0.012437 0.007180 0.000000 0.000000 0.014361 0.000000 0.000000 0.000000 0.009428 0.00000 0.00000 0.00000 Decroos, C. Bowman, C.B. Moser, J.-A.S. Christianson, K.E. Deardorff, M.A. Christianson, D.W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 80.406 80.406 106.063 C2 H4 O 44.053 ACETYL GROUP non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C8 H16 N2 O3 188.224 n N(6)-ACETYLLYSINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking K 1 39.098 POTASSIUM ION non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C10 H9 N O2 175.184 7-AMINO-4-METHYL-CHROMEN-2-ONE 7-AMINO-4-METHYLCOUMARIN non-polymer C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N C N 2 N O N 3 N C N 4 N H N 5 N H N 6 N H N 7 N H N 8 N N N 9 S C N 10 N C N 11 N O N 12 N C N 13 N O N 14 N H N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N O N 22 N C N 23 N C N 24 N N N 25 N C N 26 N C N 27 N C N 28 N C N 29 S C N 30 N N N 31 N C N 32 N O N 33 N O N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N N N 51 S C N 52 N C N 53 N O N 54 N C N 55 N C N 56 N C N 57 N N N 58 N C N 59 N N N 60 N N N 61 N O N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N N N 78 S C N 79 N C N 80 N O N 81 N C N 82 N C N 83 N O N 84 N N N 85 N O N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N O N 101 N O N 102 N O N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N N N 111 R C N 112 N C N 113 N O N 114 N C N 115 N S N 116 N O N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N N N 125 S C N 126 N C N 127 N O N 128 N C N 129 N C N 130 N C N 131 N O N 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 S C N 146 N C N 147 N O N 148 N C N 149 N C N 150 N C N 151 N O N 152 N O N 153 N O N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N N N 164 N C N 165 N C N 166 N O N 167 N O N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N C N 174 N O N 175 N C N 176 N O N 177 N C N 178 N O N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N N N 188 S C N 189 N C N 190 N O N 191 N C Y 192 N C Y 193 N N Y 194 N C Y 195 N C Y 196 N N N 197 N O N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N O N 209 N H N 210 N H N 211 N N N 212 S C N 213 N C N 214 N O N 215 S C N 216 N C N 217 N C N 218 N C N 219 N O N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N K N 234 N N N 235 S C N 236 N C N 237 N O N 238 N C N 239 N C N 240 N C N 241 N C N 242 N O N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N N N 257 S C N 258 N C N 259 N O N 260 N C N 261 N C N 262 N C N 263 N C N 264 N N N 265 N O N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N Y 282 N C Y 283 N C Y 284 N C Y 285 N C Y 286 N C Y 287 N C Y 288 N C Y 289 N C Y 290 N C N 291 N C Y 292 N O N 293 N O N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N N N 304 S C N 305 N C N 306 N O N 307 N C N 308 N C N 309 N S N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C Y 332 N C Y 333 N C N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N N N 347 S C N 348 N C N 349 N O N 350 N C N 351 N C N 352 N C N 353 N O N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N N N 364 S C N 365 N C N 366 N O N 367 N C N 368 N O N 369 N O N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N N N 378 S C N 379 N C N 380 N O N 381 R C N 382 N O N 383 N C N 384 N O N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N N Y 403 N C Y 404 N C Y 405 N C Y 406 N C Y 407 N C N 408 N O N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N N N 422 S C N 423 N C N 424 N O N 425 N C Y 426 N C Y 427 N C Y 428 N C Y 429 N C Y 430 N C Y 431 N C N 432 N O N 433 N O N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N N N 446 S C N 447 N C N 448 N O N 449 N C N 450 N C N 451 N C N 452 N O N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N ZN N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N doub N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N doub N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N doub N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N doub N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N doub N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing Y 187 N sing Y 188 N doub Y 189 N doub N 190 N sing Y 191 N sing N 192 N sing Y 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N doub N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N doub N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing Y 268 N doub Y 269 N sing Y 270 N sing N 271 N sing Y 272 N doub Y 273 N sing Y 274 N sing Y 275 N sing N 276 N doub Y 277 N doub N 278 N sing Y 279 N sing N 280 N sing Y 281 N sing Y 282 N doub N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N doub N 314 N sing N 315 N sing N 316 N sing N 317 N sing Y 318 N doub Y 319 N sing Y 320 N sing N 321 N sing Y 322 N doub N 323 N sing Y 324 N doub N 325 N sing Y 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N doub N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N doub N 383 N sing N 384 N sing N 385 N sing N 386 N sing Y 387 N doub Y 388 N sing Y 389 N sing N 390 N sing Y 391 N doub Y 392 N sing Y 393 N sing N 394 N sing Y 395 N sing Y 396 N doub N 397 N sing Y 398 N doub N 399 N sing Y 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N doub N 411 N sing N 412 N sing N 413 N sing N 414 N sing Y 415 N doub Y 416 N sing Y 417 N sing N 418 N sing Y 419 N doub N 420 N sing Y 421 N doub N 422 N sing Y 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N doub N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing US Acs Chem.Biol. 1554-8929 9 2157 2164 10.1021/cb5003762 25075551 Compromised Structure and Function of HDAC8 Mutants Identified in Cornelia de Lange Syndrome Spectrum Disorders. 2014 10.2210/pdb4qa7/pdb pdb_00004qa7 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirrors CCD 2013-08-13 ADSC QUANTUM 315r Si(111) SINGLE WAVELENGTH M x-ray 1 1.075 1.0 X29A NSLS 1.075 SYNCHROTRON NSLS BEAMLINE X29A 43235.043 Histone deacetylase 8 3.5.1.98 1 man polymer 679.811 tetrapeptide substrate 1 syn polymer 65.409 ZINC ION 1 syn non-polymer 39.098 POTASSIUM ION 2 syn non-polymer 175.184 7-AMINO-4-METHYL-CHROMEN-2-ONE 1 syn non-polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 49 nat water HD8 no no MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQ KVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVL GILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY YQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGFNLANTARCWTYLTG VILGKTLSSEIPDREFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVVIEGRGSHHHHHH MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQ KVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVL GILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY YQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGFNLANTARCWTYLTG VILGKTLSSEIPDREFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVVIEGRGSHHHHHH A polypeptide(L) no yes (ACE)RH(ALY)(ALY) XRHKK B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample HDAC8, HDACL1, CDA07 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) plasmid pHD2-Xa-His 1 2.25 45.42 VAPOR DIFFUSION, SITTING DROP 8.0 0.1 M tris(hydroxymethyl)aminomethane) (TRIS, pH = 8.0), 4 mM tris(2-carboxyethyl)phosphine (TCEP), 17.5% PEG 400, VAPOR DIFFUSION, SITTING DROP, temperature 294K 294 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond struct_conn repository Initial release Database references Data collection Database references Derived calculations Refinement description Data collection Derived calculations 1 0 2014-08-06 1 1 2014-10-01 1 2 2023-09-20 1 3 2023-12-06 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _chem_comp_atom.atom_id _chem_comp_bond.atom_id_2 _struct_conn.pdbx_leaving_atom_flag RCSB Y RCSB 2014-05-02 REL REL ZN ZINC ION K POTASSIUM ION MCM 7-AMINO-4-METHYL-CHROMEN-2-ONE GOL GLYCEROL HOH water synthetic peptide sample 3EWF PDB ENTRY 3EWF PDB experimental model ZN 401 3 ZN ZN 401 A K 411 4 K K 402 A K 412 4 K K 403 A MCM 506 5 MCM MCM 601 B GOL 201 6 GOL GOL 602 B HOH 1 7 HOH HOH 501 A HOH 2 7 HOH HOH 502 A HOH 3 7 HOH HOH 503 A HOH 4 7 HOH HOH 504 A HOH 5 7 HOH HOH 505 A HOH 6 7 HOH HOH 506 A HOH 7 7 HOH HOH 507 A HOH 8 7 HOH HOH 508 A HOH 9 7 HOH HOH 509 A HOH 10 7 HOH HOH 510 A HOH 11 7 HOH HOH 511 A HOH 12 7 HOH HOH 512 A HOH 13 7 HOH HOH 513 A HOH 14 7 HOH HOH 514 A HOH 15 7 HOH HOH 515 A HOH 16 7 HOH HOH 516 A HOH 17 7 HOH HOH 517 A HOH 18 7 HOH HOH 518 A HOH 19 7 HOH HOH 519 A HOH 20 7 HOH HOH 520 A HOH 21 7 HOH HOH 521 A HOH 22 7 HOH HOH 522 A HOH 23 7 HOH HOH 523 A HOH 24 7 HOH HOH 524 A HOH 25 7 HOH HOH 525 A HOH 26 7 HOH HOH 526 A HOH 27 7 HOH HOH 527 A HOH 28 7 HOH HOH 528 A HOH 29 7 HOH HOH 529 A HOH 30 7 HOH HOH 530 A HOH 31 7 HOH HOH 531 A HOH 32 7 HOH HOH 532 A HOH 33 7 HOH HOH 533 A HOH 34 7 HOH HOH 534 A HOH 36 7 HOH HOH 535 A HOH 37 7 HOH HOH 536 A HOH 39 7 HOH HOH 537 A HOH 40 7 HOH HOH 538 A HOH 41 7 HOH HOH 539 A HOH 42 7 HOH HOH 540 A HOH 43 7 HOH HOH 541 A HOH 44 7 HOH HOH 542 A HOH 45 7 HOH HOH 543 A HOH 47 7 HOH HOH 544 A HOH 48 7 HOH HOH 545 A HOH 49 7 HOH HOH 546 A HOH 35 7 HOH HOH 701 B HOH 38 7 HOH HOH 702 B HOH 46 7 HOH HOH 703 B n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A n 10 10 A n 11 11 A n 12 12 A SER 13 n 13 SER 13 A LEU 14 n 14 LEU 14 A VAL 15 n 15 VAL 15 A PRO 16 n 16 PRO 16 A VAL 17 n 17 VAL 17 A TYR 18 n 18 TYR 18 A ILE 19 n 19 ILE 19 A TYR 20 n 20 TYR 20 A SER 21 n 21 SER 21 A PRO 22 n 22 PRO 22 A GLU 23 n 23 GLU 23 A TYR 24 n 24 TYR 24 A VAL 25 n 25 VAL 25 A SER 26 n 26 SER 26 A MET 27 n 27 MET 27 A CYS 28 n 28 CYS 28 A ASP 29 n 29 ASP 29 A SER 30 n 30 SER 30 A LEU 31 n 31 LEU 31 A ALA 32 n 32 ALA 32 A LYS 33 n 33 LYS 33 A ILE 34 n 34 ILE 34 A PRO 35 n 35 PRO 35 A LYS 36 n 36 LYS 36 A ARG 37 n 37 ARG 37 A ALA 38 n 38 ALA 38 A SER 39 n 39 SER 39 A MET 40 n 40 MET 40 A VAL 41 n 41 VAL 41 A HIS 42 n 42 HIS 42 A SER 43 n 43 SER 43 A LEU 44 n 44 LEU 44 A ILE 45 n 45 ILE 45 A GLU 46 n 46 GLU 46 A ALA 47 n 47 ALA 47 A TYR 48 n 48 TYR 48 A ALA 49 n 49 ALA 49 A LEU 50 n 50 LEU 50 A HIS 51 n 51 HIS 51 A LYS 52 n 52 LYS 52 A GLN 53 n 53 GLN 53 A MET 54 n 54 MET 54 A ARG 55 n 55 ARG 55 A ILE 56 n 56 ILE 56 A VAL 57 n 57 VAL 57 A LYS 58 n 58 LYS 58 A PRO 59 n 59 PRO 59 A LYS 60 n 60 LYS 60 A VAL 61 n 61 VAL 61 A ALA 62 n 62 ALA 62 A SER 63 n 63 SER 63 A MET 64 n 64 MET 64 A GLU 65 n 65 GLU 65 A GLU 66 n 66 GLU 66 A MET 67 n 67 MET 67 A ALA 68 n 68 ALA 68 A THR 69 n 69 THR 69 A PHE 70 n 70 PHE 70 A HIS 71 n 71 HIS 71 A THR 72 n 72 THR 72 A ASP 73 n 73 ASP 73 A ALA 74 n 74 ALA 74 A TYR 75 n 75 TYR 75 A LEU 76 n 76 LEU 76 A GLN 77 n 77 GLN 77 A HIS 78 n 78 HIS 78 A LEU 79 n 79 LEU 79 A GLN 80 n 80 GLN 80 A LYS 81 n 81 LYS 81 A VAL 82 n 82 VAL 82 A SER 83 n 83 SER 83 A GLN 84 n 84 GLN 84 A GLU 85 n 85 GLU 85 A GLY 86 n 86 GLY 86 A ASP 87 n 87 ASP 87 A ASP 88 n 88 ASP 88 A ASP 89 n 89 ASP 89 A HIS 90 n 90 HIS 90 A PRO 91 n 91 PRO 91 A ASP 92 n 92 ASP 92 A SER 93 n 93 SER 93 A ILE 94 n 94 ILE 94 A GLU 95 n 95 GLU 95 A TYR 96 n 96 TYR 96 A GLY 97 n 97 GLY 97 A LEU 98 n 98 LEU 98 A GLY 99 n 99 GLY 99 A TYR 100 n 100 TYR 100 A ASP 101 n 101 ASP 101 A CYS 102 n 102 CYS 102 A PRO 103 n 103 PRO 103 A ALA 104 n 104 ALA 104 A THR 105 n 105 THR 105 A GLU 106 n 106 GLU 106 A GLY 107 n 107 GLY 107 A ILE 108 n 108 ILE 108 A PHE 109 n 109 PHE 109 A ASP 110 n 110 ASP 110 A TYR 111 n 111 TYR 111 A ALA 112 n 112 ALA 112 A ALA 113 n 113 ALA 113 A ALA 114 n 114 ALA 114 A ILE 115 n 115 ILE 115 A GLY 116 n 116 GLY 116 A GLY 117 n 117 GLY 117 A ALA 118 n 118 ALA 118 A THR 119 n 119 THR 119 A ILE 120 n 120 ILE 120 A THR 121 n 121 THR 121 A ALA 122 n 122 ALA 122 A ALA 123 n 123 ALA 123 A GLN 124 n 124 GLN 124 A CYS 125 n 125 CYS 125 A LEU 126 n 126 LEU 126 A ILE 127 n 127 ILE 127 A ASP 128 n 128 ASP 128 A GLY 129 n 129 GLY 129 A MET 130 n 130 MET 130 A CYS 131 n 131 CYS 131 A LYS 132 n 132 LYS 132 A VAL 133 n 133 VAL 133 A ALA 134 n 134 ALA 134 A ILE 135 n 135 ILE 135 A ASN 136 n 136 ASN 136 A TRP 137 n 137 TRP 137 A SER 138 n 138 SER 138 A GLY 139 n 139 GLY 139 A GLY 140 n 140 GLY 140 A TRP 141 n 141 TRP 141 A HIS 142 n 142 HIS 142 A HIS 143 n 143 HIS 143 A ALA 144 n 144 ALA 144 A LYS 145 n 145 LYS 145 A LYS 146 n 146 LYS 146 A ASP 147 n 147 ASP 147 A GLU 148 n 148 GLU 148 A ALA 149 n 149 ALA 149 A SER 150 n 150 SER 150 A GLY 151 n 151 GLY 151 A PHE 152 n 152 PHE 152 A CYS 153 n 153 CYS 153 A TYR 154 n 154 TYR 154 A LEU 155 n 155 LEU 155 A ASN 156 n 156 ASN 156 A ASP 157 n 157 ASP 157 A ALA 158 n 158 ALA 158 A VAL 159 n 159 VAL 159 A LEU 160 n 160 LEU 160 A GLY 161 n 161 GLY 161 A ILE 162 n 162 ILE 162 A LEU 163 n 163 LEU 163 A ARG 164 n 164 ARG 164 A LEU 165 n 165 LEU 165 A ARG 166 n 166 ARG 166 A ARG 167 n 167 ARG 167 A LYS 168 n 168 LYS 168 A PHE 169 n 169 PHE 169 A GLU 170 n 170 GLU 170 A ARG 171 n 171 ARG 171 A ILE 172 n 172 ILE 172 A LEU 173 n 173 LEU 173 A TYR 174 n 174 TYR 174 A VAL 175 n 175 VAL 175 A ASP 176 n 176 ASP 176 A LEU 177 n 177 LEU 177 A ASP 178 n 178 ASP 178 A LEU 179 n 179 LEU 179 A HIS 180 n 180 HIS 180 A HIS 181 n 181 HIS 181 A GLY 182 n 182 GLY 182 A ASP 183 n 183 ASP 183 A GLY 184 n 184 GLY 184 A VAL 185 n 185 VAL 185 A GLU 186 n 186 GLU 186 A ASP 187 n 187 ASP 187 A ALA 188 n 188 ALA 188 A PHE 189 n 189 PHE 189 A SER 190 n 190 SER 190 A PHE 191 n 191 PHE 191 A THR 192 n 192 THR 192 A SER 193 n 193 SER 193 A LYS 194 n 194 LYS 194 A VAL 195 n 195 VAL 195 A MET 196 n 196 MET 196 A THR 197 n 197 THR 197 A VAL 198 n 198 VAL 198 A SER 199 n 199 SER 199 A LEU 200 n 200 LEU 200 A HIS 201 n 201 HIS 201 A LYS 202 n 202 LYS 202 A PHE 203 n 203 PHE 203 A SER 204 n 204 SER 204 A PRO 205 n 205 PRO 205 A GLY 206 n 206 GLY 206 A PHE 207 n 207 PHE 207 A PHE 208 n 208 PHE 208 A PRO 209 n 209 PRO 209 A GLY 210 n 210 GLY 210 A THR 211 n 211 THR 211 A GLY 212 n 212 GLY 212 A ASP 213 n 213 ASP 213 A VAL 214 n 214 VAL 214 A SER 215 n 215 SER 215 A ASP 216 n 216 ASP 216 A VAL 217 n 217 VAL 217 A GLY 218 n 218 GLY 218 A LEU 219 n 219 LEU 219 A GLY 220 n 220 GLY 220 A LYS 221 n 221 LYS 221 A GLY 222 n 222 GLY 222 A ARG 223 n 223 ARG 223 A TYR 224 n 224 TYR 224 A TYR 225 n 225 TYR 225 A SER 226 n 226 SER 226 A VAL 227 n 227 VAL 227 A ASN 228 n 228 ASN 228 A VAL 229 n 229 VAL 229 A PRO 230 n 230 PRO 230 A ILE 231 n 231 ILE 231 A GLN 232 n 232 GLN 232 A ASP 233 n 233 ASP 233 A GLY 234 n 234 GLY 234 A ILE 235 n 235 ILE 235 A GLN 236 n 236 GLN 236 A ASP 237 n 237 ASP 237 A GLU 238 n 238 GLU 238 A LYS 239 n 239 LYS 239 A TYR 240 n 240 TYR 240 A TYR 241 n 241 TYR 241 A GLN 242 n 242 GLN 242 A ILE 243 n 243 ILE 243 A CYS 244 n 244 CYS 244 A GLU 245 n 245 GLU 245 A SER 246 n 246 SER 246 A VAL 247 n 247 VAL 247 A LEU 248 n 248 LEU 248 A LYS 249 n 249 LYS 249 A GLU 250 n 250 GLU 250 A VAL 251 n 251 VAL 251 A TYR 252 n 252 TYR 252 A GLN 253 n 253 GLN 253 A ALA 254 n 254 ALA 254 A PHE 255 n 255 PHE 255 A ASN 256 n 256 ASN 256 A PRO 257 n 257 PRO 257 A LYS 258 n 258 LYS 258 A ALA 259 n 259 ALA 259 A VAL 260 n 260 VAL 260 A VAL 261 n 261 VAL 261 A LEU 262 n 262 LEU 262 A GLN 263 n 263 GLN 263 A LEU 264 n 264 LEU 264 A GLY 265 n 265 GLY 265 A ALA 266 n 266 ALA 266 A ASP 267 n 267 ASP 267 A THR 268 n 268 THR 268 A ILE 269 n 269 ILE 269 A ALA 270 n 270 ALA 270 A GLY 271 n 271 GLY 271 A ASP 272 n 272 ASP 272 A PRO 273 n 273 PRO 273 A MET 274 n 274 MET 274 A CYS 275 n 275 CYS 275 A SER 276 n 276 SER 276 A PHE 277 n 277 PHE 277 A ASN 278 n 278 ASN 278 A MET 279 n 279 MET 279 A THR 280 n 280 THR 280 A PRO 281 n 281 PRO 281 A VAL 282 n 282 VAL 282 A GLY 283 n 283 GLY 283 A ILE 284 n 284 ILE 284 A GLY 285 n 285 GLY 285 A LYS 286 n 286 LYS 286 A CYS 287 n 287 CYS 287 A LEU 288 n 288 LEU 288 A LYS 289 n 289 LYS 289 A TYR 290 n 290 TYR 290 A ILE 291 n 291 ILE 291 A LEU 292 n 292 LEU 292 A GLN 293 n 293 GLN 293 A TRP 294 n 294 TRP 294 A GLN 295 n 295 GLN 295 A LEU 296 n 296 LEU 296 A ALA 297 n 297 ALA 297 A THR 298 n 298 THR 298 A LEU 299 n 299 LEU 299 A ILE 300 n 300 ILE 300 A LEU 301 n 301 LEU 301 A GLY 302 n 302 GLY 302 A GLY 303 n 303 GLY 303 A GLY 304 n 304 GLY 304 A GLY 305 n 305 GLY 305 A PHE 306 n 306 PHE 306 A ASN 307 n 307 ASN 307 A LEU 308 n 308 LEU 308 A ALA 309 n 309 ALA 309 A ASN 310 n 310 ASN 310 A THR 311 n 311 THR 311 A ALA 312 n 312 ALA 312 A ARG 313 n 313 ARG 313 A CYS 314 n 314 CYS 314 A TRP 315 n 315 TRP 315 A THR 316 n 316 THR 316 A TYR 317 n 317 TYR 317 A LEU 318 n 318 LEU 318 A THR 319 n 319 THR 319 A GLY 320 n 320 GLY 320 A VAL 321 n 321 VAL 321 A ILE 322 n 322 ILE 322 A LEU 323 n 323 LEU 323 A GLY 324 n 324 GLY 324 A LYS 325 n 325 LYS 325 A THR 326 n 326 THR 326 A LEU 327 n 327 LEU 327 A SER 328 n 328 SER 328 A SER 329 n 329 SER 329 A GLU 330 n 330 GLU 330 A ILE 331 n 331 ILE 331 A PRO 332 n 332 PRO 332 A ASP 333 n 333 ASP 333 A ARG 334 n 334 ARG 334 A GLU 335 n 335 GLU 335 A PHE 336 n 336 PHE 336 A PHE 337 n 337 PHE 337 A THR 338 n 338 THR 338 A ALA 339 n 339 ALA 339 A TYR 340 n 340 TYR 340 A GLY 341 n 341 GLY 341 A PRO 342 n 342 PRO 342 A ASP 343 n 343 ASP 343 A TYR 344 n 344 TYR 344 A VAL 345 n 345 VAL 345 A LEU 346 n 346 LEU 346 A GLU 347 n 347 GLU 347 A ILE 348 n 348 ILE 348 A THR 349 n 349 THR 349 A PRO 350 n 350 PRO 350 A SER 351 n 351 SER 351 A CYS 352 n 352 CYS 352 A ARG 353 n 353 ARG 353 A PRO 354 n 354 PRO 354 A ASP 355 n 355 ASP 355 A ARG 356 n 356 ARG 356 A ASN 357 n 357 ASN 357 A GLU 358 n 358 GLU 358 A PRO 359 n 359 PRO 359 A HIS 360 n 360 HIS 360 A ARG 361 n 361 ARG 361 A ILE 362 n 362 ILE 362 A GLN 363 n 363 GLN 363 A GLN 364 n 364 GLN 364 A ILE 365 n 365 ILE 365 A LEU 366 n 366 LEU 366 A ASN 367 n 367 ASN 367 A TYR 368 n 368 TYR 368 A ILE 369 n 369 ILE 369 A LYS 370 n 370 LYS 370 A GLY 371 n 371 GLY 371 A ASN 372 n 372 ASN 372 A LEU 373 n 373 LEU 373 A LYS 374 n 374 LYS 374 A HIS 375 n 375 HIS 375 A VAL 376 n 376 VAL 376 A VAL 377 n 377 VAL 377 A n 378 378 A n 379 379 A n 380 380 A n 381 381 A n 382 382 A n 383 383 A n 384 384 A n 385 385 A n 386 386 A n 387 387 A n 388 388 A n 389 389 A ACE 501 n 1 ACE 501 B ARG 502 n 2 ARG 502 B HIS 503 n 3 HIS 503 B ALY 504 n 4 ALY 504 B ALY 505 n 5 ALY 505 B author_and_software_defined_assembly PISA 2 dimeric 2020 -42 14580 A ASP 176 A OD1 ASP 176 1_555 A K 402 D K K 1_555 A ASP 176 A O ASP 176 1_555 72.7 A ASP 176 A OD1 ASP 176 1_555 A K 402 D K K 1_555 A ASP 178 A O ASP 178 1_555 105.2 A ASP 176 A O ASP 176 1_555 A K 402 D K K 1_555 A ASP 178 A O ASP 178 1_555 105.1 A ASP 176 A OD1 ASP 176 1_555 A K 402 D K K 1_555 A HIS 180 A O HIS 180 1_555 91.8 A ASP 176 A O ASP 176 1_555 A K 402 D K K 1_555 A HIS 180 A O HIS 180 1_555 164.1 A ASP 178 A O ASP 178 1_555 A K 402 D K K 1_555 A HIS 180 A O HIS 180 1_555 81.8 A ASP 176 A OD1 ASP 176 1_555 A K 402 D K K 1_555 A SER 199 A OG SER 199 1_555 104.0 A ASP 176 A O ASP 176 1_555 A K 402 D K K 1_555 A SER 199 A OG SER 199 1_555 85.7 A ASP 178 A O ASP 178 1_555 A K 402 D K K 1_555 A SER 199 A OG SER 199 1_555 150.7 A HIS 180 A O HIS 180 1_555 A K 402 D K K 1_555 A SER 199 A OG SER 199 1_555 95.1 A ASP 176 A OD1 ASP 176 1_555 A K 402 D K K 1_555 A LEU 200 A O LEU 200 1_555 142.3 A ASP 176 A O ASP 176 1_555 A K 402 D K K 1_555 A LEU 200 A O LEU 200 1_555 75.8 A ASP 178 A O ASP 178 1_555 A K 402 D K K 1_555 A LEU 200 A O LEU 200 1_555 63.8 A HIS 180 A O HIS 180 1_555 A K 402 D K K 1_555 A LEU 200 A O LEU 200 1_555 119.9 A SER 199 A OG SER 199 1_555 A K 402 D K K 1_555 A LEU 200 A O LEU 200 1_555 93.7 A ASP 178 A OD1 ASP 178 1_555 A ZN 401 C ZN ZN 1_555 A HIS 180 A ND1 HIS 180 1_555 102.9 A ASP 178 A OD1 ASP 178 1_555 A ZN 401 C ZN ZN 1_555 A ASP 267 A OD2 ASP 267 1_555 95.3 A HIS 180 A ND1 HIS 180 1_555 A ZN 401 C ZN ZN 1_555 A ASP 267 A OD2 ASP 267 1_555 90.3 A ASP 178 A OD1 ASP 178 1_555 A ZN 401 C ZN ZN 1_555 A HOH 522 H O HOH 1_555 84.5 A HIS 180 A ND1 HIS 180 1_555 A ZN 401 C ZN ZN 1_555 A HOH 522 H O HOH 1_555 99.5 A ASP 267 A OD2 ASP 267 1_555 A ZN 401 C ZN ZN 1_555 A HOH 522 H O HOH 1_555 170.0 A ASP 178 A OD1 ASP 178 1_555 A ZN 401 C ZN ZN 1_555 B ALY 505 B OH ALY 5 1_555 147.6 A HIS 180 A ND1 HIS 180 1_555 A ZN 401 C ZN ZN 1_555 B ALY 505 B OH ALY 5 1_555 107.8 A ASP 267 A OD2 ASP 267 1_555 A ZN 401 C ZN ZN 1_555 B ALY 505 B OH ALY 5 1_555 94.5 A HOH 522 H O HOH 1_555 A ZN 401 C ZN ZN 1_555 B ALY 505 B OH ALY 5 1_555 80.7 A PHE 189 A O PHE 189 1_555 A K 403 E K K 1_555 A THR 192 A O THR 192 1_555 74.2 A PHE 189 A O PHE 189 1_555 A K 403 E K K 1_555 A VAL 195 A O VAL 195 1_555 105.1 A THR 192 A O THR 192 1_555 A K 403 E K K 1_555 A VAL 195 A O VAL 195 1_555 84.0 A PHE 189 A O PHE 189 1_555 A K 403 E K K 1_555 A TYR 225 A O TYR 225 1_555 157.8 A THR 192 A O THR 192 1_555 A K 403 E K K 1_555 A TYR 225 A O TYR 225 1_555 125.0 A VAL 195 A O VAL 195 1_555 A K 403 E K K 1_555 A TYR 225 A O TYR 225 1_555 89.3 A PHE 189 A O PHE 189 1_555 A K 403 E K K 1_555 A HOH 523 H O HOH 1_555 84.5 A THR 192 A O THR 192 1_555 A K 403 E K K 1_555 A HOH 523 H O HOH 1_555 94.3 A VAL 195 A O VAL 195 1_555 A K 403 E K K 1_555 A HOH 523 H O HOH 1_555 169.3 A TYR 225 A O TYR 225 1_555 A K 403 E K K 1_555 A HOH 523 H O HOH 1_555 83.1 A PHE 189 A O PHE 189 1_555 A K 403 E K K 1_555 A HOH 536 H O HOH 1_555 71.4 A THR 192 A O THR 192 1_555 A K 403 E K K 1_555 A HOH 536 H O HOH 1_555 145.2 A VAL 195 A O VAL 195 1_555 A K 403 E K K 1_555 A HOH 536 H O HOH 1_555 109.2 A TYR 225 A O TYR 225 1_555 A K 403 E K K 1_555 A HOH 536 H O HOH 1_555 88.0 A HOH 523 H O HOH 1_555 A K 403 E K K 1_555 A HOH 536 H O HOH 1_555 78.1 B ALY 504 N(6)-ACETYLLYSINE B ALY 4 LYS B ALY 505 N(6)-ACETYLLYSINE B ALY 5 LYS 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ARG 55 A O ARG 55 A N TYR 18 A N TYR 18 A N VAL 17 A N VAL 17 A O ILE 135 A O ILE 135 A N ALA 134 A N ALA 134 A O ILE 300 A O ILE 300 A O LEU 301 A O LEU 301 A N LEU 262 A N LEU 262 A O GLN 263 A O GLN 263 A N VAL 175 A N VAL 175 A N ASP 176 A N ASP 176 A O VAL 198 A O VAL 198 A N THR 197 A N THR 197 A O VAL 227 A O VAL 227 1 A CG LYS 60 A CG LYS 60 1 Y 1 A CD LYS 60 A CD LYS 60 1 Y 1 A CE LYS 60 A CE LYS 60 1 Y 1 A NZ LYS 60 A NZ LYS 60 1 Y 1 A CG ASP 89 A CG ASP 89 1 Y 1 A OD1 ASP 89 A OD1 ASP 89 1 Y 1 A OD2 ASP 89 A OD2 ASP 89 1 Y 1 A CG GLU 170 A CG GLU 170 1 Y 1 A CD GLU 170 A CD GLU 170 1 Y 1 A OE1 GLU 170 A OE1 GLU 170 1 Y 1 A OE2 GLU 170 A OE2 GLU 170 1 Y 1 A CG GLN 253 A CG GLN 253 1 Y 1 A CD GLN 253 A CD GLN 253 1 Y 1 A OE1 GLN 253 A OE1 GLN 253 1 Y 1 A NE2 GLN 253 A NE2 GLN 253 1 Y 1 A CG LYS 258 A CG LYS 258 1 Y 1 A CD LYS 258 A CD LYS 258 1 Y 1 A CE LYS 258 A CE LYS 258 1 Y 1 A NZ LYS 258 A NZ LYS 258 1 Y 1 A CG LYS 325 A CG LYS 325 1 Y 1 A CD LYS 325 A CD LYS 325 1 Y 1 A CE LYS 325 A CE LYS 325 1 Y 1 A NZ LYS 325 A NZ LYS 325 1 Y 1 A CG LYS 370 A CG LYS 370 1 Y 1 A CD LYS 370 A CD LYS 370 1 Y 1 A CE LYS 370 A CE LYS 370 1 Y 1 A NZ LYS 370 A NZ LYS 370 1 Y 1 A CG LYS 374 A CG LYS 374 1 Y 1 A CD LYS 374 A CD LYS 374 1 Y 1 A CE LYS 374 A CE LYS 374 1 Y 1 A NZ LYS 374 A NZ LYS 374 1 Y 1 A MET 1 A MET 1 1 Y 1 A GLU 2 A GLU 2 1 Y 1 A GLU 3 A GLU 3 1 Y 1 A PRO 4 A PRO 4 1 Y 1 A GLU 5 A GLU 5 1 Y 1 A GLU 6 A GLU 6 1 Y 1 A PRO 7 A PRO 7 1 Y 1 A ALA 8 A ALA 8 1 Y 1 A ASP 9 A ASP 9 1 Y 1 A SER 10 A SER 10 1 Y 1 A GLY 11 A GLY 11 1 Y 1 A GLN 12 A GLN 12 1 Y 1 A ILE 378 A ILE 378 1 Y 1 A GLU 379 A GLU 379 1 Y 1 A GLY 380 A GLY 380 1 Y 1 A ARG 381 A ARG 381 1 Y 1 A GLY 382 A GLY 382 1 Y 1 A SER 383 A SER 383 1 Y 1 A HIS 384 A HIS 384 1 Y 1 A HIS 385 A HIS 385 1 Y 1 A HIS 386 A HIS 386 1 Y 1 A HIS 387 A HIS 387 1 Y 1 A HIS 388 A HIS 388 1 Y 1 A HIS 389 A HIS 389 1 Y 1 A PHE 70 -135.32 -53.31 1 A GLU 85 -155.57 -36.41 1 A THR 105 -69.47 -177.27 1 A SER 276 -113.62 -71.78 57.99 0.2415 0.2044 0.2083 2.310 42.190 1814 17899 17891 10.14 99.94 0.29 random 1 isotropic THROUGHOUT 1.34 MOLECULAR REPLACEMENT 28.18 0.90 1.11 PDB ENTRY 3EWF ML FLAT BULK SOLVENT MODEL 2.310 42.190 49 2933 22 0 2862 0.002 2964 0.630 4027 11.418 1063 0.042 439 0.003 517 0.3262 0.2860 2.3720 142 1201 100.00 0.3517 0.2788 2.4417 138 1219 100.00 0.2876 0.2596 2.5205 143 1203 100.00 0.3073 0.2575 2.6106 142 1225 100.00 0.3102 0.2366 2.7151 156 1194 100.00 0.3453 0.2550 2.8387 116 1249 100.00 0.3072 0.2366 2.9883 134 1217 100.00 0.2922 0.2359 3.1755 141 1243 100.00 0.2891 0.2213 3.4205 148 1220 100.00 0.2215 0.2032 3.7646 129 1241 100.00 0.1887 0.1851 4.3088 133 1258 100.00 0.2067 0.1800 5.4269 145 1264 100.00 0.2085 0.1750 42.1966 147 1343 100.00 51.85 2.31 50 4QA7 17924 17922 0 -3 0.082 1 26.8 12.0 100 1.597 2.31 2.39 2.0 1740 1 11.5 100 data collection CBASS phasing PHASER refinement PHENIX (phenix.refine: dev_1370) data reduction HKL-2000 data scaling HKL-2000 Crystal structure of H334R/Y306F HDAC8 in complex with a tetrapeptide substrate 1 N N 2 N N 3 N N 4 N N 4 N N 5 N N 6 N N 7 N N 7 N N A SER 21 A SER 21 HELX_P A ASP 29 A ASP 29 1 1 9 A LYS 36 A LYS 36 HELX_P A TYR 48 A TYR 48 1 2 13 A ALA 49 A ALA 49 HELX_P A MET 54 A MET 54 5 3 6 A SER 63 A SER 63 HELX_P A ALA 68 A ALA 68 1 4 6 A THR 72 A THR 72 HELX_P A GLN 84 A GLN 84 1 5 13 A HIS 90 A HIS 90 HELX_P A GLY 97 A GLY 97 5 6 8 A GLY 107 A GLY 107 HELX_P A GLY 129 A GLY 129 1 7 23 A ASN 156 A ASN 156 HELX_P A ARG 166 A ARG 166 1 8 11 A GLY 182 A GLY 182 HELX_P A PHE 189 A PHE 189 1 9 8 A GLN 236 A GLN 236 HELX_P A ASN 256 A ASN 256 1 10 21 A GLY 265 A GLY 265 HELX_P A ILE 269 A ILE 269 5 11 5 A THR 280 A THR 280 HELX_P A GLN 293 A GLN 293 1 12 14 A ASN 307 A ASN 307 HELX_P A GLY 324 A GLY 324 1 13 18 A PHE 336 A PHE 336 HELX_P A GLY 341 A GLY 341 5 14 6 A GLU 358 A GLU 358 HELX_P A LEU 373 A LEU 373 1 15 16 covale 1.330 both B ACE 501 B C ACE 1 1_555 B ARG 502 B N ARG 2 1_555 covale 1.328 both B HIS 503 B C HIS 3 1_555 B ALY 504 B N ALY 4 1_555 covale 1.329 both B ALY 504 B C ALY 4 1_555 B ALY 505 B N ALY 5 1_555 covale 1.333 both B ALY 505 B C ALY 5 1_555 B MCM 601 F N MCM 1_555 metalc 2.804 A ASP 176 A OD1 ASP 176 1_555 A K 402 D K K 1_555 metalc 2.873 A ASP 176 A O ASP 176 1_555 A K 402 D K K 1_555 metalc 2.059 A ASP 178 A OD1 ASP 178 1_555 A ZN 401 C ZN ZN 1_555 metalc 2.749 A ASP 178 A O ASP 178 1_555 A K 402 D K K 1_555 metalc 2.289 A HIS 180 A ND1 HIS 180 1_555 A ZN 401 C ZN ZN 1_555 metalc 2.797 A HIS 180 A O HIS 180 1_555 A K 402 D K K 1_555 metalc 2.677 A PHE 189 A O PHE 189 1_555 A K 403 E K K 1_555 metalc 2.906 A THR 192 A O THR 192 1_555 A K 403 E K K 1_555 metalc 2.679 A VAL 195 A O VAL 195 1_555 A K 403 E K K 1_555 metalc 3.028 A SER 199 A OG SER 199 1_555 A K 402 D K K 1_555 metalc 2.780 A LEU 200 A O LEU 200 1_555 A K 402 D K K 1_555 metalc 2.847 A TYR 225 A O TYR 225 1_555 A K 403 E K K 1_555 metalc 2.090 A ASP 267 A OD2 ASP 267 1_555 A ZN 401 C ZN ZN 1_555 metalc 2.400 A ZN 401 C ZN ZN 1_555 A HOH 522 H O HOH 1_555 metalc 1.968 A ZN 401 C ZN ZN 1_555 B ALY 505 B OH ALY 5 1_555 metalc 2.776 A K 403 E K K 1_555 A HOH 523 H O HOH 1_555 metalc 2.861 A K 403 E K K 1_555 A HOH 536 H O HOH 1_555 HYDROLASE metalloenzyme, hydrolase, histone deacetylase, enzyme substrate complex, Cornelia de Lange Syndrome, arginase/deacetylase fold A PHE 208 A PHE 208 1 A PRO 209 A PRO 209 -2.05 A GLY 341 A GLY 341 1 A PRO 342 A PRO 342 2.94 HDAC8_HUMAN UNP 1 1 Q9BY41 MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQ KVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVL GILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY YQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTG VILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV 4QA7 PDB 2 4QA7 1 377 4QA7 1 377 Q9BY41 A 1 1 377 501 505 4QA7 501 505 4QA7 B 2 1 5 1 TYR engineered mutation PHE 306 4QA7 A Q9BY41 UNP 306 306 1 HIS engineered mutation ARG 334 4QA7 A Q9BY41 UNP 334 334 1 expression tag ILE 378 4QA7 A Q9BY41 UNP 378 1 expression tag GLU 379 4QA7 A Q9BY41 UNP 379 1 expression tag GLY 380 4QA7 A Q9BY41 UNP 380 1 expression tag ARG 381 4QA7 A Q9BY41 UNP 381 1 expression tag GLY 382 4QA7 A Q9BY41 UNP 382 1 expression tag SER 383 4QA7 A Q9BY41 UNP 383 1 expression tag HIS 384 4QA7 A Q9BY41 UNP 384 1 expression tag HIS 385 4QA7 A Q9BY41 UNP 385 1 expression tag HIS 386 4QA7 A Q9BY41 UNP 386 1 expression tag HIS 387 4QA7 A Q9BY41 UNP 387 1 expression tag HIS 388 4QA7 A Q9BY41 UNP 388 1 expression tag HIS 389 4QA7 A Q9BY41 UNP 389 8 parallel parallel parallel parallel parallel parallel parallel A ARG 55 A ARG 55 A VAL 57 A VAL 57 A VAL 17 A VAL 17 A ILE 19 A ILE 19 A VAL 133 A VAL 133 A ASN 136 A ASN 136 A ALA 297 A ALA 297 A LEU 301 A LEU 301 A ALA 259 A ALA 259 A GLN 263 A GLN 263 A ILE 172 A ILE 172 A ASP 176 A ASP 176 A VAL 195 A VAL 195 A LYS 202 A LYS 202 A SER 226 A SER 226 A ILE 231 A ILE 231 BINDING SITE FOR RESIDUE ZN A 401 A ZN 401 Software 5 BINDING SITE FOR RESIDUE K A 402 A K 402 Software 5 BINDING SITE FOR RESIDUE K A 403 A K 403 Software 6 BINDING SITE FOR RESIDUE MCM B 601 B MCM 601 Software 8 BINDING SITE FOR RESIDUE GOL B 602 B GOL 602 Software 6 A ASP 178 A ASP 178 5 1_555 A HIS 180 A HIS 180 5 1_555 A ASP 267 A ASP 267 5 1_555 A HOH 522 H HOH 5 1_555 B ALY 505 B ALY 5 5 1_555 A ASP 176 A ASP 176 5 1_555 A ASP 178 A ASP 178 5 1_555 A HIS 180 A HIS 180 5 1_555 A SER 199 A SER 199 5 1_555 A LEU 200 A LEU 200 5 1_555 A PHE 189 A PHE 189 6 1_555 A THR 192 A THR 192 6 1_555 A VAL 195 A VAL 195 6 1_555 A TYR 225 A TYR 225 6 1_555 A HOH 523 H HOH 6 1_555 A HOH 536 H HOH 6 1_555 A LYS 33 A LYS 33 8 1_555 A LYS 33 A LYS 33 8 6_555 A TYR 100 A TYR 100 8 1_555 A ASP 101 A ASP 101 8 1_555 A PHE 152 A PHE 152 8 6_555 A PHE 152 A PHE 152 8 1_555 A PRO 273 A PRO 273 8 6_555 B ALY 505 B ALY 5 8 1_555 A LYS 145 A LYS 145 6 1_555 A GLU 148 A GLU 148 6 1_555 A PHE 208 A PHE 208 6 1_555 B ARG 502 B ARG 2 6 1_555 B HIS 503 B HIS 3 6 1_555 B HOH 702 I HOH 6 1_555 152 P 31 2 1