0.018598
0.000000
0.002389
-0.000000
0.017730
0.000000
0.000000
-0.000000
0.016758
0.00000
0.00000
0.00000
Perica, T.
Kondo, Y.
Tiwari, S.
McLaughlin, S.
Steward, A.
Reuter, N.
Clarke, J.
Teichmann, S.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
97.32
90.00
53.770
56.400
60.165
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
S
C
N
153
N
C
N
154
N
O
N
155
N
C
Y
156
N
C
Y
157
N
N
Y
158
N
C
Y
159
N
C
Y
160
N
N
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
S
C
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
N
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
S
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
N
269
N
C
N
270
N
C
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
N
N
282
S
C
N
283
N
C
N
284
N
O
N
285
N
C
N
286
N
O
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
S
N
296
N
O
N
297
N
O
N
298
N
O
N
299
N
O
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
R
C
N
305
N
O
N
306
N
C
N
307
N
O
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
N
N
318
S
C
N
319
N
C
N
320
N
O
N
321
N
C
Y
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
N
328
N
O
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
N
346
N
C
N
347
N
C
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
Y
153
N
sing
Y
154
N
doub
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
Y
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
Y
311
N
doub
Y
312
N
sing
Y
313
N
sing
N
314
N
sing
Y
315
N
doub
N
316
N
sing
Y
317
N
doub
N
318
N
sing
Y
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
doub
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
US
Science
SCIEAS
0038
1095-9203
346
1254346
1254346
10.1126/science.1254346
25525255
Evolution of oligomeric state through allosteric pathways that mimic ligand binding.
2014
10.2210/pdb4p84/pdb
pdb_00004p84
100
1
PIXEL
2013-06-23
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.9795
1.0
I02
Diamond
0.9795
SYNCHROTRON
DIAMOND BEAMLINE I02
20123.975
Bifunctional protein PyrR
2.4.2.9
1
man
polymer
96.063
SULFATE ION
2
syn
non-polymer
92.094
GLYCEROL
2
syn
non-polymer
18.015
water
154
nat
water
PYRIMIDINE OPERON REGULATORY PROTEIN PYRR
no
no
GSNEKAVILDEQAIRRALTRIAHEIIERNKGVDNCVLVGIKTRGIYLAKRLAERIEQIEGKPVPVGEIDITLYRDDLSVT
SNDEPLVKGTDIPVDITDKKVILVDDVLYTGRTVRAGMDALMDLGRPSQIQLAVLVDRGHRELPIRADYVGKNVPTSKSE
RIVVQLDEVDQNDRVSIYEN
GSNEKAVILDEQAIRRALTRIAHEIIERNKGVDNCVLVGIKTRGIYLAKRLAERIEQIEGKPVPVGEIDITLYRDDLSVT
SNDEPLVKGTDIPVDITDKKVILVDDVLYTGRTVRAGMDALMDLGRPSQIQLAVLVDRGHRELPIRADYVGKNVPTSKSE
RIVVQLDEVDQNDRVSIYEN
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
1
180
32630
synthetic construct
469008
Escherichia coli BL21(DE3)
C41
Biological sequence
2.25
45.29
VAPOR DIFFUSION, SITTING DROP
7.0
30% PEG-600, 10% glycerol, 0.1M Tris pH 7.0, 0.5 M (NH4)2SO4
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Database references
Database references
Data collection
Database references
Refinement description
1
0
2014-12-17
1
1
2014-12-24
1
2
2014-12-31
1
3
2023-12-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
N
RCSB
Y
PDBE
2014-03-30
REL
REL
SO4
SULFATE ION
GOL
GLYCEROL
HOH
water
1A3C
PDB
experimental model
SO4
1
2
SO4
SO4
201
A
SO4
2
2
SO4
SO4
202
A
GOL
1
3
GOL
GOL
203
A
GOL
2
3
GOL
GOL
204
A
HOH
135
4
HOH
HOH
301
A
HOH
87
4
HOH
HOH
302
A
HOH
146
4
HOH
HOH
303
A
HOH
112
4
HOH
HOH
304
A
HOH
164
4
HOH
HOH
305
A
HOH
6
4
HOH
HOH
306
A
HOH
92
4
HOH
HOH
307
A
HOH
41
4
HOH
HOH
308
A
HOH
110
4
HOH
HOH
309
A
HOH
145
4
HOH
HOH
310
A
HOH
20
4
HOH
HOH
311
A
HOH
88
4
HOH
HOH
312
A
HOH
12
4
HOH
HOH
313
A
HOH
109
4
HOH
HOH
314
A
HOH
56
4
HOH
HOH
315
A
HOH
11
4
HOH
HOH
316
A
HOH
19
4
HOH
HOH
317
A
HOH
100
4
HOH
HOH
318
A
HOH
16
4
HOH
HOH
319
A
HOH
28
4
HOH
HOH
320
A
HOH
9
4
HOH
HOH
321
A
HOH
83
4
HOH
HOH
322
A
HOH
86
4
HOH
HOH
323
A
HOH
52
4
HOH
HOH
324
A
HOH
44
4
HOH
HOH
325
A
HOH
22
4
HOH
HOH
326
A
HOH
174
4
HOH
HOH
327
A
HOH
7
4
HOH
HOH
328
A
HOH
25
4
HOH
HOH
329
A
HOH
47
4
HOH
HOH
330
A
HOH
31
4
HOH
HOH
331
A
HOH
183
4
HOH
HOH
332
A
HOH
69
4
HOH
HOH
333
A
HOH
80
4
HOH
HOH
334
A
HOH
5
4
HOH
HOH
335
A
HOH
45
4
HOH
HOH
336
A
HOH
10
4
HOH
HOH
337
A
HOH
27
4
HOH
HOH
338
A
HOH
154
4
HOH
HOH
339
A
HOH
46
4
HOH
HOH
340
A
HOH
147
4
HOH
HOH
341
A
HOH
122
4
HOH
HOH
342
A
HOH
107
4
HOH
HOH
343
A
HOH
23
4
HOH
HOH
344
A
HOH
153
4
HOH
HOH
345
A
HOH
2
4
HOH
HOH
346
A
HOH
181
4
HOH
HOH
347
A
HOH
35
4
HOH
HOH
348
A
HOH
108
4
HOH
HOH
349
A
HOH
155
4
HOH
HOH
350
A
HOH
162
4
HOH
HOH
351
A
HOH
49
4
HOH
HOH
352
A
HOH
74
4
HOH
HOH
353
A
HOH
120
4
HOH
HOH
354
A
HOH
39
4
HOH
HOH
355
A
HOH
119
4
HOH
HOH
356
A
HOH
15
4
HOH
HOH
357
A
HOH
66
4
HOH
HOH
358
A
HOH
180
4
HOH
HOH
359
A
HOH
149
4
HOH
HOH
360
A
HOH
96
4
HOH
HOH
361
A
HOH
138
4
HOH
HOH
362
A
HOH
126
4
HOH
HOH
363
A
HOH
134
4
HOH
HOH
364
A
HOH
156
4
HOH
HOH
365
A
HOH
160
4
HOH
HOH
366
A
HOH
73
4
HOH
HOH
367
A
HOH
79
4
HOH
HOH
368
A
HOH
105
4
HOH
HOH
369
A
HOH
125
4
HOH
HOH
370
A
HOH
34
4
HOH
HOH
371
A
HOH
117
4
HOH
HOH
372
A
HOH
36
4
HOH
HOH
373
A
HOH
132
4
HOH
HOH
374
A
HOH
165
4
HOH
HOH
375
A
HOH
97
4
HOH
HOH
376
A
HOH
143
4
HOH
HOH
377
A
HOH
1
4
HOH
HOH
378
A
HOH
3
4
HOH
HOH
379
A
HOH
4
4
HOH
HOH
380
A
HOH
8
4
HOH
HOH
381
A
HOH
13
4
HOH
HOH
382
A
HOH
14
4
HOH
HOH
383
A
HOH
17
4
HOH
HOH
384
A
HOH
18
4
HOH
HOH
385
A
HOH
26
4
HOH
HOH
386
A
HOH
29
4
HOH
HOH
387
A
HOH
32
4
HOH
HOH
388
A
HOH
33
4
HOH
HOH
389
A
HOH
37
4
HOH
HOH
390
A
HOH
38
4
HOH
HOH
391
A
HOH
40
4
HOH
HOH
392
A
HOH
42
4
HOH
HOH
393
A
HOH
43
4
HOH
HOH
394
A
HOH
50
4
HOH
HOH
395
A
HOH
51
4
HOH
HOH
396
A
HOH
53
4
HOH
HOH
397
A
HOH
54
4
HOH
HOH
398
A
HOH
55
4
HOH
HOH
399
A
HOH
58
4
HOH
HOH
400
A
HOH
59
4
HOH
HOH
401
A
HOH
60
4
HOH
HOH
402
A
HOH
61
4
HOH
HOH
403
A
HOH
62
4
HOH
HOH
404
A
HOH
64
4
HOH
HOH
405
A
HOH
65
4
HOH
HOH
406
A
HOH
67
4
HOH
HOH
407
A
HOH
68
4
HOH
HOH
408
A
HOH
70
4
HOH
HOH
409
A
HOH
71
4
HOH
HOH
410
A
HOH
72
4
HOH
HOH
411
A
HOH
75
4
HOH
HOH
412
A
HOH
76
4
HOH
HOH
413
A
HOH
77
4
HOH
HOH
414
A
HOH
78
4
HOH
HOH
415
A
HOH
81
4
HOH
HOH
416
A
HOH
82
4
HOH
HOH
417
A
HOH
84
4
HOH
HOH
418
A
HOH
85
4
HOH
HOH
419
A
HOH
89
4
HOH
HOH
420
A
HOH
90
4
HOH
HOH
421
A
HOH
91
4
HOH
HOH
422
A
HOH
93
4
HOH
HOH
423
A
HOH
95
4
HOH
HOH
424
A
HOH
101
4
HOH
HOH
425
A
HOH
102
4
HOH
HOH
426
A
HOH
103
4
HOH
HOH
427
A
HOH
104
4
HOH
HOH
428
A
HOH
106
4
HOH
HOH
429
A
HOH
111
4
HOH
HOH
430
A
HOH
113
4
HOH
HOH
431
A
HOH
114
4
HOH
HOH
432
A
HOH
118
4
HOH
HOH
433
A
HOH
124
4
HOH
HOH
434
A
HOH
127
4
HOH
HOH
435
A
HOH
128
4
HOH
HOH
436
A
HOH
131
4
HOH
HOH
437
A
HOH
136
4
HOH
HOH
438
A
HOH
137
4
HOH
HOH
439
A
HOH
139
4
HOH
HOH
440
A
HOH
140
4
HOH
HOH
441
A
HOH
142
4
HOH
HOH
442
A
HOH
148
4
HOH
HOH
443
A
HOH
150
4
HOH
HOH
444
A
HOH
152
4
HOH
HOH
445
A
HOH
158
4
HOH
HOH
446
A
HOH
163
4
HOH
HOH
447
A
HOH
167
4
HOH
HOH
448
A
HOH
169
4
HOH
HOH
449
A
HOH
170
4
HOH
HOH
450
A
HOH
172
4
HOH
HOH
451
A
HOH
175
4
HOH
HOH
452
A
HOH
178
4
HOH
HOH
453
A
HOH
182
4
HOH
HOH
454
A
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
ASN
3
n
3
ASN
3
A
GLU
4
n
4
GLU
4
A
LYS
5
n
5
LYS
5
A
ALA
6
n
6
ALA
6
A
VAL
7
n
7
VAL
7
A
ILE
8
n
8
ILE
8
A
LEU
9
n
9
LEU
9
A
ASP
10
n
10
ASP
10
A
GLU
11
n
11
GLU
11
A
GLN
12
n
12
GLN
12
A
ALA
13
n
13
ALA
13
A
ILE
14
n
14
ILE
14
A
ARG
15
n
15
ARG
15
A
ARG
16
n
16
ARG
16
A
ALA
17
n
17
ALA
17
A
LEU
18
n
18
LEU
18
A
THR
19
n
19
THR
19
A
ARG
20
n
20
ARG
20
A
ILE
21
n
21
ILE
21
A
ALA
22
n
22
ALA
22
A
HIS
23
n
23
HIS
23
A
GLU
24
n
24
GLU
24
A
ILE
25
n
25
ILE
25
A
ILE
26
n
26
ILE
26
A
GLU
27
n
27
GLU
27
A
ARG
28
n
28
ARG
28
A
ASN
29
n
29
ASN
29
A
LYS
30
n
30
LYS
30
A
GLY
31
n
31
GLY
31
A
VAL
32
n
32
VAL
32
A
ASP
33
n
33
ASP
33
A
ASN
34
n
34
ASN
34
A
CYS
35
n
35
CYS
35
A
VAL
36
n
36
VAL
36
A
LEU
37
n
37
LEU
37
A
VAL
38
n
38
VAL
38
A
GLY
39
n
39
GLY
39
A
ILE
40
n
40
ILE
40
A
LYS
41
n
41
LYS
41
A
THR
42
n
42
THR
42
A
ARG
43
n
43
ARG
43
A
GLY
44
n
44
GLY
44
A
ILE
45
n
45
ILE
45
A
TYR
46
n
46
TYR
46
A
LEU
47
n
47
LEU
47
A
ALA
48
n
48
ALA
48
A
LYS
49
n
49
LYS
49
A
ARG
50
n
50
ARG
50
A
LEU
51
n
51
LEU
51
A
ALA
52
n
52
ALA
52
A
GLU
53
n
53
GLU
53
A
ARG
54
n
54
ARG
54
A
ILE
55
n
55
ILE
55
A
GLU
56
n
56
GLU
56
A
GLN
57
n
57
GLN
57
A
ILE
58
n
58
ILE
58
A
GLU
59
n
59
GLU
59
A
GLY
60
n
60
GLY
60
A
LYS
61
n
61
LYS
61
A
PRO
62
n
62
PRO
62
A
VAL
63
n
63
VAL
63
A
PRO
64
n
64
PRO
64
A
VAL
65
n
65
VAL
65
A
GLY
66
n
66
GLY
66
A
GLU
67
n
67
GLU
67
A
ILE
68
n
68
ILE
68
A
ASP
69
n
69
ASP
69
A
ILE
70
n
70
ILE
70
A
THR
71
n
71
THR
71
A
LEU
72
n
72
LEU
72
A
TYR
73
n
73
TYR
73
A
ARG
74
n
74
ARG
74
A
ASP
75
n
75
ASP
75
A
ASP
76
n
76
ASP
76
A
LEU
77
n
77
LEU
77
A
SER
78
n
78
SER
78
A
VAL
79
n
79
VAL
79
A
THR
80
n
80
THR
80
A
SER
81
n
81
SER
81
A
ASN
82
n
82
ASN
82
A
ASP
83
n
83
ASP
83
A
GLU
84
n
84
GLU
84
A
PRO
85
n
85
PRO
85
A
LEU
86
n
86
LEU
86
A
VAL
87
n
87
VAL
87
A
LYS
88
n
88
LYS
88
A
GLY
89
n
89
GLY
89
A
THR
90
n
90
THR
90
A
ASP
91
n
91
ASP
91
A
ILE
92
n
92
ILE
92
A
PRO
93
n
93
PRO
93
A
VAL
94
n
94
VAL
94
A
ASP
95
n
95
ASP
95
A
ILE
96
n
96
ILE
96
A
THR
97
n
97
THR
97
A
ASP
98
n
98
ASP
98
A
LYS
99
n
99
LYS
99
A
LYS
100
n
100
LYS
100
A
VAL
101
n
101
VAL
101
A
ILE
102
n
102
ILE
102
A
LEU
103
n
103
LEU
103
A
VAL
104
n
104
VAL
104
A
ASP
105
n
105
ASP
105
A
ASP
106
n
106
ASP
106
A
VAL
107
n
107
VAL
107
A
LEU
108
n
108
LEU
108
A
TYR
109
n
109
TYR
109
A
THR
110
n
110
THR
110
A
GLY
111
n
111
GLY
111
A
ARG
112
n
112
ARG
112
A
THR
113
n
113
THR
113
A
VAL
114
n
114
VAL
114
A
ARG
115
n
115
ARG
115
A
ALA
116
n
116
ALA
116
A
GLY
117
n
117
GLY
117
A
MET
118
n
118
MET
118
A
ASP
119
n
119
ASP
119
A
ALA
120
n
120
ALA
120
A
LEU
121
n
121
LEU
121
A
MET
122
n
122
MET
122
A
ASP
123
n
123
ASP
123
A
LEU
124
n
124
LEU
124
A
GLY
125
n
125
GLY
125
A
ARG
126
n
126
ARG
126
A
PRO
127
n
127
PRO
127
A
SER
128
n
128
SER
128
A
GLN
129
n
129
GLN
129
A
ILE
130
n
130
ILE
130
A
GLN
131
n
131
GLN
131
A
LEU
132
n
132
LEU
132
A
ALA
133
n
133
ALA
133
A
VAL
134
n
134
VAL
134
A
LEU
135
n
135
LEU
135
A
VAL
136
n
136
VAL
136
A
ASP
137
n
137
ASP
137
A
ARG
138
n
138
ARG
138
A
GLY
139
n
139
GLY
139
A
HIS
140
n
140
HIS
140
A
ARG
141
n
141
ARG
141
A
GLU
142
n
142
GLU
142
A
LEU
143
n
143
LEU
143
A
PRO
144
n
144
PRO
144
A
ILE
145
n
145
ILE
145
A
ARG
146
n
146
ARG
146
A
ALA
147
n
147
ALA
147
A
ASP
148
n
148
ASP
148
A
TYR
149
n
149
TYR
149
A
VAL
150
n
150
VAL
150
A
GLY
151
n
151
GLY
151
A
LYS
152
n
152
LYS
152
A
ASN
153
n
153
ASN
153
A
VAL
154
n
154
VAL
154
A
PRO
155
n
155
PRO
155
A
THR
156
n
156
THR
156
A
SER
157
n
157
SER
157
A
LYS
158
n
158
LYS
158
A
SER
159
n
159
SER
159
A
GLU
160
n
160
GLU
160
A
ARG
161
n
161
ARG
161
A
ILE
162
n
162
ILE
162
A
VAL
163
n
163
VAL
163
A
VAL
164
n
164
VAL
164
A
GLN
165
n
165
GLN
165
A
LEU
166
n
166
LEU
166
A
ASP
167
n
167
ASP
167
A
GLU
168
n
168
GLU
168
A
VAL
169
n
169
VAL
169
A
ASP
170
n
170
ASP
170
A
GLN
171
n
171
GLN
171
A
ASN
172
n
172
ASN
172
A
ASP
173
n
173
ASP
173
A
ARG
174
n
174
ARG
174
A
VAL
175
n
175
VAL
175
A
SER
176
n
176
SER
176
A
ILE
177
n
177
ILE
177
A
TYR
178
n
178
TYR
178
A
GLU
179
n
179
GLU
179
A
ASN
180
n
180
ASN
180
A
software_defined_assembly
PISA
1
monomeric
710
-24
9520
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
9
A
N
LEU
9
A
O
VAL
175
A
O
VAL
175
A
O
SER
176
A
O
SER
176
A
N
VAL
163
A
N
VAL
163
A
O
GLU
84
A
O
GLU
84
A
N
TYR
73
A
N
TYR
73
A
O
ILE
68
A
O
ILE
68
A
N
GLY
39
A
N
GLY
39
A
N
VAL
36
A
N
VAL
36
A
O
ILE
102
A
O
ILE
102
A
N
LEU
103
A
N
LEU
103
A
O
ALA
133
A
O
ALA
133
A
N
VAL
134
A
N
VAL
134
A
O
GLY
151
A
O
GLY
151
1
A
HOH
324
F
HOH
1
A
HOH
368
F
HOH
1
A
A
O
O
HOH
HOH
305
359
1.81
1
A
A
O
O
HOH
HOH
383
432
1.91
1
A
A
OD2
O
ASP
HOH
106
407
2.16
1
A
A
O
O
HOH
HOH
312
351
2.19
1
-3.18
0.50
120.30
117.12
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
115
115
115
N
1
-3.67
0.50
120.30
116.63
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
141
141
141
N
1
A
A
OE1
OE1
GLN
GLN
12
12
1.39
1_555
2_757
1
A
LYS
41
79.95
155.94
1
A
ASP
98
57.30
19.74
1
A
TYR
109
-130.65
-101.45
1
A
ARG
174
-170.76
136.79
25.186
1.49
-0.00
1.39
1.44
0.00
-3.18
0.922
0.863
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.26950
0.20466
0.20767
2.20
42.55
434
8535
4.8
97.78
8.390
0.210
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.401
0.263
0.80
0.80
1.20
1a3c
MAXIMUM LIKELIHOOD
MASK
2.20
42.55
154
1587
22
0
1411
0.013
0.019
1460
0.002
0.020
1472
1.768
2.005
1978
0.814
3.000
3380
6.557
5.000
183
37.964
24.179
67
14.841
15.000
274
16.229
15.000
16
0.082
0.200
240
0.005
0.021
1626
0.001
0.020
294
1.829
2.255
729
1.807
2.250
728
2.911
3.359
913
2.911
3.365
914
2.484
2.647
728
2.481
2.647
728
4.114
3.829
1065
7.121
21.715
6353
7.122
21.714
6353
0.261
0.209
2.257
41
621
20
97.35
2.20
42.55
4P84
8535
1
3.1
2.6
98.4
0.382
2.20
2.27
2.2
2.7
98.0
refinement
REFMAC
5.8.0069
data scaling
Aimless
phasing
PHASER
data reduction
MOSFLM
Structure of engineered PyrR protein (VIOLET PyrR)
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
4
N
N
A
ASP
10
A
ASP
10
HELX_P
A
LYS
30
A
LYS
30
1
AA1
21
A
LYS
41
A
LYS
41
HELX_P
A
GLY
60
A
GLY
60
1
AA2
20
A
GLY
111
A
GLY
111
HELX_P
A
GLY
125
A
GLY
125
1
AA3
15
A
LEU
166
A
LEU
166
HELX_P
A
GLN
171
A
GLN
171
1
AA4
6
TRANSFERASE
RNA binding proteins, reconstructed amino acid sequence, transferase
4P84
PDB
1
4P84
1
180
4P84
1
180
4P84
A
1
1
180
3
6
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
A
LYS
5
A
LYS
5
A
LEU
9
A
LEU
9
A
ARG
174
A
ARG
174
A
GLU
179
A
GLU
179
A
GLU
160
A
GLU
160
A
GLN
165
A
GLN
165
A
GLU
84
A
GLU
84
A
ASP
91
A
ASP
91
A
VAL
65
A
VAL
65
A
TYR
73
A
TYR
73
A
CYS
35
A
CYS
35
A
ILE
40
A
ILE
40
A
LYS
100
A
LYS
100
A
LEU
108
A
LEU
108
A
GLN
129
A
GLN
129
A
ASP
137
A
ASP
137
A
TYR
149
A
TYR
149
A
ASN
153
A
ASN
153
binding site for residue SO4 A 201
A
SO4
201
Software
11
binding site for residue SO4 A 202
A
SO4
202
Software
7
binding site for residue GOL A 203
A
GOL
203
Software
2
binding site for residue GOL A 204
A
GOL
204
Software
4
A
LYS
41
A
LYS
41
11
1_555
A
ASP
105
A
ASP
105
11
1_555
A
VAL
107
A
VAL
107
11
1_555
A
LEU
108
A
LEU
108
11
1_555
A
TYR
109
A
TYR
109
11
1_555
A
THR
110
A
THR
110
11
1_555
A
GLY
111
A
GLY
111
11
1_555
A
ARG
112
A
ARG
112
11
1_555
A
THR
113
A
THR
113
11
1_555
A
VAL
114
A
VAL
114
11
1_555
A
HOH
380
F
HOH
11
1_555
A
ASP
10
A
ASP
10
7
3_545
A
GLU
11
A
GLU
11
7
3_545
A
ARG
15
A
ARG
15
7
4_747
A
ARG
126
A
ARG
126
7
1_555
A
ARG
174
A
ARG
174
7
3_545
A
HOH
315
F
HOH
7
1_555
A
HOH
330
F
HOH
7
1_555
A
ASP
83
A
ASP
83
2
1_555
A
ARG
112
A
ARG
112
2
1_555
A
ASP
137
A
ASP
137
4
1_555
A
ARG
141
A
ARG
141
4
1_555
A
ARG
146
A
ARG
146
4
1_555
A
HOH
414
F
HOH
4
1_555
5
I 1 2 1