0.009456
0.000000
0.000000
0.000000
0.009456
0.000000
0.000000
0.000000
0.006552
0.00000
0.00000
0.00000
Epling, L.B.
Grace, C.R.
Lowe, B.R.
Partridge, J.F.
Enemark, E.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
105.755
105.755
152.633
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
S
P
N
6
N
O
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
C
N
11
R
C
N
12
N
O
N
13
S
C
N
14
N
O
N
15
R
C
N
16
N
O
N
17
R
C
Y
18
N
N
Y
19
N
C
Y
20
N
N
Y
21
N
C
Y
22
N
C
N
23
N
N
Y
24
N
N
Y
25
N
C
Y
26
N
N
Y
27
N
C
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
O
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
C
N
62
N
C
N
63
N
N
N
64
N
C
N
65
N
N
N
66
N
N
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
N
N
84
S
C
N
85
N
C
N
86
N
O
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
R
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
S
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
N
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
S
C
N
152
N
C
N
153
N
O
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
O
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
Y
184
N
C
Y
185
N
N
Y
186
N
C
Y
187
N
C
Y
188
N
N
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
N
N
201
S
C
N
202
N
C
N
203
N
O
N
204
S
C
N
205
N
C
N
206
N
C
N
207
N
C
N
208
N
O
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
N
N
223
S
C
N
224
N
C
N
225
N
O
N
226
N
C
N
227
N
C
N
228
N
C
N
229
N
C
N
230
N
O
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
C
N
251
N
C
N
252
N
N
N
253
N
O
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
N
C
N
274
N
C
N
275
N
S
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
N
N
290
S
C
N
291
N
C
N
292
N
O
N
293
N
C
Y
294
N
C
Y
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
P
N
313
N
O
N
314
N
O
N
315
N
O
N
316
N
O
N
317
N
N
N
318
S
C
N
319
N
C
N
320
N
O
N
321
N
C
N
322
N
C
N
323
N
C
N
324
N
O
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
N
C
N
339
N
O
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
R
C
N
353
N
O
N
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
N
N
366
S
C
N
367
N
C
N
368
N
O
N
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
N
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
N
403
N
O
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
N
421
N
C
N
422
N
C
N
423
N
O
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
Y
30
N
sing
Y
31
N
sing
Y
32
N
doub
N
33
N
sing
Y
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
doub
N
39
N
sing
N
40
N
sing
Y
41
N
sing
Y
42
N
doub
N
43
N
sing
Y
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
Y
184
N
sing
Y
185
N
doub
Y
186
N
doub
N
187
N
sing
Y
188
N
sing
N
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
doub
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
doub
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
Y
290
N
doub
Y
291
N
sing
Y
292
N
sing
N
293
N
sing
Y
294
N
doub
N
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
doub
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
Y
363
N
doub
Y
364
N
sing
Y
365
N
sing
N
366
N
sing
Y
367
N
doub
Y
368
N
sing
Y
369
N
sing
N
370
N
sing
Y
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
Y
391
N
doub
Y
392
N
sing
Y
393
N
sing
N
394
N
sing
Y
395
N
doub
N
396
N
sing
Y
397
N
doub
N
398
N
sing
Y
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
doub
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
427
1779
1796
10.1016/j.jmb.2015.02.015
25724843
Cancer-Associated Mutants of RNA Helicase DDX3X Are Defective in RNA-Stimulated ATP Hydrolysis.
2015
10.2210/pdb4pxa/pdb
pdb_00004pxa
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2013-03-21
MARMOSAIC 300 mm CCD
Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
22-ID
APS
1.0
SYNCHROTRON
APS BEAMLINE 22-ID
52690.891
ATP-dependent RNA helicase DDX3X
3.6.4.13
D1-D2, UNP residues 135-582
D354V
1
man
polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
94.971
PHOSPHATE ION
5
syn
non-polymer
DEAD box protein 3, X-chromosomal, DEAD box, X isoform, Helicase-like protein 2, HLP2
no
no
MGSSHHHHHHSSGLVPRGSDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNI
ELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPT
RELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLVM
GFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLL
NATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVIN
FDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKG
MGSSHHHHHHSSGLVPRGSDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNI
ELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPT
RELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLVM
GFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLL
NATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVIN
FDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
DBX, DDX3, DDX3X
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3)-RIPL
PLASMID
pLE230
1
4.06
69.68
VAPOR DIFFUSION, HANGING DROP
1.66 M NaH2PO4
0.24 M K2HPO4, VAPOR DIFFUSION, HANGING DROP, temperature 291.0K
291.0
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2015-03-11
1
1
2015-04-29
1
2
2023-09-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
DDX3X wild-type D1
RCSB
Y
RCSB
2014-03-22
REL
REL
ADP
ADENOSINE-5'-DIPHOSPHATE
PO4
PHOSPHATE ION
4PX9
PDB ENTRIES 4PX9 AND 2JGN
PDB
experimental model
2JGN
PDB ENTRIES 4PX9 AND 2JGN
PDB
experimental model
ADP
601
2
ADP
ADP
601
A
PO4
1
3
PO4
PO4
602
A
PO4
2
3
PO4
PO4
603
A
PO4
3
3
PO4
PO4
604
A
PO4
4
3
PO4
PO4
605
A
PO4
5
3
PO4
PO4
606
A
n
1
116
A
n
2
117
A
n
3
118
A
n
4
119
A
n
5
120
A
n
6
121
A
n
7
122
A
n
8
123
A
n
9
124
A
n
10
125
A
n
11
126
A
n
12
127
A
n
13
128
A
n
14
129
A
n
15
130
A
n
16
131
A
n
17
132
A
n
18
133
A
n
19
134
A
ASP
135
n
20
ASP
135
A
TRP
136
n
21
TRP
136
A
SER
137
n
22
SER
137
A
LYS
138
n
23
LYS
138
A
PRO
139
n
24
PRO
139
A
LEU
140
n
25
LEU
140
A
PRO
141
n
26
PRO
141
A
PRO
142
n
27
PRO
142
A
SER
143
n
28
SER
143
A
GLU
144
n
29
GLU
144
A
ARG
145
n
30
ARG
145
A
LEU
146
n
31
LEU
146
A
GLU
147
n
32
GLU
147
A
GLN
148
n
33
GLN
148
A
GLU
149
n
34
GLU
149
A
LEU
150
n
35
LEU
150
A
PHE
151
n
36
PHE
151
A
SER
152
n
37
SER
152
A
GLY
153
n
38
GLY
153
A
GLY
154
n
39
GLY
154
A
ASN
155
n
40
ASN
155
A
THR
156
n
41
THR
156
A
GLY
157
n
42
GLY
157
A
ILE
158
n
43
ILE
158
A
ASN
159
n
44
ASN
159
A
PHE
160
n
45
PHE
160
A
GLU
161
n
46
GLU
161
A
LYS
162
n
47
LYS
162
A
TYR
163
n
48
TYR
163
A
ASP
164
n
49
ASP
164
A
ASP
165
n
50
ASP
165
A
ILE
166
n
51
ILE
166
A
PRO
167
n
52
PRO
167
A
VAL
168
n
53
VAL
168
A
GLU
169
n
54
GLU
169
A
ALA
170
n
55
ALA
170
A
THR
171
n
56
THR
171
A
GLY
172
n
57
GLY
172
A
ASN
173
n
58
ASN
173
A
ASN
174
n
59
ASN
174
A
CYS
175
n
60
CYS
175
A
PRO
176
n
61
PRO
176
A
PRO
177
n
62
PRO
177
A
HIS
178
n
63
HIS
178
A
ILE
179
n
64
ILE
179
A
GLU
180
n
65
GLU
180
A
SER
181
n
66
SER
181
A
PHE
182
n
67
PHE
182
A
SER
183
n
68
SER
183
A
ASP
184
n
69
ASP
184
A
VAL
185
n
70
VAL
185
A
GLU
186
n
71
GLU
186
A
MET
187
n
72
MET
187
A
GLY
188
n
73
GLY
188
A
GLU
189
n
74
GLU
189
A
ILE
190
n
75
ILE
190
A
ILE
191
n
76
ILE
191
A
MET
192
n
77
MET
192
A
GLY
193
n
78
GLY
193
A
ASN
194
n
79
ASN
194
A
ILE
195
n
80
ILE
195
A
GLU
196
n
81
GLU
196
A
LEU
197
n
82
LEU
197
A
THR
198
n
83
THR
198
A
ARG
199
n
84
ARG
199
A
TYR
200
n
85
TYR
200
A
THR
201
n
86
THR
201
A
ARG
202
n
87
ARG
202
A
PRO
203
n
88
PRO
203
A
THR
204
n
89
THR
204
A
PRO
205
n
90
PRO
205
A
VAL
206
n
91
VAL
206
A
GLN
207
n
92
GLN
207
A
LYS
208
n
93
LYS
208
A
HIS
209
n
94
HIS
209
A
ALA
210
n
95
ALA
210
A
ILE
211
n
96
ILE
211
A
PRO
212
n
97
PRO
212
A
ILE
213
n
98
ILE
213
A
ILE
214
n
99
ILE
214
A
LYS
215
n
100
LYS
215
A
GLU
216
n
101
GLU
216
A
LYS
217
n
102
LYS
217
A
ARG
218
n
103
ARG
218
A
ASP
219
n
104
ASP
219
A
LEU
220
n
105
LEU
220
A
MET
221
n
106
MET
221
A
ALA
222
n
107
ALA
222
A
CYS
223
n
108
CYS
223
A
ALA
224
n
109
ALA
224
A
GLN
225
n
110
GLN
225
A
THR
226
n
111
THR
226
A
GLY
227
n
112
GLY
227
A
SER
228
n
113
SER
228
A
GLY
229
n
114
GLY
229
A
LYS
230
n
115
LYS
230
A
THR
231
n
116
THR
231
A
ALA
232
n
117
ALA
232
A
ALA
233
n
118
ALA
233
A
PHE
234
n
119
PHE
234
A
LEU
235
n
120
LEU
235
A
LEU
236
n
121
LEU
236
A
PRO
237
n
122
PRO
237
A
ILE
238
n
123
ILE
238
A
LEU
239
n
124
LEU
239
A
SER
240
n
125
SER
240
A
GLN
241
n
126
GLN
241
A
ILE
242
n
127
ILE
242
A
TYR
243
n
128
TYR
243
A
SER
244
n
129
SER
244
A
ASP
245
n
130
ASP
245
A
GLY
246
n
131
GLY
246
A
PRO
247
n
132
PRO
247
A
GLY
248
n
133
GLY
248
A
GLU
249
n
134
GLU
249
A
ALA
250
n
135
ALA
250
A
LEU
251
n
136
LEU
251
A
ARG
252
n
137
ARG
252
A
ALA
253
n
138
ALA
253
A
MET
254
n
139
MET
254
A
LYS
255
n
140
LYS
255
A
GLU
256
n
141
GLU
256
A
ASN
257
n
142
ASN
257
A
GLY
258
n
143
GLY
258
A
ARG
259
n
144
ARG
259
A
TYR
260
n
145
TYR
260
A
GLY
261
n
146
GLY
261
A
ARG
262
n
147
ARG
262
A
ARG
263
n
148
ARG
263
A
LYS
264
n
149
LYS
264
A
GLN
265
n
150
GLN
265
A
TYR
266
n
151
TYR
266
A
PRO
267
n
152
PRO
267
A
ILE
268
n
153
ILE
268
A
SER
269
n
154
SER
269
A
LEU
270
n
155
LEU
270
A
VAL
271
n
156
VAL
271
A
LEU
272
n
157
LEU
272
A
ALA
273
n
158
ALA
273
A
PRO
274
n
159
PRO
274
A
THR
275
n
160
THR
275
A
ARG
276
n
161
ARG
276
A
GLU
277
n
162
GLU
277
A
LEU
278
n
163
LEU
278
A
ALA
279
n
164
ALA
279
A
VAL
280
n
165
VAL
280
A
GLN
281
n
166
GLN
281
A
ILE
282
n
167
ILE
282
A
TYR
283
n
168
TYR
283
A
GLU
284
n
169
GLU
284
A
GLU
285
n
170
GLU
285
A
ALA
286
n
171
ALA
286
A
ARG
287
n
172
ARG
287
A
LYS
288
n
173
LYS
288
A
PHE
289
n
174
PHE
289
A
SER
290
n
175
SER
290
A
TYR
291
n
176
TYR
291
A
ARG
292
n
177
ARG
292
A
SER
293
n
178
SER
293
A
ARG
294
n
179
ARG
294
A
VAL
295
n
180
VAL
295
A
ARG
296
n
181
ARG
296
A
PRO
297
n
182
PRO
297
A
CYS
298
n
183
CYS
298
A
VAL
299
n
184
VAL
299
A
VAL
300
n
185
VAL
300
A
TYR
301
n
186
TYR
301
A
GLY
302
n
187
GLY
302
A
GLY
303
n
188
GLY
303
A
ALA
304
n
189
ALA
304
A
ASP
305
n
190
ASP
305
A
ILE
306
n
191
ILE
306
A
GLY
307
n
192
GLY
307
A
GLN
308
n
193
GLN
308
A
GLN
309
n
194
GLN
309
A
ILE
310
n
195
ILE
310
A
ARG
311
n
196
ARG
311
A
ASP
312
n
197
ASP
312
A
LEU
313
n
198
LEU
313
A
GLU
314
n
199
GLU
314
A
ARG
315
n
200
ARG
315
A
GLY
316
n
201
GLY
316
A
CYS
317
n
202
CYS
317
A
HIS
318
n
203
HIS
318
A
LEU
319
n
204
LEU
319
A
LEU
320
n
205
LEU
320
A
VAL
321
n
206
VAL
321
A
ALA
322
n
207
ALA
322
A
THR
323
n
208
THR
323
A
PRO
324
n
209
PRO
324
A
GLY
325
n
210
GLY
325
A
ARG
326
n
211
ARG
326
A
LEU
327
n
212
LEU
327
A
VAL
328
n
213
VAL
328
A
ASP
329
n
214
ASP
329
A
MET
330
n
215
MET
330
A
MET
331
n
216
MET
331
A
GLU
332
n
217
GLU
332
A
ARG
333
n
218
ARG
333
A
GLY
334
n
219
GLY
334
A
LYS
335
n
220
LYS
335
A
ILE
336
n
221
ILE
336
A
GLY
337
n
222
GLY
337
A
LEU
338
n
223
LEU
338
A
ASP
339
n
224
ASP
339
A
PHE
340
n
225
PHE
340
A
CYS
341
n
226
CYS
341
A
LYS
342
n
227
LYS
342
A
TYR
343
n
228
TYR
343
A
LEU
344
n
229
LEU
344
A
VAL
345
n
230
VAL
345
A
LEU
346
n
231
LEU
346
A
ASP
347
n
232
ASP
347
A
GLU
348
n
233
GLU
348
A
ALA
349
n
234
ALA
349
A
ASP
350
n
235
ASP
350
A
ARG
351
n
236
ARG
351
A
MET
352
n
237
MET
352
A
LEU
353
n
238
LEU
353
A
VAL
354
n
239
VAL
354
A
MET
355
n
240
MET
355
A
GLY
356
n
241
GLY
356
A
PHE
357
n
242
PHE
357
A
GLU
358
n
243
GLU
358
A
PRO
359
n
244
PRO
359
A
GLN
360
n
245
GLN
360
A
ILE
361
n
246
ILE
361
A
ARG
362
n
247
ARG
362
A
ARG
363
n
248
ARG
363
A
ILE
364
n
249
ILE
364
A
VAL
365
n
250
VAL
365
A
GLU
366
n
251
GLU
366
A
GLN
367
n
252
GLN
367
A
ASP
368
n
253
ASP
368
A
THR
369
n
254
THR
369
A
MET
370
n
255
MET
370
A
PRO
371
n
256
PRO
371
A
PRO
372
n
257
PRO
372
A
LYS
373
n
258
LYS
373
A
GLY
374
n
259
GLY
374
A
VAL
375
n
260
VAL
375
A
ARG
376
n
261
ARG
376
A
HIS
377
n
262
HIS
377
A
THR
378
n
263
THR
378
A
MET
379
n
264
MET
379
A
MET
380
n
265
MET
380
A
PHE
381
n
266
PHE
381
A
SER
382
n
267
SER
382
A
ALA
383
n
268
ALA
383
A
THR
384
n
269
THR
384
A
PHE
385
n
270
PHE
385
A
PRO
386
n
271
PRO
386
A
LYS
387
n
272
LYS
387
A
GLU
388
n
273
GLU
388
A
ILE
389
n
274
ILE
389
A
GLN
390
n
275
GLN
390
A
MET
391
n
276
MET
391
A
LEU
392
n
277
LEU
392
A
ALA
393
n
278
ALA
393
A
ARG
394
n
279
ARG
394
A
ASP
395
n
280
ASP
395
A
PHE
396
n
281
PHE
396
A
LEU
397
n
282
LEU
397
A
ASP
398
n
283
ASP
398
A
GLU
399
n
284
GLU
399
A
TYR
400
n
285
TYR
400
A
ILE
401
n
286
ILE
401
A
PHE
402
n
287
PHE
402
A
LEU
403
n
288
LEU
403
A
ALA
404
n
289
ALA
404
A
VAL
405
n
290
VAL
405
A
GLY
406
n
291
GLY
406
A
ARG
407
n
292
ARG
407
A
VAL
408
n
293
VAL
408
A
GLY
409
n
294
GLY
409
A
SER
410
n
295
SER
410
A
THR
411
n
296
THR
411
A
SER
412
n
297
SER
412
A
GLU
413
n
298
GLU
413
A
ASN
414
n
299
ASN
414
A
ILE
415
n
300
ILE
415
A
THR
416
n
301
THR
416
A
GLN
417
n
302
GLN
417
A
LYS
418
n
303
LYS
418
A
VAL
419
n
304
VAL
419
A
VAL
420
n
305
VAL
420
A
TRP
421
n
306
TRP
421
A
VAL
422
n
307
VAL
422
A
GLU
423
n
308
GLU
423
A
GLU
424
n
309
GLU
424
A
SER
425
n
310
SER
425
A
ASP
426
n
311
ASP
426
A
LYS
427
n
312
LYS
427
A
ARG
428
n
313
ARG
428
A
SER
429
n
314
SER
429
A
PHE
430
n
315
PHE
430
A
LEU
431
n
316
LEU
431
A
LEU
432
n
317
LEU
432
A
ASP
433
n
318
ASP
433
A
LEU
434
n
319
LEU
434
A
LEU
435
n
320
LEU
435
A
ASN
436
n
321
ASN
436
A
ALA
437
n
322
ALA
437
A
THR
438
n
323
THR
438
A
GLY
439
n
324
GLY
439
A
LYS
440
n
325
LYS
440
A
ASP
441
n
326
ASP
441
A
SER
442
n
327
SER
442
A
LEU
443
n
328
LEU
443
A
THR
444
n
329
THR
444
A
LEU
445
n
330
LEU
445
A
VAL
446
n
331
VAL
446
A
PHE
447
n
332
PHE
447
A
VAL
448
n
333
VAL
448
A
GLU
449
n
334
GLU
449
A
THR
450
n
335
THR
450
A
LYS
451
n
336
LYS
451
A
LYS
452
n
337
LYS
452
A
GLY
453
n
338
GLY
453
A
ALA
454
n
339
ALA
454
A
ASP
455
n
340
ASP
455
A
SER
456
n
341
SER
456
A
LEU
457
n
342
LEU
457
A
GLU
458
n
343
GLU
458
A
ASP
459
n
344
ASP
459
A
PHE
460
n
345
PHE
460
A
LEU
461
n
346
LEU
461
A
TYR
462
n
347
TYR
462
A
HIS
463
n
348
HIS
463
A
GLU
464
n
349
GLU
464
A
GLY
465
n
350
GLY
465
A
TYR
466
n
351
TYR
466
A
ALA
467
n
352
ALA
467
A
CYS
468
n
353
CYS
468
A
THR
469
n
354
THR
469
A
SER
470
n
355
SER
470
A
ILE
471
n
356
ILE
471
A
HIS
472
n
357
HIS
472
A
GLY
473
n
358
GLY
473
A
ASP
474
n
359
ASP
474
A
ARG
475
n
360
ARG
475
A
SER
476
n
361
SER
476
A
GLN
477
n
362
GLN
477
A
ARG
478
n
363
ARG
478
A
ASP
479
n
364
ASP
479
A
ARG
480
n
365
ARG
480
A
GLU
481
n
366
GLU
481
A
GLU
482
n
367
GLU
482
A
ALA
483
n
368
ALA
483
A
LEU
484
n
369
LEU
484
A
HIS
485
n
370
HIS
485
A
GLN
486
n
371
GLN
486
A
PHE
487
n
372
PHE
487
A
ARG
488
n
373
ARG
488
A
SER
489
n
374
SER
489
A
GLY
490
n
375
GLY
490
A
LYS
491
n
376
LYS
491
A
SER
492
n
377
SER
492
A
PRO
493
n
378
PRO
493
A
ILE
494
n
379
ILE
494
A
LEU
495
n
380
LEU
495
A
VAL
496
n
381
VAL
496
A
ALA
497
n
382
ALA
497
A
THR
498
n
383
THR
498
A
ALA
499
n
384
ALA
499
A
VAL
500
n
385
VAL
500
A
ALA
501
n
386
ALA
501
A
ALA
502
n
387
ALA
502
A
ARG
503
n
388
ARG
503
A
GLY
504
n
389
GLY
504
A
LEU
505
n
390
LEU
505
A
ASP
506
n
391
ASP
506
A
ILE
507
n
392
ILE
507
A
SER
508
n
393
SER
508
A
ASN
509
n
394
ASN
509
A
VAL
510
n
395
VAL
510
A
LYS
511
n
396
LYS
511
A
HIS
512
n
397
HIS
512
A
VAL
513
n
398
VAL
513
A
ILE
514
n
399
ILE
514
A
ASN
515
n
400
ASN
515
A
PHE
516
n
401
PHE
516
A
ASP
517
n
402
ASP
517
A
LEU
518
n
403
LEU
518
A
PRO
519
n
404
PRO
519
A
SER
520
n
405
SER
520
A
ASP
521
n
406
ASP
521
A
ILE
522
n
407
ILE
522
A
GLU
523
n
408
GLU
523
A
GLU
524
n
409
GLU
524
A
TYR
525
n
410
TYR
525
A
VAL
526
n
411
VAL
526
A
HIS
527
n
412
HIS
527
A
ARG
528
n
413
ARG
528
A
ILE
529
n
414
ILE
529
A
GLY
530
n
415
GLY
530
A
ARG
531
n
416
ARG
531
A
THR
532
n
417
THR
532
A
GLY
533
n
418
GLY
533
A
ARG
534
n
419
ARG
534
A
VAL
535
n
420
VAL
535
A
GLY
536
n
421
GLY
536
A
ASN
537
n
422
ASN
537
A
LEU
538
n
423
LEU
538
A
GLY
539
n
424
GLY
539
A
LEU
540
n
425
LEU
540
A
ALA
541
n
426
ALA
541
A
THR
542
n
427
THR
542
A
SER
543
n
428
SER
543
A
PHE
544
n
429
PHE
544
A
PHE
545
n
430
PHE
545
A
ASN
546
n
431
ASN
546
A
GLU
547
n
432
GLU
547
A
ARG
548
n
433
ARG
548
A
ASN
549
n
434
ASN
549
A
ILE
550
n
435
ILE
550
A
ASN
551
n
436
ASN
551
A
ILE
552
n
437
ILE
552
A
THR
553
n
438
THR
553
A
LYS
554
n
439
LYS
554
A
ASP
555
n
440
ASP
555
A
LEU
556
n
441
LEU
556
A
LEU
557
n
442
LEU
557
A
ASP
558
n
443
ASP
558
A
LEU
559
n
444
LEU
559
A
LEU
560
n
445
LEU
560
A
VAL
561
n
446
VAL
561
A
GLU
562
n
447
GLU
562
A
ALA
563
n
448
ALA
563
A
LYS
564
n
449
LYS
564
A
GLN
565
n
450
GLN
565
A
GLU
566
n
451
GLU
566
A
VAL
567
n
452
VAL
567
A
PRO
568
n
453
PRO
568
A
SER
569
n
454
SER
569
A
TRP
570
n
455
TRP
570
A
LEU
571
n
456
LEU
571
A
GLU
572
n
457
GLU
572
A
ASN
573
n
458
ASN
573
A
MET
574
n
459
MET
574
A
ALA
575
n
460
ALA
575
A
TYR
576
n
461
TYR
576
A
n
462
577
A
n
463
578
A
n
464
579
A
n
465
580
A
n
466
581
A
n
467
582
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLU
169
A
N
GLU
54
A
O
ALA
404
A
O
ALA
289
A
O
LEU
403
A
O
LEU
288
A
N
CYS
223
A
N
CYS
108
A
N
ALA
222
A
N
ALA
107
A
O
MET
380
A
O
MET
265
A
O
HIS
377
A
O
HIS
262
A
N
LEU
344
A
N
LEU
229
A
O
VAL
345
A
O
VAL
230
A
N
LEU
272
A
N
LEU
157
A
N
VAL
271
A
N
VAL
156
A
O
ALA
322
A
O
ALA
207
A
O
VAL
321
A
O
VAL
206
A
N
CYS
298
A
N
CYS
183
A
N
THR
416
A
N
THR
301
A
O
ALA
541
A
O
ALA
426
A
O
THR
542
A
O
THR
427
A
N
ASN
515
A
N
ASN
400
A
O
HIS
512
A
O
HIS
397
A
N
LEU
445
A
N
LEU
330
A
N
VAL
446
A
N
VAL
331
A
O
LEU
495
A
O
LEU
380
A
O
VAL
496
A
O
VAL
381
A
N
THR
469
A
N
THR
354
1
A
CG
ARG
259
A
CG
ARG
144
1
Y
1
A
CD
ARG
259
A
CD
ARG
144
1
Y
1
A
NE
ARG
259
A
NE
ARG
144
1
Y
1
A
CZ
ARG
259
A
CZ
ARG
144
1
Y
1
A
NH1
ARG
259
A
NH1
ARG
144
1
Y
1
A
NH2
ARG
259
A
NH2
ARG
144
1
Y
1
A
MET
116
A
MET
1
1
Y
1
A
GLY
117
A
GLY
2
1
Y
1
A
SER
118
A
SER
3
1
Y
1
A
SER
119
A
SER
4
1
Y
1
A
HIS
120
A
HIS
5
1
Y
1
A
HIS
121
A
HIS
6
1
Y
1
A
HIS
122
A
HIS
7
1
Y
1
A
HIS
123
A
HIS
8
1
Y
1
A
HIS
124
A
HIS
9
1
Y
1
A
HIS
125
A
HIS
10
1
Y
1
A
SER
126
A
SER
11
1
Y
1
A
SER
127
A
SER
12
1
Y
1
A
GLY
128
A
GLY
13
1
Y
1
A
LEU
129
A
LEU
14
1
Y
1
A
VAL
130
A
VAL
15
1
Y
1
A
PRO
131
A
PRO
16
1
Y
1
A
ARG
132
A
ARG
17
1
Y
1
A
GLY
133
A
GLY
18
1
Y
1
A
SER
134
A
SER
19
1
Y
1
A
GLU
577
A
GLU
462
1
Y
1
A
HIS
578
A
HIS
463
1
Y
1
A
HIS
579
A
HIS
464
1
Y
1
A
TYR
580
A
TYR
465
1
Y
1
A
LYS
581
A
LYS
466
1
Y
1
A
GLY
582
A
GLY
467
1
Y
1
A
PRO
142
-60.62
-176.25
1
A
ASN
155
54.27
1.26
1
A
ASN
159
-61.10
84.92
1
A
ASN
174
30.56
45.83
1
A
HIS
178
-48.43
173.70
1
A
PHE
182
-56.46
-7.93
1
A
GLU
186
-63.15
99.91
1
A
LEU
197
-48.65
-8.60
1
A
THR
226
-41.63
155.75
1
A
ALA
253
-78.30
40.05
1
A
MET
254
-140.46
-18.87
1
A
ARG
259
-81.00
47.62
1
A
ARG
262
-141.71
59.01
1
A
ARG
263
-73.70
-89.53
1
A
ARG
292
70.43
42.41
1
A
HIS
318
-148.40
-29.42
1
A
PRO
324
-26.25
-64.72
1
A
MET
355
-68.47
25.66
1
A
VAL
365
-65.61
-74.35
1
A
ASP
368
-129.72
-168.99
1
A
THR
369
-63.92
1.66
1
A
VAL
405
-113.30
62.77
1
A
LYS
440
35.51
-1.88
1
A
ARG
475
-43.85
153.31
1
A
SER
489
-77.06
28.22
1
A
LYS
491
-14.75
-47.22
1
A
VAL
500
-48.81
-70.55
1
A
ALA
501
-32.12
-34.72
1
A
ARG
503
-51.17
103.43
1
A
ASN
509
83.65
37.86
1
A
ARG
531
-49.78
-10.39
1
A
VAL
535
-23.57
136.00
1
A
ALA
563
-68.07
1.70
protein_rep.param
protein.top
dna-rna_rep.param
dna-rna.top
water_rep.param
water.top
ion.param
ion.top
carbohydrate.param
carbohydrate.top
adp.param
adp.top
97.1
-0.96
0.00
0.00
-0.96
0.00
1.92
BULK SOLVENT MODEL USED
0.271
0.010
0.206
0.206
3.20
45.85
718
14843
4.8
99.8
RANDOM
1825880.70
0.000000
1
GROUP
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRIES 4PX9 AND 2JGN
Engh & Huber
FLAT MODEL
73.1176
0.33
0.48
0.34
5.00
0.63
0.47
3.20
45.85
0
3547
52
0
3495
0.008
1.5
22.4
0.86
1
NONE
1
X-RAY DIFFRACTION
0.377
0.041
0.282
3.31
83
1338
10
5.8
98.5
3.20
50
4PXA
14996
14993
-3.0
0.128
1
37.19
14.0
100.0
0.641
3.20
3.31
5.71
1451
1
14.6
100
data collection
SERGUI
phasing
PHASER
refinement
CNS
1.3
data reduction
HKL-2000
data scaling
HKL-2000
DEAD-box RNA helicase DDX3X Cancer-associated mutant D354V
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
A
SER
143
A
SER
28
HELX_P
A
PHE
151
A
PHE
36
1
1
9
A
MET
187
A
MET
72
HELX_P
A
THR
198
A
THR
83
1
2
12
A
THR
204
A
THR
89
HELX_P
A
GLU
216
A
GLU
101
1
3
13
A
GLY
229
A
GLY
114
HELX_P
A
GLY
246
A
GLY
131
1
4
18
A
GLY
248
A
GLY
133
HELX_P
A
GLU
256
A
GLU
141
1
5
9
A
THR
275
A
THR
160
HELX_P
A
SER
290
A
SER
175
1
6
16
A
ASP
305
A
ASP
190
HELX_P
A
ARG
315
A
ARG
200
1
7
11
A
THR
323
A
THR
208
HELX_P
A
ARG
333
A
ARG
218
1
8
11
A
GLU
348
A
GLU
233
HELX_P
A
MET
355
A
MET
240
1
9
8
A
PHE
357
A
PHE
242
HELX_P
A
GLU
366
A
GLU
251
1
10
10
A
PRO
386
A
PRO
271
HELX_P
A
LEU
397
A
LEU
282
1
11
12
A
ASP
426
A
ASP
311
HELX_P
A
GLY
439
A
GLY
324
1
12
14
A
THR
450
A
THR
335
HELX_P
A
GLU
464
A
GLU
349
1
13
15
A
SER
476
A
SER
361
HELX_P
A
SER
489
A
SER
374
1
14
14
A
ALA
499
A
ALA
384
HELX_P
A
ARG
503
A
ARG
388
1
15
5
A
ASP
521
A
ASP
406
HELX_P
A
GLY
530
A
GLY
415
1
16
10
A
ASN
546
A
ASN
431
HELX_P
A
ASN
551
A
ASN
436
5
17
6
A
ILE
552
A
ILE
437
HELX_P
A
ALA
563
A
ALA
448
1
18
12
A
PRO
568
A
PRO
453
HELX_P
A
MET
574
A
MET
459
1
19
7
TRANSLATION, RNA BINDING PROTEIN
DEAD-box helicase, HYDROLASE, TRANSLATION, RNA BINDING PROTEIN
DDX3X_HUMAN
UNP
1
135
O00571
DWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPII
KEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSR
VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKG
VRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGA
DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR
VGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKG
135
582
4PXA
135
582
O00571
A
1
20
467
1
expression tag
MET
116
4PXA
A
O00571
UNP
1
1
expression tag
GLY
117
4PXA
A
O00571
UNP
2
1
expression tag
SER
118
4PXA
A
O00571
UNP
3
1
expression tag
SER
119
4PXA
A
O00571
UNP
4
1
expression tag
HIS
120
4PXA
A
O00571
UNP
5
1
expression tag
HIS
121
4PXA
A
O00571
UNP
6
1
expression tag
HIS
122
4PXA
A
O00571
UNP
7
1
expression tag
HIS
123
4PXA
A
O00571
UNP
8
1
expression tag
HIS
124
4PXA
A
O00571
UNP
9
1
expression tag
HIS
125
4PXA
A
O00571
UNP
10
1
expression tag
SER
126
4PXA
A
O00571
UNP
11
1
expression tag
SER
127
4PXA
A
O00571
UNP
12
1
expression tag
GLY
128
4PXA
A
O00571
UNP
13
1
expression tag
LEU
129
4PXA
A
O00571
UNP
14
1
expression tag
VAL
130
4PXA
A
O00571
UNP
15
1
expression tag
PRO
131
4PXA
A
O00571
UNP
16
1
expression tag
ARG
132
4PXA
A
O00571
UNP
17
1
expression tag
GLY
133
4PXA
A
O00571
UNP
18
1
expression tag
SER
134
4PXA
A
O00571
UNP
19
1
ASP
engineered mutation
VAL
354
4PXA
A
O00571
UNP
354
239
8
6
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
GLU
169
A
GLU
54
A
THR
171
A
THR
56
A
ILE
401
A
ILE
286
A
ALA
404
A
ALA
289
A
LEU
220
A
LEU
105
A
CYS
223
A
CYS
108
A
HIS
377
A
HIS
262
A
PHE
381
A
PHE
266
A
TYR
343
A
TYR
228
A
ASP
347
A
ASP
232
A
SER
269
A
SER
154
A
LEU
272
A
LEU
157
A
LEU
319
A
LEU
204
A
ALA
322
A
ALA
207
A
PRO
297
A
PRO
182
A
VAL
299
A
VAL
184
A
ILE
415
A
ILE
300
A
TRP
421
A
TRP
306
A
GLY
539
A
GLY
424
A
PHE
545
A
PHE
430
A
HIS
512
A
HIS
397
A
ASN
515
A
ASN
400
A
THR
444
A
THR
329
A
VAL
448
A
VAL
333
A
ILE
494
A
ILE
379
A
THR
498
A
THR
383
A
CYS
468
A
CYS
353
A
SER
470
A
SER
355
BINDING SITE FOR RESIDUE ADP A 601
A
ADP
601
Software
12
BINDING SITE FOR RESIDUE PO4 A 602
A
PO4
602
Software
7
BINDING SITE FOR RESIDUE PO4 A 603
A
PO4
603
Software
5
BINDING SITE FOR RESIDUE PO4 A 604
A
PO4
604
Software
4
BINDING SITE FOR RESIDUE PO4 A 605
A
PO4
605
Software
7
BINDING SITE FOR RESIDUE PO4 A 606
A
PO4
606
Software
4
A
THR
156
A
THR
41
12
1_555
A
ILE
158
A
ILE
43
12
1_555
A
TYR
200
A
TYR
85
12
1_555
A
ARG
202
A
ARG
87
12
1_555
A
PRO
203
A
PRO
88
12
1_555
A
THR
204
A
THR
89
12
1_555
A
GLN
207
A
GLN
92
12
1_555
A
THR
226
A
THR
111
12
1_555
A
GLY
227
A
GLY
112
12
1_555
A
GLY
229
A
GLY
114
12
1_555
A
LYS
230
A
LYS
115
12
1_555
A
THR
231
A
THR
116
12
1_555
A
GLY
302
A
GLY
187
7
1_555
A
THR
323
A
THR
208
7
1_555
A
GLY
325
A
GLY
210
7
1_555
A
ARG
326
A
ARG
211
7
1_555
A
PHE
357
A
PHE
242
7
1_555
A
GLN
477
A
GLN
362
7
1_555
A
PO4
604
E
PO4
7
1_555
A
LYS
264
A
LYS
149
5
6_545
A
TYR
266
A
TYR
151
5
6_545
A
ASP
339
A
ASP
224
5
6_545
A
SER
569
A
SER
454
5
1_555
A
TRP
570
A
TRP
455
5
1_555
A
ARG
326
A
ARG
211
4
1_555
A
ASP
329
A
ASP
214
4
1_555
A
PO4
602
C
PO4
4
1_555
A
PO4
605
F
PO4
4
1_555
A
GLY
302
A
GLY
187
7
1_555
A
GLY
303
A
GLY
188
7
1_555
A
ARG
326
A
ARG
211
7
1_555
A
SER
476
A
SER
361
7
1_555
A
GLN
477
A
GLN
362
7
1_555
A
ARG
478
A
ARG
363
7
1_555
A
PO4
604
E
PO4
7
1_555
A
LYS
217
A
LYS
102
4
1_555
A
LYS
342
A
LYS
227
4
1_555
A
HIS
377
A
HIS
262
4
1_555
A
ASP
426
A
ASP
311
4
6_445
96
P 43 21 2