0.020161 0.000000 0.002475 0.000000 0.005882 0.000000 0.000000 0.000000 0.019716 0.00000 0.00000 0.00000 Tan, D. Tong, L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 97.00 90.00 49.600 170.000 51.100 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking Ca 2 40.078 CALCIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N N N 39 S C N 40 N C N 41 N O N 42 N C N 43 N O N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N N N 52 S C N 53 N C N 54 N O N 55 N C N 56 N C N 57 N C N 58 N N N 59 N C N 60 N N N 61 N N N 62 N O N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N N N 79 S C N 80 N C N 81 N O N 82 N C N 83 N C N 84 N O N 85 N N N 86 N O N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N O N 112 N P N 113 N O N 114 N O N 115 N O N 116 N C N 117 R C N 118 N O N 119 S C N 120 N O N 121 R C N 122 N O N 123 R C N 124 N N N 125 N C N 126 N O N 127 N N N 128 N C N 129 N N N 130 N C N 131 N C N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N CA N 147 N N N 148 R C N 149 N C N 150 N O N 151 N C N 152 N S N 153 N O N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N O N 162 N P N 163 N O N 164 N O N 165 N O N 166 N C N 167 R C N 168 N O N 169 S C N 170 N O N 171 R C N 172 N O N 173 R C Y 174 N N Y 175 N C Y 176 N N Y 177 N C N 178 N C N 179 N O N 180 N N N 181 N C N 182 N N N 183 N N Y 184 N C N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N N N 200 S C N 201 N C N 202 N O N 203 N C N 204 N C N 205 N C N 206 N O N 207 N N N 208 N O N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N N N 220 S C N 221 N C N 222 N O N 223 N C N 224 N C N 225 N C N 226 N O N 227 N O N 228 N O N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N N N 239 N C N 240 N C N 241 N O N 242 N O N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N N N 249 S C N 250 N C N 251 N O N 252 N C Y 253 N C Y 254 N N Y 255 N C Y 256 N C Y 257 N N N 258 N O N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N O N 270 N H N 271 N H N 272 N N N 273 S C N 274 N C N 275 N O N 276 S C N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 S C N 296 N C N 297 N O N 298 N C N 299 N C N 300 N C N 301 N C N 302 N O N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N N N 317 S C N 318 N C N 319 N O N 320 N C N 321 N C N 322 N C N 323 N C N 324 N N N 325 N O N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N N N 342 S C N 343 N C N 344 N O N 345 N C N 346 N C N 347 N S N 348 N C N 349 N O N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N N N 362 S C N 363 N C N 364 N O N 365 N C Y 366 N C Y 367 N C Y 368 N C Y 369 N C Y 370 N C Y 371 N C N 372 N O N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N N N 385 S C N 386 N C N 387 N O N 388 N C N 389 N C N 390 N C N 391 N O N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N N N 402 S C N 403 N C N 404 N O N 405 N C N 406 N O N 407 N O N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N N N 416 S C N 417 N C N 418 N O N 419 R C N 420 N O N 421 N C N 422 N O N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N N N 433 S C N 434 N C N 435 N O N 436 N C Y 437 N C Y 438 N C Y 439 N C Y 440 N N Y 441 N C Y 442 N C Y 443 N C Y 444 N C Y 445 N C N 446 N O N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N N N 460 S C N 461 N C N 462 N O N 463 N C Y 464 N C Y 465 N C Y 466 N C Y 467 N C Y 468 N C Y 469 N C N 470 N O N 471 N O N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N O N 484 N P N 485 N O N 486 N O N 487 N O N 488 N C N 489 R C N 490 N O N 491 S C N 492 N O N 493 R C N 494 N O N 495 R C N 496 N N N 497 N C N 498 N O N 499 N N N 500 N C N 501 N O N 502 N C N 503 N C N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N N N 518 S C N 519 N C N 520 N O N 521 N C N 522 N C N 523 N C N 524 N O N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N H N 535 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N doub N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing Y 182 N sing Y 183 N sing Y 184 N doub N 185 N sing Y 186 N sing N 187 N sing Y 188 N doub N 189 N doub N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N doub N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N doub N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N doub N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N doub N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N doub N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N sing N 254 N sing Y 255 N sing Y 256 N doub Y 257 N doub N 258 N sing Y 259 N sing N 260 N sing Y 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N doub N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N doub N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N doub N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing Y 363 N doub Y 364 N sing Y 365 N sing N 366 N sing Y 367 N doub N 368 N sing Y 369 N doub N 370 N sing Y 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N doub N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N doub N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N doub N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N doub N 428 N sing N 429 N sing N 430 N sing N 431 N sing Y 432 N doub Y 433 N sing Y 434 N sing N 435 N sing Y 436 N doub Y 437 N sing Y 438 N sing N 439 N sing Y 440 N sing Y 441 N doub N 442 N sing Y 443 N doub N 444 N sing Y 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N doub N 456 N sing N 457 N sing N 458 N sing N 459 N sing Y 460 N doub Y 461 N sing Y 462 N sing N 463 N sing Y 464 N doub N 465 N sing Y 466 N doub N 467 N sing Y 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N doub N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N doub N 500 N sing N 501 N sing N 502 N sing N 503 N doub N 504 N sing N 505 N doub N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N doub N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N sing US Nat.Struct.Mol.Biol. 1545-9993 21 679 685 10.1038/nsmb.2857 25026078 The ROQ domain of Roquin recognizes mRNA constitutive-decay element and double-stranded RNA. 2014 10.2210/pdb4qil/pdb pdb_00004qil 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 PIXEL 2013-11-21 DECTRIS PILATUS 6M Si(111) SINGLE WAVELENGTH M x-ray 1 1.100 1.0 X25 NSLS 1.100 SYNCHROTRON NSLS BEAMLINE X25 37214.434 Roquin-1 ROQ domain (UNP residues 88-407) 2 man polymer Hmgxb3 mRNA (Hmg19) 6070.634 5'-R(*CP*UP*CP*CP*CP*UP*UP*CP*UP*GP*UP*GP*AP*AP*GP*GP*GP*GP*A)-3' CDE stem-loop 2 syn polymer 40.078 CALCIUM ION 2 syn non-polymer 18.015 water 8 nat water Roquin, RING finger and C3H zinc finger protein 1, RING finger and CCCH-type zinc finger domain-containing protein 1, RING finger protein 198 no no MASGVEDTKHYEEAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERT VTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHV VQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQ TPASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQ QQLEHHHHHH MASGVEDTKHYEEAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERT VTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHV VQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQ TPASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQ QQLEHHHHHH A,B polypeptide(L) no no CUCCCUUCUGUGAAGGGGA CUCCCUUCUGUGAAGGGGA D,C polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample RC3H1, KIAA2025, RNF198 9606 Homo sapiens 511693 Escherichia coli BL21 plasmid pET24d 1 2.47 50.20 VAPOR DIFFUSION, SITTING DROP 8.2 0.1 M Tris-HCl, pH 8.2, 0.3 M calcium acetate, 12%-14% PEG8000, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 7.232 1 D 3 D 17 3.491 D_C3:G17_D 1 -6.216 -2.017 -0.632 0.151 3.639 1 19 D 4 D 16 1.837 D_C4:G16_D 2 -4.602 -0.341 0.217 0.004 3.325 1 19 D 5 D 15 0.023 D_C5:G15_D 3 -4.688 -0.503 0.147 -0.008 11.273 1 20 D 6 D 14 -1.116 D_U6:A14_D 4 -14.424 -0.191 0.115 -0.004 8.660 1 20 D 7 D 13 -0.942 D_U7:A13_D 5 0.793 -0.638 0.108 -0.117 29.401 1 19 D 8 D 12 2.359 D_C8:G12_D 6 -7.749 0.271 -0.483 0.010 7.028 1 19 C 3 C 17 -7.168 C_C3:G17_C 7 -10.186 -0.281 -0.022 -0.240 10.402 1 19 C 4 C 16 2.768 C_C4:G16_C 8 -9.533 -0.007 0.002 -0.039 7.344 1 19 C 5 C 15 -1.261 C_C5:G15_C 9 -4.838 -0.223 -0.135 -0.081 9.929 1 20 C 6 C 14 5.536 C_U6:A14_C 10 -8.608 -0.505 0.469 0.090 11.876 1 20 C 7 C 13 0.506 C_U7:A13_C 11 -7.732 0.353 -0.004 -0.028 24.219 1 19 C 8 C 12 5.784 C_C8:G12_C 12 -10.691 0.700 -0.340 -0.076 3.026 46.738 D D 3 4 10.779 D D 17 16 3.530 8.469 0.844 -1.530 DD_C3C4:G16G17_DD 1 -8.156 10.381 45.316 -2.649 -1.757 3.008 29.546 D D 4 5 5.489 D D 16 15 3.201 2.795 -0.167 -1.979 DD_C4C5:G15G16_DD 2 -1.340 2.631 29.386 -4.446 0.056 2.818 34.783 D D 5 6 7.283 D D 15 14 3.039 4.339 -0.276 -1.743 DD_C5U6:A14G15_DD 3 -2.873 4.822 34.404 -3.512 0.067 2.738 27.804 D D 6 7 15.327 D D 14 13 3.296 7.243 -0.405 -1.821 DD_U6U7:A13A14_DD 4 -5.024 10.632 26.395 -5.438 -0.300 2.267 31.269 D D 7 8 14.116 D D 13 12 2.732 7.526 0.082 -1.636 DD_U7C8:G12A13_DD 5 2.939 -5.512 30.232 -4.143 0.281 3.003 33.599 C C 3 4 5.222 C C 17 16 3.198 3.014 0.736 -1.681 CC_C3C4:G16G17_CC 6 -1.550 2.686 33.433 -3.377 -1.514 3.067 31.592 C C 4 5 6.749 C C 16 15 3.308 3.666 -0.128 -1.914 CC_C4C5:G15G16_CC 7 0.619 -1.139 31.378 -4.179 0.348 2.540 27.853 C C 5 6 12.988 C C 15 14 3.131 6.105 -0.280 -2.111 CC_C5U6:A14G15_CC 8 -8.447 17.968 25.866 -5.701 -1.239 2.820 37.144 C C 6 7 6.293 C C 14 13 3.001 4.001 -0.353 -1.600 CC_U6U7:A13A14_CC 9 -0.193 0.304 36.935 -2.989 0.531 2.257 31.676 C C 7 8 18.893 C C 13 12 2.931 10.129 0.104 -1.685 CC_U7C8:G12A13_CC 10 2.475 -4.616 29.952 -4.613 0.182 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_ref_seq_dif struct_site repository Initial release Database references Database references Data collection Database references Derived calculations Refinement description 1 0 2014-07-16 1 1 2014-07-30 1 2 2014-08-20 1 3 2023-09-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_label_asym_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Crystal structure of the ROQ domain of human Roquin in complex with the TNF23 RNA duplex RCSB Y RCSB 2014-05-31 REL REL CA CALCIUM ION HOH water 4QIK PDB ENTRY 4QIK PDB experimental model CA 2 3 CA CA 501 A CA 1 3 CA CA 501 B HOH 1 4 HOH HOH 601 A HOH 8 4 HOH HOH 602 A HOH 2 4 HOH HOH 601 B HOH 3 4 HOH HOH 602 B HOH 4 4 HOH HOH 603 B HOH 7 4 HOH HOH 604 B HOH 5 4 HOH HOH 101 D HOH 6 4 HOH HOH 102 D n 1 86 A n 2 87 A ALA 88 n 3 SER 88 A GLY 89 n 4 GLY 89 A VAL 90 n 5 VAL 90 A GLU 91 n 6 GLU 91 A ASP 92 n 7 ASP 92 A THR 93 n 8 THR 93 A LYS 94 n 9 LYS 94 A HIS 95 n 10 HIS 95 A TYR 96 n 11 TYR 96 A GLU 97 n 12 GLU 97 A GLU 98 n 13 GLU 98 A ALA 99 n 14 ALA 99 A LYS 100 n 15 LYS 100 A LYS 101 n 16 LYS 101 A CYS 102 n 17 CYS 102 A VAL 103 n 18 VAL 103 A GLU 104 n 19 GLU 104 A GLU 105 n 20 GLU 105 A LEU 106 n 21 LEU 106 A ALA 107 n 22 ALA 107 A LEU 108 n 23 LEU 108 A TYR 109 n 24 TYR 109 A LEU 110 n 25 LEU 110 A LYS 111 n 26 LYS 111 A n 27 112 A n 28 113 A n 29 114 A n 30 115 A n 31 116 A n 32 117 A n 33 118 A n 34 119 A n 35 120 A n 36 121 A n 37 122 A n 38 123 A n 39 124 A n 40 125 A GLN 126 n 41 GLN 126 A SER 127 n 42 SER 127 A VAL 128 n 43 VAL 128 A LEU 129 n 44 LEU 129 A SER 130 n 45 SER 130 A ARG 131 n 46 ARG 131 A PRO 132 n 47 PRO 132 A MET 133 n 48 MET 133 A GLN 134 n 49 GLN 134 A ARG 135 n 50 ARG 135 A LYS 136 n 51 LYS 136 A LEU 137 n 52 LEU 137 A VAL 138 n 53 VAL 138 A THR 139 n 54 THR 139 A LEU 140 n 55 LEU 140 A VAL 141 n 56 VAL 141 A HIS 142 n 57 HIS 142 A CYS 143 n 58 CYS 143 A GLN 144 n 59 GLN 144 A LEU 145 n 60 LEU 145 A VAL 146 n 61 VAL 146 A GLU 147 n 62 GLU 147 A GLU 148 n 63 GLU 148 A GLU 149 n 64 GLU 149 A GLY 150 n 65 GLY 150 A ARG 151 n 66 ARG 151 A ILE 152 n 67 ILE 152 A ARG 153 n 68 ARG 153 A ALA 154 n 69 ALA 154 A MET 155 n 70 MET 155 A ARG 156 n 71 ARG 156 A ALA 157 n 72 ALA 157 A ALA 158 n 73 ALA 158 A ARG 159 n 74 ARG 159 A SER 160 n 75 SER 160 A LEU 161 n 76 LEU 161 A GLY 162 n 77 GLY 162 A GLU 163 n 78 GLU 163 A ARG 164 n 79 ARG 164 A THR 165 n 80 THR 165 A VAL 166 n 81 VAL 166 A THR 167 n 82 THR 167 A GLU 168 n 83 GLU 168 A LEU 169 n 84 LEU 169 A ILE 170 n 85 ILE 170 A LEU 171 n 86 LEU 171 A GLN 172 n 87 GLN 172 A HIS 173 n 88 HIS 173 A GLN 174 n 89 GLN 174 A ASN 175 n 90 ASN 175 A PRO 176 n 91 PRO 176 A GLN 177 n 92 GLN 177 A GLN 178 n 93 GLN 178 A LEU 179 n 94 LEU 179 A SER 180 n 95 SER 180 A SER 181 n 96 SER 181 A ASN 182 n 97 ASN 182 A LEU 183 n 98 LEU 183 A TRP 184 n 99 TRP 184 A ALA 185 n 100 ALA 185 A ALA 186 n 101 ALA 186 A VAL 187 n 102 VAL 187 A ARG 188 n 103 ARG 188 A ALA 189 n 104 ALA 189 A ARG 190 n 105 ARG 190 A GLY 191 n 106 GLY 191 A CYS 192 n 107 CYS 192 A GLN 193 n 108 GLN 193 A PHE 194 n 109 PHE 194 A LEU 195 n 110 LEU 195 A GLY 196 n 111 GLY 196 A PRO 197 n 112 PRO 197 A ALA 198 n 113 ALA 198 A MET 199 n 114 MET 199 A GLN 200 n 115 GLN 200 A GLU 201 n 116 GLU 201 A GLU 202 n 117 GLU 202 A ALA 203 n 118 ALA 203 A LEU 204 n 119 LEU 204 A LYS 205 n 120 LYS 205 A LEU 206 n 121 LEU 206 A VAL 207 n 122 VAL 207 A LEU 208 n 123 LEU 208 A LEU 209 n 124 LEU 209 A ALA 210 n 125 ALA 210 A LEU 211 n 126 LEU 211 A GLU 212 n 127 GLU 212 A ASP 213 n 128 ASP 213 A GLY 214 n 129 GLY 214 A SER 215 n 130 SER 215 A ALA 216 n 131 ALA 216 A LEU 217 n 132 LEU 217 A SER 218 n 133 SER 218 A ARG 219 n 134 ARG 219 A LYS 220 n 135 LYS 220 A VAL 221 n 136 VAL 221 A LEU 222 n 137 LEU 222 A VAL 223 n 138 VAL 223 A LEU 224 n 139 LEU 224 A PHE 225 n 140 PHE 225 A VAL 226 n 141 VAL 226 A VAL 227 n 142 VAL 227 A GLN 228 n 143 GLN 228 A ARG 229 n 144 ARG 229 A LEU 230 n 145 LEU 230 A GLU 231 n 146 GLU 231 A PRO 232 n 147 PRO 232 A ARG 233 n 148 ARG 233 A PHE 234 n 149 PHE 234 A PRO 235 n 150 PRO 235 A GLN 236 n 151 GLN 236 A ALA 237 n 152 ALA 237 A SER 238 n 153 SER 238 A LYS 239 n 154 LYS 239 A THR 240 n 155 THR 240 A SER 241 n 156 SER 241 A ILE 242 n 157 ILE 242 A GLY 243 n 158 GLY 243 A HIS 244 n 159 HIS 244 A VAL 245 n 160 VAL 245 A VAL 246 n 161 VAL 246 A GLN 247 n 162 GLN 247 A LEU 248 n 163 LEU 248 A LEU 249 n 164 LEU 249 A TYR 250 n 165 TYR 250 A ARG 251 n 166 ARG 251 A ALA 252 n 167 ALA 252 A SER 253 n 168 SER 253 A CYS 254 n 169 CYS 254 A PHE 255 n 170 PHE 255 A LYS 256 n 171 LYS 256 A VAL 257 n 172 VAL 257 A THR 258 n 173 THR 258 A LYS 259 n 174 LYS 259 A ARG 260 n 175 ARG 260 A ASP 261 n 176 ASP 261 A GLU 262 n 177 GLU 262 A ASP 263 n 178 ASP 263 A SER 264 n 179 SER 264 A SER 265 n 180 SER 265 A LEU 266 n 181 LEU 266 A MET 267 n 182 MET 267 A GLN 268 n 183 GLN 268 A LEU 269 n 184 LEU 269 A LYS 270 n 185 LYS 270 A GLU 271 n 186 GLU 271 A GLU 272 n 187 GLU 272 A PHE 273 n 188 PHE 273 A ARG 274 n 189 ARG 274 A THR 275 n 190 THR 275 A TYR 276 n 191 TYR 276 A GLU 277 n 192 GLU 277 A ALA 278 n 193 ALA 278 A LEU 279 n 194 LEU 279 A ARG 280 n 195 ARG 280 A ARG 281 n 196 ARG 281 A GLU 282 n 197 GLU 282 A HIS 283 n 198 HIS 283 A ASP 284 n 199 ASP 284 A SER 285 n 200 SER 285 A GLN 286 n 201 GLN 286 A ILE 287 n 202 ILE 287 A VAL 288 n 203 VAL 288 A GLN 289 n 204 GLN 289 A ILE 290 n 205 ILE 290 A ALA 291 n 206 ALA 291 A MET 292 n 207 MET 292 A GLU 293 n 208 GLU 293 A ALA 294 n 209 ALA 294 A GLY 295 n 210 GLY 295 A LEU 296 n 211 LEU 296 A ARG 297 n 212 ARG 297 A ILE 298 n 213 ILE 298 A ALA 299 n 214 ALA 299 A PRO 300 n 215 PRO 300 A ASP 301 n 216 ASP 301 A GLN 302 n 217 GLN 302 A TRP 303 n 218 TRP 303 A SER 304 n 219 SER 304 A SER 305 n 220 SER 305 A LEU 306 n 221 LEU 306 A LEU 307 n 222 LEU 307 A TYR 308 n 223 TYR 308 A GLY 309 n 224 GLY 309 A ASP 310 n 225 ASP 310 A GLN 311 n 226 GLN 311 A SER 312 n 227 SER 312 A HIS 313 n 228 HIS 313 A LYS 314 n 229 LYS 314 A SER 315 n 230 SER 315 A HIS 316 n 231 HIS 316 A MET 317 n 232 MET 317 A GLN 318 n 233 GLN 318 A SER 319 n 234 SER 319 A ILE 320 n 235 ILE 320 A ILE 321 n 236 ILE 321 A ASP 322 n 237 ASP 322 A LYS 323 n 238 LYS 323 A LEU 324 n 239 LEU 324 A GLN 325 n 240 GLN 325 A THR 326 n 241 THR 326 A PRO 327 n 242 PRO 327 A ALA 328 n 243 ALA 328 A SER 329 n 244 SER 329 A PHE 330 n 245 PHE 330 A ALA 331 n 246 ALA 331 A GLN 332 n 247 GLN 332 A SER 333 n 248 SER 333 A VAL 334 n 249 VAL 334 A GLN 335 n 250 GLN 335 A GLU 336 n 251 GLU 336 A LEU 337 n 252 LEU 337 A THR 338 n 253 THR 338 A ILE 339 n 254 ILE 339 A ALA 340 n 255 ALA 340 A LEU 341 n 256 LEU 341 A GLN 342 n 257 GLN 342 A ARG 343 n 258 ARG 343 A THR 344 n 259 THR 344 A GLY 345 n 260 GLY 345 A ASP 346 n 261 ASP 346 A PRO 347 n 262 PRO 347 A ALA 348 n 263 ALA 348 A ASN 349 n 264 ASN 349 A LEU 350 n 265 LEU 350 A ASN 351 n 266 ASN 351 A ARG 352 n 267 ARG 352 A LEU 353 n 268 LEU 353 A ARG 354 n 269 ARG 354 A PRO 355 n 270 PRO 355 A HIS 356 n 271 HIS 356 A LEU 357 n 272 LEU 357 A GLU 358 n 273 GLU 358 A LEU 359 n 274 LEU 359 A LEU 360 n 275 LEU 360 A ALA 361 n 276 ALA 361 A ASN 362 n 277 ASN 362 A ILE 363 n 278 ILE 363 A ASP 364 n 279 ASP 364 A PRO 365 n 280 PRO 365 A SER 366 n 281 SER 366 A PRO 367 n 282 PRO 367 A ASP 368 n 283 ASP 368 A ALA 369 n 284 ALA 369 A PRO 370 n 285 PRO 370 A PRO 371 n 286 PRO 371 A PRO 372 n 287 PRO 372 A THR 373 n 288 THR 373 A TRP 374 n 289 TRP 374 A GLU 375 n 290 GLU 375 A GLN 376 n 291 GLN 376 A LEU 377 n 292 LEU 377 A GLU 378 n 293 GLU 378 A ASN 379 n 294 ASN 379 A GLY 380 n 295 GLY 380 A LEU 381 n 296 LEU 381 A VAL 382 n 297 VAL 382 A ALA 383 n 298 ALA 383 A VAL 384 n 299 VAL 384 A ARG 385 n 300 ARG 385 A THR 386 n 301 THR 386 A VAL 387 n 302 VAL 387 A VAL 388 n 303 VAL 388 A HIS 389 n 304 HIS 389 A GLY 390 n 305 GLY 390 A LEU 391 n 306 LEU 391 A VAL 392 n 307 VAL 392 A ASP 393 n 308 ASP 393 A TYR 394 n 309 TYR 394 A ILE 395 n 310 ILE 395 A GLN 396 n 311 GLN 396 A ASN 397 n 312 ASN 397 A HIS 398 n 313 HIS 398 A LEU 399 n 314 SER 399 A GLU 400 n 315 LYS 400 A n 316 401 A n 317 402 A n 318 403 A n 319 404 A n 320 405 A n 321 406 A n 322 407 A n 323 408 A n 324 409 A n 325 410 A n 326 411 A n 327 412 A n 328 413 A n 329 414 A n 330 415 A n 1 86 B n 2 87 B n 3 88 B n 4 89 B n 5 90 B n 6 91 B ASP 92 n 7 ASP 92 B THR 93 n 8 THR 93 B LYS 94 n 9 LYS 94 B HIS 95 n 10 HIS 95 B TYR 96 n 11 TYR 96 B GLU 97 n 12 GLU 97 B GLU 98 n 13 GLU 98 B ALA 99 n 14 ALA 99 B LYS 100 n 15 LYS 100 B LYS 101 n 16 LYS 101 B CYS 102 n 17 CYS 102 B VAL 103 n 18 VAL 103 B GLU 104 n 19 GLU 104 B GLU 105 n 20 GLU 105 B LEU 106 n 21 LEU 106 B ALA 107 n 22 ALA 107 B LEU 108 n 23 LEU 108 B TYR 109 n 24 TYR 109 B LEU 110 n 25 LEU 110 B LYS 111 n 26 LYS 111 B n 27 112 B n 28 113 B n 29 114 B n 30 115 B n 31 116 B n 32 117 B n 33 118 B n 34 119 B n 35 120 B n 36 121 B n 37 122 B n 38 123 B n 39 124 B n 40 125 B n 41 126 B n 42 127 B VAL 128 n 43 VAL 128 B LEU 129 n 44 LEU 129 B SER 130 n 45 SER 130 B ARG 131 n 46 ARG 131 B PRO 132 n 47 PRO 132 B MET 133 n 48 MET 133 B GLN 134 n 49 GLN 134 B ARG 135 n 50 ARG 135 B LYS 136 n 51 LYS 136 B LEU 137 n 52 LEU 137 B VAL 138 n 53 VAL 138 B THR 139 n 54 THR 139 B LEU 140 n 55 LEU 140 B VAL 141 n 56 VAL 141 B HIS 142 n 57 HIS 142 B CYS 143 n 58 CYS 143 B GLN 144 n 59 GLN 144 B LEU 145 n 60 LEU 145 B VAL 146 n 61 VAL 146 B GLU 147 n 62 GLU 147 B GLU 148 n 63 GLU 148 B GLU 149 n 64 GLU 149 B GLY 150 n 65 GLY 150 B ARG 151 n 66 ARG 151 B ILE 152 n 67 ILE 152 B ARG 153 n 68 ARG 153 B ALA 154 n 69 ALA 154 B MET 155 n 70 MET 155 B ARG 156 n 71 ARG 156 B ALA 157 n 72 ALA 157 B ALA 158 n 73 ALA 158 B ARG 159 n 74 ARG 159 B SER 160 n 75 SER 160 B LEU 161 n 76 LEU 161 B GLY 162 n 77 GLY 162 B GLU 163 n 78 GLU 163 B ARG 164 n 79 ARG 164 B THR 165 n 80 THR 165 B VAL 166 n 81 VAL 166 B THR 167 n 82 THR 167 B GLU 168 n 83 GLU 168 B LEU 169 n 84 LEU 169 B ILE 170 n 85 ILE 170 B LEU 171 n 86 LEU 171 B GLN 172 n 87 GLN 172 B HIS 173 n 88 HIS 173 B GLN 174 n 89 GLN 174 B ASN 175 n 90 ASN 175 B PRO 176 n 91 PRO 176 B GLN 177 n 92 GLN 177 B GLN 178 n 93 GLN 178 B LEU 179 n 94 LEU 179 B SER 180 n 95 SER 180 B SER 181 n 96 SER 181 B ASN 182 n 97 ASN 182 B LEU 183 n 98 LEU 183 B TRP 184 n 99 TRP 184 B ALA 185 n 100 ALA 185 B ALA 186 n 101 ALA 186 B VAL 187 n 102 VAL 187 B ARG 188 n 103 ARG 188 B ALA 189 n 104 ALA 189 B ARG 190 n 105 ARG 190 B GLY 191 n 106 GLY 191 B CYS 192 n 107 CYS 192 B GLN 193 n 108 GLN 193 B PHE 194 n 109 PHE 194 B LEU 195 n 110 LEU 195 B GLY 196 n 111 GLY 196 B PRO 197 n 112 PRO 197 B ALA 198 n 113 ALA 198 B MET 199 n 114 MET 199 B GLN 200 n 115 GLN 200 B GLU 201 n 116 GLU 201 B GLU 202 n 117 GLU 202 B ALA 203 n 118 ALA 203 B LEU 204 n 119 LEU 204 B LYS 205 n 120 LYS 205 B LEU 206 n 121 LEU 206 B VAL 207 n 122 VAL 207 B LEU 208 n 123 LEU 208 B LEU 209 n 124 LEU 209 B ALA 210 n 125 ALA 210 B LEU 211 n 126 LEU 211 B GLU 212 n 127 GLU 212 B ASP 213 n 128 ASP 213 B GLY 214 n 129 GLY 214 B SER 215 n 130 SER 215 B ALA 216 n 131 ALA 216 B LEU 217 n 132 LEU 217 B SER 218 n 133 SER 218 B ARG 219 n 134 ARG 219 B LYS 220 n 135 LYS 220 B VAL 221 n 136 VAL 221 B LEU 222 n 137 LEU 222 B VAL 223 n 138 VAL 223 B LEU 224 n 139 LEU 224 B PHE 225 n 140 PHE 225 B VAL 226 n 141 VAL 226 B VAL 227 n 142 VAL 227 B GLN 228 n 143 GLN 228 B ARG 229 n 144 ARG 229 B LEU 230 n 145 LEU 230 B GLU 231 n 146 GLU 231 B PRO 232 n 147 PRO 232 B ARG 233 n 148 ARG 233 B PHE 234 n 149 PHE 234 B PRO 235 n 150 PRO 235 B GLN 236 n 151 GLN 236 B ALA 237 n 152 ALA 237 B SER 238 n 153 SER 238 B LYS 239 n 154 LYS 239 B THR 240 n 155 THR 240 B SER 241 n 156 SER 241 B ILE 242 n 157 ILE 242 B GLY 243 n 158 GLY 243 B HIS 244 n 159 HIS 244 B VAL 245 n 160 VAL 245 B VAL 246 n 161 VAL 246 B GLN 247 n 162 GLN 247 B LEU 248 n 163 LEU 248 B LEU 249 n 164 LEU 249 B TYR 250 n 165 TYR 250 B ARG 251 n 166 ARG 251 B ALA 252 n 167 ALA 252 B SER 253 n 168 SER 253 B CYS 254 n 169 CYS 254 B PHE 255 n 170 PHE 255 B LYS 256 n 171 LYS 256 B VAL 257 n 172 VAL 257 B THR 258 n 173 THR 258 B LYS 259 n 174 LYS 259 B ARG 260 n 175 ARG 260 B ASP 261 n 176 ASP 261 B GLU 262 n 177 GLU 262 B ASP 263 n 178 ASP 263 B SER 264 n 179 SER 264 B SER 265 n 180 SER 265 B LEU 266 n 181 LEU 266 B MET 267 n 182 MET 267 B GLN 268 n 183 GLN 268 B LEU 269 n 184 LEU 269 B LYS 270 n 185 LYS 270 B GLU 271 n 186 GLU 271 B GLU 272 n 187 GLU 272 B PHE 273 n 188 PHE 273 B ARG 274 n 189 ARG 274 B THR 275 n 190 THR 275 B TYR 276 n 191 TYR 276 B GLU 277 n 192 GLU 277 B ALA 278 n 193 ALA 278 B LEU 279 n 194 LEU 279 B ARG 280 n 195 ARG 280 B ARG 281 n 196 ARG 281 B GLU 282 n 197 GLU 282 B HIS 283 n 198 HIS 283 B ASP 284 n 199 ASP 284 B SER 285 n 200 SER 285 B GLN 286 n 201 GLN 286 B ILE 287 n 202 ILE 287 B VAL 288 n 203 VAL 288 B GLN 289 n 204 GLN 289 B ILE 290 n 205 ILE 290 B ALA 291 n 206 ALA 291 B MET 292 n 207 MET 292 B GLU 293 n 208 GLU 293 B ALA 294 n 209 ALA 294 B GLY 295 n 210 GLY 295 B LEU 296 n 211 LEU 296 B ARG 297 n 212 ARG 297 B ILE 298 n 213 ILE 298 B ALA 299 n 214 ALA 299 B PRO 300 n 215 PRO 300 B ASP 301 n 216 ASP 301 B GLN 302 n 217 GLN 302 B TRP 303 n 218 TRP 303 B SER 304 n 219 SER 304 B SER 305 n 220 SER 305 B LEU 306 n 221 LEU 306 B LEU 307 n 222 LEU 307 B TYR 308 n 223 TYR 308 B GLY 309 n 224 GLY 309 B ASP 310 n 225 ASP 310 B GLN 311 n 226 GLN 311 B SER 312 n 227 SER 312 B HIS 313 n 228 HIS 313 B LYS 314 n 229 LYS 314 B SER 315 n 230 SER 315 B HIS 316 n 231 HIS 316 B MET 317 n 232 MET 317 B GLN 318 n 233 GLN 318 B SER 319 n 234 SER 319 B ILE 320 n 235 ILE 320 B ILE 321 n 236 ILE 321 B ASP 322 n 237 ASP 322 B LYS 323 n 238 LYS 323 B LEU 324 n 239 LEU 324 B GLN 325 n 240 GLN 325 B THR 326 n 241 THR 326 B PRO 327 n 242 PRO 327 B ALA 328 n 243 ALA 328 B SER 329 n 244 SER 329 B PHE 330 n 245 PHE 330 B ALA 331 n 246 ALA 331 B GLN 332 n 247 GLN 332 B SER 333 n 248 SER 333 B VAL 334 n 249 VAL 334 B GLN 335 n 250 GLN 335 B GLU 336 n 251 GLU 336 B LEU 337 n 252 LEU 337 B THR 338 n 253 THR 338 B ILE 339 n 254 ILE 339 B ALA 340 n 255 ALA 340 B LEU 341 n 256 LEU 341 B GLN 342 n 257 GLN 342 B ARG 343 n 258 ARG 343 B THR 344 n 259 THR 344 B GLY 345 n 260 GLY 345 B ASP 346 n 261 ASP 346 B PRO 347 n 262 PRO 347 B ALA 348 n 263 ALA 348 B ASN 349 n 264 ASN 349 B LEU 350 n 265 LEU 350 B ASN 351 n 266 ASN 351 B ARG 352 n 267 ARG 352 B LEU 353 n 268 LEU 353 B ARG 354 n 269 ARG 354 B PRO 355 n 270 PRO 355 B HIS 356 n 271 HIS 356 B LEU 357 n 272 LEU 357 B GLU 358 n 273 GLU 358 B LEU 359 n 274 LEU 359 B LEU 360 n 275 LEU 360 B ALA 361 n 276 ALA 361 B ASN 362 n 277 ASN 362 B ILE 363 n 278 ILE 363 B ASP 364 n 279 ASP 364 B PRO 365 n 280 PRO 365 B SER 366 n 281 SER 366 B PRO 367 n 282 PRO 367 B ASP 368 n 283 ASP 368 B ALA 369 n 284 ALA 369 B PRO 370 n 285 PRO 370 B PRO 371 n 286 PRO 371 B PRO 372 n 287 PRO 372 B THR 373 n 288 THR 373 B TRP 374 n 289 TRP 374 B GLU 375 n 290 GLU 375 B GLN 376 n 291 GLN 376 B LEU 377 n 292 LEU 377 B GLU 378 n 293 GLU 378 B ASN 379 n 294 ASN 379 B GLY 380 n 295 GLY 380 B LEU 381 n 296 LEU 381 B VAL 382 n 297 VAL 382 B ALA 383 n 298 ALA 383 B VAL 384 n 299 VAL 384 B ARG 385 n 300 ARG 385 B THR 386 n 301 THR 386 B VAL 387 n 302 VAL 387 B VAL 388 n 303 VAL 388 B HIS 389 n 304 HIS 389 B GLY 390 n 305 GLY 390 B LEU 391 n 306 LEU 391 B VAL 392 n 307 VAL 392 B ASP 393 n 308 ASP 393 B TYR 394 n 309 TYR 394 B ILE 395 n 310 ILE 395 B GLN 396 n 311 GLN 396 B ASN 397 n 312 ASN 397 B HIS 398 n 313 HIS 398 B LEU 399 n 314 SER 399 B n 315 400 B n 316 401 B n 317 402 B n 318 403 B n 319 404 B n 320 405 B n 321 406 B n 322 407 B n 323 408 B n 324 409 B n 325 410 B n 326 411 B n 327 412 B n 328 413 B n 329 414 B n 330 415 B n 1 1 D U 2 n 2 U 2 D C 3 n 3 C 3 D C 4 n 4 C 4 D C 5 n 5 C 5 D U 6 n 6 U 6 D U 7 n 7 U 7 D C 8 n 8 C 8 D U 9 n 9 U 9 D G 10 n 10 G 10 D U 11 n 11 U 11 D G 12 n 12 G 12 D A 13 n 13 A 13 D A 14 n 14 A 14 D G 15 n 15 G 15 D G 16 n 16 G 16 D G 17 n 17 G 17 D n 18 18 D n 19 19 D n 1 1 C U 2 n 2 U 2 C C 3 n 3 C 3 C C 4 n 4 C 4 C C 5 n 5 C 5 C U 6 n 6 U 6 C U 7 n 7 U 7 C C 8 n 8 C 8 C U 9 n 9 U 9 C G 10 n 10 G 10 C U 11 n 11 U 11 C G 12 n 12 G 12 C A 13 n 13 A 13 C A 14 n 14 A 14 C G 15 n 15 G 15 C G 16 n 16 G 16 C G 17 n 17 G 17 C n 18 18 C n 19 19 C author_and_software_defined_assembly PISA 2 dimeric author_and_software_defined_assembly PISA 2 dimeric 1990 -27 17540 1960 -26 16970 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 217 A N LEU 132 A O MET 267 A O MET 182 A O LEU 266 A O LEU 181 A N THR 258 A N THR 173 B N LEU 217 B N LEU 132 B O MET 267 B O MET 182 B O LEU 266 B O LEU 181 B N THR 258 B N THR 173 1 A OG SER 88 A OG SER 3 1 Y 1 A MET 86 A MET 1 1 Y 1 A ALA 87 A ALA 2 1 Y 1 A PRO 112 A PRO 27 1 Y 1 A LEU 113 A LEU 28 1 Y 1 A SER 114 A SER 29 1 Y 1 A SER 115 A SER 30 1 Y 1 A ALA 116 A ALA 31 1 Y 1 A ARG 117 A ARG 32 1 Y 1 A GLY 118 A GLY 33 1 Y 1 A VAL 119 A VAL 34 1 Y 1 A GLY 120 A GLY 35 1 Y 1 A LEU 121 A LEU 36 1 Y 1 A ASN 122 A ASN 37 1 Y 1 A SER 123 A SER 38 1 Y 1 A THR 124 A THR 39 1 Y 1 A THR 125 A THR 40 1 Y 1 A LYS 401 A LYS 316 1 Y 1 A GLY 402 A GLY 317 1 Y 1 A ALA 403 A ALA 318 1 Y 1 A ASP 404 A ASP 319 1 Y 1 A GLN 405 A GLN 320 1 Y 1 A GLN 406 A GLN 321 1 Y 1 A GLN 407 A GLN 322 1 Y 1 A LEU 408 A LEU 323 1 Y 1 A GLU 409 A GLU 324 1 Y 1 A HIS 410 A HIS 325 1 Y 1 A HIS 411 A HIS 326 1 Y 1 A HIS 412 A HIS 327 1 Y 1 A HIS 413 A HIS 328 1 Y 1 A HIS 414 A HIS 329 1 Y 1 A HIS 415 A HIS 330 1 Y 1 B MET 86 B MET 1 1 Y 1 B ALA 87 B ALA 2 1 Y 1 B SER 88 B SER 3 1 Y 1 B GLY 89 B GLY 4 1 Y 1 B VAL 90 B VAL 5 1 Y 1 B GLU 91 B GLU 6 1 Y 1 B PRO 112 B PRO 27 1 Y 1 B LEU 113 B LEU 28 1 Y 1 B SER 114 B SER 29 1 Y 1 B SER 115 B SER 30 1 Y 1 B ALA 116 B ALA 31 1 Y 1 B ARG 117 B ARG 32 1 Y 1 B GLY 118 B GLY 33 1 Y 1 B VAL 119 B VAL 34 1 Y 1 B GLY 120 B GLY 35 1 Y 1 B LEU 121 B LEU 36 1 Y 1 B ASN 122 B ASN 37 1 Y 1 B SER 123 B SER 38 1 Y 1 B THR 124 B THR 39 1 Y 1 B THR 125 B THR 40 1 Y 1 B GLN 126 B GLN 41 1 Y 1 B SER 127 B SER 42 1 Y 1 B LYS 400 B LYS 315 1 Y 1 B LYS 401 B LYS 316 1 Y 1 B GLY 402 B GLY 317 1 Y 1 B ALA 403 B ALA 318 1 Y 1 B ASP 404 B ASP 319 1 Y 1 B GLN 405 B GLN 320 1 Y 1 B GLN 406 B GLN 321 1 Y 1 B GLN 407 B GLN 322 1 Y 1 B LEU 408 B LEU 323 1 Y 1 B GLU 409 B GLU 324 1 Y 1 B HIS 410 B HIS 325 1 Y 1 B HIS 411 B HIS 326 1 Y 1 B HIS 412 B HIS 327 1 Y 1 B HIS 413 B HIS 328 1 Y 1 B HIS 414 B HIS 329 1 Y 1 B HIS 415 B HIS 330 1 Y 1 D C 1 C C 1 1 Y 1 D G 18 C G 18 1 Y 1 D A 19 C A 19 1 Y 1 C C 1 D C 1 1 Y 1 C G 18 D G 18 1 Y 1 C A 19 D A 19 1 Y 1 B D NH1 OP1 ARG G 251 12 2.11 1 B B OG1 NH1 THR ARG 338 354 2.12 1 A ASP 346 53.16 71.78 1 A ASP 368 58.22 3.58 1 A SER 399 -102.48 -154.92 1 B ASP 346 58.92 76.39 0.2509 0.1948 0.1976 2.900 37.696 872 18578 17984 4.85 96.78 0.40 RANDOM 1 1.38 MOLECULAR REPLACEMENT 28.57 0.90 1.11 PDB ENTRY 4QIK ML FLAT BULK SOLVENT MODEL 2.900 37.696 8 5385 2 678 4697 0.010 5535 1.374 7640 15.666 2212 0.055 903 0.007 874 0.3730 0.2907 3.0816 143 2572 88.0 0.3599 0.2495 3.3194 143 2901 98.0 0.3126 0.2064 3.6532 172 2867 99.0 0.2302 0.1802 4.1813 134 2941 99.0 0.2096 0.1737 5.2657 135 2907 99.0 0.1941 0.1707 37.6994 145 2924 98.0 2.9 50 4QIL 18578 17984 2 2 0.094 1 9.1 2.1 96.8 0.415 2.9 3.0 1.7 1 1.9 88.4 data collection CBASS phasing COMO refinement PHENIX (phenix.refine: 1.8.4_1496) data reduction HKL-2000 data scaling SCALEPACK Crystal structure of the ROQ domain of human Roquin in complex with the Hmg19 stem-loop RNA 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N 4 N N 4 N N 4 N N A GLY 89 A GLY 4 HELX_P A LEU 108 A LEU 23 1 1 20 A SER 130 A SER 45 HELX_P A CYS 143 A CYS 58 1 2 14 A GLU 147 A GLU 62 HELX_P A HIS 173 A HIS 88 1 3 27 A GLN 178 A GLN 93 HELX_P A ARG 190 A ARG 105 1 4 13 A GLY 196 A GLY 111 HELX_P A GLU 212 A GLU 127 1 5 17 A ARG 219 A ARG 134 HELX_P A GLU 231 A GLU 146 1 6 13 A SER 238 A SER 153 HELX_P A ALA 252 A ALA 167 1 7 15 A GLU 271 A GLU 186 HELX_P A ARG 274 A ARG 189 5 8 4 A THR 275 A THR 190 HELX_P A ALA 294 A ALA 209 1 9 20 A ALA 299 A ALA 214 HELX_P A GLY 309 A GLY 224 1 10 11 A HIS 313 A HIS 228 HELX_P A LEU 324 A LEU 239 1 11 12 A PRO 327 A PRO 242 HELX_P A LEU 341 A LEU 256 1 12 15 A ASN 349 A ASN 264 HELX_P A ARG 352 A ARG 267 5 13 4 A LEU 353 A LEU 268 HELX_P A ASN 362 A ASN 277 1 14 10 A THR 373 A THR 288 HELX_P A HIS 398 A HIS 313 1 15 26 B THR 93 B THR 8 HELX_P B LEU 108 B LEU 23 1 16 16 B TYR 109 B TYR 24 HELX_P B LYS 111 B LYS 26 5 17 3 B SER 130 B SER 45 HELX_P B CYS 143 B CYS 58 1 18 14 B GLU 147 B GLU 62 HELX_P B HIS 173 B HIS 88 1 19 27 B ASN 175 B ASN 90 HELX_P B GLN 177 B GLN 92 5 20 3 B GLN 178 B GLN 93 HELX_P B ARG 190 B ARG 105 1 21 13 B GLY 196 B GLY 111 HELX_P B GLU 212 B GLU 127 1 22 17 B ARG 219 B ARG 134 HELX_P B GLU 231 B GLU 146 1 23 13 B SER 238 B SER 153 HELX_P B ALA 252 B ALA 167 1 24 15 B GLU 271 B GLU 186 HELX_P B ARG 274 B ARG 189 5 25 4 B THR 275 B THR 190 HELX_P B ALA 294 B ALA 209 1 26 20 B ALA 299 B ALA 214 HELX_P B GLY 309 B GLY 224 1 27 11 B HIS 313 B HIS 228 HELX_P B GLN 325 B GLN 240 1 28 13 B PRO 327 B PRO 242 HELX_P B THR 344 B THR 259 1 29 18 B ASN 349 B ASN 264 HELX_P B ARG 352 B ARG 267 5 30 4 B LEU 353 B LEU 268 HELX_P B ASN 362 B ASN 277 1 31 10 B THR 373 B THR 288 HELX_P B SER 399 B SER 314 1 32 27 metalc 2.903 A GLU 262 A O GLU 177 1_555 A CA 501 E CA CA 1_555 metalc 2.580 B GLU 262 B O GLU 177 1_555 B CA 501 F CA CA 1_555 hydrog C-G PAIR D C 3 C O2 C 3 1_555 D G 17 C N2 G 17 1_555 hydrog WATSON-CRICK D C 4 C N3 C 4 1_555 D G 16 C N1 G 16 1_555 hydrog WATSON-CRICK D C 4 C N4 C 4 1_555 D G 16 C O6 G 16 1_555 hydrog WATSON-CRICK D C 4 C O2 C 4 1_555 D G 16 C N2 G 16 1_555 hydrog WATSON-CRICK D C 5 C N3 C 5 1_555 D G 15 C N1 G 15 1_555 hydrog WATSON-CRICK D C 5 C N4 C 5 1_555 D G 15 C O6 G 15 1_555 hydrog WATSON-CRICK D C 5 C O2 C 5 1_555 D G 15 C N2 G 15 1_555 hydrog WATSON-CRICK D U 6 C N3 U 6 1_555 D A 14 C N1 A 14 1_555 hydrog WATSON-CRICK D U 6 C O4 U 6 1_555 D A 14 C N6 A 14 1_555 hydrog WATSON-CRICK D U 7 C N3 U 7 1_555 D A 13 C N1 A 13 1_555 hydrog WATSON-CRICK D U 7 C O4 U 7 1_555 D A 13 C N6 A 13 1_555 hydrog WATSON-CRICK D C 8 C N3 C 8 1_555 D G 12 C N1 G 12 1_555 hydrog WATSON-CRICK D C 8 C N4 C 8 1_555 D G 12 C O6 G 12 1_555 hydrog WATSON-CRICK D C 8 C O2 C 8 1_555 D G 12 C N2 G 12 1_555 hydrog WATSON-CRICK C C 3 D N3 C 3 1_555 C G 17 D N1 G 17 1_555 hydrog WATSON-CRICK C C 3 D N4 C 3 1_555 C G 17 D O6 G 17 1_555 hydrog WATSON-CRICK C C 3 D O2 C 3 1_555 C G 17 D N2 G 17 1_555 hydrog WATSON-CRICK C C 4 D N3 C 4 1_555 C G 16 D N1 G 16 1_555 hydrog WATSON-CRICK C C 4 D N4 C 4 1_555 C G 16 D O6 G 16 1_555 hydrog WATSON-CRICK C C 4 D O2 C 4 1_555 C G 16 D N2 G 16 1_555 hydrog WATSON-CRICK C C 5 D N3 C 5 1_555 C G 15 D N1 G 15 1_555 hydrog WATSON-CRICK C C 5 D N4 C 5 1_555 C G 15 D O6 G 15 1_555 hydrog WATSON-CRICK C C 5 D O2 C 5 1_555 C G 15 D N2 G 15 1_555 hydrog WATSON-CRICK C U 6 D N3 U 6 1_555 C A 14 D N1 A 14 1_555 hydrog WATSON-CRICK C U 6 D O4 U 6 1_555 C A 14 D N6 A 14 1_555 hydrog WATSON-CRICK C U 7 D N3 U 7 1_555 C A 13 D N1 A 13 1_555 hydrog WATSON-CRICK C U 7 D O4 U 7 1_555 C A 13 D N6 A 13 1_555 hydrog WATSON-CRICK C C 8 D N3 C 8 1_555 C G 12 D N1 G 12 1_555 hydrog WATSON-CRICK C C 8 D N4 C 8 1_555 C G 12 D O6 G 12 1_555 hydrog WATSON-CRICK C C 8 D O2 C 8 1_555 C G 12 D N2 G 12 1_555 RNA BINDING PROTEIN/RNA Winged-helix motif, mRNA stem-loop, mRNA decay, immune responses, autoimmunity, RNA BINDING PROTEIN-RNA complex A LEU 110 A LEU 25 1 A LYS 111 A LYS 26 -16.91 RC3H1_HUMAN UNP 1 88 Q5TC82 SGVEDTKHYEEAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVT ELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQ LLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTP ASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQ 4QIL PDB 2 1 4QIL CUCCCUUCUGUGAAGGGGA 88 407 4QIL 88 407 Q5TC82 A 1 3 322 88 407 4QIL 88 407 Q5TC82 B 1 3 322 1 19 4QIL 1 19 4QIL D 2 1 19 1 19 4QIL 1 19 4QIL C 2 1 19 1 expression tag MET 86 4QIL A Q5TC82 UNP 1 1 expression tag ALA 87 4QIL A Q5TC82 UNP 2 1 expression tag LEU 408 4QIL A Q5TC82 UNP 323 1 expression tag GLU 409 4QIL A Q5TC82 UNP 324 1 expression tag HIS 410 4QIL A Q5TC82 UNP 325 1 expression tag HIS 411 4QIL A Q5TC82 UNP 326 1 expression tag HIS 412 4QIL A Q5TC82 UNP 327 1 expression tag HIS 413 4QIL A Q5TC82 UNP 328 1 expression tag HIS 414 4QIL A Q5TC82 UNP 329 1 expression tag HIS 415 4QIL A Q5TC82 UNP 330 2 expression tag MET 86 4QIL B Q5TC82 UNP 1 2 expression tag ALA 87 4QIL B Q5TC82 UNP 2 2 expression tag LEU 408 4QIL B Q5TC82 UNP 323 2 expression tag GLU 409 4QIL B Q5TC82 UNP 324 2 expression tag HIS 410 4QIL B Q5TC82 UNP 325 2 expression tag HIS 411 4QIL B Q5TC82 UNP 326 2 expression tag HIS 412 4QIL B Q5TC82 UNP 327 2 expression tag HIS 413 4QIL B Q5TC82 UNP 328 2 expression tag HIS 414 4QIL B Q5TC82 UNP 329 2 expression tag HIS 415 4QIL B Q5TC82 UNP 330 3 3 anti-parallel anti-parallel anti-parallel anti-parallel A LEU 217 A LEU 132 A SER 218 A SER 133 A LEU 266 A LEU 181 A LEU 269 A LEU 184 A PHE 255 A PHE 170 A THR 258 A THR 173 B LEU 217 B LEU 132 B SER 218 B SER 133 B ASP 263 B ASP 178 B LEU 269 B LEU 184 B PHE 255 B PHE 170 B ARG 260 B ARG 175 BINDING SITE FOR RESIDUE CA A 501 A CA 501 Software 3 BINDING SITE FOR RESIDUE CA B 501 B CA 501 Software 3 A GLU 262 A GLU 177 3 1_555 A ASP 393 A ASP 308 3 1_454 A HIS 398 A HIS 313 3 1_454 B GLU 262 B GLU 177 3 1_555 B ASP 393 B ASP 308 3 1_656 B HIS 398 B HIS 313 3 1_656 4 P 1 21 1