
N
ILE
13
A
N
SER
14
A
N
SER
14
A
O
LEU
207
A
O
LEU
207
A
N
ILE
208
A
N
ILE
208
A
O
ALA
447
A
O
ALA
447
A
O
TYR
441
A
O
TYR
441
A
N
LYS
274
A
N
LYS
274
A
N
LYS
159
A
N
LYS
159
A
O
SER
168
A
O
SER
168
A
N
LEU
169
A
N
LEU
169
A
O
ILE
185
A
O
ILE
185
A
O
THR
186
A
O
THR
186
A
N
ILE
13
A
N
ILE
13
A
N
SER
14
A
N
SER
14
A
O
LEU
207
A
O
LEU
207
A
N
ILE
208
A
N
ILE
208
A
O
ALA
447
A
O
ALA
447
A
O
VAL
446
A
O
VAL
446
A
N
SER
228
A
N
SER
228
A
N
MET
239
A
N
MET
239
A
O
THR
367
A
O
THR
367
A
O
MET
368
A
O
MET
368
A
N
ILE
320
A
N
ILE
320
A
N
LEU
315
A
N
LEU
315
A
O
GLU
345
A
O
GLU
345
A
N
LYS
41
A
N
LYS
41
A
O
GLU
49
A
O
GLU
49
A
N
LYS
54
A
N
LYS
54
A
O
GLU
67
A
O
GLU
67
A
N
LEU
64
A
N
LEU
64
A
O
ILE
117
A
O
ILE
117
A
O
LYS
118
A
O
LYS
118
A
N
SER
106
A
N
SER
106
A
N
LYS
453
A
N
LYS
453
A
O
THR
470
A
O
THR
470
1
A
CYS
1
A
CYS
1
1
Y
1
A
GLY
2
A
GLY
2
1
Y
1
A
SER
3
A
SER
3
1
Y
1
A
MET
4
A
MET
4
1
Y
1
A
HIS
5
A
HIS
5
1
Y
1
A
SER
6
A
SER
6
1
Y
1
A
SER
7
A
SER
7
1
Y
1
A
ARG
473
A
ARG
473
1
Y
1
A
LYS
9
-106.61
55.66
1
A
LEU
17
69.52
66.43
1
A
LYS
20
-100.48
-97.23
1
A
ALA
51
-120.97
-70.87
1
A
ARG
165
-133.83
-55.24
1
A
THR
277
-126.45
-66.73
1
A
ASN
343
70.78
37.56
1
A
ILE
374
-153.35
71.33
1
A
LEU
464
-146.71
-57.31
0.1850
0.1483
0.1501
1.700
45.689
2700
53988
5.00
99.58
0.21
Random
1
1.36
MOLECULAR REPLACEMENT
16.57
0.90
1.11
PDB ENTRY 3RQT
ML
FLAT BULK SOLVENT MODEL
1.700
45.689
415
4263
140
0
3708
0.015
3977
1.564
5355
15.953
1540
0.128
584
0.008
685
0.3227
0.2733
1.7309
139
2649
99.00
0.2781
0.2398
1.7642
141
2670
99.00
0.2257
0.1938
1.8002
139
2644
99.00
0.2321
0.1680
1.8394
139
2640
99.00
0.2004
0.1597
1.8822
141
2686
100.00
0.2161
0.1498
1.9292
141
2661
99.00
0.1987
0.1469
1.9814
139
2645
99.00
0.2033
0.1483
2.0397
141
2680
100.00
0.1791
0.1505
2.1055
141
2679
100.00
0.1899
0.1386
2.1808
141
2674
100.00
0.1743
0.1397
2.2681
141
2686
100.00
0.1794
0.1395
2.3713
142
2690
100.00
0.1777
0.1488
2.4963
142
2711
100.00
0.1959
0.1492
2.6527
142
2695
100.00
0.2006
0.1457
2.8575
144
2732
100.00
0.1597
0.1388
3.1450
144
2732
100.00
0.1690
0.1335
3.6000
144
2738
100.00
0.1412
0.1270
4.5349
146
2776
100.00
0.1984
0.1603
45.7057
153
2900
99.00
1.70
45.69
4OFJ
54220
53990
-3.0
0.079
1
17.04
7.2
99.6
1.70
1.80
4.23
8418
0.652
1
7.4
99.4
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.8.2_1309)
data reduction
XDS
data scaling
XSCALE
Crystal structure of NikA from Staphylococcus aureus in complex with Ni(L-His)2
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
6
N
N
A
ASP
28
A
ASP
28
HELX_P
A
ILE
33
A
ILE
33
1
1
6
A
THR
81
A
THR
81
HELX_P
A
SER
96
A
SER
96
1
2
16
A
SER
96
A
SER
96
HELX_P
A
LEU
103
A
LEU
103
1
3
8
A
GLU
125
A
GLU
125
HELX_P
A
LEU
130
A
LEU
130
1
4
6
A
ALA
131
A
ALA
131
HELX_P
A
ALA
136
A
ALA
136
5
5
6
A
ASP
192
A
ASP
192
HELX_P
A
SER
202
A
SER
202
1
6
11
A
PRO
212
A
PRO
212
HELX_P
A
ASN
214
A
ASN
214
5
7
3
A
LYS
215
A
LYS
215
HELX_P
A
ASN
221
A
ASN
221
1
8
7
A
THR
248
A
THR
248
HELX_P
A
ILE
259
A
ILE
259
1
9
12
A
ASP
260
A
ASP
260
HELX_P
A
ILE
268
A
ILE
268
1
10
9
A
ASN
296
A
ASN
296
HELX_P
A
ASP
307
A
ASP
307
1
11
12
A
GLU
327
A
GLU
327
HELX_P
A
LYS
341
A
LYS
341
1
12
15
A
ASP
353
A
ASP
353
HELX_P
A
LYS
359
A
LYS
359
1
13
7
A
THR
379
A
THR
379
HELX_P
A
TYR
387
A
TYR
387
1
14
9
A
ASN
400
A
ASN
400
HELX_P
A
HIS
412
A
HIS
412
1
15
13
A
ASP
415
A
ASP
415
HELX_P
A
VAL
434
A
VAL
434
1
16
20
metalc
2.066
A
NI
501
B
NI
NI
1_555
A
HIS
502
C
N
HIS
1_555
metalc
2.108
A
NI
501
B
NI
NI
1_555
A
HIS
502
C
ND1
HIS
1_555
metalc
2.116
A
NI
501
B
NI
NI
1_555
A
HIS
502
C
OXT
HIS
1_555
metalc
2.106
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
O
HIS
1_555
metalc
2.154
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
ND1
HIS
1_555
metalc
2.190
A
NI
501
B
NI
NI
1_555
A
HIS
503
D
N
HIS
1_555
TRANSPORT PROTEIN
Extracytoplasmic, Nickel import, Metal transport, ABC-type importer, extracytoplasmic nickel-binding protein, TRANSPORT PROTEIN
Q5HJE1_STAAC
UNP
1
19
Q5HJE1
CGSMHSSGKDLNISLPLKTKSIAPYETDVPVKIGAAESLFKTNDQGKIEKALVKSYHQPNDTTLDIELKDNIKFQNGQKL
TAEKVKSSLENSMKKSDLVKYSLPISSITAKGQKLTIKTNSAYPELVSELANPFMAIYDTDAKSDVNQTPVGTGPYQIKD
YKQSRKISLSNFKDYWQGKPKLDHITVTYQEDGNNRVRNLESQKDDLITDVPVNKVQDIENNQNLKVSKESGFRTSLLMY
NHTNKKMTKSVREALDHIIDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQAKMLLAKDGYTKEHPLKIKLI
TYDGRPELSKIAQVLQSDAKKANIEIDIKSVDDIEGYLKDRSAWDATMYSFGTIPRGDTGYFFNQAYKKDGAINKGDYNN
SNVDDLINQLNHTVDVKERHNISNDIIKLSSRDVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIDYRTTIER
19
491
4OFJ
1
473
Q5HJE1
A
1
1
473
7
10
2
4
2
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
156
A
TYR
156
A
LYS
162
A
LYS
162
A
LYS
166
A
LYS
166
A
ASN
171
A
ASN
171
A
HIS
184
A
HIS
184
A
TYR
189
A
TYR
189
A
ASP
10
A
ASP
10
A
LEU
15
A
LEU
15
A
LEU
207
A
LEU
207
A
ILE
208
A
ILE
208
A
ASN
436
A
ASN
436
A
ASN
449
A
ASN
449
A
ALA
273
A
ALA
273
A
PRO
275
A
PRO
275
A
TYR
156
A
TYR
156
A
LYS
162
A
LYS
162
A
LYS
166
A
LYS
166
A
ASN
171
A
ASN
171
A
HIS
184
A
HIS
184
A
TYR
189
A
TYR
189
A
ASP
10
A
ASP
10
A
LEU
15
A
LEU
15
A
LEU
207
A
LEU
207
A
ILE
208
A
ILE
208
A
ASN
436
A
ASN
436
A
ASN
449
A
ASN
449
A
LEU
225
A
LEU
225
A
TYR
240
A
TYR
240
A
ALA
366
A
ALA
366
A
GLY
372
A
GLY
372
A
LEU
315
A
LEU
315
A
THR
321
A
THR
321
A
ILE
344
A
ILE
344
A
SER
350
A
SER
350
A
PHE
40
A
PHE
40
A
THR
42
A
THR
42
A
ILE
48
A
ILE
48
A
LYS
50
A
LYS
50
A
VAL
53
A
VAL
53
A
ASN
60
A
ASN
60
A
THR
63
A
THR
63
A
LEU
68
A
LEU
68
A
LYS
114
A
LYS
114
A
THR
119
A
THR
119
A
ILE
105
A
ILE
105
A
LYS
111
A
LYS
111
A
VAL
452
A
VAL
452
A
LYS
453
A
LYS
453
A
THR
470
A
THR
470
A
ILE
471
A
ILE
471
BINDING SITE FOR RESIDUE NI A 501
A
NI
501
Software
2
BINDING SITE FOR RESIDUE HIS A 502
A
HIS
502
Software
11
BINDING SITE FOR RESIDUE HIS A 503
A
HIS
503
Software
10
BINDING SITE FOR RESIDUE EPE A 504
A
EPE
504
Software
13
BINDING SITE FOR RESIDUE GOL A 505
A
GOL
505
Software
5
BINDING SITE FOR RESIDUE GOL A 506
A
GOL
506
Software
5
BINDING SITE FOR RESIDUE GOL A 507
A
GOL
507
Software
6
BINDING SITE FOR RESIDUE GOL A 508
A
GOL
508
Software
6
BINDING SITE FOR RESIDUE GOL A 509
A
GOL
509
Software
9
BINDING SITE FOR RESIDUE GOL A 510
A
GOL
510
Software
9
BINDING SITE FOR RESIDUE GOL A 511
A
GOL
511
Software
6
BINDING SITE FOR RESIDUE GOL A 512
A
GOL
512
Software
6
BINDING SITE FOR RESIDUE GOL A 513
A
GOL
513
Software
6
BINDING SITE FOR RESIDUE GOL A 514
A
GOL
514
Software
10
BINDING SITE FOR RESIDUE GOL A 515
A
GOL
515
Software
9
BINDING SITE FOR RESIDUE GOL A 516
A
GOL
516
Software
9
BINDING SITE FOR RESIDUE GOL A 517
A
GOL
517
Software
7
BINDING SITE FOR RESIDUE GOL A 518
A
GOL
518
Software
6
BINDING SITE FOR RESIDUE GOL A 519
A
GOL
519
Software
4
BINDING SITE FOR RESIDUE GOL A 520
A
GOL
520
Software
6
BINDING SITE FOR RESIDUE GOL A 521
A
GOL
521
Software
11
A
HIS
502
C
HIS
2
1_555
A
HIS
503
D
HIS
2
1_555
A
LEU
17
A
LEU
17
11
1_555
A
ARG
234
A
ARG
234
11
1_555
A
TYR
322
A
TYR
322
11
1_555
A
ARG
325
A
ARG
325
11
1_555
A
ILE
354
A
ILE
354
11
1_555
A
GLU
355
A
GLU
355
11
1_555
A
TYR
369
A
TYR
369
11
1_555
A
SER
370
A
SER
370
11
1_555
A
NI
501
B
NI
11
1_555
A
HIS
503
D
HIS
11
1_555
A
HOH
615
W
HOH
11
1_555
A
ARG
234
A
ARG
234
10
1_555
A
GLU
355
A
GLU
355
10
1_555
A
SER
370
A
SER
370
10
1_555
A
PHE
371
A
PHE
371
10
1_555
A
GLY
372
A
GLY
372
10
1_555
A
NI
501
B
NI
10
1_555
A
HIS
502
C
HIS
10
1_555
A
HOH
726
W
HOH
10
1_555
A
HOH
887
W
HOH
10
1_555
A
HOH
993
W
HOH
10
1_555
A
ILE
48
A
ILE
48
13
4_465
A
GLU
49
A
GLU
49
13
4_465
A
LYS
50
A
LYS
50
13
4_465
A
TYR
56
A
TYR
56
13
4_465
A
TYR
101
A
TYR
101
13
1_555
A
LYS
389
A
LYS
389
13
1_555
A
ASP
390
A
ASP
390
13
1_555
A
ASP
404
A
ASP
404
13
1_555
A
GOL
511
L
GOL
13
1_555
A
HOH
765
W
HOH
13
1_555
A
HOH
982
W
HOH
13
1_555
A
HOH
1003
W
HOH
13
4_465
A
HOH
1014
W
HOH
13
1_555
A
LYS
54
A
LYS
54
5
1_555
A
LYS
69
A
LYS
69
5
1_555
A
ASP
70
A
ASP
70
5
1_555
A
ASN
402
A
ASN
402
5
4_565
A
HOH
846
W
HOH
5
1_555
A
THR
109
A
THR
109
5
1_555
A
ALA
110
A
ALA
110
5
1_555
A
LYS
114
A
LYS
114
5
1_555
A
THR
116
A
THR
116
5
1_555
A
LYS
245
A
LYS
245
5
4_565
A
GLU
83
A
GLU
83
6
1_555
A
LYS
86
A
LYS
86
6
1_555
A
THR
109
A
THR
109
6
1_555
A
ALA
110
A
ALA
110
6
1_555
A
LYS
341
A
LYS
341
6
1_545
A
GOL
510
K
GOL
6
1_545
A
LYS
159
A
LYS
159
6
3_655
A
LYS
318
A
LYS
318
6
1_555
A
LYS
349
A
LYS
349
6
1_555
A
TYR
357
A
TYR
357
6
1_555
A
HOH
812
W
HOH
6
1_555
A
HOH
870
W
HOH
6
3_655
A
LYS
32
A
LYS
32
9
1_555
A
LYS
456
A
LYS
456
9
1_555
A
GLY
461
A
GLY
461
9
1_555
A
ILE
462
A
ILE
462
9
1_555
A
TYR
463
A
TYR
463
9
1_555
A
HOH
627
W
HOH
9
1_555
A
HOH
699
W
HOH
9
1_555
A
HOH
989
W
HOH
9
1_555
A
HOH
991
W
HOH
9
1_555
A
GLU
83
A
GLU
83
9
1_565
A
ALA
110
A
ALA
110
9
1_565
A
GLN
295
A
GLN
295
9
1_555
A
ASP
338
A
ASP
338
9
1_555
A
LYS
341
A
LYS
341
9
1_555
A
GOL
507
H
GOL
9
1_565
A
HOH
693
W
HOH
9
1_555
A
HOH
792
W
HOH
9
1_555
A
HOH
947
W
HOH
9
1_555
A
TYR
101
A
TYR
101
6
1_555
A
ASN
384
A
ASN
384
6
1_555
A
LYS
388
A
LYS
388
6
1_555
A
LYS
389
A
LYS
389
6
1_555
A
EPE
504
E
EPE
6
1_555
A
HOH
941
W
HOH
6
1_555
A
ASP
260
A
ASP
260
6
1_555
A
GLY
263
A
GLY
263
6
1_555
A
HIS
267
A
HIS
267
6
1_555
A
VAL
334
A
VAL
334
6
1_555
A
HOH
624
W
HOH
6
1_555
A
HOH
672
W
HOH
6
1_555
A
GLU
90
A
GLU
90
6
1_555
A
MET
93
A
MET
93
6
1_555
A
ILE
105
A
ILE
105
6
1_555
A
SER
106
A
SER
106
6
1_555
A
SER
107
A
SER
107
6
1_555
A
ILE
108
A
ILE
108
6
1_555
A
SER
55
A
SER
55
10
4_465
A
GLU
67
A
GLU
67
10
4_465
A
ARG
252
A
ARG
252
10
1_555
A
TYR
398
A
TYR
398
10
1_555
A
ASN
399
A
ASN
399
10
1_555
A
ASN
400
A
ASN
400
10
1_555
A
ASP
433
A
ASP
433
10
1_555
A
GOL
521
V
GOL
10
1_555
A
HOH
707
W
HOH
10
1_555
A
HOH
1011
W
HOH
10
4_465
A
ASP
256
A
ASP
256
9
1_555
A
ARG
261
A
ARG
261
9
1_555
A
THR
277
A
THR
277
9
1_555
A
LYS
291
A
LYS
291
9
1_555
A
THR
293
A
THR
293
9
1_555
A
SER
431
A
SER
431
9
1_555
A
HOH
606
W
HOH
9
1_555
A
HOH
609
W
HOH
9
1_555
A
HOH
621
W
HOH
9
1_555
A
GLN
58
A
GLN
58
9
1_555
A
ASN
60
A
ASN
60
9
1_555
A
ASP
61
A
ASP
61
9
1_555
A
THR
63
A
THR
63
9
1_555
A
THR
119
A
THR
119
9
1_555
A
ALA
122
A
ALA
122
9
1_555
A
TYR
123
A
TYR
123
9
1_555
A
HOH
675
W
HOH
9
1_555
A
HOH
984
W
HOH
9
1_555
A
ASP
145
A
ASP
145
7
1_555
A
THR
149
A
THR
149
7
1_555
A
ILE
348
A
ILE
348
7
3_645
A
LYS
349
A
LYS
349
7
3_645
A
SER
350
A
SER
350
7
3_645
A
HOH
906
W
HOH
7
1_555
A
HOH
950
W
HOH
7
1_555
A
TYR
463
A
TYR
463
6
1_555
A
HOH
640
W
HOH
6
1_555
A
HOH
762
W
HOH
6
1_555
A
HOH
821
W
HOH
6
1_555
A
HOH
848
W
HOH
6
1_555
A
HOH
862
W
HOH
6
1_555
A
LYS
226
A
LYS
226
4
1_555
A
LYS
453
A
LYS
453
4
1_555
A
ASN
454
A
ASN
454
4
1_555
A
TYR
455
A
TYR
455
4
1_555
A
LYS
143
A
LYS
143
6
3_655
A
LYS
349
A
LYS
349
6
1_555
A
VAL
351
A
VAL
351
6
1_555
A
ASP
352
A
ASP
352
6
1_555
A
ASP
353
A
ASP
353
6
1_555
A
HOH
826
W
HOH
6
1_555
A
LYS
114
A
LYS
114
11
4_465
A
HIS
242
A
HIS
242
11
1_555
A
LYS
245
A
LYS
245
11
1_555
A
MET
247
A
MET
247
11
1_555
A
THR
248
A
THR
248
11
1_555
A
LYS
249
A
LYS
249
11
1_555
A
ARG
252
A
ARG
252
11
1_555
A
GOL
514
O
GOL
11
1_555
A
HOH
707
W
HOH
11
1_555
A
HOH
881
W
HOH
11
1_555
A
HOH
992
W
HOH
11
1_555
19
P 21 21 21