0.009367 0.000000 0.001342 -0.000000 0.017334 0.000000 0.000000 -0.000000 0.029730 0.00000 0.00000 0.00000 Milaczewska, A.M. Chruszcz, M. Majorek, K.A. Porebski, P.J. Borowski, T. Anderson, W.F. 0000-0001-7075-7090 Minor, W. Center for Structural Genomics of Infectious Diseases (CSGID) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 98.15 90.00 106.761 57.690 33.980 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cd 2 112.411 CADMIUM ION non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CD N 75 N N N 76 S C N 77 N C N 78 N O N 79 N C N 80 N C N 81 N C N 82 N O N 83 N N N 84 N O N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N C N 102 N O N 103 N O N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N N N 115 N C N 116 N C N 117 N O N 118 N O N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N N N 125 S C N 126 N C N 127 N O N 128 N C Y 129 N C Y 130 N N Y 131 N C Y 132 N C Y 133 N N N 134 N O N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N O N 146 N H N 147 N H N 148 N N N 149 S C N 150 N C N 151 N O N 152 S C N 153 N C N 154 N C N 155 N C N 156 N O N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N N N 171 S C N 172 N C N 173 N O N 174 N C N 175 N C N 176 N C N 177 N C N 178 N O N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N N N 193 S C N 194 N C N 195 N O N 196 N C N 197 N C N 198 N C N 199 N C N 200 N N N 201 N O N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N N N 218 S C N 219 N C N 220 N O N 221 N C N 222 N C N 223 N S N 224 N C N 225 N O N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N N N 238 S C N 239 N C N 240 N O N 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C Y 247 N C N 248 N O N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N N N 261 S C N 262 N C N 263 N O N 264 N C N 265 N C N 266 N C N 267 N O N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N N N 278 S C N 279 N C N 280 N O N 281 N C N 282 N O N 283 N O N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 R C N 296 N O N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N N N 309 S C N 310 N C N 311 N O N 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N N Y 317 N C Y 318 N C Y 319 N C Y 320 N C Y 321 N C N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N N N 336 S C N 337 N C N 338 N O N 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C Y 345 N C N 346 N O N 347 N O N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C N 364 N C N 365 N C N 366 N O N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N sing Y 313 N doub N 314 N sing Y 315 N doub N 316 N sing Y 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing Y 332 N doub Y 333 N sing Y 334 N sing N 335 N sing Y 336 N doub N 337 N sing Y 338 N doub N 339 N sing Y 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing To be Published 0353 Acireductone dioxygenase from Bacillus anthracis with three cadmium ions 0000-0001-7075-7090 10.2210/pdb4qgl/pdb pdb_00004qgl 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 Beryllium Lenses CCD 2012-04-14 MARMOSAIC 300 mm CCD Diamond [111] SINGLE WAVELENGTH M x-ray 1 0.97857 1.0 21-ID-G APS 0.97857 SYNCHROTRON APS BEAMLINE 21-ID-G 19843.188 Acireductone dioxygenase 1.13.11.54, 1.13.11.53 1 man polymer 112.411 CADMIUM ION 3 syn non-polymer 18.015 water 32 nat water 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, DHK-MTPene dioxygenase, Acireductone dioxygenase (Fe(2+)-requiring), ARD', Fe-ARD, Acireductone dioxygenase (Ni(2+)-requiring), ARD, Ni-ARD no no GAAAMAQIRIHEVNTRIENEVKVSKFLQEEGVLYEKWNISKLPPHLNENYSLTDENKAEILAVFSKEIADVSARRGYKAH DVISLSNSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGTFFDVELEPGDLISVPENARHYFTLQDDRQVVA IRIFVTTEGWVPIY GAAAMAQIRIHEVNTRIENEVKVSKFLQEEGVLYEKWNISKLPPHLNENYSLTDENKAEILAVFSKEIADVSARRGYKAH DVISLSNSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGTFFDVELEPGDLISVPENARHYFTLQDDRQVVA IRIFVTTEGWVPIY A CSGID-IDP04136 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n anthrax,anthrax bacterium Ames Ancestor sample BAS3949, BA_4258, GBAA4258, GBAA_4258, mtnD 261594 Bacillus anthracis 511693 Escherichia coli BL21 CodonPlus DE3 RIPL plasmid pET15b 1 2.61 52.87 VAPOR DIFFUSION, SITTING DROP 9.0 Protein: 5.5mg/ml, in 50 mM Tris-HCl pH 7.8, 150mM NaCl, 1mM CdCl2, Crystallization condition: 62% Tacsimate pH=9.0, 15mM NaCl, 2% glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 289K 289 Center for Structural Genomics of Infectious Diseases CSGID software audit_author citation_author database_2 pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Structure summary Refinement description Database references Derived calculations Structure summary Data collection Refinement description 1 0 2014-06-18 1 1 2017-02-08 1 2 2017-11-22 1 3 2022-04-13 1 4 2023-09-20 _audit_author.identifier_ORCID _citation_author.identifier_ORCID _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y RCSB Y RCSB 2014-05-23 REL REL CD CADMIUM ION HOH water 1VR3 PDB experimental model CD 1 2 CD CD 201 A CD 2 2 CD CD 202 A CD 3 2 CD CD 203 A HOH 1 3 HOH HOH 301 A HOH 3 3 HOH HOH 302 A HOH 4 3 HOH HOH 303 A HOH 5 3 HOH HOH 304 A HOH 9 3 HOH HOH 305 A HOH 10 3 HOH HOH 306 A HOH 11 3 HOH HOH 307 A HOH 12 3 HOH HOH 308 A HOH 13 3 HOH HOH 309 A HOH 14 3 HOH HOH 310 A HOH 15 3 HOH HOH 311 A HOH 17 3 HOH HOH 312 A HOH 19 3 HOH HOH 313 A HOH 20 3 HOH HOH 314 A HOH 21 3 HOH HOH 315 A HOH 22 3 HOH HOH 316 A HOH 24 3 HOH HOH 317 A HOH 25 3 HOH HOH 318 A HOH 27 3 HOH HOH 319 A HOH 29 3 HOH HOH 320 A HOH 30 3 HOH HOH 321 A HOH 31 3 HOH HOH 322 A HOH 36 3 HOH HOH 323 A HOH 37 3 HOH HOH 324 A HOH 38 3 HOH HOH 325 A HOH 39 3 HOH HOH 326 A HOH 41 3 HOH HOH 327 A HOH 42 3 HOH HOH 328 A HOH 43 3 HOH HOH 329 A HOH 44 3 HOH HOH 330 A HOH 45 3 HOH HOH 331 A HOH 47 3 HOH HOH 332 A GLY -3 n 1 GLY -3 A ALA -2 n 2 ALA -2 A ALA -1 n 3 ALA -1 A ALA 0 n 4 ALA 0 A MET 1 n 5 MET 1 A ALA 2 n 6 ALA 2 A GLN 3 n 7 GLN 3 A ILE 4 n 8 ILE 4 A ARG 5 n 9 ARG 5 A ILE 6 n 10 ILE 6 A HIS 7 n 11 HIS 7 A GLU 8 n 12 GLU 8 A VAL 9 n 13 VAL 9 A ASN 10 n 14 ASN 10 A THR 11 n 15 THR 11 A ARG 12 n 16 ARG 12 A ILE 13 n 17 ILE 13 A GLU 14 n 18 GLU 14 A ASN 15 n 19 ASN 15 A GLU 16 n 20 GLU 16 A VAL 17 n 21 VAL 17 A LYS 18 n 22 LYS 18 A VAL 19 n 23 VAL 19 A SER 20 n 24 SER 20 A LYS 21 n 25 LYS 21 A PHE 22 n 26 PHE 22 A LEU 23 n 27 LEU 23 A GLN 24 n 28 GLN 24 A GLU 25 n 29 GLU 25 A GLU 26 n 30 GLU 26 A GLY 27 n 31 GLY 27 A VAL 28 n 32 VAL 28 A LEU 29 n 33 LEU 29 A TYR 30 n 34 TYR 30 A GLU 31 n 35 GLU 31 A LYS 32 n 36 LYS 32 A TRP 33 n 37 TRP 33 A ASN 34 n 38 ASN 34 A ILE 35 n 39 ILE 35 A SER 36 n 40 SER 36 A LYS 37 n 41 LYS 37 A LEU 38 n 42 LEU 38 A PRO 39 n 43 PRO 39 A PRO 40 n 44 PRO 40 A HIS 41 n 45 HIS 41 A LEU 42 n 46 LEU 42 A ASN 43 n 47 ASN 43 A GLU 44 n 48 GLU 44 A ASN 45 n 49 ASN 45 A TYR 46 n 50 TYR 46 A SER 47 n 51 SER 47 A LEU 48 n 52 LEU 48 A THR 49 n 53 THR 49 A ASP 50 n 54 ASP 50 A GLU 51 n 55 GLU 51 A ASN 52 n 56 ASN 52 A LYS 53 n 57 LYS 53 A ALA 54 n 58 ALA 54 A GLU 55 n 59 GLU 55 A ILE 56 n 60 ILE 56 A LEU 57 n 61 LEU 57 A ALA 58 n 62 ALA 58 A VAL 59 n 63 VAL 59 A PHE 60 n 64 PHE 60 A SER 61 n 65 SER 61 A LYS 62 n 66 LYS 62 A GLU 63 n 67 GLU 63 A ILE 64 n 68 ILE 64 A ALA 65 n 69 ALA 65 A ASP 66 n 70 ASP 66 A VAL 67 n 71 VAL 67 A SER 68 n 72 SER 68 A ALA 69 n 73 ALA 69 A ARG 70 n 74 ARG 70 A ARG 71 n 75 ARG 71 A GLY 72 n 76 GLY 72 A TYR 73 n 77 TYR 73 A LYS 74 n 78 LYS 74 A ALA 75 n 79 ALA 75 A HIS 76 n 80 HIS 76 A ASP 77 n 81 ASP 77 A VAL 78 n 82 VAL 78 A ILE 79 n 83 ILE 79 A SER 80 n 84 SER 80 A LEU 81 n 85 LEU 81 A SER 82 n 86 SER 82 A ASN 83 n 87 ASN 83 A SER 84 n 88 SER 84 A THR 85 n 89 THR 85 A PRO 86 n 90 PRO 86 A ASN 87 n 91 ASN 87 A LEU 88 n 92 LEU 88 A ASP 89 n 93 ASP 89 A GLU 90 n 94 GLU 90 A LEU 91 n 95 LEU 91 A LEU 92 n 96 LEU 92 A ILE 93 n 97 ILE 93 A ASN 94 n 98 ASN 94 A PHE 95 n 99 PHE 95 A GLN 96 n 100 GLN 96 A LYS 97 n 101 LYS 97 A GLU 98 n 102 GLU 98 A HIS 99 n 103 HIS 99 A HIS 100 n 104 HIS 100 A HIS 101 n 105 HIS 101 A THR 102 n 106 THR 102 A ASP 103 n 107 ASP 103 A ASP 104 n 108 ASP 104 A GLU 105 n 109 GLU 105 A VAL 106 n 110 VAL 106 A ARG 107 n 111 ARG 107 A PHE 108 n 112 PHE 108 A ILE 109 n 113 ILE 109 A VAL 110 n 114 VAL 110 A SER 111 n 115 SER 111 A GLY 112 n 116 GLY 112 A HIS 113 n 117 HIS 113 A GLY 114 n 118 GLY 114 A ILE 115 n 119 ILE 115 A PHE 116 n 120 PHE 116 A ALA 117 n 121 ALA 117 A ILE 118 n 122 ILE 118 A GLU 119 n 123 GLU 119 A GLY 120 n 124 GLY 120 A LYS 121 n 125 LYS 121 A ASP 122 n 126 ASP 122 A GLY 123 n 127 GLY 123 A THR 124 n 128 THR 124 A PHE 125 n 129 PHE 125 A PHE 126 n 130 PHE 126 A ASP 127 n 131 ASP 127 A VAL 128 n 132 VAL 128 A GLU 129 n 133 GLU 129 A LEU 130 n 134 LEU 130 A GLU 131 n 135 GLU 131 A PRO 132 n 136 PRO 132 A GLY 133 n 137 GLY 133 A ASP 134 n 138 ASP 134 A LEU 135 n 139 LEU 135 A ILE 136 n 140 ILE 136 A SER 137 n 141 SER 137 A VAL 138 n 142 VAL 138 A PRO 139 n 143 PRO 139 A GLU 140 n 144 GLU 140 A ASN 141 n 145 ASN 141 A ALA 142 n 146 ALA 142 A ARG 143 n 147 ARG 143 A HIS 144 n 148 HIS 144 A TYR 145 n 149 TYR 145 A PHE 146 n 150 PHE 146 A THR 147 n 151 THR 147 A LEU 148 n 152 LEU 148 A GLN 149 n 153 GLN 149 A ASP 150 n 154 ASP 150 A ASP 151 n 155 ASP 151 A ARG 152 n 156 ARG 152 A GLN 153 n 157 GLN 153 A VAL 154 n 158 VAL 154 A VAL 155 n 159 VAL 155 A ALA 156 n 160 ALA 156 A ILE 157 n 161 ILE 157 A ARG 158 n 162 ARG 158 A ILE 159 n 163 ILE 159 A PHE 160 n 164 PHE 160 A VAL 161 n 165 VAL 161 A THR 162 n 166 THR 162 A THR 163 n 167 THR 163 A GLU 164 n 168 GLU 164 A GLY 165 n 169 GLY 165 A TRP 166 n 170 TRP 166 A VAL 167 n 171 VAL 167 A PRO 168 n 172 PRO 168 A ILE 169 n 173 ILE 169 A TYR 170 n 174 TYR 170 A 0.7022 -0.1086 -0.1615 1.4289 0.5934 1.5531 -0.0254 0.0436 -0.0243 0.1755 0.0688 -0.0215 0.0336 0.0187 -0.0434 0.2675 0.0122 0.0162 0.3891 0.0044 0.0038 refined 34.8870 30.4940 19.6180 X-RAY DIFFRACTION A -3 A 170 X-RAY DIFFRACTION 1 author_and_software_defined_assembly PISA 1 monomeric A GLY -3 A O GLY 1 1_555 A CD 202 C CD CD 1_555 A HIS 113 A NE2 HIS 117 1_555 153.3 A GLY -3 A O GLY 1 1_555 A CD 202 C CD CD 1_555 A GLU 131 A OE2 GLU 135 1_555 82.1 A HIS 113 A NE2 HIS 117 1_555 A CD 202 C CD CD 1_555 A GLU 131 A OE2 GLU 135 1_555 106.9 A GLY -3 A O GLY 1 1_555 A CD 202 C CD CD 1_555 A GLU 131 A OE1 GLU 135 1_555 108.9 A HIS 113 A NE2 HIS 117 1_555 A CD 202 C CD CD 1_555 A GLU 131 A OE1 GLU 135 1_555 96.5 A GLU 131 A OE2 GLU 135 1_555 A CD 202 C CD CD 1_555 A GLU 131 A OE1 GLU 135 1_555 55.2 A HIS 99 A NE2 HIS 103 1_555 A CD 201 B CD CD 1_555 A HIS 101 A NE2 HIS 105 1_555 88.4 A HIS 99 A NE2 HIS 103 1_555 A CD 201 B CD CD 1_555 A GLU 105 A OE1 GLU 109 1_555 164.2 A HIS 101 A NE2 HIS 105 1_555 A CD 201 B CD CD 1_555 A GLU 105 A OE1 GLU 109 1_555 86.6 A HIS 99 A NE2 HIS 103 1_555 A CD 201 B CD CD 1_555 A HIS 144 A NE2 HIS 148 1_555 96.6 A HIS 101 A NE2 HIS 105 1_555 A CD 201 B CD CD 1_555 A HIS 144 A NE2 HIS 148 1_555 92.1 A GLU 105 A OE1 GLU 109 1_555 A CD 201 B CD CD 1_555 A HIS 144 A NE2 HIS 148 1_555 68.6 A HIS 99 A NE2 HIS 103 1_555 A CD 201 B CD CD 1_555 A HOH 301 E O HOH 1_555 91.0 A HIS 101 A NE2 HIS 105 1_555 A CD 201 B CD CD 1_555 A HOH 301 E O HOH 1_555 168.3 A GLU 105 A OE1 GLU 109 1_555 A CD 201 B CD CD 1_555 A HOH 301 E O HOH 1_555 96.9 A HIS 144 A NE2 HIS 148 1_555 A CD 201 B CD CD 1_555 A HOH 301 E O HOH 1_555 99.5 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ILE 13 A O ILE 17 A N ILE 4 A N ILE 8 A N GLN 3 A N GLN 7 A O GLU 129 A O GLU 133 A O PHE 126 A O PHE 130 A N ILE 118 A N ILE 122 A N ALA 117 A N ALA 121 A O TYR 145 A O TYR 149 A N GLU 31 A N GLU 35 A O LEU 135 A O LEU 139 A O ASP 134 A O ASP 138 A N ILE 109 A N ILE 113 A N VAL 110 A N VAL 114 A O VAL 155 A O VAL 159 A O PHE 160 A O PHE 164 A N ALA 75 A N ALA 79 1 A CG GLU 8 A CG GLU 12 1 Y 1 A CD GLU 8 A CD GLU 12 1 Y 1 A OE1 GLU 8 A OE1 GLU 12 1 Y 1 A OE2 GLU 8 A OE2 GLU 12 1 Y 1 A ASN 141 73.91 -2.12 30.418 1.14 0.00 7.51 -26.62 -0.00 25.48 0.945 0.902 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.22570 0.17605 0.17848 2.61 19.85 251 5103 5103 4.7 84.74 17.321 0.200 RANDOM 1 THROUGHOUT 0 0 MOLECULAR REPLACEMENT 0.071 0.80 0.80 1.20 1vr3 MAXIMUM LIKELIHOOD MASK 2.61 19.85 32 1434 3 0 1399 0.013 0.019 1430 0.001 0.020 1346 1.539 1.936 1941 0.845 3.000 3092 7.150 5.000 173 32.598 24.667 75 17.967 15.000 241 16.497 15.000 8 0.087 0.200 216 0.007 0.020 1634 0.001 0.020 338 0.328 0.267 2.672 17 325 325 20 76.68 40.41 2.6 50.0 4QGL 5354 5354 0.0 -3.0 0.111 0.111 1 11.987 2.3 85.6 0.511 2.6 2.64 2.390 250 0.511 1 2.2 85.6 phasing HKL-3000 phasing MOLREP refinement REFMAC 5.7.0029 data reduction HKL-3000 data scaling HKL-3000 Acireductone dioxygenase from Bacillus anthracis with three cadmium ions 1 N N 2 N N 2 N N 2 N N 3 N N A ASN 15 A ASN 19 HELX_P A GLU 26 A GLU 30 1 1 12 A ASN 34 A ASN 38 HELX_P A LEU 38 A LEU 42 5 2 5 A PRO 39 A PRO 43 HELX_P A ASN 43 A ASN 47 5 3 5 A THR 49 A THR 53 HELX_P A PHE 60 A PHE 64 1 4 12 A PHE 60 A PHE 64 HELX_P A GLY 72 A GLY 76 1 5 13 A ASN 87 A ASN 91 HELX_P A ILE 93 A ILE 97 1 6 7 A THR 162 A THR 166 HELX_P A VAL 167 A VAL 171 5 7 6 metalc 2.127 A GLY -3 A O GLY 1 1_555 A CD 202 C CD CD 1_555 metalc 2.358 A HIS 99 A NE2 HIS 103 1_555 A CD 201 B CD CD 1_555 metalc 2.277 A HIS 101 A NE2 HIS 105 1_555 A CD 201 B CD CD 1_555 metalc 2.276 A GLU 105 A OE1 GLU 109 1_555 A CD 201 B CD CD 1_555 metalc 2.287 A GLU 105 A OE2 GLU 109 1_555 A CD 203 D CD CD 1_555 metalc 2.655 A HIS 113 A NE2 HIS 117 1_555 A CD 202 C CD CD 1_555 metalc 2.311 A GLU 131 A OE2 GLU 135 1_555 A CD 202 C CD CD 1_555 metalc 2.377 A GLU 131 A OE1 GLU 135 1_555 A CD 202 C CD CD 1_555 metalc 2.600 A HIS 144 A NE2 HIS 148 1_555 A CD 201 B CD CD 1_555 metalc 2.350 A CD 201 B CD CD 1_555 A HOH 301 E O HOH 1_555 OXIDOREDUCTASE Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID, RmlC-like cupin, Oxidoreductase, Iron Binding, 1, 2-dihydroxy-5-(methylthio)pent-1-en-3-one dioxygenase MTND_BACAN UNP 1 1 Q81MI9 MAQIRIHEVNTRIENEVKVSKFLQEEGVLYEKWNISKLPPHLNENYSLTDENKAEILAVFSKEIADVSARRGYKAHDVIS LSNSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGTFFDVELEPGDLISVPENARHYFTLQDDRQVVAIRIF VTTEGWVPIY 1 170 4QGL 1 170 Q81MI9 A 1 5 174 1 expression tag GLY -3 4QGL A Q81MI9 UNP 1 1 expression tag ALA -2 4QGL A Q81MI9 UNP 2 1 expression tag ALA -1 4QGL A Q81MI9 UNP 3 1 expression tag ALA 0 4QGL A Q81MI9 UNP 4 5 5 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ARG 12 A ARG 16 A ILE 13 A ILE 17 A GLN 3 A GLN 7 A ILE 6 A ILE 10 A PHE 125 A PHE 129 A LEU 130 A LEU 134 A GLY 114 A GLY 118 A GLU 119 A GLU 123 A HIS 144 A HIS 148 A THR 147 A THR 151 A LEU 29 A LEU 33 A LYS 32 A LYS 36 A ASP 134 A ASP 138 A VAL 138 A VAL 142 A GLU 105 A GLU 109 A GLY 112 A GLY 116 A VAL 154 A VAL 158 A PHE 160 A PHE 164 A ALA 75 A ALA 79 A LEU 81 A LEU 85 BINDING SITE FOR RESIDUE CD A 201 A CD 201 Software 5 BINDING SITE FOR RESIDUE CD A 202 A CD 202 Software 4 BINDING SITE FOR RESIDUE CD A 203 A CD 203 Software 2 A HIS 99 A HIS 103 5 1_555 A HIS 101 A HIS 105 5 1_555 A GLU 105 A GLU 109 5 1_555 A HIS 144 A HIS 148 5 1_555 A HOH 301 E HOH 5 1_555 A GLY -3 A GLY 1 4 1_555 A GLU 25 A GLU 29 4 4_556 A HIS 113 A HIS 117 4 1_555 A GLU 131 A GLU 135 4 1_555 A GLU 105 A GLU 109 2 1_555 A HOH 301 E HOH 2 1_555 5 C 1 2 1