0.009547
0.000000
0.000000
0.000000
0.012572
0.000000
0.000000
0.000000
0.012706
0.00000
0.00000
0.00000
Baumlova, A.
Chalupska, D.
Boura, E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
104.744
79.539
78.704
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C10 H16 N5 O13 P3
507.181
ADENOSINE-5'-TRIPHOSPHATE
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
P
N
75
N
O
N
76
N
O
N
77
N
O
N
78
R
P
N
79
N
O
N
80
N
O
N
81
N
O
N
82
R
P
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
O
N
87
N
C
N
88
R
C
N
89
N
O
N
90
S
C
N
91
N
O
N
92
R
C
N
93
N
O
N
94
R
C
Y
95
N
N
Y
96
N
C
Y
97
N
N
Y
98
N
C
Y
99
N
C
N
100
N
N
Y
101
N
N
Y
102
N
C
Y
103
N
N
Y
104
N
C
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
N
N
122
R
C
N
123
N
C
N
124
N
O
N
125
N
C
N
126
N
S
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
N
N
136
S
C
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
C
N
141
N
C
N
142
N
O
N
143
N
N
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
N
N
156
S
C
N
157
N
C
N
158
N
O
N
159
N
C
N
160
N
C
N
161
N
C
N
162
N
O
N
163
N
O
N
164
N
O
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
N
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
O
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
Y
189
N
C
Y
190
N
N
Y
191
N
C
Y
192
N
C
Y
193
N
N
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
N
N
209
S
C
N
210
N
C
N
211
N
O
N
212
S
C
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
O
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
N
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
N
282
N
C
N
283
N
S
N
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
N
N
298
S
C
N
299
N
C
N
300
N
O
N
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
N
N
321
S
C
N
322
N
C
N
323
N
O
N
324
N
C
N
325
N
C
N
326
N
C
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
N
N
338
S
C
N
339
N
C
N
340
N
O
N
341
N
C
N
342
N
O
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
R
C
N
356
N
O
N
357
N
C
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
N
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
N
382
N
O
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
N
N
396
S
C
N
397
N
C
N
398
N
O
N
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
N
406
N
O
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
N
N
420
S
C
N
421
N
C
N
422
N
O
N
423
N
C
N
424
N
C
N
425
N
C
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
doub
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
Y
104
N
sing
Y
105
N
sing
Y
106
N
doub
N
107
N
sing
Y
108
N
sing
Y
109
N
sing
Y
110
N
doub
N
111
N
sing
Y
112
N
doub
N
113
N
sing
N
114
N
sing
Y
115
N
sing
Y
116
N
doub
N
117
N
sing
Y
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
Y
189
N
sing
Y
190
N
doub
Y
191
N
doub
N
192
N
sing
Y
193
N
sing
N
194
N
sing
Y
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
Y
297
N
doub
Y
298
N
sing
Y
299
N
sing
N
300
N
sing
Y
301
N
doub
N
302
N
sing
Y
303
N
doub
N
304
N
sing
Y
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
Y
366
N
doub
Y
367
N
sing
Y
368
N
sing
N
369
N
sing
Y
370
N
doub
Y
371
N
sing
Y
372
N
sing
N
373
N
sing
Y
374
N
sing
Y
375
N
doub
N
376
N
sing
Y
377
N
doub
N
378
N
sing
Y
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
doub
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
Y
394
N
doub
Y
395
N
sing
Y
396
N
sing
N
397
N
sing
Y
398
N
doub
N
399
N
sing
Y
400
N
doub
N
401
N
sing
Y
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
doub
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
UK
Embo Rep.
1469-3178
15
1085
1092
10.15252/embr.201438841
25168678
The crystal structure of the phosphatidylinositol 4-kinase II alpha.
2014
10.2210/pdb4pla/pdb
pdb_00004pla
100
1
CCD
2013-07-25
RAYONIX MX-225
SINGLE WAVELENGTH
M
x-ray
1
0.91841
1.0
14.2
BESSY
0.91841
SYNCHROTRON
BESSY BEAMLINE 14.2
63240.914
Chimera protein of Phosphatidylinositol 4-kinase type 2-alpha and Lysozyme
2.7.1.67,3.2.1.17
1
man
polymer
507.181
ADENOSINE-5'-TRIPHOSPHATE
2
syn
non-polymer
18.015
water
1
nat
water
Phosphatidylinositol 4-kinase type II-alpha
no
no
GAMGTVAAQAQALAAQAAAAAHAAQAHRERNEFPEDPEFEAVVRQAELAIERCIFPERIYQGSSGSYFVKDPQGRIIAVF
KPKNEEPYGHLNPKWTKWLQKGTGNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGV
ITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSR
WYNQTPNRAKRVITTFRTGTWDAYKNLGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVKSR
GKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDADYWLRRFEAEPLPENTNRQLLLQFERLVVLDYIIRNTDRGND
NWLIKYDCPMDSSSSRDTDWVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDPN
FVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQMPPVIVETARSHQRSSSESYTQS
GAMGTVAAQAQALAAQAAAAAHAAQAHRERNEFPEDPEFEAVVRQAELAIERCIFPERIYQGSSGSYFVKDPQGRIIAVF
KPKNEEPYGHLNPKWTKWLQKGTGNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGV
ITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSR
WYNQTPNRAKRVITTFRTGTWDAYKNLGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVKSR
GKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDADYWLRRFEAEPLPENTNRQLLLQFERLVVLDYIIRNTDRGND
NWLIKYDCPMDSSSSRDTDWVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDPN
FVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQMPPVIVETARSHQRSSSESYTQS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
101
PI4K2A
9606
Homo sapiens
469008
Escherichia coli
BL21 (DE3)
Star
plasmid
Biological sequence
sample
102
267
e, T4Tp126
10665
Enterobacteria phage T4
469008
Escherichia coli
BL21 (DE3)
Star
plasmid
Biological sequence
Human
sample
268
556
PI4K2A
9606
Homo sapiens
469008
Escherichia coli
BL21 (DE3)
Star
plasmid
Biological sequence
1
2.59
52.55
VAPOR DIFFUSION, SITTING DROP
8% PEG 4000, 150 mM (NH4)2SO4, 100 mM MES, pH = 6.5, 10 mM betaine
293
chem_comp_atom
chem_comp_bond
database_2
entity_src_gen
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
refine_hist
repository
Initial release
Database references
Derived calculations
Data collection
Database references
Derived calculations
Other
Refinement description
Source and taxonomy
1
0
2014-09-10
1
1
2014-10-15
1
2
2015-02-04
1
3
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_entity_src_gen.pdbx_alt_source_flag
_pdbx_database_status.pdb_format_compatible
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_oper_list.symmetry_operation
MarieCurie FP7-PEOPLE-2012-CIG
333916
N
RCSB
Y
RCSB
2014-05-16
REL
REL
ATP
ADENOSINE-5'-TRIPHOSPHATE
HOH
water
ATP
1
2
ATP
ATP
1201
A
ATP
2
2
ATP
ATP
1202
A
HOH
1
3
HOH
HOH
1301
A
n
1
72
A
n
2
73
A
n
3
74
A
n
4
75
A
n
5
76
A
n
6
77
A
n
7
78
A
n
8
79
A
n
9
80
A
n
10
81
A
n
11
82
A
n
12
83
A
n
13
84
A
n
14
85
A
n
15
86
A
n
16
87
A
n
17
88
A
n
18
89
A
n
19
90
A
n
20
91
A
n
21
92
A
n
22
93
A
n
23
94
A
n
24
95
A
n
25
96
A
n
26
97
A
n
27
98
A
n
28
99
A
n
29
100
A
ARG
101
n
30
ARG
101
A
ASN
102
n
31
ASN
102
A
GLU
103
n
32
GLU
103
A
PHE
104
n
33
PHE
104
A
PRO
105
n
34
PRO
105
A
GLU
106
n
35
GLU
106
A
ASP
107
n
36
ASP
107
A
PRO
108
n
37
PRO
108
A
GLU
109
n
38
GLU
109
A
PHE
110
n
39
PHE
110
A
GLU
111
n
40
GLU
111
A
ALA
112
n
41
ALA
112
A
VAL
113
n
42
VAL
113
A
VAL
114
n
43
VAL
114
A
ARG
115
n
44
ARG
115
A
GLN
116
n
45
GLN
116
A
ALA
117
n
46
ALA
117
A
GLU
118
n
47
GLU
118
A
LEU
119
n
48
LEU
119
A
ALA
120
n
49
ALA
120
A
ILE
121
n
50
ILE
121
A
GLU
122
n
51
GLU
122
A
ARG
123
n
52
ARG
123
A
CYS
124
n
53
CYS
124
A
ILE
125
n
54
ILE
125
A
PHE
126
n
55
PHE
126
A
PRO
127
n
56
PRO
127
A
GLU
128
n
57
GLU
128
A
ARG
129
n
58
ARG
129
A
ILE
130
n
59
ILE
130
A
TYR
131
n
60
TYR
131
A
GLN
132
n
61
GLN
132
A
GLY
133
n
62
GLY
133
A
SER
134
n
63
SER
134
A
SER
135
n
64
SER
135
A
GLY
136
n
65
GLY
136
A
SER
137
n
66
SER
137
A
TYR
138
n
67
TYR
138
A
PHE
139
n
68
PHE
139
A
VAL
140
n
69
VAL
140
A
LYS
141
n
70
LYS
141
A
ASP
142
n
71
ASP
142
A
PRO
143
n
72
PRO
143
A
GLN
144
n
73
GLN
144
A
GLY
145
n
74
GLY
145
A
ARG
146
n
75
ARG
146
A
ILE
147
n
76
ILE
147
A
ILE
148
n
77
ILE
148
A
ALA
149
n
78
ALA
149
A
VAL
150
n
79
VAL
150
A
PHE
151
n
80
PHE
151
A
LYS
152
n
81
LYS
152
A
PRO
153
n
82
PRO
153
A
LYS
154
n
83
LYS
154
A
ASN
155
n
84
ASN
155
A
GLU
156
n
85
GLU
156
A
GLU
157
n
86
GLU
157
A
PRO
158
n
87
PRO
158
A
TYR
159
n
88
TYR
159
A
GLY
160
n
89
GLY
160
A
HIS
161
n
90
HIS
161
A
LEU
162
n
91
LEU
162
A
ASN
163
n
92
ASN
163
A
PRO
164
n
93
PRO
164
A
LYS
165
n
94
LYS
165
A
TRP
166
n
95
TRP
166
A
THR
167
n
96
THR
167
A
LYS
168
n
97
LYS
168
A
TRP
169
n
98
TRP
169
A
LEU
170
n
99
LEU
170
A
GLN
171
n
100
GLN
171
A
LYS
172
n
101
LYS
172
A
GLY
1001
n
102
GLY
1001
A
THR
1002
n
103
THR
1002
A
GLY
1003
n
104
GLY
1003
A
ASN
1004
n
105
ASN
1004
A
ILE
1005
n
106
ILE
1005
A
PHE
1006
n
107
PHE
1006
A
GLU
1007
n
108
GLU
1007
A
MET
1008
n
109
MET
1008
A
LEU
1009
n
110
LEU
1009
A
ARG
1010
n
111
ARG
1010
A
ILE
1011
n
112
ILE
1011
A
ASP
1012
n
113
ASP
1012
A
GLU
1013
n
114
GLU
1013
A
GLY
1014
n
115
GLY
1014
A
LEU
1015
n
116
LEU
1015
A
ARG
1016
n
117
ARG
1016
A
LEU
1017
n
118
LEU
1017
A
LYS
1018
n
119
LYS
1018
A
ILE
1019
n
120
ILE
1019
A
TYR
1020
n
121
TYR
1020
A
LYS
1021
n
122
LYS
1021
A
ASP
1022
n
123
ASP
1022
A
THR
1023
n
124
THR
1023
A
GLU
1024
n
125
GLU
1024
A
GLY
1025
n
126
GLY
1025
A
TYR
1026
n
127
TYR
1026
A
TYR
1027
n
128
TYR
1027
A
THR
1028
n
129
THR
1028
A
ILE
1029
n
130
ILE
1029
A
GLY
1030
n
131
GLY
1030
A
ILE
1031
n
132
ILE
1031
A
GLY
1032
n
133
GLY
1032
A
HIS
1033
n
134
HIS
1033
A
LEU
1034
n
135
LEU
1034
A
LEU
1035
n
136
LEU
1035
A
THR
1036
n
137
THR
1036
A
LYS
1037
n
138
LYS
1037
A
SER
1038
n
139
SER
1038
A
PRO
1039
n
140
PRO
1039
A
SER
1040
n
141
SER
1040
A
LEU
1041
n
142
LEU
1041
A
ASN
1042
n
143
ASN
1042
A
ALA
1043
n
144
ALA
1043
A
ALA
1044
n
145
ALA
1044
A
LYS
1045
n
146
LYS
1045
A
SER
1046
n
147
SER
1046
A
GLU
1047
n
148
GLU
1047
A
LEU
1048
n
149
LEU
1048
A
ASP
1049
n
150
ASP
1049
A
LYS
1050
n
151
LYS
1050
A
ALA
1051
n
152
ALA
1051
A
ILE
1052
n
153
ILE
1052
A
GLY
1053
n
154
GLY
1053
A
ARG
1054
n
155
ARG
1054
A
ASN
1055
n
156
ASN
1055
A
THR
1056
n
157
THR
1056
A
ASN
1057
n
158
ASN
1057
A
GLY
1058
n
159
GLY
1058
A
VAL
1059
n
160
VAL
1059
A
ILE
1060
n
161
ILE
1060
A
THR
1061
n
162
THR
1061
A
LYS
1062
n
163
LYS
1062
A
ASP
1063
n
164
ASP
1063
A
GLU
1064
n
165
GLU
1064
A
ALA
1065
n
166
ALA
1065
A
GLU
1066
n
167
GLU
1066
A
LYS
1067
n
168
LYS
1067
A
LEU
1068
n
169
LEU
1068
A
PHE
1069
n
170
PHE
1069
A
ASN
1070
n
171
ASN
1070
A
GLN
1071
n
172
GLN
1071
A
ASP
1072
n
173
ASP
1072
A
VAL
1073
n
174
VAL
1073
A
ASP
1074
n
175
ASP
1074
A
ALA
1075
n
176
ALA
1075
A
ALA
1076
n
177
ALA
1076
A
VAL
1077
n
178
VAL
1077
A
ARG
1078
n
179
ARG
1078
A
GLY
1079
n
180
GLY
1079
A
ILE
1080
n
181
ILE
1080
A
LEU
1081
n
182
LEU
1081
A
ARG
1082
n
183
ARG
1082
A
ASN
1083
n
184
ASN
1083
A
ALA
1084
n
185
ALA
1084
A
LYS
1085
n
186
LYS
1085
A
LEU
1086
n
187
LEU
1086
A
LYS
1087
n
188
LYS
1087
A
PRO
1088
n
189
PRO
1088
A
VAL
1089
n
190
VAL
1089
A
TYR
1090
n
191
TYR
1090
A
ASP
1091
n
192
ASP
1091
A
SER
1092
n
193
SER
1092
A
LEU
1093
n
194
LEU
1093
A
ASP
1094
n
195
ASP
1094
A
ALA
1095
n
196
ALA
1095
A
VAL
1096
n
197
VAL
1096
A
ARG
1097
n
198
ARG
1097
A
ARG
1098
n
199
ARG
1098
A
ALA
1099
n
200
ALA
1099
A
ALA
1100
n
201
ALA
1100
A
LEU
1101
n
202
LEU
1101
A
ILE
1102
n
203
ILE
1102
A
ASN
1103
n
204
ASN
1103
A
MET
1104
n
205
MET
1104
A
VAL
1105
n
206
VAL
1105
A
PHE
1106
n
207
PHE
1106
A
GLN
1107
n
208
GLN
1107
A
MET
1108
n
209
MET
1108
A
GLY
1109
n
210
GLY
1109
A
GLU
1110
n
211
GLU
1110
A
THR
1111
n
212
THR
1111
A
GLY
1112
n
213
GLY
1112
A
VAL
1113
n
214
VAL
1113
A
ALA
1114
n
215
ALA
1114
A
GLY
1115
n
216
GLY
1115
A
PHE
1116
n
217
PHE
1116
A
THR
1117
n
218
THR
1117
A
ASN
1118
n
219
ASN
1118
A
SER
1119
n
220
SER
1119
A
LEU
1120
n
221
LEU
1120
A
ARG
1121
n
222
ARG
1121
A
MET
1122
n
223
MET
1122
A
LEU
1123
n
224
LEU
1123
A
GLN
1124
n
225
GLN
1124
A
GLN
1125
n
226
GLN
1125
A
LYS
1126
n
227
LYS
1126
A
ARG
1127
n
228
ARG
1127
A
TRP
1128
n
229
TRP
1128
A
ASP
1129
n
230
ASP
1129
A
GLU
1130
n
231
GLU
1130
A
ALA
1131
n
232
ALA
1131
A
ALA
1132
n
233
ALA
1132
A
VAL
1133
n
234
VAL
1133
A
ASN
1134
n
235
ASN
1134
A
LEU
1135
n
236
LEU
1135
A
ALA
1136
n
237
ALA
1136
A
LYS
1137
n
238
LYS
1137
A
SER
1138
n
239
SER
1138
A
ARG
1139
n
240
ARG
1139
A
TRP
1140
n
241
TRP
1140
A
TYR
1141
n
242
TYR
1141
A
ASN
1142
n
243
ASN
1142
A
GLN
1143
n
244
GLN
1143
A
THR
1144
n
245
THR
1144
A
PRO
1145
n
246
PRO
1145
A
ASN
1146
n
247
ASN
1146
A
ARG
1147
n
248
ARG
1147
A
ALA
1148
n
249
ALA
1148
A
LYS
1149
n
250
LYS
1149
A
ARG
1150
n
251
ARG
1150
A
VAL
1151
n
252
VAL
1151
A
ILE
1152
n
253
ILE
1152
A
THR
1153
n
254
THR
1153
A
THR
1154
n
255
THR
1154
A
PHE
1155
n
256
PHE
1155
A
ARG
1156
n
257
ARG
1156
A
THR
1157
n
258
THR
1157
A
GLY
1158
n
259
GLY
1158
A
THR
1159
n
260
THR
1159
A
TRP
1160
n
261
TRP
1160
A
ASP
1161
n
262
ASP
1161
A
ALA
1162
n
263
ALA
1162
A
TYR
1163
n
264
TYR
1163
A
LYS
1164
n
265
LYS
1164
A
ASN
1165
n
266
ASN
1165
A
LEU
1166
n
267
LEU
1166
A
GLY
180
n
268
GLY
180
A
ARG
181
n
269
ARG
181
A
ASP
182
n
270
ASP
182
A
CYS
183
n
271
CYS
183
A
LEU
184
n
272
LEU
184
A
VAL
185
n
273
VAL
185
A
LEU
186
n
274
LEU
186
A
ASN
187
n
275
ASN
187
A
GLN
188
n
276
GLN
188
A
GLY
189
n
277
GLY
189
A
TYR
190
n
278
TYR
190
A
LEU
191
n
279
LEU
191
A
SER
192
n
280
SER
192
A
GLU
193
n
281
GLU
193
A
ALA
194
n
282
ALA
194
A
GLY
195
n
283
GLY
195
A
ALA
196
n
284
ALA
196
A
SER
197
n
285
SER
197
A
LEU
198
n
286
LEU
198
A
VAL
199
n
287
VAL
199
A
ASP
200
n
288
ASP
200
A
GLN
201
n
289
GLN
201
A
LYS
202
n
290
LYS
202
A
LEU
203
n
291
LEU
203
A
GLU
204
n
292
GLU
204
A
LEU
205
n
293
LEU
205
A
ASN
206
n
294
ASN
206
A
ILE
207
n
295
ILE
207
A
VAL
208
n
296
VAL
208
A
PRO
209
n
297
PRO
209
A
ARG
210
n
298
ARG
210
A
THR
211
n
299
THR
211
A
LYS
212
n
300
LYS
212
A
VAL
213
n
301
VAL
213
A
VAL
214
n
302
VAL
214
A
TYR
215
n
303
TYR
215
A
LEU
216
n
304
LEU
216
A
ALA
217
n
305
ALA
217
A
SER
218
n
306
SER
218
A
GLU
219
n
307
GLU
219
A
THR
220
n
308
THR
220
A
PHE
221
n
309
PHE
221
A
ASN
222
n
310
ASN
222
A
TYR
223
n
311
TYR
223
A
SER
224
n
312
SER
224
A
ALA
225
n
313
ALA
225
A
ILE
226
n
314
ILE
226
A
ASP
227
n
315
ASP
227
A
ARG
228
n
316
ARG
228
A
VAL
229
n
317
VAL
229
A
LYS
230
n
318
LYS
230
A
SER
231
n
319
SER
231
A
ARG
232
n
320
ARG
232
A
n
321
233
A
n
322
234
A
n
323
235
A
n
324
236
A
n
325
237
A
n
326
238
A
n
327
239
A
n
328
240
A
n
329
241
A
n
330
242
A
n
331
243
A
n
332
244
A
n
333
245
A
n
334
246
A
n
335
247
A
n
336
248
A
n
337
249
A
n
338
250
A
ILE
251
n
339
ILE
251
A
GLY
252
n
340
GLY
252
A
LEU
253
n
341
LEU
253
A
PRO
254
n
342
PRO
254
A
PRO
255
n
343
PRO
255
A
LYS
256
n
344
LYS
256
A
VAL
257
n
345
VAL
257
A
GLY
258
n
346
GLY
258
A
SER
259
n
347
SER
259
A
PHE
260
n
348
PHE
260
A
GLN
261
n
349
GLN
261
A
LEU
262
n
350
LEU
262
A
PHE
263
n
351
PHE
263
A
VAL
264
n
352
VAL
264
A
GLU
265
n
353
GLU
265
A
GLY
266
n
354
GLY
266
A
TYR
267
n
355
TYR
267
A
LYS
268
n
356
LYS
268
A
ASP
269
n
357
ASP
269
A
ALA
270
n
358
ALA
270
A
ASP
271
n
359
ASP
271
A
TYR
272
n
360
TYR
272
A
TRP
273
n
361
TRP
273
A
LEU
274
n
362
LEU
274
A
ARG
275
n
363
ARG
275
A
ARG
276
n
364
ARG
276
A
PHE
277
n
365
PHE
277
A
GLU
278
n
366
GLU
278
A
ALA
279
n
367
ALA
279
A
GLU
280
n
368
GLU
280
A
PRO
281
n
369
PRO
281
A
LEU
282
n
370
LEU
282
A
PRO
283
n
371
PRO
283
A
GLU
284
n
372
GLU
284
A
ASN
285
n
373
ASN
285
A
THR
286
n
374
THR
286
A
ASN
287
n
375
ASN
287
A
ARG
288
n
376
ARG
288
A
GLN
289
n
377
GLN
289
A
LEU
290
n
378
LEU
290
A
LEU
291
n
379
LEU
291
A
LEU
292
n
380
LEU
292
A
GLN
293
n
381
GLN
293
A
PHE
294
n
382
PHE
294
A
GLU
295
n
383
GLU
295
A
ARG
296
n
384
ARG
296
A
LEU
297
n
385
LEU
297
A
VAL
298
n
386
VAL
298
A
VAL
299
n
387
VAL
299
A
LEU
300
n
388
LEU
300
A
ASP
301
n
389
ASP
301
A
TYR
302
n
390
TYR
302
A
ILE
303
n
391
ILE
303
A
ILE
304
n
392
ILE
304
A
ARG
305
n
393
ARG
305
A
ASN
306
n
394
ASN
306
A
THR
307
n
395
THR
307
A
ASP
308
n
396
ASP
308
A
ARG
309
n
397
ARG
309
A
GLY
310
n
398
GLY
310
A
ASN
311
n
399
ASN
311
A
ASP
312
n
400
ASP
312
A
ASN
313
n
401
ASN
313
A
TRP
314
n
402
TRP
314
A
LEU
315
n
403
LEU
315
A
ILE
316
n
404
ILE
316
A
LYS
317
n
405
LYS
317
A
TYR
318
n
406
TYR
318
A
ASP
319
n
407
ASP
319
A
n
408
320
A
n
409
321
A
n
410
322
A
n
411
323
A
n
412
324
A
n
413
325
A
n
414
326
A
n
415
327
A
n
416
328
A
n
417
329
A
n
418
330
A
ASP
331
n
419
ASP
331
A
TRP
332
n
420
TRP
332
A
VAL
333
n
421
VAL
333
A
VAL
334
n
422
VAL
334
A
VAL
335
n
423
VAL
335
A
LYS
336
n
424
LYS
336
A
GLU
337
n
425
GLU
337
A
PRO
338
n
426
PRO
338
A
VAL
339
n
427
VAL
339
A
ILE
340
n
428
ILE
340
A
LYS
341
n
429
LYS
341
A
VAL
342
n
430
VAL
342
A
ALA
343
n
431
ALA
343
A
ALA
344
n
432
ALA
344
A
ILE
345
n
433
ILE
345
A
ASP
346
n
434
ASP
346
A
ASN
347
n
435
ASN
347
A
GLY
348
n
436
GLY
348
A
LEU
349
n
437
LEU
349
A
ALA
350
n
438
ALA
350
A
PHE
351
n
439
PHE
351
A
PRO
352
n
440
PRO
352
A
LEU
353
n
441
LEU
353
A
LYS
354
n
442
LYS
354
A
HIS
355
n
443
HIS
355
A
PRO
356
n
444
PRO
356
A
ASP
357
n
445
ASP
357
A
SER
358
n
446
SER
358
A
TRP
359
n
447
TRP
359
A
ARG
360
n
448
ARG
360
A
ALA
361
n
449
ALA
361
A
TYR
362
n
450
TYR
362
A
PRO
363
n
451
PRO
363
A
PHE
364
n
452
PHE
364
A
TYR
365
n
453
TYR
365
A
TRP
366
n
454
TRP
366
A
ALA
367
n
455
ALA
367
A
TRP
368
n
456
TRP
368
A
LEU
369
n
457
LEU
369
A
PRO
370
n
458
PRO
370
A
GLN
371
n
459
GLN
371
A
ALA
372
n
460
ALA
372
A
LYS
373
n
461
LYS
373
A
VAL
374
n
462
VAL
374
A
PRO
375
n
463
PRO
375
A
PHE
376
n
464
PHE
376
A
SER
377
n
465
SER
377
A
GLN
378
n
466
GLN
378
A
GLU
379
n
467
GLU
379
A
ILE
380
n
468
ILE
380
A
LYS
381
n
469
LYS
381
A
ASP
382
n
470
ASP
382
A
LEU
383
n
471
LEU
383
A
ILE
384
n
472
ILE
384
A
LEU
385
n
473
LEU
385
A
PRO
386
n
474
PRO
386
A
LYS
387
n
475
LYS
387
A
ILE
388
n
476
ILE
388
A
SER
389
n
477
SER
389
A
ASP
390
n
478
ASP
390
A
PRO
391
n
479
PRO
391
A
ASN
392
n
480
ASN
392
A
PHE
393
n
481
PHE
393
A
VAL
394
n
482
VAL
394
A
LYS
395
n
483
LYS
395
A
ASP
396
n
484
ASP
396
A
LEU
397
n
485
LEU
397
A
GLU
398
n
486
GLU
398
A
GLU
399
n
487
GLU
399
A
ASP
400
n
488
ASP
400
A
LEU
401
n
489
LEU
401
A
TYR
402
n
490
TYR
402
A
GLU
403
n
491
GLU
403
A
LEU
404
n
492
LEU
404
A
PHE
405
n
493
PHE
405
A
LYS
406
n
494
LYS
406
A
LYS
407
n
495
LYS
407
A
ASP
408
n
496
ASP
408
A
PRO
409
n
497
PRO
409
A
GLY
410
n
498
GLY
410
A
PHE
411
n
499
PHE
411
A
ASP
412
n
500
ASP
412
A
ARG
413
n
501
ARG
413
A
GLY
414
n
502
GLY
414
A
GLN
415
n
503
GLN
415
A
PHE
416
n
504
PHE
416
A
HIS
417
n
505
HIS
417
A
LYS
418
n
506
LYS
418
A
GLN
419
n
507
GLN
419
A
ILE
420
n
508
ILE
420
A
ALA
421
n
509
ALA
421
A
VAL
422
n
510
VAL
422
A
MET
423
n
511
MET
423
A
ARG
424
n
512
ARG
424
A
GLY
425
n
513
GLY
425
A
GLN
426
n
514
GLN
426
A
ILE
427
n
515
ILE
427
A
LEU
428
n
516
LEU
428
A
ASN
429
n
517
ASN
429
A
LEU
430
n
518
LEU
430
A
THR
431
n
519
THR
431
A
GLN
432
n
520
GLN
432
A
ALA
433
n
521
ALA
433
A
LEU
434
n
522
LEU
434
A
LYS
435
n
523
LYS
435
A
ASP
436
n
524
ASP
436
A
ASN
437
n
525
ASN
437
A
LYS
438
n
526
LYS
438
A
SER
439
n
527
SER
439
A
PRO
440
n
528
PRO
440
A
LEU
441
n
529
LEU
441
A
HIS
442
n
530
HIS
442
A
LEU
443
n
531
LEU
443
A
VAL
444
n
532
VAL
444
A
GLN
445
n
533
GLN
445
A
MET
446
n
534
MET
446
A
PRO
447
n
535
PRO
447
A
PRO
448
n
536
PRO
448
A
VAL
449
n
537
VAL
449
A
ILE
450
n
538
ILE
450
A
VAL
451
n
539
VAL
451
A
GLU
452
n
540
GLU
452
A
THR
453
n
541
THR
453
A
n
542
454
A
n
543
455
A
n
544
456
A
n
545
457
A
n
546
458
A
n
547
459
A
n
548
460
A
n
549
461
A
n
550
462
A
n
551
463
A
n
552
464
A
n
553
465
A
n
554
466
A
n
555
467
A
n
556
468
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLU
128
A
N
GLU
57
A
O
PHE
139
A
O
PHE
68
A
N
VAL
140
A
N
VAL
69
A
O
ALA
149
A
O
ALA
78
A
N
VAL
150
A
N
VAL
79
A
O
GLN
261
A
O
GLN
349
A
O
LYS
256
A
O
LYS
344
A
N
LEU
216
A
N
LEU
304
A
N
TYR
1020
A
N
TYR
121
A
O
THR
1028
A
O
THR
129
A
N
TYR
1027
A
N
TYR
128
A
O
LEU
1035
A
O
LEU
136
A
N
LYS
268
A
N
LYS
356
A
O
ILE
316
A
O
ILE
404
A
N
LEU
315
A
N
LEU
403
A
O
ALA
343
A
O
ALA
431
1
A
CG
ARG
101
A
CG
ARG
30
1
Y
1
A
CD
ARG
101
A
CD
ARG
30
1
Y
1
A
NE
ARG
101
A
NE
ARG
30
1
Y
1
A
CZ
ARG
101
A
CZ
ARG
30
1
Y
1
A
NH1
ARG
101
A
NH1
ARG
30
1
Y
1
A
NH2
ARG
101
A
NH2
ARG
30
1
Y
1
A
CG
TYR
159
A
CG
TYR
88
1
Y
1
A
CD1
TYR
159
A
CD1
TYR
88
1
Y
1
A
CD2
TYR
159
A
CD2
TYR
88
1
Y
1
A
CE1
TYR
159
A
CE1
TYR
88
1
Y
1
A
CE2
TYR
159
A
CE2
TYR
88
1
Y
1
A
CZ
TYR
159
A
CZ
TYR
88
1
Y
1
A
OH
TYR
159
A
OH
TYR
88
1
Y
1
A
CG
ARG
1139
A
CG
ARG
240
1
Y
1
A
CD
ARG
1139
A
CD
ARG
240
1
Y
1
A
NE
ARG
1139
A
NE
ARG
240
1
Y
1
A
CZ
ARG
1139
A
CZ
ARG
240
1
Y
1
A
NH1
ARG
1139
A
NH1
ARG
240
1
Y
1
A
NH2
ARG
1139
A
NH2
ARG
240
1
Y
1
A
CG
LYS
1164
A
CG
LYS
265
1
Y
1
A
CD
LYS
1164
A
CD
LYS
265
1
Y
1
A
CE
LYS
1164
A
CE
LYS
265
1
Y
1
A
NZ
LYS
1164
A
NZ
LYS
265
1
Y
1
A
CG
ASN
1165
A
CG
ASN
266
1
Y
1
A
OD1
ASN
1165
A
OD1
ASN
266
1
Y
1
A
ND2
ASN
1165
A
ND2
ASN
266
1
Y
1
A
CG
LEU
1166
A
CG
LEU
267
1
Y
1
A
CD1
LEU
1166
A
CD1
LEU
267
1
Y
1
A
CD2
LEU
1166
A
CD2
LEU
267
1
Y
1
A
CG
ARG
181
A
CG
ARG
269
1
Y
1
A
CD
ARG
181
A
CD
ARG
269
1
Y
1
A
NE
ARG
181
A
NE
ARG
269
1
Y
1
A
CZ
ARG
181
A
CZ
ARG
269
1
Y
1
A
NH1
ARG
181
A
NH1
ARG
269
1
Y
1
A
NH2
ARG
181
A
NH2
ARG
269
1
Y
1
A
CG
LYS
336
A
CG
LYS
424
1
Y
1
A
CD
LYS
336
A
CD
LYS
424
1
Y
1
A
CE
LYS
336
A
CE
LYS
424
1
Y
1
A
NZ
LYS
336
A
NZ
LYS
424
1
Y
1
A
GLY
72
A
GLY
1
1
Y
1
A
ALA
73
A
ALA
2
1
Y
1
A
MET
74
A
MET
3
1
Y
1
A
GLY
75
A
GLY
4
1
Y
1
A
THR
76
A
THR
5
1
Y
1
A
VAL
77
A
VAL
6
1
Y
1
A
ALA
78
A
ALA
7
1
Y
1
A
ALA
79
A
ALA
8
1
Y
1
A
GLN
80
A
GLN
9
1
Y
1
A
ALA
81
A
ALA
10
1
Y
1
A
GLN
82
A
GLN
11
1
Y
1
A
ALA
83
A
ALA
12
1
Y
1
A
LEU
84
A
LEU
13
1
Y
1
A
ALA
85
A
ALA
14
1
Y
1
A
ALA
86
A
ALA
15
1
Y
1
A
GLN
87
A
GLN
16
1
Y
1
A
ALA
88
A
ALA
17
1
Y
1
A
ALA
89
A
ALA
18
1
Y
1
A
ALA
90
A
ALA
19
1
Y
1
A
ALA
91
A
ALA
20
1
Y
1
A
ALA
92
A
ALA
21
1
Y
1
A
HIS
93
A
HIS
22
1
Y
1
A
ALA
94
A
ALA
23
1
Y
1
A
ALA
95
A
ALA
24
1
Y
1
A
GLN
96
A
GLN
25
1
Y
1
A
ALA
97
A
ALA
26
1
Y
1
A
HIS
98
A
HIS
27
1
Y
1
A
ARG
99
A
ARG
28
1
Y
1
A
GLU
100
A
GLU
29
1
Y
1
A
GLY
233
A
GLY
321
1
Y
1
A
LYS
234
A
LYS
322
1
Y
1
A
ARG
235
A
ARG
323
1
Y
1
A
LEU
236
A
LEU
324
1
Y
1
A
ALA
237
A
ALA
325
1
Y
1
A
LEU
238
A
LEU
326
1
Y
1
A
GLU
239
A
GLU
327
1
Y
1
A
LYS
240
A
LYS
328
1
Y
1
A
VAL
241
A
VAL
329
1
Y
1
A
PRO
242
A
PRO
330
1
Y
1
A
LYS
243
A
LYS
331
1
Y
1
A
VAL
244
A
VAL
332
1
Y
1
A
GLY
245
A
GLY
333
1
Y
1
A
GLN
246
A
GLN
334
1
Y
1
A
ARG
247
A
ARG
335
1
Y
1
A
PHE
248
A
PHE
336
1
Y
1
A
ASN
249
A
ASN
337
1
Y
1
A
ARG
250
A
ARG
338
1
Y
1
A
CYS
320
A
CYS
408
1
Y
1
A
PRO
321
A
PRO
409
1
Y
1
A
MET
322
A
MET
410
1
Y
1
A
ASP
323
A
ASP
411
1
Y
1
A
SER
324
A
SER
412
1
Y
1
A
SER
325
A
SER
413
1
Y
1
A
SER
326
A
SER
414
1
Y
1
A
SER
327
A
SER
415
1
Y
1
A
ARG
328
A
ARG
416
1
Y
1
A
ASP
329
A
ASP
417
1
Y
1
A
THR
330
A
THR
418
1
Y
1
A
ALA
454
A
ALA
542
1
Y
1
A
ARG
455
A
ARG
543
1
Y
1
A
SER
456
A
SER
544
1
Y
1
A
HIS
457
A
HIS
545
1
Y
1
A
GLN
458
A
GLN
546
1
Y
1
A
ARG
459
A
ARG
547
1
Y
1
A
SER
460
A
SER
548
1
Y
1
A
SER
461
A
SER
549
1
Y
1
A
SER
462
A
SER
550
1
Y
1
A
GLU
463
A
GLU
551
1
Y
1
A
SER
464
A
SER
552
1
Y
1
A
TYR
465
A
TYR
553
1
Y
1
A
THR
466
A
THR
554
1
Y
1
A
GLN
467
A
GLN
555
1
Y
1
A
SER
468
A
SER
556
1
Y
1
A
A
OE1
NH2
GLU
ARG
398
424
2.00
1
A
A
NZ
OD1
LYS
ASP
354
357
2.08
1
A
A
OE2
NH1
GLU
ARG
1013
1147
2.10
1
A
A
O
OG
ARG
SER
228
231
2.13
1
A
A
O
ND2
LEU
ASN
162
222
2.14
1
A
A
OG
O2B
SER
ATP
137
1202
2.17
1
A
A
OD1
NH1
ASP
ARG
1012
1150
2.17
1
A
A
NH2
OE2
ARG
GLU
1078
379
2.00
1_555
1_556
1
A
LYS
1126
79.65
-1.27
1
A
TYR
1141
73.51
-52.35
1
A
ARG
181
-87.67
-76.00
1
A
LYS
354
177.70
164.72
0.2511
0.2115
0.2135
2.771
36.838
810
16189
5.00
93.65
0.35
Random
1
FREE R-VALUE
1.36
MOLECULAR REPLACEMENT
27.61
0.90
1.11
ML
FLAT BULK SOLVENT MODEL
2.771
36.838
1
3951
62
0
3888
0.013
4043
1.421
5494
17.326
1512
0.095
594
0.009
700
0.3350
0.2668
2.9444
133
2536
94.00
0.3362
0.2616
3.1716
135
2553
95.00
0.2991
0.2300
3.4906
135
2564
95.00
0.2736
0.1953
3.9952
134
2541
94.00
0.1731
0.1852
5.0315
134
2563
93.00
0.2282
0.2030
36.8412
139
2622
91.00
2.77
36.84
4PLA
16256
0.159
1
23.81
5.8
93.87
refinement
PHENIX
(phenix.refine: 1.8_1069)
Crystal structure of phosphatidyl inositol 4-kinase II alpha in complex with ATP
1
N
N
2
N
N
2
N
N
3
N
N
A
ASP
107
A
ASP
36
HELX_P
A
ARG
123
A
ARG
52
1
AA1
17
A
ASN
155
A
ASN
84
HELX_P
A
GLU
157
A
GLU
86
5
AA2
3
A
ASN
163
A
ASN
92
HELX_P
A
GLY
1001
A
GLY
102
1
AA3
11
A
ASN
1004
A
ASN
105
HELX_P
A
GLY
1014
A
GLY
115
1
AA4
11
A
SER
1040
A
SER
141
HELX_P
A
GLY
1053
A
GLY
154
1
AA5
14
A
THR
1061
A
THR
162
HELX_P
A
ARG
1082
A
ARG
183
1
AA6
22
A
LYS
1085
A
LYS
186
HELX_P
A
LEU
1093
A
LEU
194
1
AA7
9
A
ASP
1094
A
ASP
195
HELX_P
A
MET
1108
A
MET
209
1
AA8
15
A
MET
1108
A
MET
209
HELX_P
A
ALA
1114
A
ALA
215
1
AA9
7
A
PHE
1116
A
PHE
217
HELX_P
A
LYS
1126
A
LYS
227
1
AB1
11
A
ARG
1127
A
ARG
228
HELX_P
A
LEU
1135
A
LEU
236
1
AB2
9
A
SER
1138
A
SER
239
HELX_P
A
GLN
1143
A
GLN
244
1
AB3
6
A
THR
1144
A
THR
245
HELX_P
A
THR
1157
A
THR
258
1
AB4
14
A
TRP
1160
A
TRP
261
HELX_P
A
LYS
1164
A
LYS
265
5
AB5
5
A
GLN
188
A
GLN
276
HELX_P
A
GLU
204
A
GLU
292
1
AB6
17
A
SER
224
A
SER
312
HELX_P
A
SER
231
A
SER
319
1
AB7
8
A
ALA
270
A
ALA
358
HELX_P
A
GLU
280
A
GLU
368
1
AB8
11
A
PRO
283
A
PRO
371
HELX_P
A
ARG
305
A
ARG
393
1
AB9
23
A
PHE
364
A
PHE
452
HELX_P
A
VAL
374
A
VAL
462
5
AC1
11
A
SER
377
A
SER
465
HELX_P
A
SER
389
A
SER
477
1
AC2
13
A
ASP
390
A
ASP
478
HELX_P
A
LYS
406
A
LYS
494
1
AC3
17
A
ASP
412
A
ASP
500
HELX_P
A
ASP
436
A
ASP
524
1
AC4
25
A
SER
439
A
SER
527
HELX_P
A
MET
446
A
MET
534
1
AC5
8
TRANSFERASE,HYDROLASE
phosphatidyl inositol, 4-kinase, ATP, lipid, TRANSFERASE, HYDROLASE
A
LEU
1166
A
LEU
267
1
A
GLY
180
A
GLY
268
-8.89
P4K2A_HUMAN
UNP
1
76
Q9BTU6
TVAAQAQALAAQAAAAAHAAQAHRERNEFPEDPEFEAVVRQAELAIERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKN
EEPYGHLNPKWTKWLQK
D9IEF7_BPT4
UNP
1
2
D9IEF7
NIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILRN
AKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAY
KNL
P4K2A_HUMAN
UNP
1
180
Q9BTU6
GRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGS
FQLFVEGYKDADYWLRRFEAEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTDWVVVKEPV
IKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDPNFVKDLEEDLYELFKKDPGFDRGQFHKQ
IAVMRGQILNLTQALKDNKSPLHLVQMPPVIVETARSHQRSSSESYTQS
76
172
4PLA
76
172
Q9BTU6
A
1
5
101
2
164
4PLA
1004
1166
D9IEF7
A
2
105
267
180
468
4PLA
180
468
Q9BTU6
A
3
268
556
1
expression tag
GLY
72
4PLA
A
Q9BTU6
UNP
1
1
expression tag
ALA
73
4PLA
A
Q9BTU6
UNP
2
1
expression tag
MET
74
4PLA
A
Q9BTU6
UNP
3
1
expression tag
GLY
75
4PLA
A
Q9BTU6
UNP
4
1
linker
GLY
1001
4PLA
A
Q9BTU6
UNP
102
1
linker
THR
1002
4PLA
A
Q9BTU6
UNP
103
1
linker
GLY
1003
4PLA
A
Q9BTU6
UNP
104
2
CYS
engineered mutation
THR
1056
4PLA
A
D9IEF7
UNP
54
157
2
CYS
engineered mutation
ALA
1099
4PLA
A
D9IEF7
UNP
97
200
5
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
128
A
GLU
57
A
ARG
129
A
ARG
58
A
TYR
138
A
TYR
67
A
LYS
141
A
LYS
70
A
ILE
147
A
ILE
76
A
PRO
153
A
PRO
82
A
LYS
256
A
LYS
344
A
LEU
262
A
LEU
350
A
THR
211
A
THR
299
A
LEU
216
A
LEU
304
A
ARG
1016
A
ARG
117
A
LYS
1021
A
LYS
122
A
TYR
1027
A
TYR
128
A
GLY
1030
A
GLY
131
A
HIS
1033
A
HIS
134
A
THR
1036
A
THR
137
A
TYR
267
A
TYR
355
A
ASP
269
A
ASP
357
A
TRP
314
A
TRP
402
A
TYR
318
A
TYR
406
A
ILE
340
A
ILE
428
A
ALA
344
A
ALA
432
binding site for residue ATP A 1201
A
ATP
1201
Software
8
binding site for residue ATP A 1202
A
ATP
1202
Software
13
A
TRP
359
A
TRP
447
8
1_555
A
ARG
360
A
ARG
448
8
1_555
A
PRO
363
A
PRO
451
8
1_555
A
PHE
364
A
PHE
452
8
1_555
A
ALA
367
A
ALA
455
8
1_555
A
TRP
368
A
TRP
456
8
1_555
A
VAL
444
A
VAL
532
8
1_555
A
GLN
445
A
GLN
533
8
1_555
A
GLN
132
A
GLN
61
13
1_555
A
GLY
133
A
GLY
62
13
1_555
A
SER
134
A
SER
63
13
1_555
A
SER
137
A
SER
66
13
1_555
A
VAL
150
A
VAL
79
13
1_555
A
LYS
152
A
LYS
81
13
1_555
A
GLN
261
A
GLN
349
13
1_555
A
LEU
262
A
LEU
350
13
1_555
A
PHE
263
A
PHE
351
13
1_555
A
VAL
264
A
VAL
352
13
1_555
A
ILE
345
A
ILE
433
13
1_555
A
ASP
346
A
ASP
434
13
1_555
A
HOH
1301
D
HOH
13
1_555
18
P 21 21 2