0.026252
0.000000
0.000000
0.000000
0.018676
0.000000
0.000000
0.000000
0.018519
0.00000
0.00000
0.00000
Feldkamp, M.D.
Waterson, A.G.
Kennedy, J.P.
Patrone, J.D.
Pelz, N.F.
Frank, A.O.
Vangamudi, B.
Sousa-Fagundes, E.M.
Rossanese, O.W.
Fesik, S.W.
Chazin, W.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
38.092
53.545
53.998
C31 H21 Cl2 N3 O5 S
618.487
5-(4-{[6-(5-carboxyfuran-2-yl)-1-thioxo-3,4-dihydroisoquinolin-2(1H)-yl]methyl}phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
C
Y
2
N
C
N
3
N
C
N
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
C
Y
8
N
C
Y
9
N
C
N
10
N
S
N
11
N
C
Y
12
N
C
Y
13
N
C
Y
14
N
C
Y
15
N
C
Y
16
N
C
Y
17
N
C
Y
18
N
C
N
19
N
C
N
20
N
O
N
21
N
O
Y
22
N
O
Y
23
N
C
N
24
N
C
N
25
N
N
Y
26
N
C
Y
27
N
C
Y
28
N
C
Y
29
N
C
N
30
N
C
N
31
N
O
N
32
N
O
Y
33
N
N
Y
34
N
N
Y
35
N
C
Y
36
N
C
Y
37
N
C
Y
38
N
C
N
39
N
CL
Y
40
N
C
N
41
N
CL
Y
42
N
C
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
N
N
65
S
C
N
66
N
C
N
67
N
O
N
68
N
C
N
69
N
O
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
N
N
78
S
C
N
79
N
C
N
80
N
O
N
81
N
C
N
82
N
C
N
83
N
C
N
84
N
N
N
85
N
C
N
86
N
N
N
87
N
N
N
88
N
O
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
N
N
105
S
C
N
106
N
C
N
107
N
O
N
108
N
C
N
109
N
C
N
110
N
O
N
111
N
N
N
112
N
O
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
N
N
122
S
C
N
123
N
C
N
124
N
O
N
125
N
C
N
126
N
C
N
127
N
O
N
128
N
O
N
129
N
O
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
R
C
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
S
N
143
N
O
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
S
C
N
153
N
C
N
154
N
O
N
155
N
C
N
156
N
C
N
157
N
C
N
158
N
O
N
159
N
N
N
160
N
O
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
N
C
N
176
N
C
N
177
N
C
N
178
N
O
N
179
N
O
N
180
N
O
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
N
N
191
N
C
N
192
N
C
N
193
N
O
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
N
N
201
S
C
N
202
N
C
N
203
N
O
N
204
N
C
Y
205
N
C
Y
206
N
N
Y
207
N
C
Y
208
N
C
Y
209
N
N
N
210
N
O
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
N
N
225
S
C
N
226
N
C
N
227
N
O
N
228
S
C
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
O
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
N
N
247
S
C
N
248
N
C
N
249
N
O
N
250
N
C
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
O
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
N
N
269
S
C
N
270
N
C
N
271
N
O
N
272
N
C
N
273
N
C
N
274
N
C
N
275
N
C
N
276
N
N
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
N
N
294
S
C
N
295
N
C
N
296
N
O
N
297
N
C
N
298
N
C
N
299
N
S
N
300
N
C
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
N
N
314
S
C
N
315
N
C
N
316
N
O
N
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
Y
321
N
C
Y
322
N
C
Y
323
N
C
N
324
N
O
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
N
C
N
341
N
C
N
342
N
C
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
N
C
N
358
N
O
N
359
N
O
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
N
N
368
S
C
N
369
N
C
N
370
N
O
N
371
R
C
N
372
N
O
N
373
N
C
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
N
395
N
O
N
396
N
O
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
N
N
409
S
C
N
410
N
C
N
411
N
O
N
412
N
C
N
413
N
C
N
414
N
C
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
Y
4
N
doub
Y
5
N
sing
Y
6
N
sing
Y
7
N
sing
N
8
N
sing
Y
9
N
doub
N
10
N
sing
Y
11
N
doub
Y
12
N
sing
Y
13
N
doub
Y
14
N
sing
Y
15
N
sing
Y
16
N
sing
N
17
N
sing
Y
18
N
doub
Y
19
N
doub
N
20
N
doub
N
21
N
sing
Y
22
N
doub
Y
23
N
sing
N
24
N
sing
Y
25
N
doub
Y
26
N
sing
Y
27
N
doub
N
28
N
sing
Y
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
Y
33
N
sing
Y
34
N
sing
Y
35
N
doub
Y
36
N
sing
Y
37
N
doub
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
Y
42
N
sing
Y
43
N
doub
N
44
N
sing
N
45
N
sing
Y
46
N
doub
Y
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
doub
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
Y
208
N
sing
Y
209
N
doub
Y
210
N
doub
N
211
N
sing
Y
212
N
sing
N
213
N
sing
Y
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
Y
316
N
doub
Y
317
N
sing
Y
318
N
sing
N
319
N
sing
Y
320
N
doub
N
321
N
sing
Y
322
N
doub
N
323
N
sing
Y
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
Y
385
N
doub
Y
386
N
sing
Y
387
N
sing
N
388
N
sing
Y
389
N
doub
N
390
N
sing
Y
391
N
doub
N
392
N
sing
Y
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
US
ACS Med Chem Lett
1948-5875
6
140
145
10.1021/ml5003629
25699140
Diphenylpyrazoles as replication protein a inhibitors.
2015
10.2210/pdb4r4i/pdb
pdb_00004r4i
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
2013-01-17
MAR scanner 300 mm plate
SI(111)
SINGLE WAVELENGTH
M
x-ray
1
0.97872
1.0
21-ID-D
APS
0.97872
SYNCHROTRON
APS BEAMLINE 21-ID-D
13497.728
Replication protein A 70 kDa DNA-binding subunit
N-terminal domain (UNP residues 1-120)
E7R
1
man
polymer
618.487
5-(4-{[6-(5-carboxyfuran-2-yl)-1-thioxo-3,4-dihydroisoquinolin-2(1H)-yl]methyl}phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid
1
syn
non-polymer
18.015
water
101
nat
water
RP-A p70, Replication factor A protein 1, RF-A protein 1, Single-stranded DNA-binding protein, Replication protein A 70 kDa DNA-binding subunit, N-terminally processed
no
no
GSHMVGQLSRGAIAAIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQLSSNCVC
QIHRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNE
GSHMVGQLSRGAIAAIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQLSSNCVC
QIHRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
RPA1, REPA1, RPA70
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3)
plasmid
pET15b
1
2.04
39.70
VAPOR DIFFUSION, SITTING DROP
6.5
100 MM MES, 200 MM CALCIUM ACETATE, 20% PEG 8000, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 294K
294
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2014-11-19
1
1
2015-03-11
1
2
2023-09-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2014-08-19
REL
REL
3HV
5-(4-{[6-(5-carboxyfuran-2-yl)-1-thioxo-3,4-dihydroisoquinolin-2(1H)-yl]methyl}phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid
HOH
water
4IPC
PDB entry 4IPC
PDB
experimental model
LIG
1
2
3HV
3HV
201
A
HOH
1
3
HOH
HOH
301
A
HOH
3
3
HOH
HOH
302
A
HOH
4
3
HOH
HOH
303
A
HOH
5
3
HOH
HOH
304
A
HOH
6
3
HOH
HOH
305
A
HOH
7
3
HOH
HOH
306
A
HOH
8
3
HOH
HOH
307
A
HOH
9
3
HOH
HOH
308
A
HOH
11
3
HOH
HOH
309
A
HOH
12
3
HOH
HOH
310
A
HOH
13
3
HOH
HOH
311
A
HOH
14
3
HOH
HOH
312
A
HOH
15
3
HOH
HOH
313
A
HOH
16
3
HOH
HOH
314
A
HOH
17
3
HOH
HOH
315
A
HOH
18
3
HOH
HOH
316
A
HOH
19
3
HOH
HOH
317
A
HOH
20
3
HOH
HOH
318
A
HOH
21
3
HOH
HOH
319
A
HOH
22
3
HOH
HOH
320
A
HOH
23
3
HOH
HOH
321
A
HOH
25
3
HOH
HOH
322
A
HOH
26
3
HOH
HOH
323
A
HOH
27
3
HOH
HOH
324
A
HOH
28
3
HOH
HOH
325
A
HOH
29
3
HOH
HOH
326
A
HOH
30
3
HOH
HOH
327
A
HOH
31
3
HOH
HOH
328
A
HOH
32
3
HOH
HOH
329
A
HOH
33
3
HOH
HOH
330
A
HOH
34
3
HOH
HOH
331
A
HOH
35
3
HOH
HOH
332
A
HOH
36
3
HOH
HOH
333
A
HOH
37
3
HOH
HOH
334
A
HOH
39
3
HOH
HOH
335
A
HOH
40
3
HOH
HOH
336
A
HOH
41
3
HOH
HOH
337
A
HOH
42
3
HOH
HOH
338
A
HOH
43
3
HOH
HOH
339
A
HOH
44
3
HOH
HOH
340
A
HOH
45
3
HOH
HOH
341
A
HOH
46
3
HOH
HOH
342
A
HOH
47
3
HOH
HOH
343
A
HOH
48
3
HOH
HOH
344
A
HOH
49
3
HOH
HOH
345
A
HOH
50
3
HOH
HOH
346
A
HOH
51
3
HOH
HOH
347
A
HOH
52
3
HOH
HOH
348
A
HOH
53
3
HOH
HOH
349
A
HOH
54
3
HOH
HOH
350
A
HOH
55
3
HOH
HOH
351
A
HOH
56
3
HOH
HOH
352
A
HOH
57
3
HOH
HOH
353
A
HOH
59
3
HOH
HOH
354
A
HOH
60
3
HOH
HOH
355
A
HOH
61
3
HOH
HOH
356
A
HOH
62
3
HOH
HOH
357
A
HOH
63
3
HOH
HOH
358
A
HOH
64
3
HOH
HOH
359
A
HOH
65
3
HOH
HOH
360
A
HOH
66
3
HOH
HOH
361
A
HOH
67
3
HOH
HOH
362
A
HOH
68
3
HOH
HOH
363
A
HOH
69
3
HOH
HOH
364
A
HOH
70
3
HOH
HOH
365
A
HOH
71
3
HOH
HOH
366
A
HOH
72
3
HOH
HOH
367
A
HOH
73
3
HOH
HOH
368
A
HOH
74
3
HOH
HOH
369
A
HOH
75
3
HOH
HOH
370
A
HOH
76
3
HOH
HOH
371
A
HOH
77
3
HOH
HOH
372
A
HOH
79
3
HOH
HOH
373
A
HOH
80
3
HOH
HOH
374
A
HOH
81
3
HOH
HOH
375
A
HOH
82
3
HOH
HOH
376
A
HOH
83
3
HOH
HOH
377
A
HOH
84
3
HOH
HOH
378
A
HOH
85
3
HOH
HOH
379
A
HOH
86
3
HOH
HOH
380
A
HOH
87
3
HOH
HOH
381
A
HOH
88
3
HOH
HOH
382
A
HOH
89
3
HOH
HOH
383
A
HOH
90
3
HOH
HOH
384
A
HOH
91
3
HOH
HOH
385
A
HOH
92
3
HOH
HOH
386
A
HOH
93
3
HOH
HOH
387
A
HOH
94
3
HOH
HOH
388
A
HOH
95
3
HOH
HOH
389
A
HOH
96
3
HOH
HOH
390
A
HOH
97
3
HOH
HOH
391
A
HOH
98
3
HOH
HOH
392
A
HOH
99
3
HOH
HOH
393
A
HOH
100
3
HOH
HOH
394
A
HOH
101
3
HOH
HOH
395
A
HOH
102
3
HOH
HOH
396
A
HOH
103
3
HOH
HOH
397
A
HOH
104
3
HOH
HOH
398
A
HOH
105
3
HOH
HOH
399
A
HOH
106
3
HOH
HOH
400
A
HOH
107
3
HOH
HOH
401
A
GLY
-2
n
1
GLY
-2
A
SER
-1
n
2
SER
-1
A
HIS
0
n
3
HIS
0
A
MET
1
n
4
MET
1
A
VAL
2
n
5
VAL
2
A
GLY
3
n
6
GLY
3
A
GLN
4
n
7
GLN
4
A
LEU
5
n
8
LEU
5
A
SER
6
n
9
SER
6
A
ARG
7
n
10
ARG
7
A
GLY
8
n
11
GLY
8
A
ALA
9
n
12
ALA
9
A
ILE
10
n
13
ILE
10
A
ALA
11
n
14
ALA
11
A
ALA
12
n
15
ALA
12
A
ILE
13
n
16
ILE
13
A
MET
14
n
17
MET
14
A
GLN
15
n
18
GLN
15
A
LYS
16
n
19
LYS
16
A
GLY
17
n
20
GLY
17
A
ASP
18
n
21
ASP
18
A
THR
19
n
22
THR
19
A
ASN
20
n
23
ASN
20
A
ILE
21
n
24
ILE
21
A
LYS
22
n
25
LYS
22
A
PRO
23
n
26
PRO
23
A
ILE
24
n
27
ILE
24
A
LEU
25
n
28
LEU
25
A
GLN
26
n
29
GLN
26
A
VAL
27
n
30
VAL
27
A
ILE
28
n
31
ILE
28
A
ASN
29
n
32
ASN
29
A
ILE
30
n
33
ILE
30
A
ARG
31
n
34
ARG
31
A
PRO
32
n
35
PRO
32
A
ILE
33
n
36
ILE
33
A
THR
34
n
37
THR
34
A
THR
35
n
38
THR
35
A
GLY
36
n
39
GLY
36
A
ASN
37
n
40
ASN
37
A
SER
38
n
41
SER
38
A
PRO
39
n
42
PRO
39
A
PRO
40
n
43
PRO
40
A
ARG
41
n
44
ARG
41
A
TYR
42
n
45
TYR
42
A
ARG
43
n
46
ARG
43
A
LEU
44
n
47
LEU
44
A
LEU
45
n
48
LEU
45
A
MET
46
n
49
MET
46
A
SER
47
n
50
SER
47
A
ASP
48
n
51
ASP
48
A
GLY
49
n
52
GLY
49
A
LEU
50
n
53
LEU
50
A
ASN
51
n
54
ASN
51
A
THR
52
n
55
THR
52
A
LEU
53
n
56
LEU
53
A
SER
54
n
57
SER
54
A
SER
55
n
58
SER
55
A
PHE
56
n
59
PHE
56
A
MET
57
n
60
MET
57
A
LEU
58
n
61
LEU
58
A
ALA
59
n
62
ALA
59
A
THR
60
n
63
THR
60
A
GLN
61
n
64
GLN
61
A
LEU
62
n
65
LEU
62
A
ASN
63
n
66
ASN
63
A
PRO
64
n
67
PRO
64
A
LEU
65
n
68
LEU
65
A
VAL
66
n
69
VAL
66
A
GLU
67
n
70
GLU
67
A
GLU
68
n
71
GLU
68
A
GLU
69
n
72
GLU
69
A
GLN
70
n
73
GLN
70
A
LEU
71
n
74
LEU
71
A
SER
72
n
75
SER
72
A
SER
73
n
76
SER
73
A
ASN
74
n
77
ASN
74
A
CYS
75
n
78
CYS
75
A
VAL
76
n
79
VAL
76
A
CYS
77
n
80
CYS
77
A
GLN
78
n
81
GLN
78
A
ILE
79
n
82
ILE
79
A
HIS
80
n
83
HIS
80
A
ARG
81
n
84
ARG
81
A
PHE
82
n
85
PHE
82
A
ILE
83
n
86
ILE
83
A
VAL
84
n
87
VAL
84
A
ASN
85
n
88
ASN
85
A
THR
86
n
89
THR
86
A
LEU
87
n
90
LEU
87
A
LYS
88
n
91
LYS
88
A
ASP
89
n
92
ASP
89
A
GLY
90
n
93
GLY
90
A
ARG
91
n
94
ARG
91
A
ARG
92
n
95
ARG
92
A
VAL
93
n
96
VAL
93
A
VAL
94
n
97
VAL
94
A
ILE
95
n
98
ILE
95
A
LEU
96
n
99
LEU
96
A
MET
97
n
100
MET
97
A
GLU
98
n
101
GLU
98
A
LEU
99
n
102
LEU
99
A
GLU
100
n
103
GLU
100
A
VAL
101
n
104
VAL
101
A
LEU
102
n
105
LEU
102
A
LYS
103
n
106
LYS
103
A
SER
104
n
107
SER
104
A
ALA
105
n
108
ALA
105
A
GLU
106
n
109
GLU
106
A
ALA
107
n
110
ALA
107
A
VAL
108
n
111
VAL
108
A
GLY
109
n
112
GLY
109
A
VAL
110
n
113
VAL
110
A
LYS
111
n
114
LYS
111
A
ILE
112
n
115
ILE
112
A
GLY
113
n
116
GLY
113
A
ASN
114
n
117
ASN
114
A
PRO
115
n
118
PRO
115
A
VAL
116
n
119
VAL
116
A
PRO
117
n
120
PRO
117
A
TYR
118
n
121
TYR
118
A
ASN
119
n
122
ASN
119
A
GLU
120
n
123
GLU
120
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
VAL
116
A
O
VAL
119
A
N
THR
52
A
N
THR
55
A
N
MET
57
A
N
MET
60
A
O
LEU
96
A
O
LEU
99
A
O
ILE
95
A
O
ILE
98
A
N
ILE
83
A
N
ILE
86
A
O
CYS
77
A
O
CYS
80
A
N
LEU
25
A
N
LEU
28
A
N
ILE
28
A
N
ILE
31
A
O
LEU
45
A
O
LEU
48
A
N
TYR
42
A
N
TYR
45
A
O
LEU
58
A
O
LEU
61
1
A
CG
ASN
37
A
CG
ASN
40
1
Y
1
A
OD1
ASN
37
A
OD1
ASN
40
1
Y
1
A
ND2
ASN
37
A
ND2
ASN
40
1
Y
1
A
OG
SER
38
A
OG
SER
41
1
Y
1
A
CD
PRO
39
A
CD
PRO
42
0
Y
1
A
CG
GLN
70
A
CG
GLN
73
1
Y
1
A
CD
GLN
70
A
CD
GLN
73
1
Y
1
A
OE1
GLN
70
A
OE1
GLN
73
1
Y
1
A
NE2
GLN
70
A
NE2
GLN
73
1
Y
1
A
NZ
LYS
88
A
NZ
LYS
91
0
Y
1
A
NZ
LYS
103
A
NZ
LYS
106
0
Y
1
A
A
O
O
HOH
HOH
363
390
1.94
1
A
A
O
O
HOH
HOH
319
378
2.03
1
A
A
O
O
HOH
HOH
395
396
2.09
1
A
A
O
O
HOH
HOH
318
368
2.09
1
A
A
O
O
HOH
HOH
363
391
2.09
1
A
A
O12
O
3HV
HOH
201
312
2.15
1
A
A
O
O
HOH
HOH
360
381
2.16
1
A
A
O
O
HOH
HOH
343
400
2.15
1_555
4_455
1
A
A
O
O
HOH
HOH
318
319
2.18
1_555
2_554
1
A
GLU
69
B
-140.91
52.98
1
A
GLN
70
B
74.26
-5.72
1
A
LEU
71
-56.10
106.01
1
A
ASN
74
94.82
-14.46
1
A
VAL
108
-107.65
-61.03
0.1907
0.1658
0.1671
1.40
31.127
1145
22341
5.13
99.67
0.11
RANDOM
1
1.36
MOLECULAR REPLACEMENT
18.32
0.90
1.11
PDB entry 4IPC
ML
FLAT BULK SOLVENT MODEL
1.40
31.127
101
1076
42
0
933
0.012
1093
1.556
1507
19.137
453
0.085
175
0.007
195
0.2171
0.2013
1.4629
136
2579
99.00
0.2080
0.1912
1.5401
130
2615
100.00
0.2142
0.1820
1.6365
144
2618
100.00
0.2413
0.1775
1.7629
147
2619
100.00
0.2084
0.1617
1.9403
150
2644
100.00
0.1680
0.1504
2.2210
145
2647
100.00
0.2176
0.1594
2.7979
136
2694
100.00
0.1705
0.1660
31.1342
157
2780
99.00
22.3
1.40
31.13
4R4I
22388
0
0
0.041
1
27.19
5.9
99.67
1.40
1.4629
5.59
2184
0.402
1
5.9
98.21
data collection
HKL-2000
model building
PHENIX
(phenix.refine: 1.9_1692)
refinement
PHENIX
(phenix.refine: 1.9_1692)
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHENIX
1.9_1692
Structure of RPA70N in complex with 5-(4-((6-(5-carboxyfuran-2-yl)-1-thioxo-3,4-dihydroisoquinolin-2(1H)-yl)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid
1
N
N
2
N
N
3
N
N
A
HIS
0
A
HIS
3
HELX_P
A
LEU
5
A
LEU
8
5
1
6
A
GLY
8
A
GLY
11
HELX_P
A
LYS
16
A
LYS
19
1
2
9
A
LEU
62
A
LEU
65
HELX_P
A
GLU
68
A
GLU
71
1
3
7
A
SER
104
A
SER
107
HELX_P
A
GLY
109
A
GLY
112
1
4
6
PROTEIN BINDING
OB-fold, Protein-Protein Interaction, Protein binding
RFA1_HUMAN
UNP
1
1
P27694
MVGQLSEGAIAAIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQLSSNCVCQIH
RFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNE
1
120
4R4I
1
120
P27694
A
1
4
123
1
expression tag
GLY
-2
4R4I
A
P27694
UNP
1
1
expression tag
SER
-1
4R4I
A
P27694
UNP
2
1
expression tag
HIS
0
4R4I
A
P27694
UNP
3
1
GLU
engineered mutation
ARG
7
4R4I
A
P27694
UNP
7
10
7
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
116
A
VAL
119
A
PRO
117
A
PRO
120
A
ASN
51
A
ASN
54
A
LEU
58
A
LEU
61
A
ARG
92
A
ARG
95
A
LYS
103
A
LYS
106
A
VAL
76
A
VAL
79
A
THR
86
A
THR
89
A
ILE
24
A
ILE
27
A
ILE
33
A
ILE
36
A
ARG
41
A
ARG
44
A
SER
47
A
SER
50
A
ASN
51
A
ASN
54
A
LEU
58
A
LEU
61
BINDING SITE FOR RESIDUE 3HV A 201
A
3HV
201
Software
14
A
ARG
31
A
ARG
34
14
1_555
A
THR
34
A
THR
37
14
1_555
A
ARG
41
A
ARG
44
14
1_555
A
ARG
43
A
ARG
46
14
1_555
A
SER
55
A
SER
58
14
1_555
A
MET
57
A
MET
60
14
1_555
A
ALA
59
A
ALA
62
14
1_555
A
THR
60
A
THR
63
14
1_555
A
ASN
85
A
ASN
88
14
1_555
A
LEU
87
A
LEU
90
14
1_555
A
VAL
93
A
VAL
96
14
1_555
A
ILE
95
A
ILE
98
14
1_555
A
HOH
312
C
HOH
14
1_555
A
HOH
367
C
HOH
14
1_555
19
P 21 21 21