0.009432
0.005445
0.000000
0.000000
0.010891
0.000000
0.000000
0.000000
0.004514
0.00000
0.00000
0.00000
Collins, B.C.
Wilson, I.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
106.025
106.025
221.549
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
R
C
N
251
R
C
N
252
R
C
N
253
S
C
N
254
R
C
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
N
N
259
N
O
N
260
N
O
N
261
N
O
N
262
N
O
N
263
N
O
N
264
N
O
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
N
N
304
S
C
N
305
N
C
N
306
N
O
N
307
N
C
N
308
N
C
N
309
N
C
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
N
N
321
S
C
N
322
N
C
N
323
N
O
N
324
N
C
N
325
N
O
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
S
N
335
N
O
N
336
N
O
N
337
N
O
N
338
N
O
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
R
C
N
344
N
O
N
345
N
C
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
N
N
357
S
C
N
358
N
C
N
359
N
O
N
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
N
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
N
N
384
S
C
N
385
N
C
N
386
N
O
N
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
N
394
N
O
N
395
N
O
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
N
N
408
S
C
N
409
N
C
N
410
N
O
N
411
N
C
N
412
N
C
N
413
N
C
N
414
N
O
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
Y
278
N
doub
Y
279
N
sing
Y
280
N
sing
N
281
N
sing
Y
282
N
doub
N
283
N
sing
Y
284
N
doub
N
285
N
sing
Y
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
doub
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
Y
351
N
doub
Y
352
N
sing
Y
353
N
sing
N
354
N
sing
Y
355
N
doub
Y
356
N
sing
Y
357
N
sing
N
358
N
sing
Y
359
N
sing
Y
360
N
doub
N
361
N
sing
Y
362
N
doub
N
363
N
sing
Y
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
Y
379
N
doub
Y
380
N
sing
Y
381
N
sing
N
382
N
sing
Y
383
N
doub
N
384
N
sing
Y
385
N
doub
N
386
N
sing
Y
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
US
Proteins
PSFGEY
0867
0887-3585
82
2874
2878
10.1002/prot.24616
24888966
Crystal structure of the C-terminal domain of mouse TLR9.
2014
10.2210/pdb4qdh/pdb
pdb_00004qdh
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2013-11-20
MARMOSAIC 300 mm CCD
double crystal cryo-cooled Si(111)
SINGLE WAVELENGTH
M
x-ray
1
0.979390
1.0
23-ID-D
APS
0.979390
SYNCHROTRON
APS BEAMLINE 23-ID-D
48774.543
Variable lymphocyte receptor B, Toll-like receptor 9 chimera
SEE REMARK 999
2
man
polymer
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
10
man
non-polymer
96.063
SULFATE ION
8
syn
non-polymer
18.015
water
120
nat
water
Innate Immune Receptor
no
no
ADPGGKACPSRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSRNNLVTIKPEMFV
NLSRLQCLSLSHNSIAQAVNGSQFLPLTNLQVLDLSHNKLDLYHWKSFSELPQLQALDLSYNSQPFSMKGIGHNFSFVTH
LSMLQSLSLAHNDIHTRVSSHLNSNSVRFLDFSGNGMGRMWDEGGLYLHFFQGLSGLLKLDLSQNNLHILRPQNLDNLPK
SLKLLSLRDNYLSFFNWTSLSFLPNLEVLDLAGNQLKALTNGTLPNGTLLQKLDVSSNSIVSVVPAFFALAVELKEVNLS
HNILKTVDRSWFGPIVMNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKC
SGSGKPVRSIICPTASLVPRGSWSHPQFEKGSHHHHHH
ADPGGKACPSRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSRNNLVTIKPEMFV
NLSRLQCLSLSHNSIAQAVNGSQFLPLTNLQVLDLSHNKLDLYHWKSFSELPQLQALDLSYNSQPFSMKGIGHNFSFVTH
LSMLQSLSLAHNDIHTRVSSHLNSNSVRFLDFSGNGMGRMWDEGGLYLHFFQGLSGLLKLDLSQNNLHILRPQNLDNLPK
SLKLLSLRDNYLSFFNWTSLSFLPNLEVLDLAGNQLKALTNGTLPNGTLLQKLDVSSNSIVSVVPAFFALAVELKEVNLS
HNILKTVDRSWFGPIVMNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKC
SGSGKPVRSIICPTASLVPRGSWSHPQFEKGSHHHHHH
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Inshore hagfish, mouse
cabbage looper
sample
5
65
Tlr9, VLRB
7764
Eptatretus burgeri
7111
Trichoplusia ni
Inshore hagfish, mouse
cabbage looper
sample
340
414
Tlr9, VLRB
7764
Eptatretus burgeri
7111
Trichoplusia ni
Inshore hagfish, mouse
cabbage looper
sample
66
339
Tlr9, VLRB
10090
Mus musculus
7111
Trichoplusia ni
1
3.69
66.62
VAPOR DIFFUSION, SITTING DROP
4.77
100 mM sodium citrate, 1.5 M ammonium sulfate, pH 4.77, VAPOR DIFFUSION, SITTING DROP, temperature 295K
295
entity_src_gen
software
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
struct_conn
struct_ref_seq_dif
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Database references
Database references
Refinement description
Source and taxonomy
Data collection
Database references
Derived calculations
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2014-06-11
1
1
2014-07-02
1
2
2014-10-08
1
3
2017-07-26
1
4
2020-07-29
1
5
2023-09-20
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_ref_seq_dif.details
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
RCSB
Y
RCSB
2014-05-13
REL
REL
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
SO4
SULFATE ION
HOH
water
PROTEIN IS A CHIMERA COMPRISING RESIDUES 21-81 FROM UNP Q4G1L2, RESIDUES 480-753 FROM UNP Q9EQU3, AND RESIDUES 126-200 FROM UNP Q4G1L2 FOLLOWED BY A C-TERMINAL EXPRESSION TAG.
3W3G
PDB ENTRY 3W3G
PDB
experimental model
NAG
500
2
NAG
NAG
501
A
NAG
501
2
NAG
NAG
502
A
NAG
502
2
NAG
NAG
503
A
NAG
503
2
NAG
NAG
504
A
NAG
504
2
NAG
NAG
505
A
SO4
600
3
SO4
SO4
506
A
SO4
602
3
SO4
SO4
507
A
SO4
605
3
SO4
SO4
508
A
SO4
606
3
SO4
SO4
509
A
NAG
500
2
NAG
NAG
501
B
NAG
501
2
NAG
NAG
502
B
NAG
502
2
NAG
NAG
503
B
NAG
503
2
NAG
NAG
504
B
NAG
504
2
NAG
NAG
505
B
SO4
601
3
SO4
SO4
506
B
SO4
603
3
SO4
SO4
507
B
SO4
604
3
SO4
SO4
508
B
SO4
607
3
SO4
SO4
509
B
HOH
3
4
HOH
HOH
601
A
HOH
4
4
HOH
HOH
602
A
HOH
5
4
HOH
HOH
603
A
HOH
6
4
HOH
HOH
604
A
HOH
7
4
HOH
HOH
605
A
HOH
8
4
HOH
HOH
606
A
HOH
10
4
HOH
HOH
607
A
HOH
12
4
HOH
HOH
608
A
HOH
14
4
HOH
HOH
609
A
HOH
15
4
HOH
HOH
610
A
HOH
16
4
HOH
HOH
611
A
HOH
19
4
HOH
HOH
612
A
HOH
21
4
HOH
HOH
613
A
HOH
23
4
HOH
HOH
614
A
HOH
24
4
HOH
HOH
615
A
HOH
26
4
HOH
HOH
616
A
HOH
29
4
HOH
HOH
617
A
HOH
30
4
HOH
HOH
618
A
HOH
32
4
HOH
HOH
619
A
HOH
33
4
HOH
HOH
620
A
HOH
34
4
HOH
HOH
621
A
HOH
37
4
HOH
HOH
622
A
HOH
39
4
HOH
HOH
623
A
HOH
41
4
HOH
HOH
624
A
HOH
43
4
HOH
HOH
625
A
HOH
44
4
HOH
HOH
626
A
HOH
46
4
HOH
HOH
627
A
HOH
48
4
HOH
HOH
628
A
HOH
49
4
HOH
HOH
629
A
HOH
50
4
HOH
HOH
630
A
HOH
54
4
HOH
HOH
631
A
HOH
55
4
HOH
HOH
632
A
HOH
65
4
HOH
HOH
633
A
HOH
66
4
HOH
HOH
634
A
HOH
67
4
HOH
HOH
635
A
HOH
68
4
HOH
HOH
636
A
HOH
69
4
HOH
HOH
637
A
HOH
70
4
HOH
HOH
638
A
HOH
71
4
HOH
HOH
639
A
HOH
72
4
HOH
HOH
640
A
HOH
73
4
HOH
HOH
641
A
HOH
74
4
HOH
HOH
642
A
HOH
75
4
HOH
HOH
643
A
HOH
76
4
HOH
HOH
644
A
HOH
77
4
HOH
HOH
645
A
HOH
78
4
HOH
HOH
646
A
HOH
79
4
HOH
HOH
647
A
HOH
80
4
HOH
HOH
648
A
HOH
81
4
HOH
HOH
649
A
HOH
82
4
HOH
HOH
650
A
HOH
83
4
HOH
HOH
651
A
HOH
84
4
HOH
HOH
652
A
HOH
85
4
HOH
HOH
653
A
HOH
86
4
HOH
HOH
654
A
HOH
118
4
HOH
HOH
655
A
HOH
119
4
HOH
HOH
656
A
HOH
120
4
HOH
HOH
657
A
HOH
1
4
HOH
HOH
601
B
HOH
2
4
HOH
HOH
602
B
HOH
9
4
HOH
HOH
603
B
HOH
11
4
HOH
HOH
604
B
HOH
13
4
HOH
HOH
605
B
HOH
17
4
HOH
HOH
606
B
HOH
18
4
HOH
HOH
607
B
HOH
20
4
HOH
HOH
608
B
HOH
22
4
HOH
HOH
609
B
HOH
25
4
HOH
HOH
610
B
HOH
27
4
HOH
HOH
611
B
HOH
28
4
HOH
HOH
612
B
HOH
31
4
HOH
HOH
613
B
HOH
35
4
HOH
HOH
614
B
HOH
36
4
HOH
HOH
615
B
HOH
38
4
HOH
HOH
616
B
HOH
40
4
HOH
HOH
617
B
HOH
42
4
HOH
HOH
618
B
HOH
45
4
HOH
HOH
619
B
HOH
47
4
HOH
HOH
620
B
HOH
51
4
HOH
HOH
621
B
HOH
52
4
HOH
HOH
622
B
HOH
53
4
HOH
HOH
623
B
HOH
56
4
HOH
HOH
624
B
HOH
57
4
HOH
HOH
625
B
HOH
58
4
HOH
HOH
626
B
HOH
59
4
HOH
HOH
627
B
HOH
60
4
HOH
HOH
628
B
HOH
61
4
HOH
HOH
629
B
HOH
62
4
HOH
HOH
630
B
HOH
63
4
HOH
HOH
631
B
HOH
64
4
HOH
HOH
632
B
HOH
87
4
HOH
HOH
633
B
HOH
88
4
HOH
HOH
634
B
HOH
89
4
HOH
HOH
635
B
HOH
90
4
HOH
HOH
636
B
HOH
91
4
HOH
HOH
637
B
HOH
92
4
HOH
HOH
638
B
HOH
93
4
HOH
HOH
639
B
HOH
94
4
HOH
HOH
640
B
HOH
95
4
HOH
HOH
641
B
HOH
96
4
HOH
HOH
642
B
HOH
97
4
HOH
HOH
643
B
HOH
98
4
HOH
HOH
644
B
HOH
99
4
HOH
HOH
645
B
HOH
100
4
HOH
HOH
646
B
HOH
101
4
HOH
HOH
647
B
HOH
102
4
HOH
HOH
648
B
HOH
103
4
HOH
HOH
649
B
HOH
104
4
HOH
HOH
650
B
HOH
105
4
HOH
HOH
651
B
HOH
106
4
HOH
HOH
652
B
HOH
107
4
HOH
HOH
653
B
HOH
108
4
HOH
HOH
654
B
HOH
109
4
HOH
HOH
655
B
HOH
110
4
HOH
HOH
656
B
HOH
111
4
HOH
HOH
657
B
HOH
112
4
HOH
HOH
658
B
HOH
113
4
HOH
HOH
659
B
HOH
114
4
HOH
HOH
660
B
HOH
115
4
HOH
HOH
661
B
HOH
116
4
HOH
HOH
662
B
HOH
117
4
HOH
HOH
663
B
n
1
-6
A
n
2
-5
A
n
3
-4
A
n
4
-3
A
n
5
-2
A
n
6
-1
A
n
7
0
A
CYS
1
n
8
CYS
1
A
PRO
2
n
9
PRO
2
A
SER
3
n
10
SER
3
A
ARG
4
n
11
ARG
4
A
CYS
5
n
12
CYS
5
A
SER
6
n
13
SER
6
A
CYS
7
n
14
CYS
7
A
SER
8
n
15
SER
8
A
GLY
9
n
16
GLY
9
A
THR
10
n
17
THR
10
A
GLU
11
n
18
GLU
11
A
ILE
12
n
19
ILE
12
A
ARG
13
n
20
ARG
13
A
CYS
14
n
21
CYS
14
A
ASN
15
n
22
ASN
15
A
SER
16
n
23
SER
16
A
LYS
17
n
24
LYS
17
A
GLY
18
n
25
GLY
18
A
LEU
19
n
26
LEU
19
A
THR
20
n
27
THR
20
A
SER
21
n
28
SER
21
A
VAL
22
n
29
VAL
22
A
PRO
23
n
30
PRO
23
A
THR
24
n
31
THR
24
A
GLY
25
n
32
GLY
25
A
ILE
26
n
33
ILE
26
A
PRO
27
n
34
PRO
27
A
SER
28
n
35
SER
28
A
SER
29
n
36
SER
29
A
ALA
30
n
37
ALA
30
A
THR
31
n
38
THR
31
A
ARG
32
n
39
ARG
32
A
LEU
33
n
40
LEU
33
A
GLU
34
n
41
GLU
34
A
LEU
35
n
42
LEU
35
A
GLU
36
n
43
GLU
36
A
SER
37
n
44
SER
37
A
ASN
38
n
45
ASN
38
A
LYS
39
n
46
LYS
39
A
LEU
40
n
47
LEU
40
A
GLN
41
n
48
GLN
41
A
SER
42
n
49
SER
42
A
LEU
43
n
50
LEU
43
A
PRO
44
n
51
PRO
44
A
HIS
45
n
52
HIS
45
A
GLY
46
n
53
GLY
46
A
VAL
47
n
54
VAL
47
A
PHE
48
n
55
PHE
48
A
ASP
49
n
56
ASP
49
A
LYS
50
n
57
LYS
50
A
LEU
51
n
58
LEU
51
A
THR
52
n
59
THR
52
A
GLN
53
n
60
GLN
53
A
LEU
54
n
61
LEU
54
A
THR
55
n
62
THR
55
A
LYS
56
n
63
LYS
56
A
LEU
57
n
64
LEU
57
A
SER
58
n
65
SER
58
A
LEU
59
n
66
LEU
59
A
SER
60
n
67
SER
60
A
ARG
61
n
68
ARG
61
A
ASN
62
n
69
ASN
62
A
ASN
63
n
70
ASN
63
A
LEU
64
n
71
LEU
64
A
VAL
65
n
72
VAL
65
A
THR
66
n
73
THR
66
A
ILE
67
n
74
ILE
67
A
LYS
68
n
75
LYS
68
A
PRO
69
n
76
PRO
69
A
GLU
70
n
77
GLU
70
A
MET
71
n
78
MET
71
A
PHE
72
n
79
PHE
72
A
VAL
73
n
80
VAL
73
A
ASN
74
n
81
ASN
74
A
LEU
75
n
82
LEU
75
A
SER
76
n
83
SER
76
A
ARG
77
n
84
ARG
77
A
LEU
78
n
85
LEU
78
A
GLN
79
n
86
GLN
79
A
CYS
80
n
87
CYS
80
A
LEU
81
n
88
LEU
81
A
SER
82
n
89
SER
82
A
LEU
83
n
90
LEU
83
A
SER
84
n
91
SER
84
A
HIS
85
n
92
HIS
85
A
ASN
86
n
93
ASN
86
A
SER
87
n
94
SER
87
A
ILE
88
n
95
ILE
88
A
ALA
89
n
96
ALA
89
A
GLN
90
n
97
GLN
90
A
ALA
91
n
98
ALA
91
A
VAL
92
n
99
VAL
92
A
ASN
93
n
100
ASN
93
A
GLY
94
n
101
GLY
94
A
SER
95
n
102
SER
95
A
GLN
96
n
103
GLN
96
A
PHE
97
n
104
PHE
97
A
LEU
98
n
105
LEU
98
A
PRO
99
n
106
PRO
99
A
LEU
100
n
107
LEU
100
A
THR
101
n
108
THR
101
A
ASN
102
n
109
ASN
102
A
LEU
103
n
110
LEU
103
A
GLN
104
n
111
GLN
104
A
VAL
105
n
112
VAL
105
A
LEU
106
n
113
LEU
106
A
ASP
107
n
114
ASP
107
A
LEU
108
n
115
LEU
108
A
SER
109
n
116
SER
109
A
HIS
110
n
117
HIS
110
A
ASN
111
n
118
ASN
111
A
LYS
112
n
119
LYS
112
A
LEU
113
n
120
LEU
113
A
ASP
114
n
121
ASP
114
A
LEU
115
n
122
LEU
115
A
TYR
116
n
123
TYR
116
A
HIS
117
n
124
HIS
117
A
TRP
118
n
125
TRP
118
A
LYS
119
n
126
LYS
119
A
SER
120
n
127
SER
120
A
PHE
121
n
128
PHE
121
A
SER
122
n
129
SER
122
A
GLU
123
n
130
GLU
123
A
LEU
124
n
131
LEU
124
A
PRO
125
n
132
PRO
125
A
GLN
126
n
133
GLN
126
A
LEU
127
n
134
LEU
127
A
GLN
128
n
135
GLN
128
A
ALA
129
n
136
ALA
129
A
LEU
130
n
137
LEU
130
A
ASP
131
n
138
ASP
131
A
LEU
132
n
139
LEU
132
A
SER
133
n
140
SER
133
A
TYR
134
n
141
TYR
134
A
ASN
135
n
142
ASN
135
A
SER
136
n
143
SER
136
A
GLN
137
n
144
GLN
137
A
PRO
138
n
145
PRO
138
A
PHE
139
n
146
PHE
139
A
n
147
140
A
n
148
141
A
n
149
142
A
n
150
143
A
ILE
144
n
151
ILE
144
A
GLY
145
n
152
GLY
145
A
HIS
146
n
153
HIS
146
A
ASN
147
n
154
ASN
147
A
PHE
148
n
155
PHE
148
A
SER
149
n
156
SER
149
A
PHE
150
n
157
PHE
150
A
VAL
151
n
158
VAL
151
A
THR
152
n
159
THR
152
A
HIS
153
n
160
HIS
153
A
LEU
154
n
161
LEU
154
A
SER
155
n
162
SER
155
A
MET
156
n
163
MET
156
A
LEU
157
n
164
LEU
157
A
GLN
158
n
165
GLN
158
A
SER
159
n
166
SER
159
A
LEU
160
n
167
LEU
160
A
SER
161
n
168
SER
161
A
LEU
162
n
169
LEU
162
A
ALA
163
n
170
ALA
163
A
HIS
164
n
171
HIS
164
A
ASN
165
n
172
ASN
165
A
ASP
166
n
173
ASP
166
A
ILE
167
n
174
ILE
167
A
HIS
168
n
175
HIS
168
A
THR
169
n
176
THR
169
A
ARG
170
n
177
ARG
170
A
VAL
171
n
178
VAL
171
A
SER
172
n
179
SER
172
A
SER
173
n
180
SER
173
A
HIS
174
n
181
HIS
174
A
LEU
175
n
182
LEU
175
A
ASN
176
n
183
ASN
176
A
SER
177
n
184
SER
177
A
ASN
178
n
185
ASN
178
A
SER
179
n
186
SER
179
A
VAL
180
n
187
VAL
180
A
ARG
181
n
188
ARG
181
A
PHE
182
n
189
PHE
182
A
LEU
183
n
190
LEU
183
A
ASP
184
n
191
ASP
184
A
PHE
185
n
192
PHE
185
A
SER
186
n
193
SER
186
A
GLY
187
n
194
GLY
187
A
ASN
188
n
195
ASN
188
A
GLY
189
n
196
GLY
189
A
MET
190
n
197
MET
190
A
GLY
191
n
198
GLY
191
A
ARG
192
n
199
ARG
192
A
MET
193
n
200
MET
193
A
TRP
194
n
201
TRP
194
A
ASP
195
n
202
ASP
195
A
GLU
196
n
203
GLU
196
A
GLY
197
n
204
GLY
197
A
GLY
198
n
205
GLY
198
A
LEU
199
n
206
LEU
199
A
TYR
200
n
207
TYR
200
A
LEU
201
n
208
LEU
201
A
HIS
202
n
209
HIS
202
A
PHE
203
n
210
PHE
203
A
PHE
204
n
211
PHE
204
A
GLN
205
n
212
GLN
205
A
GLY
206
n
213
GLY
206
A
LEU
207
n
214
LEU
207
A
SER
208
n
215
SER
208
A
GLY
209
n
216
GLY
209
A
LEU
210
n
217
LEU
210
A
LEU
211
n
218
LEU
211
A
LYS
212
n
219
LYS
212
A
LEU
213
n
220
LEU
213
A
ASP
214
n
221
ASP
214
A
LEU
215
n
222
LEU
215
A
SER
216
n
223
SER
216
A
GLN
217
n
224
GLN
217
A
ASN
218
n
225
ASN
218
A
ASN
219
n
226
ASN
219
A
LEU
220
n
227
LEU
220
A
HIS
221
n
228
HIS
221
A
ILE
222
n
229
ILE
222
A
LEU
223
n
230
LEU
223
A
ARG
224
n
231
ARG
224
A
PRO
225
n
232
PRO
225
A
GLN
226
n
233
GLN
226
A
ASN
227
n
234
ASN
227
A
LEU
228
n
235
LEU
228
A
ASP
229
n
236
ASP
229
A
ASN
230
n
237
ASN
230
A
LEU
231
n
238
LEU
231
A
PRO
232
n
239
PRO
232
A
LYS
233
n
240
LYS
233
A
SER
234
n
241
SER
234
A
LEU
235
n
242
LEU
235
A
LYS
236
n
243
LYS
236
A
LEU
237
n
244
LEU
237
A
LEU
238
n
245
LEU
238
A
SER
239
n
246
SER
239
A
LEU
240
n
247
LEU
240
A
ARG
241
n
248
ARG
241
A
ASP
242
n
249
ASP
242
A
ASN
243
n
250
ASN
243
A
TYR
244
n
251
TYR
244
A
LEU
245
n
252
LEU
245
A
SER
246
n
253
SER
246
A
PHE
247
n
254
PHE
247
A
PHE
248
n
255
PHE
248
A
ASN
249
n
256
ASN
249
A
TRP
250
n
257
TRP
250
A
THR
251
n
258
THR
251
A
SER
252
n
259
SER
252
A
LEU
253
n
260
LEU
253
A
SER
254
n
261
SER
254
A
PHE
255
n
262
PHE
255
A
LEU
256
n
263
LEU
256
A
PRO
257
n
264
PRO
257
A
ASN
258
n
265
ASN
258
A
LEU
259
n
266
LEU
259
A
GLU
260
n
267
GLU
260
A
VAL
261
n
268
VAL
261
A
LEU
262
n
269
LEU
262
A
ASP
263
n
270
ASP
263
A
LEU
264
n
271
LEU
264
A
ALA
265
n
272
ALA
265
A
GLY
266
n
273
GLY
266
A
ASN
267
n
274
ASN
267
A
GLN
268
n
275
GLN
268
A
LEU
269
n
276
LEU
269
A
LYS
270
n
277
LYS
270
A
ALA
271
n
278
ALA
271
A
LEU
272
n
279
LEU
272
A
THR
273
n
280
THR
273
A
ASN
274
n
281
ASN
274
A
GLY
275
n
282
GLY
275
A
THR
276
n
283
THR
276
A
LEU
277
n
284
LEU
277
A
PRO
278
n
285
PRO
278
A
ASN
279
n
286
ASN
279
A
GLY
280
n
287
GLY
280
A
THR
281
n
288
THR
281
A
LEU
282
n
289
LEU
282
A
LEU
283
n
290
LEU
283
A
GLN
284
n
291
GLN
284
A
LYS
285
n
292
LYS
285
A
LEU
286
n
293
LEU
286
A
ASP
287
n
294
ASP
287
A
VAL
288
n
295
VAL
288
A
SER
289
n
296
SER
289
A
SER
290
n
297
SER
290
A
ASN
291
n
298
ASN
291
A
SER
292
n
299
SER
292
A
ILE
293
n
300
ILE
293
A
VAL
294
n
301
VAL
294
A
SER
295
n
302
SER
295
A
VAL
296
n
303
VAL
296
A
VAL
297
n
304
VAL
297
A
PRO
298
n
305
PRO
298
A
ALA
299
n
306
ALA
299
A
PHE
300
n
307
PHE
300
A
PHE
301
n
308
PHE
301
A
ALA
302
n
309
ALA
302
A
LEU
303
n
310
LEU
303
A
ALA
304
n
311
ALA
304
A
VAL
305
n
312
VAL
305
A
GLU
306
n
313
GLU
306
A
LEU
307
n
314
LEU
307
A
LYS
308
n
315
LYS
308
A
GLU
309
n
316
GLU
309
A
VAL
310
n
317
VAL
310
A
ASN
311
n
318
ASN
311
A
LEU
312
n
319
LEU
312
A
SER
313
n
320
SER
313
A
HIS
314
n
321
HIS
314
A
ASN
315
n
322
ASN
315
A
ILE
316
n
323
ILE
316
A
LEU
317
n
324
LEU
317
A
LYS
318
n
325
LYS
318
A
THR
319
n
326
THR
319
A
VAL
320
n
327
VAL
320
A
ASP
321
n
328
ASP
321
A
ARG
322
n
329
ARG
322
A
SER
323
n
330
SER
323
A
TRP
324
n
331
TRP
324
A
PHE
325
n
332
PHE
325
A
GLY
326
n
333
GLY
326
A
PRO
327
n
334
PRO
327
A
ILE
328
n
335
ILE
328
A
VAL
329
n
336
VAL
329
A
MET
330
n
337
MET
330
A
ASN
331
n
338
ASN
331
A
LEU
332
n
339
LEU
332
A
LYS
333
n
340
LYS
333
A
GLU
334
n
341
GLU
334
A
LEU
335
n
342
LEU
335
A
ALA
336
n
343
ALA
336
A
LEU
337
n
344
LEU
337
A
ASP
338
n
345
ASP
338
A
THR
339
n
346
THR
339
A
ASN
340
n
347
ASN
340
A
GLN
341
n
348
GLN
341
A
LEU
342
n
349
LEU
342
A
LYS
343
n
350
LYS
343
A
SER
344
n
351
SER
344
A
VAL
345
n
352
VAL
345
A
PRO
346
n
353
PRO
346
A
ASP
347
n
354
ASP
347
A
GLY
348
n
355
GLY
348
A
ILE
349
n
356
ILE
349
A
PHE
350
n
357
PHE
350
A
ASP
351
n
358
ASP
351
A
ARG
352
n
359
ARG
352
A
LEU
353
n
360
LEU
353
A
THR
354
n
361
THR
354
A
SER
355
n
362
SER
355
A
LEU
356
n
363
LEU
356
A
GLN
357
n
364
GLN
357
A
LYS
358
n
365
LYS
358
A
ILE
359
n
366
ILE
359
A
TRP
360
n
367
TRP
360
A
LEU
361
n
368
LEU
361
A
HIS
362
n
369
HIS
362
A
THR
363
n
370
THR
363
A
ASN
364
n
371
ASN
364
A
PRO
365
n
372
PRO
365
A
TRP
366
n
373
TRP
366
A
ASP
367
n
374
ASP
367
A
CYS
368
n
375
CYS
368
A
SER
369
n
376
SER
369
A
CYS
370
n
377
CYS
370
A
PRO
371
n
378
PRO
371
A
ARG
372
n
379
ARG
372
A
ILE
373
n
380
ILE
373
A
ASP
374
n
381
ASP
374
A
TYR
375
n
382
TYR
375
A
LEU
376
n
383
LEU
376
A
SER
377
n
384
SER
377
A
ARG
378
n
385
ARG
378
A
TRP
379
n
386
TRP
379
A
LEU
380
n
387
LEU
380
A
ASN
381
n
388
ASN
381
A
LYS
382
n
389
LYS
382
A
ASN
383
n
390
ASN
383
A
SER
384
n
391
SER
384
A
GLN
385
n
392
GLN
385
A
LYS
386
n
393
LYS
386
A
GLU
387
n
394
GLU
387
A
GLN
388
n
395
GLN
388
A
GLY
389
n
396
GLY
389
A
SER
390
n
397
SER
390
A
ALA
391
n
398
ALA
391
A
LYS
392
n
399
LYS
392
A
CYS
393
n
400
CYS
393
A
SER
394
n
401
SER
394
A
GLY
395
n
402
GLY
395
A
SER
396
n
403
SER
396
A
GLY
397
n
404
GLY
397
A
LYS
398
n
405
LYS
398
A
PRO
399
n
406
PRO
399
A
VAL
400
n
407
VAL
400
A
ARG
401
n
408
ARG
401
A
SER
402
n
409
SER
402
A
ILE
403
n
410
ILE
403
A
ILE
404
n
411
ILE
404
A
CYS
405
n
412
CYS
405
A
PRO
406
n
413
PRO
406
A
n
414
407
A
n
415
408
A
n
416
409
A
n
417
410
A
n
418
411
A
n
419
412
A
n
420
413
A
n
421
414
A
n
422
415
A
n
423
416
A
n
424
417
A
n
425
418
A
n
426
419
A
n
427
420
A
n
428
421
A
n
429
422
A
n
430
423
A
n
431
424
A
n
432
425
A
n
433
426
A
n
434
427
A
n
435
428
A
n
436
429
A
n
437
430
A
n
438
431
A
n
1
-6
B
n
2
-5
B
n
3
-4
B
n
4
-3
B
n
5
-2
B
n
6
-1
B
n
7
0
B
CYS
1
n
8
CYS
1
B
PRO
2
n
9
PRO
2
B
SER
3
n
10
SER
3
B
ARG
4
n
11
ARG
4
B
CYS
5
n
12
CYS
5
B
SER
6
n
13
SER
6
B
CYS
7
n
14
CYS
7
B
SER
8
n
15
SER
8
B
GLY
9
n
16
GLY
9
B
THR
10
n
17
THR
10
B
GLU
11
n
18
GLU
11
B
ILE
12
n
19
ILE
12
B
ARG
13
n
20
ARG
13
B
CYS
14
n
21
CYS
14
B
ASN
15
n
22
ASN
15
B
SER
16
n
23
SER
16
B
LYS
17
n
24
LYS
17
B
GLY
18
n
25
GLY
18
B
LEU
19
n
26
LEU
19
B
THR
20
n
27
THR
20
B
SER
21
n
28
SER
21
B
VAL
22
n
29
VAL
22
B
PRO
23
n
30
PRO
23
B
THR
24
n
31
THR
24
B
GLY
25
n
32
GLY
25
B
ILE
26
n
33
ILE
26
B
PRO
27
n
34
PRO
27
B
SER
28
n
35
SER
28
B
SER
29
n
36
SER
29
B
ALA
30
n
37
ALA
30
B
THR
31
n
38
THR
31
B
ARG
32
n
39
ARG
32
B
LEU
33
n
40
LEU
33
B
GLU
34
n
41
GLU
34
B
LEU
35
n
42
LEU
35
B
GLU
36
n
43
GLU
36
B
SER
37
n
44
SER
37
B
ASN
38
n
45
ASN
38
B
LYS
39
n
46
LYS
39
B
LEU
40
n
47
LEU
40
B
GLN
41
n
48
GLN
41
B
SER
42
n
49
SER
42
B
LEU
43
n
50
LEU
43
B
PRO
44
n
51
PRO
44
B
HIS
45
n
52
HIS
45
B
GLY
46
n
53
GLY
46
B
VAL
47
n
54
VAL
47
B
PHE
48
n
55
PHE
48
B
ASP
49
n
56
ASP
49
B
LYS
50
n
57
LYS
50
B
LEU
51
n
58
LEU
51
B
THR
52
n
59
THR
52
B
GLN
53
n
60
GLN
53
B
LEU
54
n
61
LEU
54
B
THR
55
n
62
THR
55
B
LYS
56
n
63
LYS
56
B
LEU
57
n
64
LEU
57
B
SER
58
n
65
SER
58
B
LEU
59
n
66
LEU
59
B
SER
60
n
67
SER
60
B
ARG
61
n
68
ARG
61
B
ASN
62
n
69
ASN
62
B
ASN
63
n
70
ASN
63
B
LEU
64
n
71
LEU
64
B
VAL
65
n
72
VAL
65
B
THR
66
n
73
THR
66
B
ILE
67
n
74
ILE
67
B
LYS
68
n
75
LYS
68
B
PRO
69
n
76
PRO
69
B
GLU
70
n
77
GLU
70
B
MET
71
n
78
MET
71
B
PHE
72
n
79
PHE
72
B
VAL
73
n
80
VAL
73
B
ASN
74
n
81
ASN
74
B
LEU
75
n
82
LEU
75
B
SER
76
n
83
SER
76
B
ARG
77
n
84
ARG
77
B
LEU
78
n
85
LEU
78
B
GLN
79
n
86
GLN
79
B
CYS
80
n
87
CYS
80
B
LEU
81
n
88
LEU
81
B
SER
82
n
89
SER
82
B
LEU
83
n
90
LEU
83
B
SER
84
n
91
SER
84
B
HIS
85
n
92
HIS
85
B
ASN
86
n
93
ASN
86
B
SER
87
n
94
SER
87
B
ILE
88
n
95
ILE
88
B
ALA
89
n
96
ALA
89
B
GLN
90
n
97
GLN
90
B
ALA
91
n
98
ALA
91
B
VAL
92
n
99
VAL
92
B
ASN
93
n
100
ASN
93
B
GLY
94
n
101
GLY
94
B
SER
95
n
102
SER
95
B
GLN
96
n
103
GLN
96
B
PHE
97
n
104
PHE
97
B
LEU
98
n
105
LEU
98
B
PRO
99
n
106
PRO
99
B
LEU
100
n
107
LEU
100
B
THR
101
n
108
THR
101
B
ASN
102
n
109
ASN
102
B
LEU
103
n
110
LEU
103
B
GLN
104
n
111
GLN
104
B
VAL
105
n
112
VAL
105
B
LEU
106
n
113
LEU
106
B
ASP
107
n
114
ASP
107
B
LEU
108
n
115
LEU
108
B
SER
109
n
116
SER
109
B
HIS
110
n
117
HIS
110
B
ASN
111
n
118
ASN
111
B
LYS
112
n
119
LYS
112
B
LEU
113
n
120
LEU
113
B
ASP
114
n
121
ASP
114
B
LEU
115
n
122
LEU
115
B
TYR
116
n
123
TYR
116
B
HIS
117
n
124
HIS
117
B
TRP
118
n
125
TRP
118
B
LYS
119
n
126
LYS
119
B
SER
120
n
127
SER
120
B
PHE
121
n
128
PHE
121
B
SER
122
n
129
SER
122
B
GLU
123
n
130
GLU
123
B
LEU
124
n
131
LEU
124
B
PRO
125
n
132
PRO
125
B
GLN
126
n
133
GLN
126
B
LEU
127
n
134
LEU
127
B
GLN
128
n
135
GLN
128
B
ALA
129
n
136
ALA
129
B
LEU
130
n
137
LEU
130
B
ASP
131
n
138
ASP
131
B
LEU
132
n
139
LEU
132
B
SER
133
n
140
SER
133
B
TYR
134
n
141
TYR
134
B
ASN
135
n
142
ASN
135
B
SER
136
n
143
SER
136
B
GLN
137
n
144
GLN
137
B
PRO
138
n
145
PRO
138
B
PHE
139
n
146
PHE
139
B
n
147
140
B
n
148
141
B
n
149
142
B
n
150
143
B
ILE
144
n
151
ILE
144
B
GLY
145
n
152
GLY
145
B
HIS
146
n
153
HIS
146
B
ASN
147
n
154
ASN
147
B
PHE
148
n
155
PHE
148
B
SER
149
n
156
SER
149
B
PHE
150
n
157
PHE
150
B
VAL
151
n
158
VAL
151
B
THR
152
n
159
THR
152
B
HIS
153
n
160
HIS
153
B
LEU
154
n
161
LEU
154
B
SER
155
n
162
SER
155
B
MET
156
n
163
MET
156
B
LEU
157
n
164
LEU
157
B
GLN
158
n
165
GLN
158
B
SER
159
n
166
SER
159
B
LEU
160
n
167
LEU
160
B
SER
161
n
168
SER
161
B
LEU
162
n
169
LEU
162
B
ALA
163
n
170
ALA
163
B
HIS
164
n
171
HIS
164
B
ASN
165
n
172
ASN
165
B
ASP
166
n
173
ASP
166
B
ILE
167
n
174
ILE
167
B
HIS
168
n
175
HIS
168
B
THR
169
n
176
THR
169
B
ARG
170
n
177
ARG
170
B
VAL
171
n
178
VAL
171
B
SER
172
n
179
SER
172
B
SER
173
n
180
SER
173
B
HIS
174
n
181
HIS
174
B
LEU
175
n
182
LEU
175
B
ASN
176
n
183
ASN
176
B
SER
177
n
184
SER
177
B
ASN
178
n
185
ASN
178
B
SER
179
n
186
SER
179
B
VAL
180
n
187
VAL
180
B
ARG
181
n
188
ARG
181
B
PHE
182
n
189
PHE
182
B
LEU
183
n
190
LEU
183
B
ASP
184
n
191
ASP
184
B
PHE
185
n
192
PHE
185
B
SER
186
n
193
SER
186
B
GLY
187
n
194
GLY
187
B
ASN
188
n
195
ASN
188
B
GLY
189
n
196
GLY
189
B
MET
190
n
197
MET
190
B
GLY
191
n
198
GLY
191
B
ARG
192
n
199
ARG
192
B
MET
193
n
200
MET
193
B
TRP
194
n
201
TRP
194
B
ASP
195
n
202
ASP
195
B
GLU
196
n
203
GLU
196
B
GLY
197
n
204
GLY
197
B
GLY
198
n
205
GLY
198
B
LEU
199
n
206
LEU
199
B
TYR
200
n
207
TYR
200
B
LEU
201
n
208
LEU
201
B
HIS
202
n
209
HIS
202
B
PHE
203
n
210
PHE
203
B
PHE
204
n
211
PHE
204
B
GLN
205
n
212
GLN
205
B
GLY
206
n
213
GLY
206
B
LEU
207
n
214
LEU
207
B
SER
208
n
215
SER
208
B
GLY
209
n
216
GLY
209
B
LEU
210
n
217
LEU
210
B
LEU
211
n
218
LEU
211
B
LYS
212
n
219
LYS
212
B
LEU
213
n
220
LEU
213
B
ASP
214
n
221
ASP
214
B
LEU
215
n
222
LEU
215
B
SER
216
n
223
SER
216
B
GLN
217
n
224
GLN
217
B
ASN
218
n
225
ASN
218
B
ASN
219
n
226
ASN
219
B
LEU
220
n
227
LEU
220
B
HIS
221
n
228
HIS
221
B
ILE
222
n
229
ILE
222
B
LEU
223
n
230
LEU
223
B
ARG
224
n
231
ARG
224
B
PRO
225
n
232
PRO
225
B
GLN
226
n
233
GLN
226
B
ASN
227
n
234
ASN
227
B
LEU
228
n
235
LEU
228
B
ASP
229
n
236
ASP
229
B
ASN
230
n
237
ASN
230
B
LEU
231
n
238
LEU
231
B
PRO
232
n
239
PRO
232
B
LYS
233
n
240
LYS
233
B
SER
234
n
241
SER
234
B
LEU
235
n
242
LEU
235
B
LYS
236
n
243
LYS
236
B
LEU
237
n
244
LEU
237
B
LEU
238
n
245
LEU
238
B
SER
239
n
246
SER
239
B
LEU
240
n
247
LEU
240
B
ARG
241
n
248
ARG
241
B
ASP
242
n
249
ASP
242
B
ASN
243
n
250
ASN
243
B
TYR
244
n
251
TYR
244
B
LEU
245
n
252
LEU
245
B
SER
246
n
253
SER
246
B
PHE
247
n
254
PHE
247
B
PHE
248
n
255
PHE
248
B
ASN
249
n
256
ASN
249
B
TRP
250
n
257
TRP
250
B
THR
251
n
258
THR
251
B
SER
252
n
259
SER
252
B
LEU
253
n
260
LEU
253
B
SER
254
n
261
SER
254
B
PHE
255
n
262
PHE
255
B
LEU
256
n
263
LEU
256
B
PRO
257
n
264
PRO
257
B
ASN
258
n
265
ASN
258
B
LEU
259
n
266
LEU
259
B
GLU
260
n
267
GLU
260
B
VAL
261
n
268
VAL
261
B
LEU
262
n
269
LEU
262
B
ASP
263
n
270
ASP
263
B
LEU
264
n
271
LEU
264
B
ALA
265
n
272
ALA
265
B
GLY
266
n
273
GLY
266
B
ASN
267
n
274
ASN
267
B
GLN
268
n
275
GLN
268
B
LEU
269
n
276
LEU
269
B
LYS
270
n
277
LYS
270
B
ALA
271
n
278
ALA
271
B
LEU
272
n
279
LEU
272
B
THR
273
n
280
THR
273
B
ASN
274
n
281
ASN
274
B
GLY
275
n
282
GLY
275
B
THR
276
n
283
THR
276
B
LEU
277
n
284
LEU
277
B
PRO
278
n
285
PRO
278
B
ASN
279
n
286
ASN
279
B
GLY
280
n
287
GLY
280
B
THR
281
n
288
THR
281
B
LEU
282
n
289
LEU
282
B
LEU
283
n
290
LEU
283
B
GLN
284
n
291
GLN
284
B
LYS
285
n
292
LYS
285
B
LEU
286
n
293
LEU
286
B
ASP
287
n
294
ASP
287
B
VAL
288
n
295
VAL
288
B
SER
289
n
296
SER
289
B
SER
290
n
297
SER
290
B
ASN
291
n
298
ASN
291
B
SER
292
n
299
SER
292
B
ILE
293
n
300
ILE
293
B
VAL
294
n
301
VAL
294
B
SER
295
n
302
SER
295
B
VAL
296
n
303
VAL
296
B
VAL
297
n
304
VAL
297
B
PRO
298
n
305
PRO
298
B
ALA
299
n
306
ALA
299
B
PHE
300
n
307
PHE
300
B
PHE
301
n
308
PHE
301
B
ALA
302
n
309
ALA
302
B
LEU
303
n
310
LEU
303
B
ALA
304
n
311
ALA
304
B
VAL
305
n
312
VAL
305
B
GLU
306
n
313
GLU
306
B
LEU
307
n
314
LEU
307
B
LYS
308
n
315
LYS
308
B
GLU
309
n
316
GLU
309
B
VAL
310
n
317
VAL
310
B
ASN
311
n
318
ASN
311
B
LEU
312
n
319
LEU
312
B
SER
313
n
320
SER
313
B
HIS
314
n
321
HIS
314
B
ASN
315
n
322
ASN
315
B
ILE
316
n
323
ILE
316
B
LEU
317
n
324
LEU
317
B
LYS
318
n
325
LYS
318
B
THR
319
n
326
THR
319
B
VAL
320
n
327
VAL
320
B
ASP
321
n
328
ASP
321
B
ALA
322
n
329
ARG
322
B
SER
323
n
330
SER
323
B
TRP
324
n
331
TRP
324
B
n
332
325
B
n
333
326
B
n
334
327
B
n
335
328
B
n
336
329
B
n
337
330
B
n
338
331
B
LEU
332
n
339
LEU
332
B
LYS
333
n
340
LYS
333
B
GLU
334
n
341
GLU
334
B
LEU
335
n
342
LEU
335
B
ALA
336
n
343
ALA
336
B
LEU
337
n
344
LEU
337
B
ASP
338
n
345
ASP
338
B
THR
339
n
346
THR
339
B
ASN
340
n
347
ASN
340
B
GLN
341
n
348
GLN
341
B
LEU
342
n
349
LEU
342
B
LYS
343
n
350
LYS
343
B
SER
344
n
351
SER
344
B
VAL
345
n
352
VAL
345
B
PRO
346
n
353
PRO
346
B
ASP
347
n
354
ASP
347
B
GLY
348
n
355
GLY
348
B
ILE
349
n
356
ILE
349
B
PHE
350
n
357
PHE
350
B
ASP
351
n
358
ASP
351
B
n
359
352
B
n
360
353
B
THR
354
n
361
THR
354
B
SER
355
n
362
SER
355
B
LEU
356
n
363
LEU
356
B
GLN
357
n
364
GLN
357
B
LYS
358
n
365
LYS
358
B
ILE
359
n
366
ILE
359
B
TRP
360
n
367
TRP
360
B
LEU
361
n
368
LEU
361
B
HIS
362
n
369
HIS
362
B
THR
363
n
370
THR
363
B
ASN
364
n
371
ASN
364
B
PRO
365
n
372
PRO
365
B
TRP
366
n
373
TRP
366
B
ASP
367
n
374
ASP
367
B
CYS
368
n
375
CYS
368
B
SER
369
n
376
SER
369
B
CYS
370
n
377
CYS
370
B
PRO
371
n
378
PRO
371
B
ARG
372
n
379
ARG
372
B
ILE
373
n
380
ILE
373
B
ASP
374
n
381
ASP
374
B
TYR
375
n
382
TYR
375
B
LEU
376
n
383
LEU
376
B
SER
377
n
384
SER
377
B
ARG
378
n
385
ARG
378
B
TRP
379
n
386
TRP
379
B
LEU
380
n
387
LEU
380
B
ASN
381
n
388
ASN
381
B
LYS
382
n
389
LYS
382
B
ASN
383
n
390
ASN
383
B
SER
384
n
391
SER
384
B
GLN
385
n
392
GLN
385
B
LYS
386
n
393
LYS
386
B
GLU
387
n
394
GLU
387
B
GLN
388
n
395
GLN
388
B
GLY
389
n
396
GLY
389
B
SER
390
n
397
SER
390
B
ALA
391
n
398
ALA
391
B
LYS
392
n
399
LYS
392
B
CYS
393
n
400
CYS
393
B
SER
394
n
401
SER
394
B
GLY
395
n
402
GLY
395
B
SER
396
n
403
SER
396
B
GLY
397
n
404
GLY
397
B
LYS
398
n
405
LYS
398
B
PRO
399
n
406
PRO
399
B
VAL
400
n
407
VAL
400
B
ARG
401
n
408
ARG
401
B
SER
402
n
409
SER
402
B
ILE
403
n
410
ILE
403
B
ILE
404
n
411
ILE
404
B
CYS
405
n
412
CYS
405
B
PRO
406
n
413
PRO
406
B
n
414
407
B
n
415
408
B
n
416
409
B
n
417
410
B
n
418
411
B
n
419
412
B
n
420
413
B
n
421
414
B
n
422
415
B
n
423
416
B
n
424
417
B
n
425
418
B
n
426
419
B
n
427
420
B
n
428
421
B
n
429
422
B
n
430
423
B
n
431
424
B
n
432
425
B
n
433
426
B
n
434
427
B
n
435
428
B
n
436
429
B
n
437
430
B
n
438
431
B
0.4232
0.2388
-0.1405
1.1748
-0.8042
2.0621
-0.0262
-0.0466
0.0674
0.0525
-0.0393
0.0402
-0.1773
0.0796
0.0515
0.1804
0.0475
-0.0039
0.1946
-0.0162
0.1799
refined
45.5548
-17.1487
11.0660
X-RAY DIFFRACTION
1.1604
-0.1439
0.4664
1.0557
0.0544
2.2024
-0.1179
-0.0847
-0.0867
-0.0291
0.0148
-0.2302
-0.0116
0.3271
0.0840
0.1783
0.0577
0.0209
0.2721
0.0103
0.2414
refined
63.0701
-39.1614
1.2399
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain A
X-RAY DIFFRACTION
2
chain B
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
A
ASN
249
GLYCOSYLATION SITE
A
ASN
256
ASN
A
ASN
274
GLYCOSYLATION SITE
A
ASN
281
ASN
B
ASN
93
GLYCOSYLATION SITE
B
ASN
100
ASN
B
ASN
249
GLYCOSYLATION SITE
B
ASN
256
ASN
A
ASN
147
GLYCOSYLATION SITE
A
ASN
154
ASN
B
ASN
274
GLYCOSYLATION SITE
B
ASN
281
ASN
B
ASN
147
GLYCOSYLATION SITE
B
ASN
154
ASN
A
ASN
93
GLYCOSYLATION SITE
A
ASN
100
ASN
B
ASN
311
GLYCOSYLATION SITE
B
ASN
318
ASN
A
ASN
311
GLYCOSYLATION SITE
A
ASN
318
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
SER
6
A
N
SER
13
A
O
ARG
13
A
O
ARG
20
A
N
ILE
12
A
N
ILE
19
A
O
ARG
32
A
O
ARG
39
A
N
LEU
33
A
N
LEU
40
A
O
LYS
56
A
O
LYS
63
A
N
LEU
57
A
N
LEU
64
A
O
CYS
80
A
O
CYS
87
A
N
LEU
81
A
N
LEU
88
A
O
ASP
107
A
O
ASP
114
A
N
LEU
106
A
N
LEU
113
A
O
ASP
131
A
O
ASP
138
A
N
LEU
130
A
N
LEU
137
A
O
SER
159
A
O
SER
166
A
N
LEU
160
A
N
LEU
167
A
O
PHE
182
A
O
PHE
189
A
N
LEU
183
A
N
LEU
190
A
O
LYS
212
A
O
LYS
219
A
N
LEU
213
A
N
LEU
220
A
O
LEU
237
A
O
LEU
244
A
N
LEU
238
A
N
LEU
245
A
O
ASP
263
A
O
ASP
270
A
N
LEU
262
A
N
LEU
269
A
O
ASP
287
A
O
ASP
294
A
N
LEU
286
A
N
LEU
293
A
O
GLU
309
A
O
GLU
316
A
N
VAL
310
A
N
VAL
317
A
O
ALA
336
A
O
ALA
343
A
N
LEU
335
A
N
LEU
342
A
O
TRP
360
A
O
TRP
367
A
N
ILE
359
A
N
ILE
366
A
O
GLN
388
A
O
GLN
395
A
N
SER
177
A
N
SER
184
A
O
GLY
206
A
O
GLY
213
B
N
SER
6
B
N
SER
13
B
O
ARG
13
B
O
ARG
20
B
N
ILE
12
B
N
ILE
19
B
O
ARG
32
B
O
ARG
39
B
N
LEU
33
B
N
LEU
40
B
O
LYS
56
B
O
LYS
63
B
N
LEU
57
B
N
LEU
64
B
O
CYS
80
B
O
CYS
87
B
N
LEU
81
B
N
LEU
88
B
O
ASP
107
B
O
ASP
114
B
N
LEU
106
B
N
LEU
113
B
O
ASP
131
B
O
ASP
138
B
N
LEU
130
B
N
LEU
137
B
O
SER
159
B
O
SER
166
B
N
LEU
160
B
N
LEU
167
B
O
ASP
184
B
O
ASP
191
B
N
LEU
183
B
N
LEU
190
B
O
ASP
214
B
O
ASP
221
B
N
LEU
213
B
N
LEU
220
B
O
SER
239
B
O
SER
246
B
N
LEU
238
B
N
LEU
245
B
O
VAL
261
B
O
VAL
268
B
N
LEU
262
B
N
LEU
269
B
O
LYS
285
B
O
LYS
292
B
N
LEU
286
B
N
LEU
293
B
O
GLU
309
B
O
GLU
316
B
N
VAL
310
B
N
VAL
317
B
O
ALA
336
B
O
ALA
343
B
N
LEU
335
B
N
LEU
342
B
O
LYS
358
B
O
LYS
365
B
N
ILE
359
B
N
ILE
366
B
O
GLN
388
B
O
GLN
395
B
N
SER
177
B
N
SER
184
B
O
GLY
206
B
O
GLY
213
B
N
LEU
272
B
N
LEU
279
B
O
SER
295
B
O
SER
302
1
B
CG
ARG
322
B
CG
ARG
329
1
Y
1
B
CD
ARG
322
B
CD
ARG
329
1
Y
1
B
NE
ARG
322
B
NE
ARG
329
1
Y
1
B
CZ
ARG
322
B
CZ
ARG
329
1
Y
1
B
NH1
ARG
322
B
NH1
ARG
329
1
Y
1
B
NH2
ARG
322
B
NH2
ARG
329
1
Y
1
A
ALA
-6
A
ALA
1
1
Y
1
A
ASP
-5
A
ASP
2
1
Y
1
A
PRO
-4
A
PRO
3
1
Y
1
A
GLY
-3
A
GLY
4
1
Y
1
A
GLY
-2
A
GLY
5
1
Y
1
A
LYS
-1
A
LYS
6
1
Y
1
A
ALA
0
A
ALA
7
1
Y
1
A
SER
140
A
SER
147
1
Y
1
A
MET
141
A
MET
148
1
Y
1
A
LYS
142
A
LYS
149
1
Y
1
A
GLY
143
A
GLY
150
1
Y
1
A
THR
407
A
THR
414
1
Y
1
A
ALA
408
A
ALA
415
1
Y
1
A
SER
409
A
SER
416
1
Y
1
A
LEU
410
A
LEU
417
1
Y
1
A
VAL
411
A
VAL
418
1
Y
1
A
PRO
412
A
PRO
419
1
Y
1
A
ARG
413
A
ARG
420
1
Y
1
A
GLY
414
A
GLY
421
1
Y
1
A
SER
415
A
SER
422
1
Y
1
A
TRP
416
A
TRP
423
1
Y
1
A
SER
417
A
SER
424
1
Y
1
A
HIS
418
A
HIS
425
1
Y
1
A
PRO
419
A
PRO
426
1
Y
1
A
GLN
420
A
GLN
427
1
Y
1
A
PHE
421
A
PHE
428
1
Y
1
A
GLU
422
A
GLU
429
1
Y
1
A
LYS
423
A
LYS
430
1
Y
1
A
GLY
424
A
GLY
431
1
Y
1
A
SER
425
A
SER
432
1
Y
1
A
HIS
426
A
HIS
433
1
Y
1
A
HIS
427
A
HIS
434
1
Y
1
A
HIS
428
A
HIS
435
1
Y
1
A
HIS
429
A
HIS
436
1
Y
1
A
HIS
430
A
HIS
437
1
Y
1
A
HIS
431
A
HIS
438
1
Y
1
B
ALA
-6
B
ALA
1
1
Y
1
B
ASP
-5
B
ASP
2
1
Y
1
B
PRO
-4
B
PRO
3
1
Y
1
B
GLY
-3
B
GLY
4
1
Y
1
B
GLY
-2
B
GLY
5
1
Y
1
B
LYS
-1
B
LYS
6
1
Y
1
B
ALA
0
B
ALA
7
1
Y
1
B
SER
140
B
SER
147
1
Y
1
B
MET
141
B
MET
148
1
Y
1
B
LYS
142
B
LYS
149
1
Y
1
B
GLY
143
B
GLY
150
1
Y
1
B
PHE
325
B
PHE
332
1
Y
1
B
GLY
326
B
GLY
333
1
Y
1
B
PRO
327
B
PRO
334
1
Y
1
B
ILE
328
B
ILE
335
1
Y
1
B
VAL
329
B
VAL
336
1
Y
1
B
MET
330
B
MET
337
1
Y
1
B
ASN
331
B
ASN
338
1
Y
1
B
ARG
352
B
ARG
359
1
Y
1
B
LEU
353
B
LEU
360
1
Y
1
B
THR
407
B
THR
414
1
Y
1
B
ALA
408
B
ALA
415
1
Y
1
B
SER
409
B
SER
416
1
Y
1
B
LEU
410
B
LEU
417
1
Y
1
B
VAL
411
B
VAL
418
1
Y
1
B
PRO
412
B
PRO
419
1
Y
1
B
ARG
413
B
ARG
420
1
Y
1
B
GLY
414
B
GLY
421
1
Y
1
B
SER
415
B
SER
422
1
Y
1
B
TRP
416
B
TRP
423
1
Y
1
B
SER
417
B
SER
424
1
Y
1
B
HIS
418
B
HIS
425
1
Y
1
B
PRO
419
B
PRO
426
1
Y
1
B
GLN
420
B
GLN
427
1
Y
1
B
PHE
421
B
PHE
428
1
Y
1
B
GLU
422
B
GLU
429
1
Y
1
B
LYS
423
B
LYS
430
1
Y
1
B
GLY
424
B
GLY
431
1
Y
1
B
SER
425
B
SER
432
1
Y
1
B
HIS
426
B
HIS
433
1
Y
1
B
HIS
427
B
HIS
434
1
Y
1
B
HIS
428
B
HIS
435
1
Y
1
B
HIS
429
B
HIS
436
1
Y
1
B
HIS
430
B
HIS
437
1
Y
1
B
HIS
431
B
HIS
438
1
Y
1
B
B
O
OG
ILE
SER
373
377
2.12
1
A
A
NH1
O
ARG
HOH
401
605
2.14
1
A
A
O
OG
ILE
SER
373
377
2.18
1
B
B
O
O
SER
HOH
208
627
2.18
1
23.15
2.30
115.30
138.45
A
A
A
CA
CB
CG
LEU
LEU
LEU
303
303
303
N
1
21.08
1.50
119.30
140.38
A
A
A
C
N
CA
GLY
PRO
PRO
326
327
327
Y
1
-19.63
2.10
128.40
108.77
A
A
A
C
N
CD
GLY
PRO
PRO
326
327
327
Y
1
-9.79
1.50
119.30
109.51
A
A
A
C
N
CA
CYS
PRO
PRO
370
371
371
Y
1
18.13
2.30
115.30
133.43
B
B
B
CA
CB
CG
LEU
LEU
LEU
303
303
303
N
1
A
ASN
38
-126.17
-161.97
1
A
ARG
61
62.30
65.19
1
A
ASN
62
-136.77
-156.98
1
A
ASN
74
75.49
-18.19
1
A
SER
87
34.66
51.93
1
A
ASN
93
-146.88
18.86
1
A
LEU
124
-118.74
76.71
1
A
HIS
168
-151.33
-23.99
1
A
ASN
243
-103.43
-153.34
1
A
LEU
256
-115.58
76.63
1
A
ASN
267
-89.24
-154.01
1
A
ASN
291
-100.99
-151.98
1
A
LEU
303
74.96
-5.39
1
A
ASN
315
-123.85
-154.22
1
A
PRO
327
-3.34
-38.23
1
A
ASN
340
-150.41
-0.55
1
A
PRO
371
-72.53
33.49
1
A
ARG
372
-126.83
-50.58
1
B
ASN
38
-125.47
-163.74
1
B
LEU
51
-97.25
59.00
1
B
ARG
61
60.54
65.84
1
B
ASN
62
-136.87
-158.40
1
B
ASN
74
79.07
-13.67
1
B
LEU
75
-92.04
33.32
1
B
SER
87
32.78
49.72
1
B
ASN
93
-146.72
18.45
1
B
HIS
168
-148.67
-24.28
1
B
ASN
243
-104.96
-151.92
1
B
LEU
256
-115.03
74.10
1
B
ASN
267
-88.39
-154.27
1
B
ASN
291
-101.77
-154.24
1
B
LEU
303
75.91
-5.64
1
B
ASN
315
-122.41
-157.20
1
B
ASN
340
-150.96
0.44
1
B
PRO
371
-71.59
32.62
0.2473
0.2144
0.2161
2.399
47.819
2888
57040
5.06
99.60
0.32
1
1.36
MOLECULAR REPLACEMENT
26.28
0.90
1.11
PDB ENTRY 3W3G
ML
FLAT BULK SOLVENT MODEL
2.399
47.819
120
6532
180
0
6232
0.009
6552
1.501
8887
15.907
2414
0.101
1039
0.006
1110
0.3225
0.2927
2.4385
119
2481
97.0
0.3235
0.2742
2.4805
140
2585
100.0
0.2997
0.2699
2.5256
147
2534
100.0
0.3283
0.2567
2.5742
142
2519
100.0
0.2997
0.2625
2.6267
124
2559
100.0
0.3430
0.2768
2.6839
152
2538
100.0
0.2535
0.2628
2.7463
143
2565
100.0
0.3639
0.2640
2.8150
120
2583
100.0
0.2959
0.2671
2.8911
157
2521
100.0
0.3127
0.2699
2.9761
132
2548
100.0
0.2873
0.2672
3.0722
127
2595
100.0
0.2958
0.2510
3.1819
142
2554
100.0
0.2821
0.2497
3.3093
139
2602
100.0
0.2558
0.2233
3.4599
138
2573
100.0
0.2504
0.1981
3.6422
131
2602
100.0
0.1847
0.1647
3.8703
137
2554
100.0
0.1902
0.1573
4.1690
138
2628
100.0
0.1889
0.1623
4.5882
135
2605
100.0
0.2135
0.1629
5.2515
153
2621
100.0
0.2204
0.2066
6.6135
143
2650
99.0
0.2265
0.2134
47.8283
129
2735
97.0
2.399
91.820
4QDH
57289
57046
0.13
1
6.8
3.7
2.399
2.47
1.7
4388
0.73
1
3.7
99.4
data collection
Blu-Ice
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.8.1_1168)
data reduction
XDS
data scaling
XDS
Crystal Structure of the C-terminal Domain of Mouse TLR9
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
A
LYS
68
A
LYS
75
HELX_P
A
VAL
73
A
VAL
80
5
1
6
A
SER
149
A
SER
156
HELX_P
A
LEU
154
A
LEU
161
1
2
6
A
GLY
189
A
GLY
196
HELX_P
A
GLU
196
A
GLU
203
1
3
8
A
ARG
224
A
ARG
231
HELX_P
A
ASN
230
A
ASN
237
1
4
7
A
ASN
249
A
ASN
256
HELX_P
A
LEU
256
A
LEU
263
5
5
8
A
ILE
328
A
ILE
335
HELX_P
A
LEU
332
A
LEU
339
5
6
5
A
SER
369
A
SER
376
HELX_P
A
ASN
383
A
ASN
390
1
7
15
A
PRO
399
A
PRO
406
HELX_P
A
ILE
403
A
ILE
410
5
8
5
B
LYS
68
B
LYS
75
HELX_P
B
VAL
73
B
VAL
80
5
9
6
B
SER
149
B
SER
156
HELX_P
B
LEU
154
B
LEU
161
1
10
6
B
GLY
189
B
GLY
196
HELX_P
B
GLU
196
B
GLU
203
1
11
8
B
ARG
224
B
ARG
231
HELX_P
B
ASN
230
B
ASN
237
1
12
7
B
ASN
249
B
ASN
256
HELX_P
B
LEU
256
B
LEU
263
5
13
8
B
SER
369
B
SER
376
HELX_P
B
ASN
383
B
ASN
390
1
14
15
B
PRO
399
B
PRO
406
HELX_P
B
ILE
403
B
ILE
410
5
15
5
disulf
2.033
A
CYS
1
A
SG
CYS
8
1_555
A
CYS
7
A
SG
CYS
14
1_555
disulf
2.032
A
CYS
5
A
SG
CYS
12
1_555
A
CYS
14
A
SG
CYS
21
1_555
disulf
2.031
A
CYS
368
A
SG
CYS
375
1_555
A
CYS
393
A
SG
CYS
400
1_555
disulf
2.042
A
CYS
370
A
SG
CYS
377
1_555
A
CYS
405
A
SG
CYS
412
1_555
disulf
2.033
B
CYS
1
B
SG
CYS
8
1_555
B
CYS
7
B
SG
CYS
14
1_555
disulf
2.022
B
CYS
5
B
SG
CYS
12
1_555
B
CYS
14
B
SG
CYS
21
1_555
disulf
2.050
B
CYS
368
B
SG
CYS
375
1_555
B
CYS
393
B
SG
CYS
400
1_555
disulf
2.040
B
CYS
370
B
SG
CYS
377
1_555
B
CYS
405
B
SG
CYS
412
1_555
covale
1.454
one
N-Glycosylation
A
ASN
93
A
ND2
ASN
100
1_555
A
NAG
501
C
C1
NAG
1_555
covale
1.447
one
N-Glycosylation
A
ASN
147
A
ND2
ASN
154
1_555
A
NAG
502
D
C1
NAG
1_555
covale
1.439
one
N-Glycosylation
A
ASN
249
A
ND2
ASN
256
1_555
A
NAG
503
E
C1
NAG
1_555
covale
1.441
one
N-Glycosylation
A
ASN
274
A
ND2
ASN
281
1_555
A
NAG
504
F
C1
NAG
1_555
covale
1.465
one
N-Glycosylation
A
ASN
311
A
ND2
ASN
318
1_555
A
NAG
505
G
C1
NAG
1_555
covale
1.446
one
N-Glycosylation
B
ASN
93
B
ND2
ASN
100
1_555
B
NAG
501
L
C1
NAG
1_555
covale
1.453
one
N-Glycosylation
B
ASN
147
B
ND2
ASN
154
1_555
B
NAG
502
M
C1
NAG
1_555
covale
1.446
one
N-Glycosylation
B
ASN
249
B
ND2
ASN
256
1_555
B
NAG
503
N
C1
NAG
1_555
covale
1.449
one
N-Glycosylation
B
ASN
274
B
ND2
ASN
281
1_555
B
NAG
504
O
C1
NAG
1_555
covale
1.458
one
N-Glycosylation
B
ASN
311
B
ND2
ASN
318
1_555
B
NAG
505
P
C1
NAG
1_555
IMMUNE SYSTEM
glycosylation, IMMUNE SYSTEM
Q4G1L2_EPTBU
UNP
1
21
Q4G1L2
GKACPSRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLS
TLR9_MOUSE
UNP
1
480
Q9EQU3
LSRNNLVTIKPEMFVNLSRLQCLSLSHNSIAQAVNGSQFLPLTNLQVLDLSHNKLDLYHWKSFSELPQLQALDLSYNSQP
FSMKGIGHNFSFVTHLSMLQSLSLAHNDIHTRVSSHLNSNSVRFLDFSGNGMGRMWDEGGLYLHFFQGLSGLLKLDLSQN
NLHILRPQNLDNLPKSLKLLSLRDNYLSFFNWTSLSFLPNLEVLDLAGNQLKALTNGTLPNGTLLQKLDVSSNSIVSVVP
AFFALAVELKEVNLSHNILKTVDRSWFGPIVMNL
Q4G1L2_EPTBU
UNP
1
126
Q4G1L2
KELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSGSGKPVRSIICPT
21
81
4QDH
-2
58
Q4G1L2
A
1
5
65
480
753
4QDH
59
332
Q9EQU3
A
2
66
339
126
200
4QDH
333
407
Q4G1L2
A
3
340
414
21
81
4QDH
-2
58
Q4G1L2
B
1
5
65
480
753
4QDH
59
332
Q9EQU3
B
2
66
339
126
200
4QDH
333
407
Q4G1L2
B
3
340
414
1
expression tag
ALA
-6
4QDH
A
Q4G1L2
UNP
1
1
expression tag
ASP
-5
4QDH
A
Q4G1L2
UNP
2
1
expression tag
PRO
-4
4QDH
A
Q4G1L2
UNP
3
1
expression tag
GLY
-3
4QDH
A
Q4G1L2
UNP
4
3
expression tag
ALA
408
4QDH
A
Q4G1L2
UNP
415
3
expression tag
SER
409
4QDH
A
Q4G1L2
UNP
416
3
expression tag
LEU
410
4QDH
A
Q4G1L2
UNP
417
3
expression tag
VAL
411
4QDH
A
Q4G1L2
UNP
418
3
expression tag
PRO
412
4QDH
A
Q4G1L2
UNP
419
3
expression tag
ARG
413
4QDH
A
Q4G1L2
UNP
420
3
expression tag
GLY
414
4QDH
A
Q4G1L2
UNP
421
3
expression tag
SER
415
4QDH
A
Q4G1L2
UNP
422
3
expression tag
TRP
416
4QDH
A
Q4G1L2
UNP
423
3
expression tag
SER
417
4QDH
A
Q4G1L2
UNP
424
3
expression tag
HIS
418
4QDH
A
Q4G1L2
UNP
425
3
expression tag
PRO
419
4QDH
A
Q4G1L2
UNP
426
3
expression tag
GLN
420
4QDH
A
Q4G1L2
UNP
427
3
expression tag
PHE
421
4QDH
A
Q4G1L2
UNP
428
3
expression tag
GLU
422
4QDH
A
Q4G1L2
UNP
429
3
expression tag
LYS
423
4QDH
A
Q4G1L2
UNP
430
3
expression tag
GLY
424
4QDH
A
Q4G1L2
UNP
431
3
expression tag
SER
425
4QDH
A
Q4G1L2
UNP
432
3
expression tag
HIS
426
4QDH
A
Q4G1L2
UNP
433
3
expression tag
HIS
427
4QDH
A
Q4G1L2
UNP
434
3
expression tag
HIS
428
4QDH
A
Q4G1L2
UNP
435
3
expression tag
HIS
429
4QDH
A
Q4G1L2
UNP
436
3
expression tag
HIS
430
4QDH
A
Q4G1L2
UNP
437
3
expression tag
HIS
431
4QDH
A
Q4G1L2
UNP
438
4
expression tag
ALA
-6
4QDH
B
Q4G1L2
UNP
1
4
expression tag
ASP
-5
4QDH
B
Q4G1L2
UNP
2
4
expression tag
PRO
-4
4QDH
B
Q4G1L2
UNP
3
4
expression tag
GLY
-3
4QDH
B
Q4G1L2
UNP
4
6
expression tag
ALA
408
4QDH
B
Q4G1L2
UNP
415
6
expression tag
SER
409
4QDH
B
Q4G1L2
UNP
416
6
expression tag
LEU
410
4QDH
B
Q4G1L2
UNP
417
6
expression tag
VAL
411
4QDH
B
Q4G1L2
UNP
418
6
expression tag
PRO
412
4QDH
B
Q4G1L2
UNP
419
6
expression tag
ARG
413
4QDH
B
Q4G1L2
UNP
420
6
expression tag
GLY
414
4QDH
B
Q4G1L2
UNP
421
6
expression tag
SER
415
4QDH
B
Q4G1L2
UNP
422
6
expression tag
TRP
416
4QDH
B
Q4G1L2
UNP
423
6
expression tag
SER
417
4QDH
B
Q4G1L2
UNP
424
6
expression tag
HIS
418
4QDH
B
Q4G1L2
UNP
425
6
expression tag
PRO
419
4QDH
B
Q4G1L2
UNP
426
6
expression tag
GLN
420
4QDH
B
Q4G1L2
UNP
427
6
expression tag
PHE
421
4QDH
B
Q4G1L2
UNP
428
6
expression tag
GLU
422
4QDH
B
Q4G1L2
UNP
429
6
expression tag
LYS
423
4QDH
B
Q4G1L2
UNP
430
6
expression tag
GLY
424
4QDH
B
Q4G1L2
UNP
431
6
expression tag
SER
425
4QDH
B
Q4G1L2
UNP
432
6
expression tag
HIS
426
4QDH
B
Q4G1L2
UNP
433
6
expression tag
HIS
427
4QDH
B
Q4G1L2
UNP
434
6
expression tag
HIS
428
4QDH
B
Q4G1L2
UNP
435
6
expression tag
HIS
429
4QDH
B
Q4G1L2
UNP
436
6
expression tag
HIS
430
4QDH
B
Q4G1L2
UNP
437
6
expression tag
HIS
431
4QDH
B
Q4G1L2
UNP
438
17
2
17
2
2
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
SER
6
A
SER
13
A
SER
8
A
SER
15
A
GLU
11
A
GLU
18
A
ARG
13
A
ARG
20
A
ARG
32
A
ARG
39
A
GLU
34
A
GLU
41
A
LYS
56
A
LYS
63
A
SER
58
A
SER
65
A
CYS
80
A
CYS
87
A
SER
82
A
SER
89
A
VAL
105
A
VAL
112
A
ASP
107
A
ASP
114
A
ALA
129
A
ALA
136
A
ASP
131
A
ASP
138
A
SER
159
A
SER
166
A
SER
161
A
SER
168
A
PHE
182
A
PHE
189
A
ASP
184
A
ASP
191
A
LYS
212
A
LYS
219
A
ASP
214
A
ASP
221
A
LEU
237
A
LEU
244
A
SER
239
A
SER
246
A
VAL
261
A
VAL
268
A
ASP
263
A
ASP
270
A
LYS
285
A
LYS
292
A
ASP
287
A
ASP
294
A
GLU
309
A
GLU
316
A
ASN
311
A
ASN
318
A
GLU
334
A
GLU
341
A
ALA
336
A
ALA
343
A
LYS
358
A
LYS
365
A
TRP
360
A
TRP
367
A
GLU
387
A
GLU
394
A
GLN
388
A
GLN
395
A
ASN
176
A
ASN
183
A
SER
177
A
SER
184
A
GLY
206
A
GLY
213
A
LEU
207
A
LEU
214
B
SER
6
B
SER
13
B
SER
8
B
SER
15
B
GLU
11
B
GLU
18
B
ARG
13
B
ARG
20
B
ARG
32
B
ARG
39
B
GLU
34
B
GLU
41
B
LYS
56
B
LYS
63
B
SER
58
B
SER
65
B
CYS
80
B
CYS
87
B
SER
82
B
SER
89
B
VAL
105
B
VAL
112
B
ASP
107
B
ASP
114
B
ALA
129
B
ALA
136
B
ASP
131
B
ASP
138
B
SER
159
B
SER
166
B
SER
161
B
SER
168
B
PHE
182
B
PHE
189
B
ASP
184
B
ASP
191
B
LYS
212
B
LYS
219
B
ASP
214
B
ASP
221
B
LEU
237
B
LEU
244
B
SER
239
B
SER
246
B
VAL
261
B
VAL
268
B
ASP
263
B
ASP
270
B
LYS
285
B
LYS
292
B
ASP
287
B
ASP
294
B
GLU
309
B
GLU
316
B
ASN
311
B
ASN
318
B
GLU
334
B
GLU
341
B
ALA
336
B
ALA
343
B
LYS
358
B
LYS
365
B
TRP
360
B
TRP
367
B
GLU
387
B
GLU
394
B
GLN
388
B
GLN
395
B
ASN
176
B
ASN
183
B
SER
177
B
SER
184
B
GLY
206
B
GLY
213
B
LEU
207
B
LEU
214
B
ALA
271
B
ALA
278
B
LEU
272
B
LEU
279
B
SER
295
B
SER
302
B
VAL
296
B
VAL
303
152
P 31 2 1