0.010574
0.006105
0.000000
-0.000000
0.012210
0.000000
0.000000
-0.000000
0.011652
0.000000
0.000000
0.000000
Tempel, W.
Lam, R.
Zeng, H.
Walker, J.R.
Loppnau, P.
Bountra, C.
Arrowsmith, C.H.
Edwards, A.M.
Min, J.
Wu, H.
Structural Genomics Consortium (SGC)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.000
90.000
120.000
94.568
94.568
85.825
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
UNKNOWN ATOM OR ION
non-polymer
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
S
P
N
6
N
O
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
C
N
11
R
C
N
12
N
O
N
13
S
C
N
14
N
O
N
15
R
C
N
16
N
O
N
17
R
C
Y
18
N
N
Y
19
N
C
Y
20
N
N
Y
21
N
C
Y
22
N
C
N
23
N
N
Y
24
N
N
Y
25
N
C
Y
26
N
N
Y
27
N
C
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
O
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
C
N
62
N
C
N
63
N
N
N
64
N
C
N
65
N
N
N
66
N
N
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
N
N
84
S
C
N
85
N
C
N
86
N
O
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
R
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
S
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
N
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
S
C
N
152
N
C
N
153
N
O
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
O
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
Y
184
N
C
Y
185
N
N
Y
186
N
C
Y
187
N
C
Y
188
N
N
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
S
C
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
N
N
226
S
C
N
227
N
C
N
228
N
O
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
N
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
N
C
N
277
N
C
N
278
N
S
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
MG
N
293
N
N
N
294
S
C
N
295
N
C
N
296
N
O
N
297
N
C
Y
298
N
C
Y
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
N
304
N
O
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
N
N
317
S
C
N
318
N
C
N
319
N
O
N
320
N
C
N
321
N
C
N
322
N
C
N
323
N
O
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
N
N
334
S
C
N
335
N
C
N
336
N
O
N
337
N
C
N
338
N
O
N
339
N
O
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
N
N
348
S
C
N
349
N
C
N
350
N
O
N
351
R
C
N
352
N
O
N
353
N
C
N
354
N
O
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
N
N
365
S
C
N
366
N
C
N
367
N
O
N
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
C
N
375
N
O
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
N
N
389
S
C
N
390
N
C
N
391
N
O
N
392
N
C
N
393
N
C
N
394
N
C
N
395
N
O
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
Y
30
N
sing
Y
31
N
sing
Y
32
N
doub
N
33
N
sing
Y
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
doub
N
39
N
sing
N
40
N
sing
Y
41
N
sing
Y
42
N
doub
N
43
N
sing
Y
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
Y
184
N
sing
Y
185
N
doub
Y
186
N
doub
N
187
N
sing
Y
188
N
sing
N
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
Y
292
N
doub
Y
293
N
sing
Y
294
N
sing
N
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
doub
N
299
N
sing
Y
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
Y
361
N
doub
Y
362
N
sing
Y
363
N
sing
N
364
N
sing
Y
365
N
doub
N
366
N
sing
Y
367
N
doub
N
368
N
sing
Y
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
US
Acta Crystallogr.,Sect.F
ACSFEN
2053-230X
71
981
985
10.1107/S2053230X15010183
26249686
Structure of the human MLH1 N-terminus: implications for predisposition to Lynch syndrome.
2015
10.2210/pdb4p7a/pdb
pdb_00004p7a
100
1
CCD
2010-04-14
ADSC QUANTUM 315
SINGLE WAVELENGTH
M
x-ray
1
0.9793
1.0
19-ID
APS
0.9793
SYNCHROTRON
APS BEAMLINE 19-ID
38655.008
DNA mismatch repair protein Mlh1
1
man
polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
UNKNOWN ATOM OR ION
9
syn
non-polymer
18.015
water
35
nat
water
MutL protein homolog 1
no
no
GMSFVAGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCER
FTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNI
ATRRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLA
FKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHE
ESILERVQQHIESKLLGSNSSRMYFTQT
GMSFVAGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCER
FTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNI
ATRRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLA
FKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHE
ESILERVQQHIESKLLGSNSSRMYFTQT
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
348
MLH1, COCA2
9606
Homo sapiens
469008
Escherichia coli
BL21-(DE3)-V2R-PRARE2
plasmid
Biological sequence
PET28-MHL
1
2.87
57.08
VAPOR DIFFUSION, SITTING DROP
7.5
20% PEG4000, 10% ISOPROPANOL, 0.1 M HEPES
293
Structural Genomics Consortium
SGC
atom_site
pdbx_struct_oper_list
pdbx_unobs_or_zero_occ_atoms
pdbx_unobs_or_zero_occ_residues
pdbx_validate_torsion
software
struct_keywords
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
repository
Initial release
Other
Database references
Advisory
Atomic model
Data collection
Derived calculations
Refinement description
Structure summary
Data collection
Database references
Derived calculations
1
0
2014-04-09
1
1
2014-11-12
1
2
2015-12-16
2
0
2019-07-17
2
1
2023-12-27
_atom_site.pdbx_PDB_model_num
_pdbx_struct_oper_list.symmetry_operation
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_validate_torsion.PDB_model_num
_software.classification
_software.name
_software.version
_struct_keywords.pdbx_keywords
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr2_auth_seq_id
2014-11-12
SPRSDE
This entry is a re-interpretation of the data underlying entry 3NA3.
Y
RCSB
Y
RCSB
2014-03-26
REL
REL
MG
MAGNESIUM ION
ADP
ADENOSINE-5'-DIPHOSPHATE
UNX
UNKNOWN ATOM OR ION
HOH
water
MG
1
2
MG
MG
401
A
ADP
500
3
ADP
ADP
402
A
UNX
1
4
UNX
UNX
403
A
UNX
2
4
UNX
UNX
404
A
UNX
5
4
UNX
UNX
405
A
UNX
7
4
UNX
UNX
406
A
UNX
8
4
UNX
UNX
407
A
UNX
9
4
UNX
UNX
408
A
UNX
10
4
UNX
UNX
409
A
UNX
11
4
UNX
UNX
410
A
UNX
12
4
UNX
UNX
411
A
HOH
386
5
HOH
HOH
501
A
HOH
385
5
HOH
HOH
502
A
HOH
361
5
HOH
HOH
503
A
HOH
383
5
HOH
HOH
504
A
HOH
371
5
HOH
HOH
505
A
HOH
384
5
HOH
HOH
506
A
HOH
380
5
HOH
HOH
507
A
HOH
370
5
HOH
HOH
508
A
HOH
5
5
HOH
HOH
509
A
HOH
1
5
HOH
HOH
510
A
HOH
2
5
HOH
HOH
511
A
HOH
3
5
HOH
HOH
512
A
HOH
4
5
HOH
HOH
513
A
HOH
6
5
HOH
HOH
514
A
HOH
7
5
HOH
HOH
515
A
HOH
8
5
HOH
HOH
516
A
HOH
348
5
HOH
HOH
517
A
HOH
349
5
HOH
HOH
518
A
HOH
350
5
HOH
HOH
519
A
HOH
352
5
HOH
HOH
520
A
HOH
355
5
HOH
HOH
521
A
HOH
357
5
HOH
HOH
522
A
HOH
358
5
HOH
HOH
523
A
HOH
359
5
HOH
HOH
524
A
HOH
362
5
HOH
HOH
525
A
HOH
363
5
HOH
HOH
526
A
HOH
364
5
HOH
HOH
527
A
HOH
365
5
HOH
HOH
528
A
HOH
366
5
HOH
HOH
529
A
HOH
367
5
HOH
HOH
530
A
HOH
369
5
HOH
HOH
531
A
HOH
376
5
HOH
HOH
532
A
HOH
377
5
HOH
HOH
533
A
HOH
379
5
HOH
HOH
534
A
HOH
382
5
HOH
HOH
535
A
n
1
0
A
n
2
1
A
n
3
2
A
PHE
3
n
4
PHE
3
A
VAL
4
n
5
VAL
4
A
ALA
5
n
6
ALA
5
A
GLY
6
n
7
GLY
6
A
VAL
7
n
8
VAL
7
A
ILE
8
n
9
ILE
8
A
ARG
9
n
10
ARG
9
A
ARG
10
n
11
ARG
10
A
LEU
11
n
12
LEU
11
A
ASP
12
n
13
ASP
12
A
GLU
13
n
14
GLU
13
A
THR
14
n
15
THR
14
A
VAL
15
n
16
VAL
15
A
VAL
16
n
17
VAL
16
A
ASN
17
n
18
ASN
17
A
ARG
18
n
19
ARG
18
A
ILE
19
n
20
ILE
19
A
ALA
20
n
21
ALA
20
A
ALA
21
n
22
ALA
21
A
GLY
22
n
23
GLY
22
A
GLU
23
n
24
GLU
23
A
VAL
24
n
25
VAL
24
A
ILE
25
n
26
ILE
25
A
GLN
26
n
27
GLN
26
A
ARG
27
n
28
ARG
27
A
PRO
28
n
29
PRO
28
A
ALA
29
n
30
ALA
29
A
ASN
30
n
31
ASN
30
A
ALA
31
n
32
ALA
31
A
ILE
32
n
33
ILE
32
A
LYS
33
n
34
LYS
33
A
GLU
34
n
35
GLU
34
A
MET
35
n
36
MET
35
A
ILE
36
n
37
ILE
36
A
GLU
37
n
38
GLU
37
A
ASN
38
n
39
ASN
38
A
CYS
39
n
40
CYS
39
A
LEU
40
n
41
LEU
40
A
ASP
41
n
42
ASP
41
A
ALA
42
n
43
ALA
42
A
LYS
43
n
44
LYS
43
A
SER
44
n
45
SER
44
A
THR
45
n
46
THR
45
A
SER
46
n
47
SER
46
A
ILE
47
n
48
ILE
47
A
GLN
48
n
49
GLN
48
A
VAL
49
n
50
VAL
49
A
ILE
50
n
51
ILE
50
A
VAL
51
n
52
VAL
51
A
LYS
52
n
53
LYS
52
A
GLU
53
n
54
GLU
53
A
GLY
54
n
55
GLY
54
A
GLY
55
n
56
GLY
55
A
LEU
56
n
57
LEU
56
A
LYS
57
n
58
LYS
57
A
LEU
58
n
59
LEU
58
A
ILE
59
n
60
ILE
59
A
GLN
60
n
61
GLN
60
A
ILE
61
n
62
ILE
61
A
GLN
62
n
63
GLN
62
A
ASP
63
n
64
ASP
63
A
ASN
64
n
65
ASN
64
A
GLY
65
n
66
GLY
65
A
THR
66
n
67
THR
66
A
GLY
67
n
68
GLY
67
A
ILE
68
n
69
ILE
68
A
ARG
69
n
70
ARG
69
A
LYS
70
n
71
LYS
70
A
GLU
71
n
72
GLU
71
A
ASP
72
n
73
ASP
72
A
LEU
73
n
74
LEU
73
A
ASP
74
n
75
ASP
74
A
ILE
75
n
76
ILE
75
A
VAL
76
n
77
VAL
76
A
CYS
77
n
78
CYS
77
A
GLU
78
n
79
GLU
78
A
ARG
79
n
80
ARG
79
A
PHE
80
n
81
PHE
80
A
THR
81
n
82
THR
81
A
THR
82
n
83
THR
82
A
SER
83
n
84
SER
83
A
LYS
84
n
85
LYS
84
A
LEU
85
n
86
LEU
85
A
n
87
86
A
n
88
87
A
n
89
88
A
n
90
89
A
n
91
90
A
n
92
91
A
n
93
92
A
n
94
93
A
n
95
94
A
n
96
95
A
n
97
96
A
n
98
97
A
GLY
98
n
99
GLY
98
A
PHE
99
n
100
PHE
99
A
ARG
100
n
101
ARG
100
A
GLY
101
n
102
GLY
101
A
GLU
102
n
103
GLU
102
A
ALA
103
n
104
ALA
103
A
LEU
104
n
105
LEU
104
A
ALA
105
n
106
ALA
105
A
SER
106
n
107
SER
106
A
ILE
107
n
108
ILE
107
A
SER
108
n
109
SER
108
A
HIS
109
n
110
HIS
109
A
VAL
110
n
111
VAL
110
A
ALA
111
n
112
ALA
111
A
HIS
112
n
113
HIS
112
A
VAL
113
n
114
VAL
113
A
THR
114
n
115
THR
114
A
ILE
115
n
116
ILE
115
A
THR
116
n
117
THR
116
A
THR
117
n
118
THR
117
A
LYS
118
n
119
LYS
118
A
THR
119
n
120
THR
119
A
ALA
120
n
121
ALA
120
A
ASP
121
n
122
ASP
121
A
GLY
122
n
123
GLY
122
A
LYS
123
n
124
LYS
123
A
CYS
124
n
125
CYS
124
A
ALA
125
n
126
ALA
125
A
TYR
126
n
127
TYR
126
A
ARG
127
n
128
ARG
127
A
ALA
128
n
129
ALA
128
A
SER
129
n
130
SER
129
A
TYR
130
n
131
TYR
130
A
SER
131
n
132
SER
131
A
ASP
132
n
133
ASP
132
A
GLY
133
n
134
GLY
133
A
LYS
134
n
135
LYS
134
A
LEU
135
n
136
LEU
135
A
LYS
136
n
137
LYS
136
A
ALA
137
n
138
ALA
137
A
PRO
138
n
139
PRO
138
A
PRO
139
n
140
PRO
139
A
LYS
140
n
141
LYS
140
A
PRO
141
n
142
PRO
141
A
CYS
142
n
143
CYS
142
A
ALA
143
n
144
ALA
143
A
GLY
144
n
145
GLY
144
A
ASN
145
n
146
ASN
145
A
GLN
146
n
147
GLN
146
A
GLY
147
n
148
GLY
147
A
THR
148
n
149
THR
148
A
GLN
149
n
150
GLN
149
A
ILE
150
n
151
ILE
150
A
THR
151
n
152
THR
151
A
VAL
152
n
153
VAL
152
A
GLU
153
n
154
GLU
153
A
ASP
154
n
155
ASP
154
A
LEU
155
n
156
LEU
155
A
PHE
156
n
157
PHE
156
A
TYR
157
n
158
TYR
157
A
ASN
158
n
159
ASN
158
A
ILE
159
n
160
ILE
159
A
ALA
160
n
161
ALA
160
A
THR
161
n
162
THR
161
A
ARG
162
n
163
ARG
162
A
ARG
163
n
164
ARG
163
A
LYS
164
n
165
LYS
164
A
ALA
165
n
166
ALA
165
A
LEU
166
n
167
LEU
166
A
LYS
167
n
168
LYS
167
A
ASN
168
n
169
ASN
168
A
PRO
169
n
170
PRO
169
A
SER
170
n
171
SER
170
A
GLU
171
n
172
GLU
171
A
GLU
172
n
173
GLU
172
A
TYR
173
n
174
TYR
173
A
GLY
174
n
175
GLY
174
A
LYS
175
n
176
LYS
175
A
ILE
176
n
177
ILE
176
A
LEU
177
n
178
LEU
177
A
GLU
178
n
179
GLU
178
A
VAL
179
n
180
VAL
179
A
VAL
180
n
181
VAL
180
A
GLY
181
n
182
GLY
181
A
ARG
182
n
183
ARG
182
A
TYR
183
n
184
TYR
183
A
SER
184
n
185
SER
184
A
VAL
185
n
186
VAL
185
A
HIS
186
n
187
HIS
186
A
ASN
187
n
188
ASN
187
A
ALA
188
n
189
ALA
188
A
GLY
189
n
190
GLY
189
A
ILE
190
n
191
ILE
190
A
SER
191
n
192
SER
191
A
PHE
192
n
193
PHE
192
A
SER
193
n
194
SER
193
A
VAL
194
n
195
VAL
194
A
LYS
195
n
196
LYS
195
A
LYS
196
n
197
LYS
196
A
GLN
197
n
198
GLN
197
A
GLY
198
n
199
GLY
198
A
GLU
199
n
200
GLU
199
A
THR
200
n
201
THR
200
A
VAL
201
n
202
VAL
201
A
ALA
202
n
203
ALA
202
A
ASP
203
n
204
ASP
203
A
VAL
204
n
205
VAL
204
A
ARG
205
n
206
ARG
205
A
THR
206
n
207
THR
206
A
LEU
207
n
208
LEU
207
A
PRO
208
n
209
PRO
208
A
ASN
209
n
210
ASN
209
A
ALA
210
n
211
ALA
210
A
SER
211
n
212
SER
211
A
THR
212
n
213
THR
212
A
VAL
213
n
214
VAL
213
A
ASP
214
n
215
ASP
214
A
ASN
215
n
216
ASN
215
A
ILE
216
n
217
ILE
216
A
ARG
217
n
218
ARG
217
A
SER
218
n
219
SER
218
A
ILE
219
n
220
ILE
219
A
PHE
220
n
221
PHE
220
A
GLY
221
n
222
GLY
221
A
ASN
222
n
223
ASN
222
A
ALA
223
n
224
ALA
223
A
VAL
224
n
225
VAL
224
A
SER
225
n
226
SER
225
A
ARG
226
n
227
ARG
226
A
GLU
227
n
228
GLU
227
A
LEU
228
n
229
LEU
228
A
ILE
229
n
230
ILE
229
A
GLU
230
n
231
GLU
230
A
ILE
231
n
232
ILE
231
A
GLY
232
n
233
GLY
232
A
CYS
233
n
234
CYS
233
A
GLU
234
n
235
GLU
234
A
ASP
235
n
236
ASP
235
A
LYS
236
n
237
LYS
236
A
THR
237
n
238
THR
237
A
LEU
238
n
239
LEU
238
A
ALA
239
n
240
ALA
239
A
PHE
240
n
241
PHE
240
A
LYS
241
n
242
LYS
241
A
MET
242
n
243
MET
242
A
ASN
243
n
244
ASN
243
A
GLY
244
n
245
GLY
244
A
TYR
245
n
246
TYR
245
A
ILE
246
n
247
ILE
246
A
SER
247
n
248
SER
247
A
ASN
248
n
249
ASN
248
A
ALA
249
n
250
ALA
249
A
ASN
250
n
251
ASN
250
A
TYR
251
n
252
TYR
251
A
SER
252
n
253
SER
252
A
VAL
253
n
254
VAL
253
A
LYS
254
n
255
LYS
254
A
LYS
255
n
256
LYS
255
A
CYS
256
n
257
CYS
256
A
ILE
257
n
258
ILE
257
A
PHE
258
n
259
PHE
258
A
LEU
259
n
260
LEU
259
A
LEU
260
n
261
LEU
260
A
PHE
261
n
262
PHE
261
A
ILE
262
n
263
ILE
262
A
ASN
263
n
264
ASN
263
A
HIS
264
n
265
HIS
264
A
ARG
265
n
266
ARG
265
A
LEU
266
n
267
LEU
266
A
VAL
267
n
268
VAL
267
A
GLU
268
n
269
GLU
268
A
SER
269
n
270
SER
269
A
THR
270
n
271
THR
270
A
SER
271
n
272
SER
271
A
LEU
272
n
273
LEU
272
A
ARG
273
n
274
ARG
273
A
LYS
274
n
275
LYS
274
A
ALA
275
n
276
ALA
275
A
ILE
276
n
277
ILE
276
A
GLU
277
n
278
GLU
277
A
THR
278
n
279
THR
278
A
VAL
279
n
280
VAL
279
A
TYR
280
n
281
TYR
280
A
ALA
281
n
282
ALA
281
A
ALA
282
n
283
ALA
282
A
TYR
283
n
284
TYR
283
A
LEU
284
n
285
LEU
284
A
PRO
285
n
286
PRO
285
A
LYS
286
n
287
LYS
286
A
ASN
287
n
288
ASN
287
A
THR
288
n
289
THR
288
A
HIS
289
n
290
HIS
289
A
PRO
290
n
291
PRO
290
A
PHE
291
n
292
PHE
291
A
LEU
292
n
293
LEU
292
A
TYR
293
n
294
TYR
293
A
LEU
294
n
295
LEU
294
A
SER
295
n
296
SER
295
A
LEU
296
n
297
LEU
296
A
GLU
297
n
298
GLU
297
A
ILE
298
n
299
ILE
298
A
SER
299
n
300
SER
299
A
PRO
300
n
301
PRO
300
A
n
302
301
A
n
303
302
A
n
304
303
A
n
305
304
A
n
306
305
A
n
307
306
A
n
308
307
A
n
309
308
A
n
310
309
A
n
311
310
A
n
312
311
A
n
313
312
A
n
314
313
A
n
315
314
A
n
316
315
A
n
317
316
A
n
318
317
A
n
319
318
A
n
320
319
A
GLU
320
n
321
GLU
320
A
SER
321
n
322
SER
321
A
ILE
322
n
323
ILE
322
A
LEU
323
n
324
LEU
323
A
GLU
324
n
325
GLU
324
A
ARG
325
n
326
ARG
325
A
VAL
326
n
327
VAL
326
A
GLN
327
n
328
GLN
327
A
GLN
328
n
329
GLN
328
A
HIS
329
n
330
HIS
329
A
ILE
330
n
331
ILE
330
A
GLU
331
n
332
GLU
331
A
SER
332
n
333
SER
332
A
LYS
333
n
334
LYS
333
A
LEU
334
n
335
LEU
334
A
LEU
335
n
336
LEU
335
A
GLY
336
n
337
GLY
336
A
n
338
337
A
n
339
338
A
n
340
339
A
n
341
340
A
n
342
341
A
n
343
342
A
n
344
343
A
n
345
344
A
n
346
345
A
n
347
346
A
n
348
347
A
2.0232
-0.3370
1.2098
6.3497
-1.5515
1.0213
0.0221
-0.0804
-0.0357
-0.1388
-0.0573
-0.3475
0.0244
-0.0034
0.0353
0.1838
-0.0310
-0.0393
0.1722
-0.0153
0.1994
refined
35.1370
-56.6788
18.5016
X-RAY DIFFRACTION
3.9262
-0.0340
0.3404
4.3785
-1.1865
3.2874
0.1170
0.0189
-0.1967
0.0611
-0.2644
-0.2492
0.0996
0.2347
0.1474
0.0519
-0.0003
0.0213
0.0262
0.0082
0.1298
refined
26.7544
-20.4770
8.9830
X-RAY DIFFRACTION
3.3020
0.2110
0.8613
5.7493
1.7503
6.9218
-0.1583
0.6624
-0.4640
-0.2720
0.0946
0.0154
0.7350
-0.1302
0.0637
0.3324
-0.0211
-0.1369
0.4644
-0.0924
0.3947
refined
14.8412
-22.4485
-17.1678
X-RAY DIFFRACTION
A
3
A
11
X-RAY DIFFRACTION
1
A
12
A
209
X-RAY DIFFRACTION
2
A
210
A
336
X-RAY DIFFRACTION
3
software_defined_assembly
PISA
2
dimeric
4850
-51
27860
A
ASN
38
A
OD1
ASN
39
1_555
A
MG
401
B
MG
MG
1_555
A
ADP
402
C
O1B
ADP
1_555
93.9
A
ASN
38
A
OD1
ASN
39
1_555
A
MG
401
B
MG
MG
1_555
A
ADP
402
C
O1A
ADP
1_555
97.5
A
ADP
402
C
O1B
ADP
1_555
A
MG
401
B
MG
MG
1_555
A
ADP
402
C
O1A
ADP
1_555
83.2
A
ASN
38
A
OD1
ASN
39
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
510
M
O
HOH
1_555
87.8
A
ADP
402
C
O1B
ADP
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
510
M
O
HOH
1_555
177.3
A
ADP
402
C
O1A
ADP
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
510
M
O
HOH
1_555
98.5
A
ASN
38
A
OD1
ASN
39
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
511
M
O
HOH
1_555
86.2
A
ADP
402
C
O1B
ADP
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
511
M
O
HOH
1_555
87.5
A
ADP
402
C
O1A
ADP
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
511
M
O
HOH
1_555
170.2
A
HOH
510
M
O
HOH
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
511
M
O
HOH
1_555
90.7
A
ASN
38
A
OD1
ASN
39
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
512
M
O
HOH
1_555
173.1
A
ADP
402
C
O1B
ADP
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
512
M
O
HOH
1_555
88.6
A
ADP
402
C
O1A
ADP
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
512
M
O
HOH
1_555
89.2
A
HOH
510
M
O
HOH
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
512
M
O
HOH
1_555
89.4
A
HOH
511
M
O
HOH
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
512
M
O
HOH
1_555
87.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
4_545
-x,-y-1,z
crystal symmetry operation
47.2840000000
-81.8982903851
0.0000000000
A
O
LYS
134
A
O
LYS
135
A
N
SER
131
A
N
SER
132
A
N
ARG
127
A
N
ARG
128
A
O
LYS
140
A
O
LYS
141
A
O
LYS
134
A
O
LYS
135
A
N
SER
131
A
N
SER
132
A
O
ALA
128
A
O
ALA
129
A
N
ILE
115
A
N
ILE
116
A
N
THR
116
A
N
THR
117
A
O
GLN
149
A
O
GLN
150
A
O
VAL
152
A
O
VAL
153
A
N
ILE
59
A
N
ILE
60
A
O
GLN
62
A
O
GLN
63
A
N
GLN
48
A
N
GLN
49
A
N
ILE
47
A
N
ILE
48
A
O
SER
191
A
O
SER
192
A
N
VAL
194
A
N
VAL
195
A
O
VAL
204
A
O
VAL
205
A
N
ILE
229
A
N
ILE
230
A
O
ILE
246
A
O
ILE
247
A
N
ASN
243
A
N
ASN
244
A
O
SER
295
A
O
SER
296
A
O
LEU
296
A
O
LEU
297
A
N
PHE
261
A
N
PHE
262
A
N
ILE
262
A
N
ILE
263
A
O
ARG
265
A
O
ARG
266
1
A
CG
PHE
3
A
CG
PHE
4
1
Y
1
A
CD1
PHE
3
A
CD1
PHE
4
1
Y
1
A
CD2
PHE
3
A
CD2
PHE
4
1
Y
1
A
CE1
PHE
3
A
CE1
PHE
4
1
Y
1
A
CE2
PHE
3
A
CE2
PHE
4
1
Y
1
A
CZ
PHE
3
A
CZ
PHE
4
1
Y
1
A
CG
GLN
26
A
CG
GLN
27
1
Y
1
A
CD
GLN
26
A
CD
GLN
27
1
Y
1
A
OE1
GLN
26
A
OE1
GLN
27
1
Y
1
A
NE2
GLN
26
A
NE2
GLN
27
1
Y
1
A
CE
LYS
43
A
CE
LYS
44
1
Y
1
A
NZ
LYS
43
A
NZ
LYS
44
1
Y
1
A
CE
LYS
52
A
CE
LYS
53
1
Y
1
A
NZ
LYS
52
A
NZ
LYS
53
1
Y
1
A
CG
ASP
121
A
CG
ASP
122
1
Y
1
A
OD1
ASP
121
A
OD1
ASP
122
1
Y
1
A
OD2
ASP
121
A
OD2
ASP
122
1
Y
1
A
CG
LYS
123
A
CG
LYS
124
1
Y
1
A
CD
LYS
123
A
CD
LYS
124
1
Y
1
A
CE
LYS
123
A
CE
LYS
124
1
Y
1
A
NZ
LYS
123
A
NZ
LYS
124
1
Y
1
A
CG
LYS
134
A
CG
LYS
135
1
Y
1
A
CD
LYS
134
A
CD
LYS
135
1
Y
1
A
CE
LYS
134
A
CE
LYS
135
1
Y
1
A
NZ
LYS
134
A
NZ
LYS
135
1
Y
1
A
CE
LYS
140
A
CE
LYS
141
1
Y
1
A
NZ
LYS
140
A
NZ
LYS
141
1
Y
1
A
NE
ARG
163
A
NE
ARG
164
1
Y
1
A
CZ
ARG
163
A
CZ
ARG
164
1
Y
1
A
NH1
ARG
163
A
NH1
ARG
164
1
Y
1
A
NH2
ARG
163
A
NH2
ARG
164
1
Y
1
A
CG
LYS
164
A
CG
LYS
165
1
Y
1
A
CD
LYS
164
A
CD
LYS
165
1
Y
1
A
CE
LYS
164
A
CE
LYS
165
1
Y
1
A
NZ
LYS
164
A
NZ
LYS
165
1
Y
1
A
CD
LYS
167
A
CD
LYS
168
1
Y
1
A
CE
LYS
167
A
CE
LYS
168
1
Y
1
A
NZ
LYS
167
A
NZ
LYS
168
1
Y
1
A
CD
LYS
175
A
CD
LYS
176
1
Y
1
A
CE
LYS
175
A
CE
LYS
176
1
Y
1
A
NZ
LYS
175
A
NZ
LYS
176
1
Y
1
A
NZ
LYS
195
A
NZ
LYS
196
1
Y
1
A
CG
ASN
209
A
CG
ASN
210
1
Y
1
A
OD1
ASN
209
A
OD1
ASN
210
1
Y
1
A
ND2
ASN
209
A
ND2
ASN
210
1
Y
1
A
NE
ARG
217
A
NE
ARG
218
1
Y
1
A
CZ
ARG
217
A
CZ
ARG
218
1
Y
1
A
NH1
ARG
217
A
NH1
ARG
218
1
Y
1
A
NH2
ARG
217
A
NH2
ARG
218
1
Y
1
A
CG
ARG
226
A
CG
ARG
227
1
Y
1
A
CD
ARG
226
A
CD
ARG
227
1
Y
1
A
NE
ARG
226
A
NE
ARG
227
1
Y
1
A
CZ
ARG
226
A
CZ
ARG
227
1
Y
1
A
NH1
ARG
226
A
NH1
ARG
227
1
Y
1
A
NH2
ARG
226
A
NH2
ARG
227
1
Y
1
A
CG
GLU
234
A
CG
GLU
235
1
Y
1
A
CD
GLU
234
A
CD
GLU
235
1
Y
1
A
OE1
GLU
234
A
OE1
GLU
235
1
Y
1
A
OE2
GLU
234
A
OE2
GLU
235
1
Y
1
A
CG
LYS
236
A
CG
LYS
237
1
Y
1
A
CD
LYS
236
A
CD
LYS
237
1
Y
1
A
CE
LYS
236
A
CE
LYS
237
1
Y
1
A
NZ
LYS
236
A
NZ
LYS
237
1
Y
1
A
OG1
THR
237
A
OG1
THR
238
1
Y
1
A
CG2
THR
237
A
CG2
THR
238
1
Y
1
A
CG
LEU
238
A
CG
LEU
239
1
Y
1
A
CD1
LEU
238
A
CD1
LEU
239
1
Y
1
A
CD2
LEU
238
A
CD2
LEU
239
1
Y
1
A
CG
LYS
241
A
CG
LYS
242
1
Y
1
A
CD
LYS
241
A
CD
LYS
242
1
Y
1
A
CE
LYS
241
A
CE
LYS
242
1
Y
1
A
NZ
LYS
241
A
NZ
LYS
242
1
Y
1
A
OD1
ASN
250
A
OD1
ASN
251
1
Y
1
A
ND2
ASN
250
A
ND2
ASN
251
1
Y
1
A
CG
TYR
251
A
CG
TYR
252
1
Y
1
A
CD1
TYR
251
A
CD1
TYR
252
1
Y
1
A
CD2
TYR
251
A
CD2
TYR
252
1
Y
1
A
CE1
TYR
251
A
CE1
TYR
252
1
Y
1
A
CE2
TYR
251
A
CE2
TYR
252
1
Y
1
A
CZ
TYR
251
A
CZ
TYR
252
1
Y
1
A
OH
TYR
251
A
OH
TYR
252
1
Y
1
A
OG
SER
252
A
OG
SER
253
1
Y
1
A
CG
LYS
254
A
CG
LYS
255
1
Y
1
A
CD
LYS
254
A
CD
LYS
255
1
Y
1
A
CE
LYS
254
A
CE
LYS
255
1
Y
1
A
NZ
LYS
254
A
NZ
LYS
255
1
Y
1
A
CG
LYS
255
A
CG
LYS
256
1
Y
1
A
CD
LYS
255
A
CD
LYS
256
1
Y
1
A
CE
LYS
255
A
CE
LYS
256
1
Y
1
A
NZ
LYS
255
A
NZ
LYS
256
1
Y
1
A
CG
GLU
268
A
CG
GLU
269
1
Y
1
A
CD
GLU
268
A
CD
GLU
269
1
Y
1
A
OE1
GLU
268
A
OE1
GLU
269
1
Y
1
A
OE2
GLU
268
A
OE2
GLU
269
1
Y
1
A
OG1
THR
270
A
OG1
THR
271
1
Y
1
A
CG2
THR
270
A
CG2
THR
271
1
Y
1
A
CG
LEU
272
A
CG
LEU
273
1
Y
1
A
CD1
LEU
272
A
CD1
LEU
273
1
Y
1
A
CD2
LEU
272
A
CD2
LEU
273
1
Y
1
A
CG
LYS
274
A
CG
LYS
275
1
Y
1
A
CD
LYS
274
A
CD
LYS
275
1
Y
1
A
CE
LYS
274
A
CE
LYS
275
1
Y
1
A
NZ
LYS
274
A
NZ
LYS
275
1
Y
1
A
CG
GLU
277
A
CG
GLU
278
1
Y
1
A
CD
GLU
277
A
CD
GLU
278
1
Y
1
A
OE1
GLU
277
A
OE1
GLU
278
1
Y
1
A
OE2
GLU
277
A
OE2
GLU
278
1
Y
1
A
CG
LEU
284
A
CG
LEU
285
1
Y
1
A
CD1
LEU
284
A
CD1
LEU
285
1
Y
1
A
CD2
LEU
284
A
CD2
LEU
285
1
Y
1
A
CG
LYS
286
A
CG
LYS
287
1
Y
1
A
CD
LYS
286
A
CD
LYS
287
1
Y
1
A
CE
LYS
286
A
CE
LYS
287
1
Y
1
A
NZ
LYS
286
A
NZ
LYS
287
1
Y
1
A
CG
ASN
287
A
CG
ASN
288
1
Y
1
A
OD1
ASN
287
A
OD1
ASN
288
1
Y
1
A
ND2
ASN
287
A
ND2
ASN
288
1
Y
1
A
CG
GLU
297
A
CG
GLU
298
1
Y
1
A
CD
GLU
297
A
CD
GLU
298
1
Y
1
A
OE1
GLU
297
A
OE1
GLU
298
1
Y
1
A
OE2
GLU
297
A
OE2
GLU
298
1
Y
1
A
OG
SER
299
A
OG
SER
300
1
Y
1
A
CG
GLU
320
A
CG
GLU
321
1
Y
1
A
CD
GLU
320
A
CD
GLU
321
1
Y
1
A
OE1
GLU
320
A
OE1
GLU
321
1
Y
1
A
OE2
GLU
320
A
OE2
GLU
321
1
Y
1
A
OG
SER
321
A
OG
SER
322
1
Y
1
A
CG1
ILE
322
A
CG1
ILE
323
1
Y
1
A
CG2
ILE
322
A
CG2
ILE
323
1
Y
1
A
CD1
ILE
322
A
CD1
ILE
323
1
Y
1
A
CG
LEU
323
A
CG
LEU
324
1
Y
1
A
CD1
LEU
323
A
CD1
LEU
324
1
Y
1
A
CD2
LEU
323
A
CD2
LEU
324
1
Y
1
A
CG
GLU
324
A
CG
GLU
325
1
Y
1
A
CD
GLU
324
A
CD
GLU
325
1
Y
1
A
OE1
GLU
324
A
OE1
GLU
325
1
Y
1
A
OE2
GLU
324
A
OE2
GLU
325
1
Y
1
A
CG
ARG
325
A
CG
ARG
326
1
Y
1
A
CD
ARG
325
A
CD
ARG
326
1
Y
1
A
NE
ARG
325
A
NE
ARG
326
1
Y
1
A
CZ
ARG
325
A
CZ
ARG
326
1
Y
1
A
NH1
ARG
325
A
NH1
ARG
326
1
Y
1
A
NH2
ARG
325
A
NH2
ARG
326
1
Y
1
A
CG1
VAL
326
A
CG1
VAL
327
1
Y
1
A
CG2
VAL
326
A
CG2
VAL
327
1
Y
1
A
CG
GLN
327
A
CG
GLN
328
1
Y
1
A
CD
GLN
327
A
CD
GLN
328
1
Y
1
A
OE1
GLN
327
A
OE1
GLN
328
1
Y
1
A
NE2
GLN
327
A
NE2
GLN
328
1
Y
1
A
CG
GLN
328
A
CG
GLN
329
1
Y
1
A
CD
GLN
328
A
CD
GLN
329
1
Y
1
A
OE1
GLN
328
A
OE1
GLN
329
1
Y
1
A
NE2
GLN
328
A
NE2
GLN
329
1
Y
1
A
NZ
LYS
333
A
NZ
LYS
334
1
Y
1
A
GLY
0
A
GLY
1
1
Y
1
A
MET
1
A
MET
2
1
Y
1
A
SER
2
A
SER
3
1
Y
1
A
GLN
86
A
GLN
87
1
Y
1
A
SER
87
A
SER
88
1
Y
1
A
PHE
88
A
PHE
89
1
Y
1
A
GLU
89
A
GLU
90
1
Y
1
A
ASP
90
A
ASP
91
1
Y
1
A
LEU
91
A
LEU
92
1
Y
1
A
ALA
92
A
ALA
93
1
Y
1
A
SER
93
A
SER
94
1
Y
1
A
ILE
94
A
ILE
95
1
Y
1
A
SER
95
A
SER
96
1
Y
1
A
THR
96
A
THR
97
1
Y
1
A
TYR
97
A
TYR
98
1
Y
1
A
GLN
301
A
GLN
302
1
Y
1
A
ASN
302
A
ASN
303
1
Y
1
A
VAL
303
A
VAL
304
1
Y
1
A
ASP
304
A
ASP
305
1
Y
1
A
VAL
305
A
VAL
306
1
Y
1
A
ASN
306
A
ASN
307
1
Y
1
A
VAL
307
A
VAL
308
1
Y
1
A
HIS
308
A
HIS
309
1
Y
1
A
PRO
309
A
PRO
310
1
Y
1
A
THR
310
A
THR
311
1
Y
1
A
LYS
311
A
LYS
312
1
Y
1
A
HIS
312
A
HIS
313
1
Y
1
A
GLU
313
A
GLU
314
1
Y
1
A
VAL
314
A
VAL
315
1
Y
1
A
HIS
315
A
HIS
316
1
Y
1
A
PHE
316
A
PHE
317
1
Y
1
A
LEU
317
A
LEU
318
1
Y
1
A
HIS
318
A
HIS
319
1
Y
1
A
GLU
319
A
GLU
320
1
Y
1
A
SER
337
A
SER
338
1
Y
1
A
ASN
338
A
ASN
339
1
Y
1
A
SER
339
A
SER
340
1
Y
1
A
SER
340
A
SER
341
1
Y
1
A
ARG
341
A
ARG
342
1
Y
1
A
MET
342
A
MET
343
1
Y
1
A
TYR
343
A
TYR
344
1
Y
1
A
PHE
344
A
PHE
345
1
Y
1
A
THR
345
A
THR
346
1
Y
1
A
GLN
346
A
GLN
347
1
Y
1
A
THR
347
A
THR
348
1
Y
1
A
GLN
26
77.09
-46.53
1
A
ASN
209
A
-113.05
52.27
153.240
65.1682
28.160
0.7400
0.3700
0.0000
0.7400
-0.0000
-2.4000
0.9440
0.8980
This entry is a re-interpretation of the data underlying entry 3NA3. Autobuster was used during intermediate refinement steps. COOT was used for interactive model building. Model geometry was evaluated with MOLPROBITY.
0.2537
0.2026
0.2051
2.3000
40.0000
981
18456
19437
5.0000
99.9000
0.2403
0.1939
1.000
0.400
0.8213
11.4100
0.1530
0.2360
0.2095
RANDOM
1
THROUGHOUT
0.000
0.2360
0.2090
0.8000
0.8000
1.2000
MAXIMUM LIKELIHOOD
MASK
2.3000
40.0000
37
2269
39.86
43.95
37
0
2195
303
0.014
0.019
2284
0.002
0.020
2127
1.414
1.974
3114
0.800
3.000
4852
6.534
5.000
305
36.591
23.810
84
13.307
15.000
348
24.898
15.000
14
0.079
0.200
377
0.006
0.020
2621
0.002
0.020
500
2.991
3.602
1223
2.983
3.600
1222
4.141
5.384
1527
0.2880
0.2820
2.3600
70
1367
1437
20
99.7900
2.300
47.280
4P7A
19468
0.059
0.020
1
27.100
184048
9.500
99.900
1.113
2.300
2.380
2.300
17980
1888
0.382
1
9.500
100.000
refinement
REFMAC
5.8.0069
data scaling
Aimless
0.1.29
refinement
BUSTER
data reduction
XDS
data extraction
PDB_EXTRACT
3.14
Crystal Structure of human MLH1
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
has not been determined as part of this study.
A
ASP
12
A
ASP
13
HELX_P
A
GLN
26
A
GLN
27
1
AA1
15
A
ARG
27
A
ARG
28
HELX_P
A
ALA
42
A
ALA
43
1
AA2
16
A
ARG
69
A
ARG
70
HELX_P
A
LEU
73
A
LEU
74
5
AA3
5
A
GLU
102
A
GLU
103
HELX_P
A
VAL
110
A
VAL
111
1
AA4
9
A
ILE
159
A
ILE
160
HELX_P
A
LEU
166
A
LEU
167
1
AA5
8
A
ASN
168
A
ASN
169
HELX_P
A
ASN
187
A
ASN
188
1
AA6
20
A
SER
211
A
SER
212
HELX_P
A
GLY
221
A
GLY
222
1
AA7
11
A
GLY
221
A
GLY
222
HELX_P
A
ARG
226
A
ARG
227
1
AA8
6
A
SER
269
A
SER
270
HELX_P
A
ALA
282
A
ALA
283
1
AA9
14
A
SER
321
A
SER
322
HELX_P
A
GLY
336
A
GLY
337
1
AB1
16
metalc
2.104
A
ASN
38
A
OD1
ASN
39
1_555
A
MG
401
B
MG
MG
1_555
metalc
2.123
A
MG
401
B
MG
MG
1_555
A
ADP
402
C
O1B
ADP
1_555
metalc
1.981
A
MG
401
B
MG
MG
1_555
A
ADP
402
C
O1A
ADP
1_555
metalc
2.052
A
MG
401
B
MG
MG
1_555
A
HOH
510
M
O
HOH
1_555
metalc
1.906
A
MG
401
B
MG
MG
1_555
A
HOH
511
M
O
HOH
1_555
metalc
2.024
A
MG
401
B
MG
MG
1_555
A
HOH
512
M
O
HOH
1_555
DNA BINDING PROTEIN
structural genomics consortium, DNA MISMATCH REPAIR, DNA DAMAGE, SGC, DNA binding protein
MLH1_HUMAN
UNP
1
1
P40692
MSFVAGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERF
TTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIA
TRRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAF
KMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEE
SILERVQQHIESKLLGSNSSRMYFTQT
1
347
4P7A
1
347
P40692
A
1
2
348
1
expression tag
GLY
0
4P7A
A
P40692
UNP
1
3
8
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
A
LYS
134
A
LYS
135
A
LEU
135
A
LEU
136
A
ALA
125
A
ALA
126
A
SER
131
A
SER
132
A
LYS
140
A
LYS
141
A
CYS
142
A
CYS
143
A
LYS
134
A
LYS
135
A
LEU
135
A
LEU
136
A
ALA
125
A
ALA
126
A
SER
131
A
SER
132
A
HIS
112
A
HIS
113
A
LYS
118
A
LYS
119
A
GLY
147
A
GLY
148
A
GLU
153
A
GLU
154
A
LEU
58
A
LEU
59
A
ASP
63
A
ASP
64
A
SER
46
A
SER
47
A
LYS
52
A
LYS
53
A
SER
191
A
SER
192
A
LYS
196
A
LYS
197
A
VAL
204
A
VAL
205
A
ARG
205
A
ARG
206
A
LEU
228
A
LEU
229
A
ASP
235
A
ASP
236
A
PHE
240
A
PHE
241
A
SER
247
A
SER
248
A
PHE
291
A
PHE
292
A
ILE
298
A
ILE
299
A
ILE
257
A
ILE
258
A
ILE
262
A
ILE
263
A
ARG
265
A
ARG
266
A
LEU
266
A
LEU
267
binding site for residue MG A 401
A
MG
401
Software
5
binding site for residue ADP A 402
A
ADP
402
Software
23
A
ASN
38
A
ASN
39
5
1_555
A
ADP
402
C
ADP
5
1_555
A
HOH
510
M
HOH
5
1_555
A
HOH
511
M
HOH
5
1_555
A
HOH
512
M
HOH
5
1_555
A
ASN
38
A
ASN
39
23
1_555
A
ALA
42
A
ALA
43
23
1_555
A
ASP
63
A
ASP
64
23
1_555
A
GLY
67
A
GLY
68
23
1_555
A
ILE
68
A
ILE
69
23
1_555
A
VAL
76
A
VAL
77
23
1_555
A
THR
81
A
THR
82
23
1_555
A
THR
82
A
THR
83
23
1_555
A
SER
83
A
SER
84
23
1_555
A
LYS
84
A
LYS
85
23
1_555
A
ARG
100
A
ARG
101
23
1_555
A
GLY
101
A
GLY
102
23
1_555
A
ALA
103
A
ALA
104
23
1_555
A
LEU
104
A
LEU
105
23
1_555
A
THR
148
A
THR
149
23
1_555
A
MG
401
B
MG
23
1_555
A
HOH
503
M
HOH
23
1_555
A
HOH
510
M
HOH
23
1_555
A
HOH
511
M
HOH
23
1_555
A
HOH
512
M
HOH
23
1_555
A
HOH
513
M
HOH
23
1_555
A
HOH
517
M
HOH
23
1_555
A
HOH
520
M
HOH
23
1_555
172
P 64