0.023864 0.000000 0.000000 -0.000000 0.023864 0.000000 0.000000 -0.000000 0.009290 0.00000 0.00000 0.00000 Clements, J.H. Martin, S.F. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 41.905 41.905 107.642 C7 H13 N O2 143.184 n 1-aminocyclohexanecarboxylic acid peptide linking C2 H3 O2 -1 59.044 ACETATE ION non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cl -1 35.453 CHLORIDE ION non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking H2 N 16.023 AMINO GROUP non-polymer C12 H13 N O2 203.237 3-(1-methyl-1H-indol-3-yl)propanoic acid non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C9 H12 N O6 P 261.168 n O-PHOSPHOTYROSINE PHOSPHONOTYROSINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O N 2 N C N 3 N C N 4 N C N 5 N C N 6 N C N 7 N N N 8 N C N 9 N C N 10 N H N 11 N H N 12 N H N 13 N H N 14 N H N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N O N 22 N H N 23 N H N 24 N C N 25 N O N 26 N O N 27 N C N 28 N H N 29 N H N 30 N H N 31 N N N 32 S C N 33 N C N 34 N O N 35 N C N 36 N O N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N N N 45 S C N 46 N C N 47 N O N 48 N C N 49 N C N 50 N C N 51 N N N 52 N C N 53 N N N 54 N N N 55 N O N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N N N 72 S C N 73 N C N 74 N O N 75 N C N 76 N C N 77 N O N 78 N N N 79 N O N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N O N 95 N O N 96 N O N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N CL N 105 N N N 106 S C N 107 N C N 108 N O N 109 N C N 110 N C N 111 N C N 112 N O N 113 N N N 114 N O N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N N N 126 S C N 127 N C N 128 N O N 129 N C N 130 N C N 131 N C N 132 N O N 133 N O N 134 N O N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 N C N 146 N C N 147 N O N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N C N 155 N O N 156 N C N 157 N O N 158 N C N 159 N O N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N N N 169 S C N 170 N C N 171 N O N 172 N C Y 173 N C Y 174 N N Y 175 N C Y 176 N C Y 177 N N N 178 N O N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N O N 190 N H N 191 N H N 192 N N N 193 S C N 194 N C N 195 N O N 196 S C N 197 N C N 198 N C N 199 N C N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N N N 215 S C N 216 N C N 217 N O N 218 N C N 219 N C N 220 N C N 221 N C N 222 N O N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C N 241 N C N 242 N C N 243 N C N 244 N N N 245 N O N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N N N 262 S C N 263 N C N 264 N O N 265 N C N 266 N C N 267 N S N 268 N C N 269 N O N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N N 282 N H N 283 N H N 284 N C Y 285 N N Y 286 N C Y 287 N C Y 288 N C Y 289 N C Y 290 N C Y 291 N C Y 292 N C Y 293 N C N 294 N C N 295 N C N 296 N C N 297 N O N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C Y 321 N C Y 322 N C N 323 N O N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N N N 336 S C N 337 N C N 338 N O N 339 N C N 340 N C N 341 N C N 342 N O N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N N N 353 S C N 354 N C N 355 N O N 356 N O N 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N C Y 362 N C Y 363 N C N 364 N O N 365 N P N 366 N O N 367 N O N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N N N 382 S C N 383 N C N 384 N O N 385 N C N 386 N O N 387 N O N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N N N 396 S C N 397 N C N 398 N O N 399 R C N 400 N O N 401 N C N 402 N O N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N N N 413 S C N 414 N C N 415 N O N 416 N C Y 417 N C Y 418 N C Y 419 N C Y 420 N N Y 421 N C Y 422 N C Y 423 N C Y 424 N C Y 425 N C N 426 N O N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N N N 440 S C N 441 N C N 442 N O N 443 N C Y 444 N C Y 445 N C Y 446 N C Y 447 N C Y 448 N C Y 449 N C N 450 N O N 451 N O N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N N N 464 S C N 465 N C N 466 N O N 467 N C N 468 N C N 469 N C N 470 N O N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N doub N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N doub N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N doub N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N doub N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N doub N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N doub N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N doub N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing Y 169 N sing Y 170 N doub Y 171 N doub N 172 N sing Y 173 N sing N 174 N sing Y 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N doub N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N doub N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing Y 268 N doub Y 269 N sing Y 270 N sing Y 271 N doub Y 272 N doub Y 273 N sing Y 274 N sing N 275 N sing N 276 N sing N 277 N sing Y 278 N sing Y 279 N doub N 280 N doub Y 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N doub N 313 N sing Y 314 N doub N 315 N sing Y 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N doub N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing Y 349 N doub Y 350 N sing Y 351 N sing N 352 N sing Y 353 N doub N 354 N sing Y 355 N doub N 356 N sing Y 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N doub N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N doub N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N doub N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N doub N 402 N sing N 403 N sing N 404 N sing N 405 N sing Y 406 N doub Y 407 N sing Y 408 N sing N 409 N sing Y 410 N doub Y 411 N sing Y 412 N sing N 413 N sing Y 414 N sing Y 415 N doub N 416 N sing Y 417 N doub N 418 N sing Y 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N doub N 430 N sing N 431 N sing N 432 N sing N 433 N sing Y 434 N doub Y 435 N sing Y 436 N sing N 437 N sing Y 438 N doub N 439 N sing Y 440 N doub N 441 N sing Y 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N doub N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing UK Bioorg.Med.Chem.Lett. BMCLE8 1127 1464-3405 24 3164 3167 10.1016/j.bmcl.2014.04.114 24856058 Protein-ligand interactions: Probing the energetics of a putative cation-pi interaction. 2014 10.2210/pdb4p9z/pdb pdb_00004p9z 100 1 IMAGE PLATE 2010-12-10 RIGAKU RAXIS IV++ SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 13758.543 Growth factor receptor-bound protein 2 1 man polymer 683.669 NMI-PTR-02K-ASN-NH2 1 syn polymer 92.094 GLYCEROL 1 syn non-polymer 59.044 ACETATE ION 2 syn non-polymer 35.453 CHLORIDE ION 1 syn non-polymer 18.015 water 66 nat water Adapter protein GRB2,Protein Ash,SH2/SH3 adapter GRB2 no no IEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELV DYHRSTSVSRNQQIFLRDIEQVPQQPTYVQAHHHHHH IEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELV DYHRSTSVSRNQQIFLRDIEQVPQQPTYVQAHHHHHH A polypeptide(L) no yes (NMI)(PTR)(02K)N(NH2) XYANX B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 117 GRB2, ASH 9606 Homo sapiens 562 Escherichia coli SG13009 Plasmid Biological sequence PQE-60 1 1.64 24.82 VAPOR DIFFUSION, HANGING DROP 8.5 0.2 M sodium acetate trihydrate, 0.1 M TRIS hydrochloride, 30% w/v polyethylene glycol 4000 296 citation entity_src_gen pdbx_database_status pdbx_entity_src_syn pdbx_struct_assembly pdbx_struct_oper_list struct_keywords pdbx_audit_support pdbx_audit_support chem_comp_atom chem_comp_bond database_2 refine_hist repository Initial release Database references Database references Derived calculations Other Source and taxonomy Structure summary Author supporting evidence Author supporting evidence Data collection Database references Refinement description 1 0 2014-06-18 1 1 2014-07-16 1 2 2017-08-09 1 3 2017-09-27 1 4 2019-11-27 1 5 2023-12-27 _citation.journal_id_CSD _entity_src_gen.pdbx_alt_source_flag _pdbx_database_status.pdb_format_compatible _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_struct_assembly.oligomeric_details _pdbx_struct_oper_list.symmetry_operation _struct_keywords.text _pdbx_audit_support.funding_organization _pdbx_audit_support.funding_organization _database_2.pdbx_DOI _database_2.pdbx_database_accession _refine_hist.number_atoms_solvent _refine_hist.number_atoms_total _refine_hist.pdbx_number_atoms_ligand _refine_hist.pdbx_number_atoms_nucleic_acid _refine_hist.pdbx_number_atoms_protein United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM 84965 United States National Science Foundation (NSF, United States) CHE 0750329 United States Robert A. Welch Foundation F-652 3S8O contains the same protein complexed with a similar ligand N RCSB Y RCSB 2014-04-06 REL REL GOL GLYCEROL ACT ACETATE ION CL CHLORIDE ION HOH water 32630 synthetic construct sample 1 5 GOL 1 3 GOL GOL 201 A ACT 2 4 ACT ACT 202 A ACT 3 4 ACT ACT 203 A CL 4 5 CL CL 204 A HOH 53 6 HOH HOH 301 A HOH 52 6 HOH HOH 302 A HOH 37 6 HOH HOH 303 A HOH 36 6 HOH HOH 304 A HOH 22 6 HOH HOH 305 A HOH 49 6 HOH HOH 306 A HOH 16 6 HOH HOH 307 A HOH 21 6 HOH HOH 308 A HOH 13 6 HOH HOH 309 A HOH 11 6 HOH HOH 310 A HOH 32 6 HOH HOH 311 A HOH 43 6 HOH HOH 312 A HOH 46 6 HOH HOH 313 A HOH 20 6 HOH HOH 314 A HOH 19 6 HOH HOH 315 A HOH 12 6 HOH HOH 316 A HOH 55 6 HOH HOH 317 A HOH 66 6 HOH HOH 318 A HOH 4 6 HOH HOH 319 A HOH 44 6 HOH HOH 320 A HOH 18 6 HOH HOH 321 A HOH 48 6 HOH HOH 322 A HOH 33 6 HOH HOH 323 A HOH 31 6 HOH HOH 324 A HOH 35 6 HOH HOH 325 A HOH 42 6 HOH HOH 326 A HOH 41 6 HOH HOH 327 A HOH 34 6 HOH HOH 328 A HOH 7 6 HOH HOH 329 A HOH 63 6 HOH HOH 330 A HOH 2 6 HOH HOH 331 A HOH 38 6 HOH HOH 332 A HOH 10 6 HOH HOH 333 A HOH 5 6 HOH HOH 334 A HOH 15 6 HOH HOH 335 A HOH 50 6 HOH HOH 336 A HOH 47 6 HOH HOH 337 A HOH 1 6 HOH HOH 338 A HOH 64 6 HOH HOH 339 A HOH 59 6 HOH HOH 340 A HOH 58 6 HOH HOH 341 A HOH 54 6 HOH HOH 342 A HOH 61 6 HOH HOH 343 A HOH 3 6 HOH HOH 344 A HOH 8 6 HOH HOH 345 A HOH 9 6 HOH HOH 346 A HOH 14 6 HOH HOH 347 A HOH 17 6 HOH HOH 348 A HOH 23 6 HOH HOH 349 A HOH 24 6 HOH HOH 350 A HOH 25 6 HOH HOH 351 A HOH 26 6 HOH HOH 352 A HOH 27 6 HOH HOH 353 A HOH 29 6 HOH HOH 354 A HOH 30 6 HOH HOH 355 A HOH 39 6 HOH HOH 356 A HOH 40 6 HOH HOH 357 A HOH 45 6 HOH HOH 358 A HOH 56 6 HOH HOH 359 A HOH 60 6 HOH HOH 360 A HOH 65 6 HOH HOH 361 A HOH 67 6 HOH HOH 362 A HOH 62 6 HOH HOH 101 B HOH 6 6 HOH HOH 102 B HOH 28 6 HOH HOH 103 B HOH 51 6 HOH HOH 104 B n 1 53 A GLU 54 n 2 GLU 54 A MET 55 n 3 MET 55 A LYS 56 n 4 LYS 56 A PRO 57 n 5 PRO 57 A HIS 58 n 6 HIS 58 A PRO 59 n 7 PRO 59 A TRP 60 n 8 TRP 60 A PHE 61 n 9 PHE 61 A PHE 62 n 10 PHE 62 A GLY 63 n 11 GLY 63 A LYS 64 n 12 LYS 64 A ILE 65 n 13 ILE 65 A PRO 66 n 14 PRO 66 A ARG 67 n 15 ARG 67 A ALA 68 n 16 ALA 68 A LYS 69 n 17 LYS 69 A ALA 70 n 18 ALA 70 A GLU 71 n 19 GLU 71 A GLU 72 n 20 GLU 72 A MET 73 n 21 MET 73 A LEU 74 n 22 LEU 74 A SER 75 n 23 SER 75 A LYS 76 n 24 LYS 76 A GLN 77 n 25 GLN 77 A ARG 78 n 26 ARG 78 A HIS 79 n 27 HIS 79 A ASP 80 n 28 ASP 80 A GLY 81 n 29 GLY 81 A ALA 82 n 30 ALA 82 A PHE 83 n 31 PHE 83 A LEU 84 n 32 LEU 84 A ILE 85 n 33 ILE 85 A ARG 86 n 34 ARG 86 A GLU 87 n 35 GLU 87 A SER 88 n 36 SER 88 A GLU 89 n 37 GLU 89 A SER 90 n 38 SER 90 A ALA 91 n 39 ALA 91 A PRO 92 n 40 PRO 92 A GLY 93 n 41 GLY 93 A ASP 94 n 42 ASP 94 A PHE 95 n 43 PHE 95 A SER 96 n 44 SER 96 A LEU 97 n 45 LEU 97 A SER 98 n 46 SER 98 A VAL 99 n 47 VAL 99 A LYS 100 n 48 LYS 100 A PHE 101 n 49 PHE 101 A GLY 102 n 50 GLY 102 A ASN 103 n 51 ASN 103 A ASP 104 n 52 ASP 104 A VAL 105 n 53 VAL 105 A GLN 106 n 54 GLN 106 A HIS 107 n 55 HIS 107 A PHE 108 n 56 PHE 108 A LYS 109 n 57 LYS 109 A VAL 110 n 58 VAL 110 A LEU 111 n 59 LEU 111 A ARG 112 n 60 ARG 112 A ASP 113 n 61 ASP 113 A GLY 114 n 62 GLY 114 A ALA 115 n 63 ALA 115 A GLY 116 n 64 GLY 116 A LYS 117 n 65 LYS 117 A TYR 118 n 66 TYR 118 A PHE 119 n 67 PHE 119 A LEU 120 n 68 LEU 120 A TRP 121 n 69 TRP 121 A VAL 122 n 70 VAL 122 A VAL 123 n 71 VAL 123 A LYS 124 n 72 LYS 124 A PHE 125 n 73 PHE 125 A ASN 126 n 74 ASN 126 A SER 127 n 75 SER 127 A LEU 128 n 76 LEU 128 A ASN 129 n 77 ASN 129 A GLU 130 n 78 GLU 130 A LEU 131 n 79 LEU 131 A VAL 132 n 80 VAL 132 A ASP 133 n 81 ASP 133 A TYR 134 n 82 TYR 134 A HIS 135 n 83 HIS 135 A ARG 136 n 84 ARG 136 A SER 137 n 85 SER 137 A THR 138 n 86 THR 138 A SER 139 n 87 SER 139 A VAL 140 n 88 VAL 140 A SER 141 n 89 SER 141 A ARG 142 n 90 ARG 142 A ASN 143 n 91 ASN 143 A GLN 144 n 92 GLN 144 A GLN 145 n 93 GLN 145 A ILE 146 n 94 ILE 146 A PHE 147 n 95 PHE 147 A LEU 148 n 96 LEU 148 A ARG 149 n 97 ARG 149 A ASP 150 n 98 ASP 150 A ILE 151 n 99 ILE 151 A GLU 152 n 100 GLU 152 A GLN 153 n 101 GLN 153 A VAL 154 n 102 VAL 154 A PRO 155 n 103 PRO 155 A GLN 156 n 104 GLN 156 A GLN 157 n 105 GLN 157 A PRO 158 n 106 PRO 158 A THR 159 n 107 THR 159 A TYR 160 n 108 TYR 160 A VAL 161 n 109 VAL 161 A GLN 162 n 110 GLN 162 A n 111 163 A n 112 164 A n 113 165 A n 114 166 A n 115 167 A n 116 168 A n 117 169 A NMI 1 n 1 NMI 1 B PTR 2 n 2 PTR 2 B C6C 3 n 3 02K 3 B ASN 4 n 4 ASN 4 B NH2 5 n 5 NH2 5 B author_defined_assembly 2 dimeric software_defined_assembly PISA 4 tetrameric 5860 -50 12250 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 7_645 y+1,x-1,-z crystal symmetry operation 41.9050000000 -41.9050000000 0.0000000000 A O ASP 104 A O ASP 52 A N PHE 101 A N PHE 49 A O SER 98 A O SER 46 A N LEU 84 A N LEU 32 A N PHE 83 A N PHE 31 A O ARG 149 A O ARG 97 A N LEU 111 A N LEU 59 A O PHE 119 A O PHE 67 A N TYR 118 A N TYR 66 A O PHE 125 A O PHE 73 1 A HOH 302 G HOH 1 A N GLU 54 A N GLU 2 1 Y 1 A CB GLU 54 A CB GLU 2 1 Y 1 A CG GLU 54 A CG GLU 2 1 Y 1 A CD GLU 54 A CD GLU 2 1 Y 1 A OE1 GLU 54 A OE1 GLU 2 1 Y 1 A OE2 GLU 54 A OE2 GLU 2 1 Y 1 A ILE 53 A ILE 1 1 Y 1 A ALA 163 A ALA 111 1 Y 1 A HIS 164 A HIS 112 1 Y 1 A HIS 165 A HIS 113 1 Y 1 A HIS 166 A HIS 114 1 Y 1 A HIS 167 A HIS 115 1 Y 1 A HIS 168 A HIS 116 1 Y 1 A HIS 169 A HIS 117 1 Y 1 B PTR 2 11.13 1 B B C N PTR 02K 2 3 0.152 0.023 1.336 1.488 Y 1 B B C N 02K ASN 3 4 0.205 0.023 1.336 1.541 Y 1 A MET 55 37.89 69.38 1 A TRP 121 -128.56 -66.26 1 A GLN 153 127.55 -60.11 1 A VAL 154 69.40 69.65 1 A GLN 156 35.90 100.33 27.728 0.05 -0.00 -0.00 0.05 0.00 -0.10 0.955 0.938 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT 0.23943 0.18093 0.18367 1.80 6.00 432 8591 4.8 94.93 3.445 0.109 RANDOM 1 THROUGHOUT 0.168 0.157 0.80 0.80 1.20 MAXIMUM LIKELIHOOD MASK 1.80 6.00 66 1024 15 0 943 0.017 0.020 1033 1.889 1.982 1398 7.972 5.000 120 33.584 23.600 50 16.408 15.000 174 21.157 15.000 7 0.121 0.200 140 0.011 0.021 805 0.379 0.229 1.842 35 485 20 98.86 1.80 50.00 4P9Z 9395 0.087 1 19.0 7.1 98.3 0.331 1.80 1.86 8.8 1 7.4 100.0 refinement REFMAC 5.6.0117 Grb2 SH2 complexed with a pTyr-Ac6c-Asn tripeptide 1 N N 2 N N 3 N N 4 N N 4 N N 5 N N 6 N N 6 N N A PRO 66 A PRO 14 HELX_P A LYS 76 A LYS 24 1 AA1 11 A SER 127 A SER 75 HELX_P A HIS 135 A HIS 83 1 AA2 9 covale 1.587 both B NMI 1 B CAC NMI 1 1_555 B PTR 2 B N PTR 2 1_555 covale 1.488 both B PTR 2 B C PTR 2 1_555 B 02K 3 B N 02K 3 1_555 covale 1.541 both B 02K 3 B C 02K 3 1_555 B ASN 4 B N ASN 4 1_555 covale 1.342 both B ASN 4 B C ASN 4 1_555 B NH2 5 B N NH2 5 1_555 Signaling Protein/Antagonist Grb2 SH2, Cation-Pi Interaction, Signaling Protein-Antagonist complex GRB2_HUMAN UNP 1 53 P62993 IEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELV DYHRSTSVSRNQQIFLRDIEQVPQQPTYVQA 4P9Z PDB 2 4P9Z 53 163 4P9Z 53 163 P62993 A 1 1 111 1 5 4P9Z 1 5 4P9Z B 2 1 5 4 3 anti-parallel anti-parallel parallel anti-parallel anti-parallel A ASP 104 A ASP 52 A LYS 109 A LYS 57 A PHE 95 A PHE 43 A PHE 101 A PHE 49 A ALA 82 A ALA 30 A GLU 87 A GLU 35 A ARG 149 A ARG 97 A ASP 150 A ASP 98 A LEU 111 A LEU 59 A ARG 112 A ARG 60 A TYR 118 A TYR 66 A PHE 119 A PHE 67 A LYS 124 A LYS 72 A PHE 125 A PHE 73 binding site for residue GOL A 201 A GOL 201 Software 7 binding site for residue ACT A 202 A ACT 202 Software 6 binding site for residue ACT A 203 A ACT 203 Software 5 binding site for residue CL A 204 A CL 204 Software 2 binding site for NMI-PTR-02K-ASN-NH2 B NMI 1 Software 23 A PHE 125 A PHE 73 7 1_555 A ASN 126 A ASN 74 7 1_555 A GLU 130 A GLU 78 7 1_555 A ASN 143 A ASN 91 7 6_545 A GLN 157 A GLN 105 7 4_645 A THR 159 A THR 107 7 4_645 A HOH 321 G HOH 7 6_545 A VAL 123 A VAL 71 6 1_555 A TYR 134 A TYR 82 6 1_555 A HIS 135 A HIS 83 6 1_555 A THR 138 A THR 86 6 1_555 A HOH 318 G HOH 6 1_555 A HOH 361 G HOH 6 1_555 A LYS 76 A LYS 24 5 7_655 A ARG 78 A ARG 26 5 7_655 A ASP 94 A ASP 42 5 1_555 A LEU 111 A LEU 59 5 1_555 A ARG 112 A ARG 60 5 1_555 A SER 139 A SER 87 2 1_555 A GLN 145 A GLN 93 2 1_555 A ARG 67 A ARG 15 23 1_555 A ARG 78 A ARG 26 23 7_655 A ARG 86 A ARG 34 23 1_555 A SER 88 A SER 36 23 1_555 A SER 90 A SER 38 23 1_555 A SER 96 A SER 44 23 1_555 A GLN 106 A GLN 54 23 1_555 A HIS 107 A HIS 55 23 1_555 A PHE 108 A PHE 56 23 1_555 A LYS 109 A LYS 57 23 1_555 A LEU 120 A LEU 68 23 1_555 A TRP 121 A TRP 69 23 1_555 A GLU 152 A GLU 100 23 7_655 A VAL 154 A VAL 102 23 7_655 A PRO 158 A PRO 106 23 1_565 A THR 159 A THR 107 23 1_565 A TYR 160 A TYR 108 23 1_565 A HOH 322 G HOH 23 1_555 A HOH 354 G HOH 23 1_555 B HOH 101 H HOH 23 1_555 B HOH 102 H HOH 23 1_555 B HOH 103 H HOH 23 1_555 B HOH 104 H HOH 23 1_555 96 P 43 21 2