0.030675 0.000000 0.010796 0.000000 0.015954 0.000000 0.000000 0.000000 0.029604 0.00000 0.00000 0.00000 Luo, F. Fong, Y.H. Jiang, L.W. Wong, K.B. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 109.39 90.00 32.600 62.680 35.810 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking I -1 126.904 IODIDE ION non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N I N 184 N N N 185 S C N 186 N C N 187 N O N 188 N C N 189 N C N 190 N C N 191 N C N 192 N O N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N N N 207 S C N 208 N C N 209 N O N 210 N C N 211 N C N 212 N C N 213 N C N 214 N N N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N S N 238 N C N 239 N O N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C Y 261 N C N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N N N 275 S C N 276 N C N 277 N O N 278 N C N 279 N C N 280 N C N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 N C N 296 N O N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 R C N 310 N O N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N N N 323 S C N 324 N C N 325 N O N 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N N Y 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N C N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C Y 359 N C N 360 N O N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N C N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing US Plant Cell PLCEEW 2109 1532-298X 26 3693 3708 10.1105/tpc.114.129940 25271241 How vacuolar sorting receptor proteins interact with their cargo proteins: crystal structures of apo and cargo-bound forms of the protease-associated domain from an Arabidopsis vacuolar sorting receptor. 2014 10.2210/pdb4tjv/pdb pdb_00004tjv 93 1 IMAGE PLATE 2011-08-28 RIGAKU RAXIS IV++ SINGLE WAVELENGTH M x-ray 1 1.54 1.0 1.54 ROTATING ANODE RIGAKU FR-E+ SUPERBRIGHT 17831.242 Vacuolar-sorting receptor 1 UNP residues 20-182 1 man polymer 126.904 IODIDE ION 6 syn non-polymer 18.015 water 137 nat water AtVSR1,BP80-like protein b,AtBP80b,Epidermal growth factor receptor-like protein 1,AtELP1,Spot 3 protein no no GSRFVVEKNNLKVTSPDSIKGIYECAIGNFGVPQYGGTLVGTVVYPKSNQKACKSYSDFDISFKSKPGRLPTFVLIDRGD CYFTLKAWIAQQAGAAAILVADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKSALSGGDMVNMKLDWTE SVPHP GSRFVVEKNNLKVTSPDSIKGIYECAIGNFGVPQYGGTLVGTVVYPKSNQKACKSYSDFDISFKSKPGRLPTFVLIDRGD CYFTLKAWIAQQAGAAAILVADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKSALSGGDMVNMKLDWTE SVPHP A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Mouse-ear cress sample 1 165 VSR1, BP80B, ELP, ELP1, At3g52850, F8J2.20 3702 Arabidopsis thaliana 562 Escherichia coli Biological sequence 1 1.94 36.45 VAPOR DIFFUSION, HANGING DROP 10% glycerol, 0.1 M MES pH 6.0, 30% PEG 600, 5% (w/v) PEG 1000. 289 citation entity_src_gen pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list pdbx_validate_close_contact software chem_comp_atom chem_comp_bond database_2 refine_hist repository Initial release Advisory Database references Derived calculations Other Refinement description Source and taxonomy Data collection Database references Refinement description 1 0 2014-12-10 1 1 2017-11-22 1 2 2023-12-27 _citation.journal_id_CSD _entity_src_gen.pdbx_alt_source_flag _pdbx_database_status.pdb_format_compatible _pdbx_struct_assembly.oligomeric_details _pdbx_struct_oper_list.symmetry_operation _software.classification _database_2.pdbx_DOI _database_2.pdbx_database_accession Hong Kong General Research Fund from the Research Grants Council of Hong Kong SAR 476212 N RCSB Y RCSB 2014-05-25 REL REL IOD IODIDE ION HOH water IOD 1 2 IOD IOD 201 A IOD 3 2 IOD IOD 202 A IOD 4 2 IOD IOD 203 A IOD 5 2 IOD IOD 204 A IOD 11 2 IOD IOD 205 A IOD 18 2 IOD IOD 206 A HOH 25 3 HOH HOH 301 A HOH 107 3 HOH HOH 302 A HOH 121 3 HOH HOH 303 A HOH 92 3 HOH HOH 304 A HOH 47 3 HOH HOH 305 A HOH 19 3 HOH HOH 306 A HOH 104 3 HOH HOH 307 A HOH 41 3 HOH HOH 308 A HOH 86 3 HOH HOH 309 A HOH 66 3 HOH HOH 310 A HOH 118 3 HOH HOH 311 A HOH 52 3 HOH HOH 312 A HOH 55 3 HOH HOH 313 A HOH 31 3 HOH HOH 314 A HOH 49 3 HOH HOH 315 A HOH 40 3 HOH HOH 316 A HOH 11 3 HOH HOH 317 A HOH 85 3 HOH HOH 318 A HOH 13 3 HOH HOH 319 A HOH 14 3 HOH HOH 320 A HOH 43 3 HOH HOH 321 A HOH 32 3 HOH HOH 322 A HOH 51 3 HOH HOH 323 A HOH 10 3 HOH HOH 324 A HOH 12 3 HOH HOH 325 A HOH 21 3 HOH HOH 326 A HOH 105 3 HOH HOH 327 A HOH 78 3 HOH HOH 328 A HOH 128 3 HOH HOH 329 A HOH 84 3 HOH HOH 330 A HOH 58 3 HOH HOH 331 A HOH 97 3 HOH HOH 332 A HOH 59 3 HOH HOH 333 A HOH 70 3 HOH HOH 334 A HOH 87 3 HOH HOH 335 A HOH 23 3 HOH HOH 336 A HOH 33 3 HOH HOH 337 A HOH 39 3 HOH HOH 338 A HOH 42 3 HOH HOH 339 A HOH 69 3 HOH HOH 340 A HOH 101 3 HOH HOH 341 A HOH 50 3 HOH HOH 342 A HOH 116 3 HOH HOH 343 A HOH 60 3 HOH HOH 344 A HOH 89 3 HOH HOH 345 A HOH 68 3 HOH HOH 346 A HOH 91 3 HOH HOH 347 A HOH 96 3 HOH HOH 348 A HOH 34 3 HOH HOH 349 A HOH 130 3 HOH HOH 350 A HOH 61 3 HOH HOH 351 A HOH 120 3 HOH HOH 352 A HOH 126 3 HOH HOH 353 A HOH 100 3 HOH HOH 354 A HOH 134 3 HOH HOH 355 A HOH 90 3 HOH HOH 356 A HOH 62 3 HOH HOH 357 A HOH 72 3 HOH HOH 358 A HOH 129 3 HOH HOH 359 A HOH 103 3 HOH HOH 360 A HOH 30 3 HOH HOH 361 A HOH 113 3 HOH HOH 362 A HOH 123 3 HOH HOH 363 A HOH 112 3 HOH HOH 364 A HOH 133 3 HOH HOH 365 A HOH 119 3 HOH HOH 366 A HOH 74 3 HOH HOH 367 A HOH 73 3 HOH HOH 368 A HOH 131 3 HOH HOH 369 A HOH 65 3 HOH HOH 370 A HOH 88 3 HOH HOH 371 A HOH 135 3 HOH HOH 372 A HOH 122 3 HOH HOH 373 A HOH 1 3 HOH HOH 374 A HOH 2 3 HOH HOH 375 A HOH 3 3 HOH HOH 376 A HOH 4 3 HOH HOH 377 A HOH 5 3 HOH HOH 378 A HOH 6 3 HOH HOH 379 A HOH 7 3 HOH HOH 380 A HOH 8 3 HOH HOH 381 A HOH 9 3 HOH HOH 382 A HOH 15 3 HOH HOH 383 A HOH 16 3 HOH HOH 384 A HOH 17 3 HOH HOH 385 A HOH 18 3 HOH HOH 386 A HOH 20 3 HOH HOH 387 A HOH 22 3 HOH HOH 388 A HOH 24 3 HOH HOH 389 A HOH 26 3 HOH HOH 390 A HOH 27 3 HOH HOH 391 A HOH 28 3 HOH HOH 392 A HOH 29 3 HOH HOH 393 A HOH 35 3 HOH HOH 394 A HOH 36 3 HOH HOH 395 A HOH 37 3 HOH HOH 396 A HOH 38 3 HOH HOH 397 A HOH 44 3 HOH HOH 398 A HOH 45 3 HOH HOH 399 A HOH 46 3 HOH HOH 400 A HOH 48 3 HOH HOH 401 A HOH 53 3 HOH HOH 402 A HOH 54 3 HOH HOH 403 A HOH 56 3 HOH HOH 404 A HOH 57 3 HOH HOH 405 A HOH 63 3 HOH HOH 406 A HOH 64 3 HOH HOH 407 A HOH 67 3 HOH HOH 408 A HOH 71 3 HOH HOH 409 A HOH 75 3 HOH HOH 410 A HOH 76 3 HOH HOH 411 A HOH 77 3 HOH HOH 412 A HOH 79 3 HOH HOH 413 A HOH 80 3 HOH HOH 414 A HOH 81 3 HOH HOH 415 A HOH 82 3 HOH HOH 416 A HOH 83 3 HOH HOH 417 A HOH 93 3 HOH HOH 418 A HOH 94 3 HOH HOH 419 A HOH 95 3 HOH HOH 420 A HOH 98 3 HOH HOH 421 A HOH 99 3 HOH HOH 422 A HOH 102 3 HOH HOH 423 A HOH 106 3 HOH HOH 424 A HOH 108 3 HOH HOH 425 A HOH 109 3 HOH HOH 426 A HOH 110 3 HOH HOH 427 A HOH 111 3 HOH HOH 428 A HOH 114 3 HOH HOH 429 A HOH 115 3 HOH HOH 430 A HOH 117 3 HOH HOH 431 A HOH 124 3 HOH HOH 432 A HOH 125 3 HOH HOH 433 A HOH 127 3 HOH HOH 434 A HOH 132 3 HOH HOH 435 A HOH 136 3 HOH HOH 436 A HOH 137 3 HOH HOH 437 A GLY 18 n 1 GLY 18 A SER 19 n 2 SER 19 A ARG 20 n 3 ARG 20 A PHE 21 n 4 PHE 21 A VAL 22 n 5 VAL 22 A VAL 23 n 6 VAL 23 A GLU 24 n 7 GLU 24 A LYS 25 n 8 LYS 25 A ASN 26 n 9 ASN 26 A ASN 27 n 10 ASN 27 A LEU 28 n 11 LEU 28 A LYS 29 n 12 LYS 29 A VAL 30 n 13 VAL 30 A THR 31 n 14 THR 31 A SER 32 n 15 SER 32 A PRO 33 n 16 PRO 33 A ASP 34 n 17 ASP 34 A SER 35 n 18 SER 35 A ILE 36 n 19 ILE 36 A LYS 37 n 20 LYS 37 A GLY 38 n 21 GLY 38 A ILE 39 n 22 ILE 39 A TYR 40 n 23 TYR 40 A GLU 41 n 24 GLU 41 A CYS 42 n 25 CYS 42 A ALA 43 n 26 ALA 43 A ILE 44 n 27 ILE 44 A GLY 45 n 28 GLY 45 A ASN 46 n 29 ASN 46 A PHE 47 n 30 PHE 47 A GLY 48 n 31 GLY 48 A VAL 49 n 32 VAL 49 A PRO 50 n 33 PRO 50 A GLN 51 n 34 GLN 51 A TYR 52 n 35 TYR 52 A GLY 53 n 36 GLY 53 A GLY 54 n 37 GLY 54 A THR 55 n 38 THR 55 A LEU 56 n 39 LEU 56 A VAL 57 n 40 VAL 57 A GLY 58 n 41 GLY 58 A THR 59 n 42 THR 59 A VAL 60 n 43 VAL 60 A VAL 61 n 44 VAL 61 A TYR 62 n 45 TYR 62 A PRO 63 n 46 PRO 63 A LYS 64 n 47 LYS 64 A SER 65 n 48 SER 65 A ASN 66 n 49 ASN 66 A GLN 67 n 50 GLN 67 A LYS 68 n 51 LYS 68 A ALA 69 n 52 ALA 69 A CYS 70 n 53 CYS 70 A LYS 71 n 54 LYS 71 A SER 72 n 55 SER 72 A TYR 73 n 56 TYR 73 A SER 74 n 57 SER 74 A ASP 75 n 58 ASP 75 A PHE 76 n 59 PHE 76 A ASP 77 n 60 ASP 77 A ILE 78 n 61 ILE 78 A SER 79 n 62 SER 79 A PHE 80 n 63 PHE 80 A LYS 81 n 64 LYS 81 A SER 82 n 65 SER 82 A LYS 83 n 66 LYS 83 A PRO 84 n 67 PRO 84 A GLY 85 n 68 GLY 85 A ARG 86 n 69 ARG 86 A LEU 87 n 70 LEU 87 A PRO 88 n 71 PRO 88 A THR 89 n 72 THR 89 A PHE 90 n 73 PHE 90 A VAL 91 n 74 VAL 91 A LEU 92 n 75 LEU 92 A ILE 93 n 76 ILE 93 A ASP 94 n 77 ASP 94 A ARG 95 n 78 ARG 95 A GLY 96 n 79 GLY 96 A ASP 97 n 80 ASP 97 A CYS 98 n 81 CYS 98 A TYR 99 n 82 TYR 99 A PHE 100 n 83 PHE 100 A THR 101 n 84 THR 101 A LEU 102 n 85 LEU 102 A LYS 103 n 86 LYS 103 A ALA 104 n 87 ALA 104 A TRP 105 n 88 TRP 105 A ILE 106 n 89 ILE 106 A ALA 107 n 90 ALA 107 A GLN 108 n 91 GLN 108 A GLN 109 n 92 GLN 109 A ALA 110 n 93 ALA 110 A GLY 111 n 94 GLY 111 A ALA 112 n 95 ALA 112 A ALA 113 n 96 ALA 113 A ALA 114 n 97 ALA 114 A ILE 115 n 98 ILE 115 A LEU 116 n 99 LEU 116 A VAL 117 n 100 VAL 117 A ALA 118 n 101 ALA 118 A ASP 119 n 102 ASP 119 A SER 120 n 103 SER 120 A LYS 121 n 104 LYS 121 A ALA 122 n 105 ALA 122 A GLU 123 n 106 GLU 123 A PRO 124 n 107 PRO 124 A LEU 125 n 108 LEU 125 A ILE 126 n 109 ILE 126 A THR 127 n 110 THR 127 A MET 128 n 111 MET 128 A ASP 129 n 112 ASP 129 A THR 130 n 113 THR 130 A PRO 131 n 114 PRO 131 A GLU 132 n 115 GLU 132 A GLU 133 n 116 GLU 133 A ASP 134 n 117 ASP 134 A LYS 135 n 118 LYS 135 A SER 136 n 119 SER 136 A ASP 137 n 120 ASP 137 A ALA 138 n 121 ALA 138 A ASP 139 n 122 ASP 139 A TYR 140 n 123 TYR 140 A LEU 141 n 124 LEU 141 A GLN 142 n 125 GLN 142 A ASN 143 n 126 ASN 143 A ILE 144 n 127 ILE 144 A THR 145 n 128 THR 145 A ILE 146 n 129 ILE 146 A PRO 147 n 130 PRO 147 A SER 148 n 131 SER 148 A ALA 149 n 132 ALA 149 A LEU 150 n 133 LEU 150 A ILE 151 n 134 ILE 151 A THR 152 n 135 THR 152 A LYS 153 n 136 LYS 153 A THR 154 n 137 THR 154 A LEU 155 n 138 LEU 155 A GLY 156 n 139 GLY 156 A ASP 157 n 140 ASP 157 A SER 158 n 141 SER 158 A ILE 159 n 142 ILE 159 A LYS 160 n 143 LYS 160 A SER 161 n 144 SER 161 A ALA 162 n 145 ALA 162 A LEU 163 n 146 LEU 163 A SER 164 n 147 SER 164 A GLY 165 n 148 GLY 165 A GLY 166 n 149 GLY 166 A ASP 167 n 150 ASP 167 A MET 168 n 151 MET 168 A VAL 169 n 152 VAL 169 A ASN 170 n 153 ASN 170 A MET 171 n 154 MET 171 A LYS 172 n 155 LYS 172 A LEU 173 n 156 LEU 173 A ASP 174 n 157 ASP 174 A TRP 175 n 158 TRP 175 A THR 176 n 159 THR 176 A GLU 177 n 160 GLU 177 A SER 178 n 161 SER 178 A VAL 179 n 162 VAL 179 A PRO 180 n 163 PRO 180 A HIS 181 n 164 HIS 181 A PRO 182 n 165 PRO 182 A author_and_software_defined_assembly PISA 1 monomeric 780 -2 8290 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 28 A N LEU 11 A O TYR 40 A O TYR 23 A N GLY 45 A N GLY 28 A O SER 148 A O SER 131 A O ALA 149 A O ALA 132 A N VAL 117 A N VAL 100 A O LEU 116 A O LEU 99 A N ILE 93 A N ILE 76 A O PHE 90 A O PHE 73 A N THR 59 A N THR 42 A N LEU 56 A N LEU 39 A O LEU 173 A O LEU 156 A O LYS 172 A O LYS 155 A N LYS 29 A N LYS 12 1 A CG LYS 83 A CG LYS 66 1 Y 1 A CD LYS 83 A CD LYS 66 1 Y 1 A CE LYS 83 A CE LYS 66 1 Y 1 A NZ LYS 83 A NZ LYS 66 1 Y 1 A CG ARG 86 A CG ARG 69 1 Y 1 A CD ARG 86 A CD ARG 69 1 Y 1 A NE ARG 86 A NE ARG 69 1 Y 1 A CZ ARG 86 A CZ ARG 69 1 Y 1 A NH1 ARG 86 A NH1 ARG 69 1 Y 1 A NH2 ARG 86 A NH2 ARG 69 1 Y 1 A SER 32 A -174.41 143.40 1 A SER 32 B -174.45 146.84 1 A PHE 47 170.28 162.85 1 A ASP 97 73.18 -20.78 0.1902 0.1662 0.1675 1.651 33.78 798 15966 5.01 97.65 0.13 1 FREE R-VALUE 1.84 SAD 18.99 0.90 1.11 ML FLAT BULK SOLVENT MODEL 1.651 33.78 137 1385 6 0 1242 0.007 1285 1.352 1752 11.560 470 0.061 202 0.008 227 0.2479 0.1980 1.7045 130 2645 95.00 0.2270 0.1809 1.7654 153 2630 96.00 0.2022 0.1742 1.8360 135 2648 96.00 0.2441 0.1638 1.9196 157 2683 97.00 0.2080 0.1559 2.0208 146 2701 97.00 0.1734 0.1553 2.1474 155 2711 98.00 0.1842 0.1630 2.3131 125 2742 98.00 0.2148 0.1730 2.5459 118 2758 99.00 0.1913 0.1824 2.9141 140 2739 99.00 0.1863 0.1643 3.6707 147 2781 100.00 0.1603 0.1564 33.7859 164 2755 100.00 1.65 33.78 4TJV 15984 0.026 1 74.0 15.5 97.7 0.148 1.65 1.69 19.1 15.2 94.9 refinement PHENIX (phenix.refine: 1.8.4_1496) data scaling XDS Crystal structure of protease-associated domain of Arabidopsis vacuolar sorting receptor 1 1 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 3 N N A PRO 33 A PRO 16 HELX_P A LYS 37 A LYS 20 5 AA1 5 A SER 72 A SER 55 HELX_P A ASP 77 A ASP 60 5 AA2 6 A TYR 99 A TYR 82 HELX_P A ALA 110 A ALA 93 1 AA3 12 A PRO 124 A PRO 107 HELX_P A ASP 129 A ASP 112 1 AA4 6 A ASP 137 A ASP 120 HELX_P A GLN 142 A GLN 125 1 AA5 6 A THR 152 A THR 135 HELX_P A GLY 165 A GLY 148 1 AA6 14 disulf 2.042 A CYS 70 A SG CYS 53 1_555 A CYS 98 A SG CYS 81 1_555 PROTEIN TRANSPORT Ligand-binding domain, Beta barrel, Apo form, PROTEIN TRANSPORT A SER 32 A SER 15 1 A PRO 33 A PRO 16 0.96 A SER 32 A SER 15 1 A PRO 33 A PRO 16 -0.46 VSR1_ARATH UNP 1 20 P93026 RFVVEKNNLKVTSPDSIKGIYECAIGNFGVPQYGGTLVGTVVYPKSNQKACKSYSDFDISFKSKPGRLPTFVLIDRGDCY FTLKAWIAQQAGAAAILVADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKSALSGGDMVNMKLDWTESV PHP 20 182 4TJV 20 182 P93026 A 1 3 165 1 expression tag GLY 18 4TJV A P93026 UNP 1 1 expression tag SER 19 4TJV A P93026 UNP 2 8 anti-parallel anti-parallel parallel parallel parallel anti-parallel anti-parallel A PHE 21 A PHE 4 A SER 32 A SER 15 A GLY 38 A GLY 21 A GLY 45 A GLY 28 A SER 148 A SER 131 A ILE 151 A ILE 134 A ALA 114 A ALA 97 A ALA 118 A ALA 101 A THR 89 A THR 72 A ASP 94 A ASP 77 A THR 55 A THR 38 A VAL 61 A VAL 44 A ASN 170 A ASN 153 A ASP 174 A ASP 157 A PHE 21 A PHE 4 A SER 32 A SER 15 binding site for residue IOD A 201 A IOD 201 Software 1 binding site for residue IOD A 202 A IOD 202 Software 3 binding site for residue IOD A 203 A IOD 203 Software 4 binding site for residue IOD A 204 A IOD 204 Software 2 binding site for residue IOD A 205 A IOD 205 Software 1 binding site for residue IOD A 206 A IOD 206 Software 2 A LYS 64 A LYS 47 1 1_555 A ASN 26 A ASN 9 3 1_555 A PRO 180 A PRO 163 3 1_555 A HIS 181 A HIS 164 3 1_555 A GLU 41 A GLU 24 4 1_555 A THR 152 A THR 135 4 1_555 A HOH 415 H HOH 4 1_555 A HOH 422 H HOH 4 1_555 A GLN 142 A GLN 125 2 1_656 A HOH 372 H HOH 2 1_656 A GLU 177 A GLU 160 1 1_555 A SER 19 A SER 2 2 1_556 A HOH 344 H HOH 2 1_555 4 P 1 21 1