0.019508 0.000000 0.000000 -0.000000 0.018477 0.000000 0.000000 -0.000000 0.013474 0.00000 0.00000 0.00000 Skalova, T. Blaha, J. Harlos, K. Duskova, J. Koval, T. Stransky, J. Hasek, J. Vanek, O. Dohnalek, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 51.260 54.120 74.220 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 R C N 231 R C N 232 R C N 233 S C N 234 R C N 235 N C N 236 N C N 237 N C N 238 N N N 239 N O N 240 N O N 241 N O N 242 N O N 243 N O N 244 N O N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N N N 261 S C N 262 N C N 263 N O N 264 N C Y 265 N C Y 266 N C Y 267 N C Y 268 N C Y 269 N C Y 270 N C N 271 N O N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N N N 284 S C N 285 N C N 286 N O N 287 N C N 288 N C N 289 N C N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N N N 301 S C N 302 N C N 303 N O N 304 N C N 305 N O N 306 N O N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N N N 315 S C N 316 N C N 317 N O N 318 R C N 319 N O N 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 N C Y 336 N C Y 337 N C Y 338 N C Y 339 N N Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C N 345 N O N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C Y 363 N C Y 364 N C Y 365 N C Y 366 N C Y 367 N C Y 368 N C N 369 N O N 370 N O N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N N N 383 S C N 384 N C N 385 N O N 386 N C N 387 N C N 388 N C N 389 N O N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N doub N 255 N sing N 256 N sing N 257 N sing N 258 N sing Y 259 N doub Y 260 N sing Y 261 N sing N 262 N sing Y 263 N doub N 264 N sing Y 265 N doub N 266 N sing Y 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N doub N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing Y 328 N doub Y 329 N sing Y 330 N sing N 331 N sing Y 332 N doub Y 333 N sing Y 334 N sing N 335 N sing Y 336 N sing Y 337 N doub N 338 N sing Y 339 N doub N 340 N sing Y 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing Y 356 N doub Y 357 N sing Y 358 N sing N 359 N sing Y 360 N doub N 361 N sing Y 362 N doub N 363 N sing Y 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N doub N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 71 578 591 10.1107/S1399004714027928 25760607 Four crystal structures of human LLT1, a ligand of human NKR-P1, in varied glycosylation and oligomerization states 2015 10.2210/pdb4qki/pdb pdb_00004qki 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 Kirkpatrick Baez mirror pair PIXEL 2012-06-30 DECTRIS PILATUS 2M Si(111) double crystal SINGLE WAVELENGTH M x-ray 1 0.9200 1.0 I02 Diamond 0.9200 SYNCHROTRON DIAMOND BEAMLINE I02 15692.363 C-type lectin domain family 2 member D extracellular part, UNP residues 72-191 H176C 2 man polymer 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose 4 man non-polymer 18.015 water 167 nat water Lectin-like NK cell receptor, Lectin-like transcript 1, LLT-1, Osteoclast inhibitory lectin no no ITGQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKWING TEWTRQFPILGAGECAYLNDKGASSARCYTERKWICSKSDIHVGTKHHHHHHHHG ITGQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKWING TEWTRQFPILGAGECAYLNDKGASSARCYTERKWICSKSDIHVGTKHHHHHHHHG A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human protein secreted into medium human sample CLAX, CLEC2B, CLEC2D, LLT1, OCIL 9606 Homo sapiens HEK293S GnTI- 9606 HOMO SAPIENS plasmid pTT28 1 1.64 25.00 THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS COLUMNS. VAPOR DIFFUSION, SITTING DROP 7.0 30%(w/v) polyethylene glycol 6000, 0.1M HEPES, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 294K 294 entity_src_gen citation_author chem_comp entity pdbx_chem_comp_identifier pdbx_entity_nonpoly struct_conn struct_ref_seq_dif struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Carbohydrate remediation repository Remediation Database references Data collection Source and taxonomy Data collection Database references Data collection Database references Derived calculations Structure summary Data collection Database references Refinement description Structure summary 1 0 2015-03-11 1 1 2016-01-27 1 2 2018-06-13 1 3 2018-06-20 1 4 2020-07-29 1 5 2023-11-08 _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_strain _citation_author.name _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_entity_nonpoly.name _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_ref_seq_dif.details _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc RCSB Y PDBJ 2014-06-06 REL REL NAG 2-acetamido-2-deoxy-beta-D-glucopyranose HOH water 3HUP PDB experimental model NAG 511 2 NAG NAG 301 A NAG 512 2 NAG NAG 302 A NAG 511 2 NAG NAG 301 B NAG 512 2 NAG NAG 302 B HOH 5 3 HOH HOH 401 A HOH 7 3 HOH HOH 402 A HOH 8 3 HOH HOH 403 A HOH 10 3 HOH HOH 404 A HOH 11 3 HOH HOH 405 A HOH 12 3 HOH HOH 406 A HOH 14 3 HOH HOH 407 A HOH 19 3 HOH HOH 408 A HOH 20 3 HOH HOH 409 A HOH 21 3 HOH HOH 410 A HOH 22 3 HOH HOH 411 A HOH 25 3 HOH HOH 412 A HOH 28 3 HOH HOH 413 A HOH 30 3 HOH HOH 414 A HOH 31 3 HOH HOH 415 A HOH 33 3 HOH HOH 416 A HOH 35 3 HOH HOH 417 A HOH 39 3 HOH HOH 418 A HOH 41 3 HOH HOH 419 A HOH 44 3 HOH HOH 420 A HOH 49 3 HOH HOH 421 A HOH 52 3 HOH HOH 422 A HOH 54 3 HOH HOH 423 A HOH 55 3 HOH HOH 424 A HOH 58 3 HOH HOH 425 A HOH 61 3 HOH HOH 426 A HOH 63 3 HOH HOH 427 A HOH 66 3 HOH HOH 428 A HOH 67 3 HOH HOH 429 A HOH 68 3 HOH HOH 430 A HOH 69 3 HOH HOH 431 A HOH 70 3 HOH HOH 432 A HOH 75 3 HOH HOH 433 A HOH 77 3 HOH HOH 434 A HOH 78 3 HOH HOH 435 A HOH 79 3 HOH HOH 436 A HOH 80 3 HOH HOH 437 A HOH 84 3 HOH HOH 438 A HOH 86 3 HOH HOH 439 A HOH 89 3 HOH HOH 440 A HOH 90 3 HOH HOH 441 A HOH 91 3 HOH HOH 442 A HOH 92 3 HOH HOH 443 A HOH 93 3 HOH HOH 444 A HOH 94 3 HOH HOH 445 A HOH 95 3 HOH HOH 446 A HOH 96 3 HOH HOH 447 A HOH 97 3 HOH HOH 448 A HOH 108 3 HOH HOH 449 A HOH 109 3 HOH HOH 450 A HOH 110 3 HOH HOH 451 A HOH 111 3 HOH HOH 452 A HOH 117 3 HOH HOH 453 A HOH 119 3 HOH HOH 454 A HOH 120 3 HOH HOH 455 A HOH 124 3 HOH HOH 456 A HOH 125 3 HOH HOH 457 A HOH 126 3 HOH HOH 458 A HOH 127 3 HOH HOH 459 A HOH 128 3 HOH HOH 460 A HOH 129 3 HOH HOH 461 A HOH 130 3 HOH HOH 462 A HOH 131 3 HOH HOH 463 A HOH 132 3 HOH HOH 464 A HOH 138 3 HOH HOH 465 A HOH 139 3 HOH HOH 466 A HOH 140 3 HOH HOH 467 A HOH 142 3 HOH HOH 468 A HOH 144 3 HOH HOH 469 A HOH 145 3 HOH HOH 470 A HOH 146 3 HOH HOH 471 A HOH 147 3 HOH HOH 472 A HOH 153 3 HOH HOH 473 A HOH 155 3 HOH HOH 474 A HOH 156 3 HOH HOH 475 A HOH 159 3 HOH HOH 476 A HOH 160 3 HOH HOH 477 A HOH 161 3 HOH HOH 478 A HOH 162 3 HOH HOH 479 A HOH 163 3 HOH HOH 480 A HOH 166 3 HOH HOH 481 A HOH 167 3 HOH HOH 482 A HOH 1 3 HOH HOH 401 B HOH 2 3 HOH HOH 402 B HOH 3 3 HOH HOH 403 B HOH 4 3 HOH HOH 404 B HOH 6 3 HOH HOH 405 B HOH 9 3 HOH HOH 406 B HOH 13 3 HOH HOH 407 B HOH 15 3 HOH HOH 408 B HOH 16 3 HOH HOH 409 B HOH 17 3 HOH HOH 410 B HOH 18 3 HOH HOH 411 B HOH 23 3 HOH HOH 412 B HOH 24 3 HOH HOH 413 B HOH 26 3 HOH HOH 414 B HOH 27 3 HOH HOH 415 B HOH 29 3 HOH HOH 416 B HOH 32 3 HOH HOH 417 B HOH 34 3 HOH HOH 418 B HOH 36 3 HOH HOH 419 B HOH 37 3 HOH HOH 420 B HOH 38 3 HOH HOH 421 B HOH 40 3 HOH HOH 422 B HOH 42 3 HOH HOH 423 B HOH 43 3 HOH HOH 424 B HOH 45 3 HOH HOH 425 B HOH 46 3 HOH HOH 426 B HOH 47 3 HOH HOH 427 B HOH 48 3 HOH HOH 428 B HOH 50 3 HOH HOH 429 B HOH 51 3 HOH HOH 430 B HOH 53 3 HOH HOH 431 B HOH 56 3 HOH HOH 432 B HOH 57 3 HOH HOH 433 B HOH 59 3 HOH HOH 434 B HOH 60 3 HOH HOH 435 B HOH 62 3 HOH HOH 436 B HOH 64 3 HOH HOH 437 B HOH 65 3 HOH HOH 438 B HOH 71 3 HOH HOH 439 B HOH 72 3 HOH HOH 440 B HOH 73 3 HOH HOH 441 B HOH 74 3 HOH HOH 442 B HOH 76 3 HOH HOH 443 B HOH 81 3 HOH HOH 444 B HOH 82 3 HOH HOH 445 B HOH 83 3 HOH HOH 446 B HOH 85 3 HOH HOH 447 B HOH 87 3 HOH HOH 448 B HOH 88 3 HOH HOH 449 B HOH 98 3 HOH HOH 450 B HOH 99 3 HOH HOH 451 B HOH 100 3 HOH HOH 452 B HOH 101 3 HOH HOH 453 B HOH 102 3 HOH HOH 454 B HOH 103 3 HOH HOH 455 B HOH 104 3 HOH HOH 456 B HOH 105 3 HOH HOH 457 B HOH 106 3 HOH HOH 458 B HOH 107 3 HOH HOH 459 B HOH 112 3 HOH HOH 460 B HOH 113 3 HOH HOH 461 B HOH 114 3 HOH HOH 462 B HOH 115 3 HOH HOH 463 B HOH 116 3 HOH HOH 464 B HOH 118 3 HOH HOH 465 B HOH 121 3 HOH HOH 466 B HOH 122 3 HOH HOH 467 B HOH 123 3 HOH HOH 468 B HOH 133 3 HOH HOH 469 B HOH 134 3 HOH HOH 470 B HOH 135 3 HOH HOH 471 B HOH 136 3 HOH HOH 472 B HOH 137 3 HOH HOH 473 B HOH 141 3 HOH HOH 474 B HOH 143 3 HOH HOH 475 B HOH 148 3 HOH HOH 476 B HOH 149 3 HOH HOH 477 B HOH 150 3 HOH HOH 478 B HOH 151 3 HOH HOH 479 B HOH 152 3 HOH HOH 480 B HOH 154 3 HOH HOH 481 B HOH 157 3 HOH HOH 482 B HOH 158 3 HOH HOH 483 B HOH 164 3 HOH HOH 484 B HOH 165 3 HOH HOH 485 B n 1 69 A n 2 70 A n 3 71 A n 4 72 A ALA 73 n 5 ALA 73 A ALA 74 n 6 ALA 74 A CYS 75 n 7 CYS 75 A PRO 76 n 8 PRO 76 A GLU 77 n 9 GLU 77 A SER 78 n 10 SER 78 A TRP 79 n 11 TRP 79 A ILE 80 n 12 ILE 80 A GLY 81 n 13 GLY 81 A PHE 82 n 14 PHE 82 A GLN 83 n 15 GLN 83 A ARG 84 n 16 ARG 84 A LYS 85 n 17 LYS 85 A CYS 86 n 18 CYS 86 A PHE 87 n 19 PHE 87 A TYR 88 n 20 TYR 88 A PHE 89 n 21 PHE 89 A SER 90 n 22 SER 90 A ASP 91 n 23 ASP 91 A ASP 92 n 24 ASP 92 A THR 93 n 25 THR 93 A LYS 94 n 26 LYS 94 A ASN 95 n 27 ASN 95 A TRP 96 n 28 TRP 96 A THR 97 n 29 THR 97 A SER 98 n 30 SER 98 A SER 99 n 31 SER 99 A GLN 100 n 32 GLN 100 A ARG 101 n 33 ARG 101 A PHE 102 n 34 PHE 102 A CYS 103 n 35 CYS 103 A ASP 104 n 36 ASP 104 A SER 105 n 37 SER 105 A GLN 106 n 38 GLN 106 A ASP 107 n 39 ASP 107 A ALA 108 n 40 ALA 108 A ASP 109 n 41 ASP 109 A LEU 110 n 42 LEU 110 A ALA 111 n 43 ALA 111 A GLN 112 n 44 GLN 112 A VAL 113 n 45 VAL 113 A GLU 114 n 46 GLU 114 A SER 115 n 47 SER 115 A PHE 116 n 48 PHE 116 A GLN 117 n 49 GLN 117 A GLU 118 n 50 GLU 118 A LEU 119 n 51 LEU 119 A ASN 120 n 52 ASN 120 A PHE 121 n 53 PHE 121 A LEU 122 n 54 LEU 122 A LEU 123 n 55 LEU 123 A ARG 124 n 56 ARG 124 A TYR 125 n 57 TYR 125 A LYS 126 n 58 LYS 126 A GLY 127 n 59 GLY 127 A PRO 128 n 60 PRO 128 A SER 129 n 61 SER 129 A ASP 130 n 62 ASP 130 A HIS 131 n 63 HIS 131 A TRP 132 n 64 TRP 132 A ILE 133 n 65 ILE 133 A GLY 134 n 66 GLY 134 A LEU 135 n 67 LEU 135 A SER 136 n 68 SER 136 A ARG 137 n 69 ARG 137 A GLU 138 n 70 GLU 138 A GLN 139 n 71 GLN 139 A GLY 140 n 72 GLY 140 A GLN 141 n 73 GLN 141 A PRO 142 n 74 PRO 142 A TRP 143 n 75 TRP 143 A LYS 144 n 76 LYS 144 A TRP 145 n 77 TRP 145 A ILE 146 n 78 ILE 146 A ASN 147 n 79 ASN 147 A GLY 148 n 80 GLY 148 A THR 149 n 81 THR 149 A GLU 150 n 82 GLU 150 A TRP 151 n 83 TRP 151 A THR 152 n 84 THR 152 A ARG 153 n 85 ARG 153 A GLN 154 n 86 GLN 154 A PHE 155 n 87 PHE 155 A PRO 156 n 88 PRO 156 A ILE 157 n 89 ILE 157 A LEU 158 n 90 LEU 158 A GLY 159 n 91 GLY 159 A ALA 160 n 92 ALA 160 A GLY 161 n 93 GLY 161 A GLU 162 n 94 GLU 162 A CYS 163 n 95 CYS 163 A ALA 164 n 96 ALA 164 A TYR 165 n 97 TYR 165 A LEU 166 n 98 LEU 166 A ASN 167 n 99 ASN 167 A ASP 168 n 100 ASP 168 A LYS 169 n 101 LYS 169 A GLY 170 n 102 GLY 170 A ALA 171 n 103 ALA 171 A SER 172 n 104 SER 172 A SER 173 n 105 SER 173 A ALA 174 n 106 ALA 174 A ARG 175 n 107 ARG 175 A CYS 176 n 108 CYS 176 A TYR 177 n 109 TYR 177 A THR 178 n 110 THR 178 A GLU 179 n 111 GLU 179 A ARG 180 n 112 ARG 180 A LYS 181 n 113 LYS 181 A TRP 182 n 114 TRP 182 A ILE 183 n 115 ILE 183 A CYS 184 n 116 CYS 184 A SER 185 n 117 SER 185 A LYS 186 n 118 LYS 186 A SER 187 n 119 SER 187 A ASP 188 n 120 ASP 188 A ILE 189 n 121 ILE 189 A HIS 190 n 122 HIS 190 A VAL 191 n 123 VAL 191 A GLY 192 n 124 GLY 192 A THR 193 n 125 THR 193 A LYS 194 n 126 LYS 194 A n 127 195 A n 128 196 A n 129 197 A n 130 198 A n 131 199 A n 132 200 A n 133 201 A n 134 202 A n 135 203 A n 1 69 B n 2 70 B n 3 71 B n 4 72 B ALA 73 n 5 ALA 73 B ALA 74 n 6 ALA 74 B CYS 75 n 7 CYS 75 B PRO 76 n 8 PRO 76 B GLU 77 n 9 GLU 77 B SER 78 n 10 SER 78 B TRP 79 n 11 TRP 79 B ILE 80 n 12 ILE 80 B GLY 81 n 13 GLY 81 B PHE 82 n 14 PHE 82 B GLN 83 n 15 GLN 83 B ARG 84 n 16 ARG 84 B LYS 85 n 17 LYS 85 B CYS 86 n 18 CYS 86 B PHE 87 n 19 PHE 87 B TYR 88 n 20 TYR 88 B PHE 89 n 21 PHE 89 B SER 90 n 22 SER 90 B ASP 91 n 23 ASP 91 B ASP 92 n 24 ASP 92 B THR 93 n 25 THR 93 B LYS 94 n 26 LYS 94 B ASN 95 n 27 ASN 95 B TRP 96 n 28 TRP 96 B THR 97 n 29 THR 97 B SER 98 n 30 SER 98 B SER 99 n 31 SER 99 B GLN 100 n 32 GLN 100 B ARG 101 n 33 ARG 101 B PHE 102 n 34 PHE 102 B CYS 103 n 35 CYS 103 B ASP 104 n 36 ASP 104 B SER 105 n 37 SER 105 B GLN 106 n 38 GLN 106 B ASP 107 n 39 ASP 107 B ALA 108 n 40 ALA 108 B ASP 109 n 41 ASP 109 B LEU 110 n 42 LEU 110 B ALA 111 n 43 ALA 111 B GLN 112 n 44 GLN 112 B VAL 113 n 45 VAL 113 B GLU 114 n 46 GLU 114 B SER 115 n 47 SER 115 B PHE 116 n 48 PHE 116 B GLN 117 n 49 GLN 117 B GLU 118 n 50 GLU 118 B LEU 119 n 51 LEU 119 B ASN 120 n 52 ASN 120 B PHE 121 n 53 PHE 121 B LEU 122 n 54 LEU 122 B LEU 123 n 55 LEU 123 B ARG 124 n 56 ARG 124 B TYR 125 n 57 TYR 125 B LYS 126 n 58 LYS 126 B GLY 127 n 59 GLY 127 B PRO 128 n 60 PRO 128 B SER 129 n 61 SER 129 B ASP 130 n 62 ASP 130 B HIS 131 n 63 HIS 131 B TRP 132 n 64 TRP 132 B ILE 133 n 65 ILE 133 B GLY 134 n 66 GLY 134 B LEU 135 n 67 LEU 135 B SER 136 n 68 SER 136 B ARG 137 n 69 ARG 137 B GLU 138 n 70 GLU 138 B GLN 139 n 71 GLN 139 B GLY 140 n 72 GLY 140 B GLN 141 n 73 GLN 141 B PRO 142 n 74 PRO 142 B TRP 143 n 75 TRP 143 B LYS 144 n 76 LYS 144 B TRP 145 n 77 TRP 145 B ILE 146 n 78 ILE 146 B ASN 147 n 79 ASN 147 B GLY 148 n 80 GLY 148 B THR 149 n 81 THR 149 B GLU 150 n 82 GLU 150 B TRP 151 n 83 TRP 151 B THR 152 n 84 THR 152 B ARG 153 n 85 ARG 153 B GLN 154 n 86 GLN 154 B PHE 155 n 87 PHE 155 B PRO 156 n 88 PRO 156 B ILE 157 n 89 ILE 157 B LEU 158 n 90 LEU 158 B GLY 159 n 91 GLY 159 B ALA 160 n 92 ALA 160 B GLY 161 n 93 GLY 161 B GLU 162 n 94 GLU 162 B CYS 163 n 95 CYS 163 B ALA 164 n 96 ALA 164 B TYR 165 n 97 TYR 165 B LEU 166 n 98 LEU 166 B ASN 167 n 99 ASN 167 B ASP 168 n 100 ASP 168 B LYS 169 n 101 LYS 169 B GLY 170 n 102 GLY 170 B ALA 171 n 103 ALA 171 B SER 172 n 104 SER 172 B SER 173 n 105 SER 173 B ALA 174 n 106 ALA 174 B ARG 175 n 107 ARG 175 B CYS 176 n 108 CYS 176 B TYR 177 n 109 TYR 177 B THR 178 n 110 THR 178 B GLU 179 n 111 GLU 179 B ARG 180 n 112 ARG 180 B LYS 181 n 113 LYS 181 B TRP 182 n 114 TRP 182 B ILE 183 n 115 ILE 183 B CYS 184 n 116 CYS 184 B SER 185 n 117 SER 185 B LYS 186 n 118 LYS 186 B SER 187 n 119 SER 187 B ASP 188 n 120 ASP 188 B ILE 189 n 121 ILE 189 B HIS 190 n 122 HIS 190 B VAL 191 n 123 VAL 191 B GLY 192 n 124 GLY 192 B n 125 193 B n 126 194 B n 127 195 B n 128 196 B n 129 197 B n 130 198 B n 131 199 B n 132 200 B n 133 201 B n 134 202 B n 135 203 B author_defined_assembly 2 dimeric software_defined_assembly PISA 1 monomeric software_defined_assembly PISA 1 monomeric A ASN 147 GLYCOSYLATION SITE A ASN 79 ASN A ASN 95 GLYCOSYLATION SITE A ASN 27 ASN B ASN 147 GLYCOSYLATION SITE B ASN 79 ASN B ASN 95 GLYCOSYLATION SITE B ASN 27 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 80 A N ILE 12 A O PHE 87 A O PHE 19 A N CYS 86 A N CYS 18 A O LYS 186 A O LYS 118 A O SER 185 A O SER 117 A N ASP 109 A N ASP 41 A N ILE 80 A N ILE 12 A O PHE 87 A O PHE 19 A N CYS 86 A N CYS 18 A O LYS 186 A O LYS 118 A O LYS 181 A O LYS 113 A N TRP 132 A N TRP 64 A N HIS 131 A N HIS 63 A O LEU 166 A O LEU 98 A N TYR 165 A N TYR 97 A O SER 172 A O SER 104 B N ILE 80 B N ILE 12 B O PHE 87 B O PHE 19 B N CYS 86 B N CYS 18 B O LYS 186 B O LYS 118 B O LYS 181 B O LYS 113 B N TRP 132 B N TRP 64 B N SER 136 B N SER 68 B O LYS 144 B O LYS 76 B N ASP 109 B N ASP 41 B O SER 185 B O SER 117 B O LYS 181 B O LYS 113 B N TRP 132 B N TRP 64 B N HIS 131 B N HIS 63 B O LEU 166 B O LEU 98 B N TYR 165 B N TYR 97 B O SER 172 B O SER 104 1 A ILE 69 A ILE 1 1 Y 1 A THR 70 A THR 2 1 Y 1 A GLY 71 A GLY 3 1 Y 1 A GLN 72 A GLN 4 1 Y 1 A HIS 195 A HIS 127 1 Y 1 A HIS 196 A HIS 128 1 Y 1 A HIS 197 A HIS 129 1 Y 1 A HIS 198 A HIS 130 1 Y 1 A HIS 199 A HIS 131 1 Y 1 A HIS 200 A HIS 132 1 Y 1 A HIS 201 A HIS 133 1 Y 1 A HIS 202 A HIS 134 1 Y 1 A GLY 203 A GLY 135 1 Y 1 B ILE 69 B ILE 1 1 Y 1 B THR 70 B THR 2 1 Y 1 B GLY 71 B GLY 3 1 Y 1 B GLN 72 B GLN 4 1 Y 1 B THR 193 B THR 125 1 Y 1 B LYS 194 B LYS 126 1 Y 1 B HIS 195 B HIS 127 1 Y 1 B HIS 196 B HIS 128 1 Y 1 B HIS 197 B HIS 129 1 Y 1 B HIS 198 B HIS 130 1 Y 1 B HIS 199 B HIS 131 1 Y 1 B HIS 200 B HIS 132 1 Y 1 B HIS 201 B HIS 133 1 Y 1 B HIS 202 B HIS 134 1 Y 1 B GLY 203 B GLY 135 1 Y 1 -3.13 0.50 120.30 117.17 A A A NE CZ NH2 ARG ARG ARG 137 137 137 N 1 A B NZ O LYS HOH 169 465 2.15 1_555 2_444 1 A GLN 83 35.73 73.32 1 A ASN 167 -109.65 -159.48 1 B SER 78 83.70 3.93 21.046 -0.33 0.00 0.00 1.04 -0.00 -0.71 0.954 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS, OTHER REFINEMENT REMARKS: SF FILE CONTAINS FRIEDEL PAIRS UNDER I/F_MINUS AND I/F_PLUS COLUMNS. 0.24377 0.17769 0.17936 0.17936 1.80 43.73 971 18956 18956 95.96 2.461 0.076 random 1 throughout (except for the last cycle) 0 MOLECULAR REPLACEMENT 0.154 0.80 0.80 1.20 3HUP CCP4 STEREOCHEMISTRY LIBRARY, VERSION 6.4.0 MASK 1.80 43.73 167 2197 56 0 1974 0.017 0.020 2137 0.003 0.020 1864 1.794 1.933 2906 0.928 3.000 4286 7.638 5.000 252 34.402 23.694 111 15.605 15.000 339 15.372 15.000 15 0.108 0.200 288 0.009 0.020 2437 0.001 0.020 550 2.076 1.895 979 2.055 1.891 978 3.114 2.825 1223 3.115 2.828 1224 2.448 2.161 1158 2.447 2.163 1159 3.833 3.142 1678 5.794 16.131 2550 5.663 15.919 2502 0.299 0.225 1.847 64 1317 1253 20 91.59 17.7 1.8 43.73 4QKI 18996 18996 0 -3.7 0.082 1 11.8 6.0 96.7 0.404 1.80 1.84 3.7 1050 1 6.2 91.6 phasing BALBES refinement REFMAC 5.8.0071 data reduction MOSFLM data scaling Aimless Dimeric form of human LLT1, a ligand for NKR-P1 1 N N 1 N N 2 N N 2 N N 2 N N 2 N N 3 N N 3 N N A ASN 95 A ASN 27 HELX_P A SER 105 A SER 37 1 1 11 A SER 115 A SER 47 HELX_P A GLY 127 A GLY 59 1 2 13 B ASN 95 B ASN 27 HELX_P B GLN 106 B GLN 38 1 3 12 B SER 115 B SER 47 HELX_P B GLY 127 B GLY 59 1 4 13 disulf 2.078 A CYS 75 A SG CYS 7 1_555 A CYS 86 A SG CYS 18 1_555 disulf 2.069 A CYS 103 A SG CYS 35 1_555 A CYS 184 A SG CYS 116 1_555 disulf 1.944 A CYS 163 A SG CYS 95 1_555 A CYS 176 A SG CYS 108 1_555 disulf 2.080 B CYS 75 B SG CYS 7 1_555 B CYS 86 B SG CYS 18 1_555 disulf 2.045 B CYS 103 B SG CYS 35 1_555 B CYS 184 B SG CYS 116 1_555 disulf 2.084 B CYS 163 B SG CYS 95 1_555 B CYS 176 B SG CYS 108 1_555 covale 1.427 one N-Glycosylation A ASN 95 A ND2 ASN 27 1_555 A NAG 301 C C1 NAG 1_555 covale 1.406 one N-Glycosylation A ASN 147 A ND2 ASN 79 1_555 A NAG 302 D C1 NAG 1_555 covale 1.465 one N-Glycosylation B ASN 95 B ND2 ASN 27 1_555 B NAG 301 E C1 NAG 1_555 covale 1.436 one N-Glycosylation B ASN 147 B ND2 ASN 79 1_555 B NAG 302 F C1 NAG 1_555 IMMUNE SYSTEM C-type lectin like fold, ligand for human receptor NKR-P1, glycosylation; deglycosylated after the first GlcNac unit, anchored in membrane on cell surface, IMMUNE SYSTEM CLC2D_HUMAN UNP 1 72 Q9UHP7 QAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKWINGTEW TRQFPILGAGECAYLNDKGASSARHYTERKWICSKSDIHV 72 191 4QKI 72 191 Q9UHP7 A 1 4 123 72 191 4QKI 72 191 Q9UHP7 B 1 4 123 1 expression tag ILE 69 4QKI A Q9UHP7 UNP 1 1 expression tag THR 70 4QKI A Q9UHP7 UNP 2 1 expression tag GLY 71 4QKI A Q9UHP7 UNP 3 1 HIS engineered mutation CYS 176 4QKI A Q9UHP7 UNP 176 108 1 expression tag GLY 192 4QKI A Q9UHP7 UNP 124 1 expression tag THR 193 4QKI A Q9UHP7 UNP 125 1 expression tag LYS 194 4QKI A Q9UHP7 UNP 126 1 expression tag HIS 195 4QKI A Q9UHP7 UNP 127 1 expression tag HIS 196 4QKI A Q9UHP7 UNP 128 1 expression tag HIS 197 4QKI A Q9UHP7 UNP 129 1 expression tag HIS 198 4QKI A Q9UHP7 UNP 130 1 expression tag HIS 199 4QKI A Q9UHP7 UNP 131 1 expression tag HIS 200 4QKI A Q9UHP7 UNP 132 1 expression tag HIS 201 4QKI A Q9UHP7 UNP 133 1 expression tag HIS 202 4QKI A Q9UHP7 UNP 134 1 expression tag GLY 203 4QKI A Q9UHP7 UNP 135 2 expression tag ILE 69 4QKI B Q9UHP7 UNP 1 2 expression tag THR 70 4QKI B Q9UHP7 UNP 2 2 expression tag GLY 71 4QKI B Q9UHP7 UNP 3 2 HIS engineered mutation CYS 176 4QKI B Q9UHP7 UNP 176 108 2 expression tag GLY 192 4QKI B Q9UHP7 UNP 124 2 expression tag THR 193 4QKI B Q9UHP7 UNP 125 2 expression tag LYS 194 4QKI B Q9UHP7 UNP 126 2 expression tag HIS 195 4QKI B Q9UHP7 UNP 127 2 expression tag HIS 196 4QKI B Q9UHP7 UNP 128 2 expression tag HIS 197 4QKI B Q9UHP7 UNP 129 2 expression tag HIS 198 4QKI B Q9UHP7 UNP 130 2 expression tag HIS 199 4QKI B Q9UHP7 UNP 131 2 expression tag HIS 200 4QKI B Q9UHP7 UNP 132 2 expression tag HIS 201 4QKI B Q9UHP7 UNP 133 2 expression tag HIS 202 4QKI B Q9UHP7 UNP 134 2 expression tag GLY 203 4QKI B Q9UHP7 UNP 135 4 6 5 5 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A ILE 80 A ILE 12 A PHE 82 A PHE 14 A LYS 85 A LYS 17 A PHE 89 A PHE 21 A LYS 181 A LYS 113 A SER 187 A SER 119 A ASP 109 A ASP 41 A LEU 110 A LEU 42 A ILE 80 A ILE 12 A PHE 82 A PHE 14 A LYS 85 A LYS 17 A PHE 89 A PHE 21 A LYS 181 A LYS 113 A SER 187 A SER 119 A HIS 131 A HIS 63 A SER 136 A SER 68 A CYS 163 A CYS 95 A LEU 166 A LEU 98 A ALA 171 A ALA 103 A ALA 174 A ALA 106 B ILE 80 B ILE 12 B PHE 82 B PHE 14 B LYS 85 B LYS 17 B PHE 89 B PHE 21 B LYS 181 B LYS 113 B SER 187 B SER 119 B HIS 131 B HIS 63 B SER 136 B SER 68 B LYS 144 B LYS 76 B TRP 145 B TRP 77 B ASP 109 B ASP 41 B LEU 110 B LEU 42 B LYS 181 B LYS 113 B SER 187 B SER 119 B HIS 131 B HIS 63 B SER 136 B SER 68 B CYS 163 B CYS 95 B LEU 166 B LEU 98 B ALA 171 B ALA 103 B ALA 174 B ALA 106 19 P 21 21 21