0.018471 0.000000 0.002006 -0.000000 0.017120 0.000000 0.000000 -0.000000 0.012754 0.00000 0.00000 0.00000 Ravala, S.K. Singh, S. Yadav, G.S. Karthikeyan, S. Chakraborti, P.K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 96.20 90.00 54.139 58.412 78.867 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N C N 124 N O N 125 N C N 126 N O N 127 N C N 128 N O N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N S N 305 N O N 306 N O N 307 N O N 308 N O N 309 N N N 310 S C N 311 N C N 312 N O N 313 R C N 314 N O N 315 N C N 316 N O N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N N Y 335 N C Y 336 N C Y 337 N C Y 338 N C Y 339 N C N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N N N 354 S C N 355 N C N 356 N O N 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N C Y 362 N C Y 363 N C N 364 N O N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N N N 378 S C N 379 N C N 380 N O N 381 N C N 382 N C N 383 N C N 384 N O N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N doub N 317 N sing N 318 N sing N 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N doub Y 326 N sing Y 327 N sing N 328 N sing Y 329 N sing Y 330 N doub N 331 N sing Y 332 N doub N 333 N sing Y 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing Y 349 N doub Y 350 N sing Y 351 N sing N 352 N sing Y 353 N doub N 354 N sing Y 355 N doub N 356 N sing Y 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N doub N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing UK Febs J. 1742-464X 282 1419 1431 10.1111/febs.13230 25665034 Evidence that phosphorylation of threonine in the GT motif triggers activation of PknA, a eukaryotic-type serine/threonine kinase from Mycobacterium tuberculosis. 2015 10.2210/pdb4ow8/pdb pdb_00004ow8 100 1 Varimax Optics IMAGE PLATE 2013-10-24 MAR scanner 345 mm plate Mirror SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU MICROMAX-007 HF 30449.021 Serine/threonine-protein kinase PknA 2.7.11.1 kinase domain (UNP residues 1-283) 1 man polymer 92.094 GLYCEROL 1 syn non-polymer 96.063 SULFATE ION 1 syn non-polymer 18.015 water 86 nat water no no MSPRVGVTLSGRYRLQRLIATGGMGQVWEAVDNRLGRRVAVKVLKSEFSSDPEFIERFRAEARTTAMLNHPGIASVHDYG ESQMNGEGRTAYLVMELVNGEPLNSVLKRTGRLSLRHALDMLEQTGRALQIAHAAGLVHRDVKPGNILITPTGQVKITDF GIAKAVDAAPVTQTGMVMGTAQYIAPEQALGHDASPASDVYSLGVVGYEAVSGKRPFAGDGALTVAMKHIKEPPPPLPPD LPPNVRELIEITLVKNPAMRYRSGGPFADAVAAVRAGRRPPRP MSPRVGVTLSGRYRLQRLIATGGMGQVWEAVDNRLGRRVAVKVLKSEFSSDPEFIERFRAEARTTAMLNHPGIASVHDYG ESQMNGEGRTAYLVMELVNGEPLNSVLKRTGRLSLRHALDMLEQTGRALQIAHAAGLVHRDVKPGNILITPTGQVKITDF GIAKAVDAAPVTQTGMVMGTAQYIAPEQALGHDASPASDVYSLGVVGYEAVSGKRPFAGDGALTVAMKHIKEPPPPLPPD LPPNVRELIEITLVKNPAMRYRSGGPFADAVAAVRAGRRPPRP A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 283 MT0018,MTCY10H4.15c,RV0015c,pknA 1773 Mycobacterium tuberculosis 469008 Escherichia coli BL21(DE3)pLysS Plasmid Biological sequence 1 2.07 40.5 VAPOR DIFFUSION, SITTING DROP 6.5 0.25 M NaCl, 1.1 M (NH4)2SO4, 0.1 M Bis-Tris (pH 6.5) 293 entity_src_gen pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list software struct_keywords struct_site symmetry chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model refine_hist repository Initial release Database references Database references Database references Database references Derived calculations Other Refinement description Source and taxonomy Structure summary Data collection Database references Refinement description 1 0 2015-02-04 1 1 2015-02-25 1 2 2015-03-04 1 3 2015-03-11 1 4 2015-04-22 1 5 2017-11-22 1 6 2023-09-27 _entity_src_gen.pdbx_alt_source_flag _pdbx_database_status.pdb_format_compatible _pdbx_struct_assembly.oligomeric_details _pdbx_struct_oper_list.symmetry_operation _struct_keywords.text _struct_site.details _symmetry.Int_Tables_number _database_2.pdbx_DOI _database_2.pdbx_database_accession _refine_hist.number_atoms_solvent _refine_hist.pdbx_number_atoms_ligand _refine_hist.pdbx_number_atoms_nucleic_acid _refine_hist.pdbx_number_atoms_protein India CSIR N RCSB Y RCSB 2014-01-31 REL REL GOL GLYCEROL SO4 SULFATE ION HOH water 1O6Y PDB experimental model GOL 1 2 GOL GOL 301 A SO4 1 3 SO4 SO4 302 A HOH 86 4 HOH HOH 401 A HOH 50 4 HOH HOH 402 A HOH 21 4 HOH HOH 403 A HOH 75 4 HOH HOH 404 A HOH 68 4 HOH HOH 405 A HOH 45 4 HOH HOH 406 A HOH 64 4 HOH HOH 407 A HOH 24 4 HOH HOH 408 A HOH 23 4 HOH HOH 409 A HOH 61 4 HOH HOH 410 A HOH 69 4 HOH HOH 411 A HOH 38 4 HOH HOH 412 A HOH 22 4 HOH HOH 413 A HOH 53 4 HOH HOH 414 A HOH 59 4 HOH HOH 415 A HOH 28 4 HOH HOH 416 A HOH 14 4 HOH HOH 417 A HOH 60 4 HOH HOH 418 A HOH 58 4 HOH HOH 419 A HOH 29 4 HOH HOH 420 A HOH 7 4 HOH HOH 421 A HOH 43 4 HOH HOH 422 A HOH 19 4 HOH HOH 423 A HOH 80 4 HOH HOH 424 A HOH 55 4 HOH HOH 425 A HOH 76 4 HOH HOH 426 A HOH 41 4 HOH HOH 427 A HOH 77 4 HOH HOH 428 A HOH 1 4 HOH HOH 429 A HOH 2 4 HOH HOH 430 A HOH 3 4 HOH HOH 431 A HOH 4 4 HOH HOH 432 A HOH 5 4 HOH HOH 433 A HOH 6 4 HOH HOH 434 A HOH 8 4 HOH HOH 435 A HOH 9 4 HOH HOH 436 A HOH 10 4 HOH HOH 437 A HOH 11 4 HOH HOH 438 A HOH 12 4 HOH HOH 439 A HOH 13 4 HOH HOH 440 A HOH 15 4 HOH HOH 441 A HOH 16 4 HOH HOH 442 A HOH 17 4 HOH HOH 443 A HOH 18 4 HOH HOH 444 A HOH 20 4 HOH HOH 445 A HOH 25 4 HOH HOH 446 A HOH 26 4 HOH HOH 447 A HOH 27 4 HOH HOH 448 A HOH 30 4 HOH HOH 449 A HOH 31 4 HOH HOH 450 A HOH 32 4 HOH HOH 451 A HOH 33 4 HOH HOH 452 A HOH 34 4 HOH HOH 453 A HOH 35 4 HOH HOH 454 A HOH 36 4 HOH HOH 455 A HOH 37 4 HOH HOH 456 A HOH 39 4 HOH HOH 457 A HOH 40 4 HOH HOH 458 A HOH 42 4 HOH HOH 459 A HOH 44 4 HOH HOH 460 A HOH 46 4 HOH HOH 461 A HOH 47 4 HOH HOH 462 A HOH 48 4 HOH HOH 463 A HOH 49 4 HOH HOH 464 A HOH 51 4 HOH HOH 465 A HOH 52 4 HOH HOH 466 A HOH 54 4 HOH HOH 467 A HOH 56 4 HOH HOH 468 A HOH 57 4 HOH HOH 469 A HOH 62 4 HOH HOH 470 A HOH 63 4 HOH HOH 471 A HOH 65 4 HOH HOH 472 A HOH 66 4 HOH HOH 473 A HOH 67 4 HOH HOH 474 A HOH 70 4 HOH HOH 475 A HOH 71 4 HOH HOH 476 A HOH 72 4 HOH HOH 477 A HOH 73 4 HOH HOH 478 A HOH 74 4 HOH HOH 479 A HOH 78 4 HOH HOH 480 A HOH 79 4 HOH HOH 481 A HOH 81 4 HOH HOH 482 A HOH 82 4 HOH HOH 483 A HOH 83 4 HOH HOH 484 A HOH 84 4 HOH HOH 485 A HOH 85 4 HOH HOH 486 A n 1 1 A n 2 2 A PRO 3 n 3 PRO 3 A ARG 4 n 4 ARG 4 A VAL 5 n 5 VAL 5 A GLY 6 n 6 GLY 6 A VAL 7 n 7 VAL 7 A THR 8 n 8 THR 8 A LEU 9 n 9 LEU 9 A SER 10 n 10 SER 10 A GLY 11 n 11 GLY 11 A ARG 12 n 12 ARG 12 A TYR 13 n 13 TYR 13 A ARG 14 n 14 ARG 14 A LEU 15 n 15 LEU 15 A GLN 16 n 16 GLN 16 A ARG 17 n 17 ARG 17 A LEU 18 n 18 LEU 18 A ILE 19 n 19 ILE 19 A ALA 20 n 20 ALA 20 A THR 21 n 21 THR 21 A GLY 22 n 22 GLY 22 A GLY 23 n 23 GLY 23 A MET 24 n 24 MET 24 A GLY 25 n 25 GLY 25 A GLN 26 n 26 GLN 26 A VAL 27 n 27 VAL 27 A TRP 28 n 28 TRP 28 A GLU 29 n 29 GLU 29 A ALA 30 n 30 ALA 30 A VAL 31 n 31 VAL 31 A ASP 32 n 32 ASP 32 A ASN 33 n 33 ASN 33 A ARG 34 n 34 ARG 34 A LEU 35 n 35 LEU 35 A GLY 36 n 36 GLY 36 A ARG 37 n 37 ARG 37 A ARG 38 n 38 ARG 38 A VAL 39 n 39 VAL 39 A ALA 40 n 40 ALA 40 A VAL 41 n 41 VAL 41 A LYS 42 n 42 LYS 42 A VAL 43 n 43 VAL 43 A LEU 44 n 44 LEU 44 A LYS 45 n 45 LYS 45 A SER 46 n 46 SER 46 A GLU 47 n 47 GLU 47 A PHE 48 n 48 PHE 48 A SER 49 n 49 SER 49 A SER 50 n 50 SER 50 A ASP 51 n 51 ASP 51 A PRO 52 n 52 PRO 52 A GLU 53 n 53 GLU 53 A PHE 54 n 54 PHE 54 A ILE 55 n 55 ILE 55 A GLU 56 n 56 GLU 56 A ARG 57 n 57 ARG 57 A PHE 58 n 58 PHE 58 A ARG 59 n 59 ARG 59 A ALA 60 n 60 ALA 60 A GLU 61 n 61 GLU 61 A ALA 62 n 62 ALA 62 A ARG 63 n 63 ARG 63 A THR 64 n 64 THR 64 A THR 65 n 65 THR 65 A ALA 66 n 66 ALA 66 A MET 67 n 67 MET 67 A LEU 68 n 68 LEU 68 A ASN 69 n 69 ASN 69 A HIS 70 n 70 HIS 70 A PRO 71 n 71 PRO 71 A GLY 72 n 72 GLY 72 A ILE 73 n 73 ILE 73 A ALA 74 n 74 ALA 74 A SER 75 n 75 SER 75 A VAL 76 n 76 VAL 76 A HIS 77 n 77 HIS 77 A ASP 78 n 78 ASP 78 A TYR 79 n 79 TYR 79 A GLY 80 n 80 GLY 80 A GLU 81 n 81 GLU 81 A SER 82 n 82 SER 82 A GLN 83 n 83 GLN 83 A n 84 84 A n 85 85 A n 86 86 A n 87 87 A n 88 88 A ARG 89 n 89 ARG 89 A THR 90 n 90 THR 90 A ALA 91 n 91 ALA 91 A TYR 92 n 92 TYR 92 A LEU 93 n 93 LEU 93 A VAL 94 n 94 VAL 94 A MET 95 n 95 MET 95 A GLU 96 n 96 GLU 96 A LEU 97 n 97 LEU 97 A VAL 98 n 98 VAL 98 A ASN 99 n 99 ASN 99 A GLY 100 n 100 GLY 100 A GLU 101 n 101 GLU 101 A PRO 102 n 102 PRO 102 A LEU 103 n 103 LEU 103 A ASN 104 n 104 ASN 104 A SER 105 n 105 SER 105 A VAL 106 n 106 VAL 106 A LEU 107 n 107 LEU 107 A LYS 108 n 108 LYS 108 A ARG 109 n 109 ARG 109 A THR 110 n 110 THR 110 A GLY 111 n 111 GLY 111 A ARG 112 n 112 ARG 112 A LEU 113 n 113 LEU 113 A SER 114 n 114 SER 114 A LEU 115 n 115 LEU 115 A ARG 116 n 116 ARG 116 A HIS 117 n 117 HIS 117 A ALA 118 n 118 ALA 118 A LEU 119 n 119 LEU 119 A ASP 120 n 120 ASP 120 A MET 121 n 121 MET 121 A LEU 122 n 122 LEU 122 A GLU 123 n 123 GLU 123 A GLN 124 n 124 GLN 124 A THR 125 n 125 THR 125 A GLY 126 n 126 GLY 126 A ARG 127 n 127 ARG 127 A ALA 128 n 128 ALA 128 A LEU 129 n 129 LEU 129 A GLN 130 n 130 GLN 130 A ILE 131 n 131 ILE 131 A ALA 132 n 132 ALA 132 A HIS 133 n 133 HIS 133 A ALA 134 n 134 ALA 134 A ALA 135 n 135 ALA 135 A GLY 136 n 136 GLY 136 A LEU 137 n 137 LEU 137 A VAL 138 n 138 VAL 138 A HIS 139 n 139 HIS 139 A ARG 140 n 140 ARG 140 A ASP 141 n 141 ASP 141 A VAL 142 n 142 VAL 142 A LYS 143 n 143 LYS 143 A PRO 144 n 144 PRO 144 A GLY 145 n 145 GLY 145 A ASN 146 n 146 ASN 146 A ILE 147 n 147 ILE 147 A LEU 148 n 148 LEU 148 A ILE 149 n 149 ILE 149 A THR 150 n 150 THR 150 A PRO 151 n 151 PRO 151 A THR 152 n 152 THR 152 A GLY 153 n 153 GLY 153 A GLN 154 n 154 GLN 154 A VAL 155 n 155 VAL 155 A LYS 156 n 156 LYS 156 A ILE 157 n 157 ILE 157 A THR 158 n 158 THR 158 A ASP 159 n 159 ASP 159 A PHE 160 n 160 PHE 160 A GLY 161 n 161 GLY 161 A ILE 162 n 162 ILE 162 A ALA 163 n 163 ALA 163 A LYS 164 n 164 LYS 164 A ALA 165 n 165 ALA 165 A VAL 166 n 166 VAL 166 A ASP 167 n 167 ASP 167 A ALA 168 n 168 ALA 168 A ALA 169 n 169 ALA 169 A PRO 170 n 170 PRO 170 A VAL 171 n 171 VAL 171 A THR 172 n 172 THR 172 A GLN 173 n 173 GLN 173 A THR 174 n 174 THR 174 A GLY 175 n 175 GLY 175 A MET 176 n 176 MET 176 A VAL 177 n 177 VAL 177 A MET 178 n 178 MET 178 A GLY 179 n 179 GLY 179 A THR 180 n 180 THR 180 A ALA 181 n 181 ALA 181 A GLN 182 n 182 GLN 182 A TYR 183 n 183 TYR 183 A ILE 184 n 184 ILE 184 A ALA 185 n 185 ALA 185 A PRO 186 n 186 PRO 186 A GLU 187 n 187 GLU 187 A GLN 188 n 188 GLN 188 A ALA 189 n 189 ALA 189 A LEU 190 n 190 LEU 190 A GLY 191 n 191 GLY 191 A HIS 192 n 192 HIS 192 A ASP 193 n 193 ASP 193 A ALA 194 n 194 ALA 194 A SER 195 n 195 SER 195 A PRO 196 n 196 PRO 196 A ALA 197 n 197 ALA 197 A SER 198 n 198 SER 198 A ASP 199 n 199 ASP 199 A VAL 200 n 200 VAL 200 A TYR 201 n 201 TYR 201 A SER 202 n 202 SER 202 A LEU 203 n 203 LEU 203 A GLY 204 n 204 GLY 204 A VAL 205 n 205 VAL 205 A VAL 206 n 206 VAL 206 A GLY 207 n 207 GLY 207 A TYR 208 n 208 TYR 208 A GLU 209 n 209 GLU 209 A ALA 210 n 210 ALA 210 A VAL 211 n 211 VAL 211 A SER 212 n 212 SER 212 A GLY 213 n 213 GLY 213 A LYS 214 n 214 LYS 214 A ARG 215 n 215 ARG 215 A PRO 216 n 216 PRO 216 A PHE 217 n 217 PHE 217 A ALA 218 n 218 ALA 218 A GLY 219 n 219 GLY 219 A ASP 220 n 220 ASP 220 A GLY 221 n 221 GLY 221 A ALA 222 n 222 ALA 222 A LEU 223 n 223 LEU 223 A THR 224 n 224 THR 224 A VAL 225 n 225 VAL 225 A ALA 226 n 226 ALA 226 A MET 227 n 227 MET 227 A LYS 228 n 228 LYS 228 A HIS 229 n 229 HIS 229 A ILE 230 n 230 ILE 230 A LYS 231 n 231 LYS 231 A GLU 232 n 232 GLU 232 A PRO 233 n 233 PRO 233 A PRO 234 n 234 PRO 234 A PRO 235 n 235 PRO 235 A PRO 236 n 236 PRO 236 A LEU 237 n 237 LEU 237 A PRO 238 n 238 PRO 238 A PRO 239 n 239 PRO 239 A ASP 240 n 240 ASP 240 A LEU 241 n 241 LEU 241 A PRO 242 n 242 PRO 242 A PRO 243 n 243 PRO 243 A ASN 244 n 244 ASN 244 A VAL 245 n 245 VAL 245 A ARG 246 n 246 ARG 246 A GLU 247 n 247 GLU 247 A LEU 248 n 248 LEU 248 A ILE 249 n 249 ILE 249 A GLU 250 n 250 GLU 250 A ILE 251 n 251 ILE 251 A THR 252 n 252 THR 252 A LEU 253 n 253 LEU 253 A VAL 254 n 254 VAL 254 A LYS 255 n 255 LYS 255 A ASN 256 n 256 ASN 256 A PRO 257 n 257 PRO 257 A ALA 258 n 258 ALA 258 A MET 259 n 259 MET 259 A ARG 260 n 260 ARG 260 A TYR 261 n 261 TYR 261 A ARG 262 n 262 ARG 262 A SER 263 n 263 SER 263 A GLY 264 n 264 GLY 264 A GLY 265 n 265 GLY 265 A PRO 266 n 266 PRO 266 A PHE 267 n 267 PHE 267 A ALA 268 n 268 ALA 268 A ASP 269 n 269 ASP 269 A ALA 270 n 270 ALA 270 A VAL 271 n 271 VAL 271 A ALA 272 n 272 ALA 272 A ALA 273 n 273 ALA 273 A VAL 274 n 274 VAL 274 A ARG 275 n 275 ARG 275 A ALA 276 n 276 ALA 276 A GLY 277 n 277 GLY 277 A ARG 278 n 278 ARG 278 A ARG 279 n 279 ARG 279 A PRO 280 n 280 PRO 280 A PRO 281 n 281 PRO 281 A ARG 282 n 282 ARG 282 A PRO 283 n 283 PRO 283 A software_defined_assembly PISA 2 dimeric 2350 -44 23610 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 2_554 -x,y,-z-1 crystal symmetry operation 8.5175851865 0.0000000000 -78.4057040756 A N LEU 9 A N LEU 9 A O TYR 13 A O TYR 13 A N GLN 16 A N GLN 16 A O GLU 29 A O GLU 29 A N ASP 32 A N ASP 32 A O ARG 37 A O ARG 37 A N ALA 40 A N ALA 40 A O MET 95 A O MET 95 A O VAL 94 A O VAL 94 A N ASP 78 A N ASP 78 A N GLU 101 A N GLU 101 A O ILE 149 A O ILE 149 A N LEU 148 A N LEU 148 A O LYS 156 A O LYS 156 1 A SO4 302 C SO4 1 A HOH 421 D HOH 1 A NE ARG 4 A NE ARG 4 1 Y 1 A CZ ARG 4 A CZ ARG 4 1 Y 1 A NH1 ARG 4 A NH1 ARG 4 1 Y 1 A NH2 ARG 4 A NH2 ARG 4 1 Y 1 A CG ARG 37 A CG ARG 37 1 Y 1 A CD ARG 37 A CD ARG 37 1 Y 1 A NE ARG 37 A NE ARG 37 1 Y 1 A CZ ARG 37 A CZ ARG 37 1 Y 1 A NH1 ARG 37 A NH1 ARG 37 1 Y 1 A NH2 ARG 37 A NH2 ARG 37 1 Y 1 A CD ARG 38 A CD ARG 38 1 Y 1 A NE ARG 38 A NE ARG 38 1 Y 1 A CZ ARG 38 A CZ ARG 38 1 Y 1 A NH1 ARG 38 A NH1 ARG 38 1 Y 1 A NH2 ARG 38 A NH2 ARG 38 1 Y 1 A CG GLU 53 A CG GLU 53 1 Y 1 A CD GLU 53 A CD GLU 53 1 Y 1 A OE1 GLU 53 A OE1 GLU 53 1 Y 1 A OE2 GLU 53 A OE2 GLU 53 1 Y 1 A CG GLU 56 A CG GLU 56 1 Y 1 A CD GLU 56 A CD GLU 56 1 Y 1 A OE1 GLU 56 A OE1 GLU 56 1 Y 1 A OE2 GLU 56 A OE2 GLU 56 1 Y 1 A CG GLN 83 A CG GLN 83 1 Y 1 A CD GLN 83 A CD GLN 83 1 Y 1 A OE1 GLN 83 A OE1 GLN 83 1 Y 1 A NE2 GLN 83 A NE2 GLN 83 1 Y 1 A CG ARG 89 A CG ARG 89 1 Y 1 A CD ARG 89 A CD ARG 89 1 Y 1 A NE ARG 89 A NE ARG 89 1 Y 1 A CZ ARG 89 A CZ ARG 89 1 Y 1 A NH1 ARG 89 A NH1 ARG 89 1 Y 1 A NH2 ARG 89 A NH2 ARG 89 1 Y 1 A OG1 THR 90 A OG1 THR 90 1 Y 1 A CG2 THR 90 A CG2 THR 90 1 Y 1 A CZ ARG 140 A CZ ARG 140 1 Y 1 A NH1 ARG 140 A NH1 ARG 140 1 Y 1 A NH2 ARG 140 A NH2 ARG 140 1 Y 1 A CG MET 176 A CG MET 176 1 Y 1 A SD MET 176 A SD MET 176 1 Y 1 A CE MET 176 A CE MET 176 1 Y 1 A CB MET 178 A CB MET 178 1 Y 1 A CG MET 178 A CG MET 178 1 Y 1 A SD MET 178 A SD MET 178 1 Y 1 A CE MET 178 A CE MET 178 1 Y 1 A CD GLU 247 A CD GLU 247 1 Y 1 A OE1 GLU 247 A OE1 GLU 247 1 Y 1 A OE2 GLU 247 A OE2 GLU 247 1 Y 1 A CD ARG 279 A CD ARG 279 1 Y 1 A NE ARG 279 A NE ARG 279 1 Y 1 A CZ ARG 279 A CZ ARG 279 1 Y 1 A NH1 ARG 279 A NH1 ARG 279 1 Y 1 A NH2 ARG 279 A NH2 ARG 279 1 Y 1 A MET 1 A MET 1 1 Y 1 A SER 2 A SER 2 1 Y 1 A MET 84 A MET 84 1 Y 1 A ASN 85 A ASN 85 1 Y 1 A GLY 86 A GLY 86 1 Y 1 A GLU 87 A GLU 87 1 Y 1 A GLY 88 A GLY 88 1 Y 1 A A OH O TYR PRO 208 235 2.15 1 A ARG 140 75.32 -8.29 1 A ASP 141 -142.25 46.05 23.410 -0.16 0.00 0.99 0.15 0.00 -0.20 0.906 0.868 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.27490 0.22601 0.22846 2.03 46.84 791 15124 5.0 99.82 6.247 0.171 RANDOM 46.84 2.03 1 THROUGHOUT MOLECULAR REPLACEMENT 0.266 0.213 0.80 0.80 1.20 1O6Y MAXIMUM LIKELIHOOD MASK 2.03 46.84 86 2134 11 0 2037 0.009 0.019 2089 0.001 0.020 2040 1.380 1.985 2842 0.792 3.000 4679 6.225 5.000 274 29.027 22.597 77 16.706 15.000 323 20.310 15.000 18 0.076 0.200 327 0.007 0.021 2366 0.001 0.020 446 1.328 2.317 1102 1.328 2.316 1101 2.146 3.464 1374 2.145 3.465 1375 1.258 2.449 987 1.251 2.448 983 2.033 3.617 1463 3.640 18.062 2345 3.636 18.061 2345 0.331 0.348 2.083 54 1127 20 97.68 19.1 2.03 46.84 4OW8 15916 15916 -3.0 0.057 1 22.9 6.0 99.8 2.03 2.14 10.3 0.238 1 5.4 98.8 data scaling XDS refinement REFMAC 5.8.0049 data scaling SCALA phasing PHASER Crystal structure of kinase domain of PknA from Mtb 1 N N 2 N N 3 N N 4 N N A LYS 45 A LYS 45 HELX_P A SER 50 A SER 50 1 AA1 6 A ASP 51 A ASP 51 HELX_P A ALA 66 A ALA 66 1 AA2 16 A LEU 103 A LEU 103 HELX_P A GLY 111 A GLY 111 1 AA3 9 A SER 114 A SER 114 HELX_P A ALA 135 A ALA 135 1 AA4 22 A LYS 143 A LYS 143 HELX_P A GLY 145 A GLY 145 5 AA5 3 A ILE 162 A ILE 162 HELX_P A VAL 166 A VAL 166 5 AA6 5 A PRO 170 A PRO 170 HELX_P A GLY 175 A GLY 175 1 AA7 6 A ALA 185 A ALA 185 HELX_P A LEU 190 A LEU 190 1 AA8 6 A SER 195 A SER 195 HELX_P A GLY 213 A GLY 213 1 AA9 19 A GLY 221 A GLY 221 HELX_P A GLU 232 A GLU 232 1 AB1 12 A PRO 242 A PRO 242 HELX_P A LEU 253 A LEU 253 1 AB2 12 A ASN 256 A ASN 256 HELX_P A ARG 260 A ARG 260 5 AB3 5 A SER 263 A SER 263 HELX_P A ALA 276 A ALA 276 1 AB4 14 TRANSFERASE PknA, kinase, drug target, Mtb, TRANSFERASE PKNA_MYCTU UNP 1 1 P65726 MSPRVGVTLSGRYRLQRLIATGGMGQVWEAVDNRLGRRVAVKVLKSEFSSDPEFIERFRAEARTTAMLNHPGIASVHDYG ESQMNGEGRTAYLVMELVNGEPLNSVLKRTGRLSLRHALDMLEQTGRALQIAHAAGLVHRDVKPGNILITPTGQVKITDF GIAKAVDAAPVTQTGMVMGTAQYIAPEQALGHDASPASDVYSLGVVGYEAVSGKRPFAGDGALTVAMKHIKEPPPPLPPD LPPNVRELIEITLVKNPAMRYRSGGPFADAVAAVRAGRRPPRP 1 283 4OW8 1 283 P65726 A 1 1 283 6 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A THR 8 A THR 8 A LEU 9 A LEU 9 A TYR 13 A TYR 13 A ALA 20 A ALA 20 A GLY 25 A GLY 25 A ASP 32 A ASP 32 A ARG 37 A ARG 37 A LEU 44 A LEU 44 A THR 90 A THR 90 A MET 95 A MET 95 A VAL 76 A VAL 76 A SER 82 A SER 82 A GLU 101 A GLU 101 A PRO 102 A PRO 102 A ILE 147 A ILE 147 A ILE 149 A ILE 149 A VAL 155 A VAL 155 A ILE 157 A ILE 157 binding site for residue GOL A 301 A GOL 301 Software 6 binding site for residue SO4 A 302 A SO4 302 Software 6 A ARG 59 A ARG 59 6 1_555 A ALA 62 A ALA 62 6 1_555 A ARG 63 A ARG 63 6 1_555 A ALA 66 A ALA 66 6 1_555 A VAL 76 A VAL 76 6 1_555 A TYR 79 A TYR 79 6 1_555 A SER 114 A SER 114 6 1_555 A SER 114 A SER 114 6 2_554 A ARG 116 A ARG 116 6 2_554 A ARG 116 A ARG 116 6 1_555 A HIS 117 A HIS 117 6 1_555 A HIS 117 A HIS 117 6 2_554 5 I 1 2 1