0.025151
0.000000
0.000000
0.000000
0.020202
0.000000
0.000000
0.000000
0.005369
0.000000
0.000000
0.000000
Warner, K.D.
Chen, M.C.
Song, W.
Strack, R.L.
Thorn, A.
Jaffrey, S.R.
Ferre-D'Amare, A.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
90.000
90.000
39.760
49.500
186.260
C12 H10 F2 N2 O2
252.217
(5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one
non-polymer
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
Ba 2
137.327
BARIUM ION
non-polymer
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C9 H13 N3 O10 P2
385.161
n
CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE
RNA linking
C6 H12 O6
180.156
beta-D-fructofuranose
beta-D-fructose; D-fructose; fructose
D-saccharide, beta linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C6 H12 O6
180.156
alpha-D-glucopyranose
alpha-D-glucose; D-glucose; glucose
D-saccharide, alpha linking
H2 O
18.015
WATER
non-polymer
K 1
39.098
POTASSIUM ION
non-polymer
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
N
1
N
F
Y
2
N
C
Y
3
N
C
N
4
N
O
Y
5
N
C
Y
6
N
C
Y
7
N
C
Y
8
N
C
N
9
N
F
N
10
N
C
N
11
N
C
N
12
N
C
N
13
N
O
N
14
N
N
N
15
N
C
N
16
N
C
N
17
N
N
N
18
N
C
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
O
N
30
N
P
N
31
N
O
N
32
N
O
N
33
N
O
N
34
N
C
N
35
R
C
N
36
N
O
N
37
S
C
N
38
N
O
N
39
R
C
N
40
N
O
N
41
R
C
Y
42
N
N
Y
43
N
C
Y
44
N
N
Y
45
N
C
Y
46
N
C
N
47
N
N
Y
48
N
N
Y
49
N
C
Y
50
N
N
Y
51
N
C
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
BA
N
67
N
O
N
68
N
P
N
69
N
O
N
70
N
O
N
71
N
O
N
72
N
C
N
73
R
C
N
74
N
O
N
75
S
C
N
76
N
O
N
77
R
C
N
78
N
O
N
79
R
C
N
80
N
N
N
81
N
C
N
82
N
O
N
83
N
N
N
84
N
C
N
85
N
N
N
86
N
C
N
87
N
C
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
S
P
N
103
N
O
N
104
N
O
N
105
N
P
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
O
N
110
N
C
N
111
R
C
N
112
N
O
N
113
R
C
N
114
N
O
N
115
R
C
N
116
N
O
N
117
R
C
N
118
N
N
N
119
N
C
N
120
N
O
N
121
N
N
N
122
N
C
N
123
N
N
N
124
N
C
N
125
N
C
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
C
N
140
R
C
N
141
S
C
N
142
S
C
N
143
R
C
N
144
N
C
N
145
N
O
N
146
N
O
N
147
N
O
N
148
N
O
N
149
N
O
N
150
N
O
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
O
N
164
N
P
N
165
N
O
N
166
N
O
N
167
N
O
N
168
N
C
N
169
R
C
N
170
N
O
N
171
S
C
N
172
N
O
N
173
R
C
N
174
N
O
N
175
R
C
Y
176
N
N
Y
177
N
C
Y
178
N
N
Y
179
N
C
N
180
N
C
N
181
N
O
N
182
N
N
N
183
N
C
N
184
N
N
N
185
N
N
Y
186
N
C
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
S
C
N
202
R
C
N
203
S
C
N
204
S
C
N
205
R
C
N
206
N
C
N
207
N
O
N
208
N
O
N
209
N
O
N
210
N
O
N
211
N
O
N
212
N
O
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
O
N
226
N
H
N
227
N
H
N
228
N
K
N
229
N
O
N
230
N
P
N
231
N
O
N
232
N
O
N
233
N
O
N
234
N
C
N
235
R
C
N
236
N
O
N
237
S
C
N
238
N
O
N
239
R
C
N
240
N
O
N
241
R
C
N
242
N
N
N
243
N
C
N
244
N
O
N
245
N
N
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
1
N
doub
N
2
N
sing
Y
3
N
doub
Y
4
N
sing
N
5
N
sing
N
6
Z
doub
N
7
N
sing
N
8
N
sing
Y
9
N
sing
Y
10
N
doub
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
Y
15
N
doub
Y
16
N
sing
N
17
N
doub
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
doub
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
Y
54
N
sing
Y
55
N
sing
Y
56
N
doub
N
57
N
sing
Y
58
N
sing
Y
59
N
sing
Y
60
N
doub
N
61
N
sing
Y
62
N
doub
N
63
N
sing
N
64
N
sing
Y
65
N
sing
Y
66
N
doub
N
67
N
sing
Y
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
doub
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
Y
192
N
sing
Y
193
N
sing
Y
194
N
doub
N
195
N
sing
Y
196
N
sing
N
197
N
sing
Y
198
N
doub
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
doub
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
US
Nat.Struct.Mol.Biol.
1545-9985
21
658
663
10.1038/nsmb.2865
25026079
Structural basis for activity of highly efficient RNA mimics of green fluorescent protein.
2014
10.2210/pdb4ts0/pdb
pdb_00004ts0
100
1
CCD
2013-08-16
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
1.5498
1.0
5.0.2
ALS
1.5498
SYNCHROTRON
ALS BEAMLINE 5.0.2
14394.598
Spinach RNA aptamer, bimolecular construct
1
syn
polymer
15220.934
Spinach RNA aptamer, bimolecular construct
1
syn
polymer
342.297
beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
4
man
branched
39.098
POTASSIUM ION
10
syn
non-polymer
137.327
BARIUM ION
1
syn
non-polymer
252.217
(5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one
1
syn
non-polymer
18.015
water
15
nat
water
sucrose
no
yes
GACGCGACCGAAUGAAAUGGUGAAGGACGGGUCCAGCCGGCUG(CCC)
GACGCGACCGAAUGAAAUGGUGAAGGACGGGUCCAGCCGGCUGC
X
polyribonucleotide
no
yes
GCAGCCGGCUUGUUGAGUAGAGUGUGAGCUCCGUAACUGGUCGCGU(CCC)
GCAGCCGGCUUGUUGAGUAGAGUGUGAGCUCCGUAACUGGUCGCGUC
Y
polyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
1
3.09
60.19
VAPOR DIFFUSION, HANGING DROP
20% PEG 3350, 0.25M NaCl, 0.1M succinate-K pH 7.0, 15% sucrose
298
-1.000
1
19
X
1
Y
101
-6.943
X_G1:CCC101_Y
1
-4.936
-0.016
0.386
-0.191
0.446
1
20
X
2
Y
94
4.956
X_A2:U94_Y
2
-13.584
-0.047
0.249
0.295
4.037
1
19
X
3
Y
93
-3.284
X_C3:G93_Y
3
-14.655
-0.083
0.255
-0.030
-3.543
1
19
X
4
Y
92
-0.977
X_G4:C92_Y
4
-14.346
0.029
0.259
-0.154
1.380
1
19
X
5
Y
91
2.974
X_C5:G91_Y
5
-12.530
-0.041
0.279
-0.085
1.361
1
19
X
6
Y
90
-0.673
X_G6:C90_Y
6
-7.447
-0.119
0.337
-0.129
5.385
1
20
X
7
Y
89
-0.277
X_A7:U89_Y
7
-7.819
-0.367
0.157
-0.297
4.534
1
19
X
8
Y
88
-4.065
X_C8:G88_Y
8
-9.176
0.555
0.053
-0.350
-3.027
1
19
X
9
Y
87
-4.924
X_C9:G87_Y
9
-0.891
0.257
0.064
-0.377
-10.759
1
20
X
12
Y
86
-3.041
X_A12:U86_Y
10
-2.115
0.140
-0.016
-0.229
-18.094
1
19
X
14
Y
85
0.156
X_G14:C85_Y
11
-13.016
-0.098
-0.356
-0.091
1.423
1
20
X
17
Y
82
13.583
X_A17:U82_Y
12
-17.739
-0.120
-0.455
-0.041
3.621
5
X
18
Y
81
40.577
X_U18:G81_Y
13
-4.144
3.058
-0.590
0.812
5.363
1
19
X
19
Y
80
7.434
X_G19:C80_Y
14
-2.557
0.360
0.404
0.053
-0.486
1
19
X
20
Y
79
1.800
X_G20:C79_Y
15
-18.721
-0.332
0.149
-0.225
-0.974
1
16
X
21
Y
78
5.755
X_U21:U78_Y
16
-21.937
-2.264
0.681
-1.980
-20.936
1
19
X
22
Y
77
0.519
X_G22:C77_Y
17
-18.660
-0.532
-0.181
-0.067
-16.689
1
8
X
23
Y
76
-17.000
X_A23:G76_Y
18
0.615
-0.295
-0.093
1.567
-7.662
X
24
Y
75
-44.110
X_A24:A75_Y
19
2.681
3.792
-0.474
1.686
-13.066
Y
66
Y
73
-135.449
Y_U66:U73_Y
20
16.447
-1.302
0.914
-4.467
25.859
3
6
Y
68
Y
72
86.320
Y_G68:G72_Y
21
-3.779
-1.600
-1.018
-3.638
3.603
3
6
X
30
Y
70
-84.165
X_G30:G70_Y
22
-3.887
1.937
0.050
3.490
-4.495
1
20
X
32
Y
64
-5.236
X_U32:A64_Y
23
6.473
-0.291
0.158
-0.073
9.526
1
19
X
33
Y
63
7.182
X_C33:G63_Y
24
-12.551
-0.059
-0.083
-0.089
3.925
1
19
X
34
Y
60
-1.094
X_C34:G60_Y
25
-10.956
0.150
-0.038
-0.185
4.905
1
20
X
35
Y
59
8.320
X_A35:U59_Y
26
-13.448
0.161
0.120
0.001
2.589
1
19
X
36
Y
57
-4.432
X_G36:C57_Y
27
-13.588
-0.828
0.352
-0.548
5.815
1
19
X
37
Y
56
-3.722
X_C37:G56_Y
28
-15.395
-0.170
0.081
-0.106
4.348
1
19
X
38
Y
55
-2.101
X_C38:G55_Y
29
-7.718
-0.218
0.011
-0.109
-3.270
1
19
X
39
Y
54
-0.401
X_G39:C54_Y
30
-16.713
-0.399
0.026
-0.082
-7.410
1
19
X
40
Y
53
-0.260
X_G40:C53_Y
31
-15.659
-0.039
-0.242
-0.029
-3.442
1
19
X
41
Y
52
-3.078
X_C41:G52_Y
32
-11.623
0.544
0.441
-0.135
0.533
1
20
X
42
Y
51
0.264
X_U42:A51_Y
33
-20.278
0.166
0.398
-0.037
-11.644
1
19
X
43
Y
50
-4.173
X_G43:C50_Y
34
-14.990
0.783
0.260
-0.486
-0.480
1
19
X
44
Y
49
-3.553
X_CCC44:G49_Y
35
-6.919
-0.475
0.458
-0.018
2.975
30.026
X
X
1
2
9.182
Y
Y
101
94
3.240
4.738
0.009
-1.464
XX_G1A2:U94CCC101_YY
1
-0.416
0.806
29.655
-3.756
-0.099
2.904
35.849
X
X
2
3
8.883
Y
Y
94
93
3.120
5.448
0.515
-1.309
XX_A2C3:G93U94_YY
2
0.822
-1.340
35.437
-2.850
-0.728
2.299
36.344
X
X
3
4
21.356
Y
Y
93
92
3.139
13.039
0.138
-1.857
XX_C3G4:C92G93_YY
3
1.468
-2.404
33.968
-4.545
-0.045
2.769
29.983
X
X
4
5
8.088
Y
Y
92
91
3.046
4.171
0.462
-1.860
XX_G4C5:G91C92_YY
4
0.328
-0.636
29.696
-4.364
-0.833
2.504
29.730
X
X
5
6
13.675
Y
Y
91
90
3.031
6.950
-0.207
-1.985
XX_C5G6:C90G91_YY
5
-1.857
3.654
28.865
-5.120
0.068
2.663
31.352
X
X
6
7
12.260
Y
Y
90
89
3.039
6.574
-0.263
-1.574
XX_G6A7:U89C90_YY
6
-1.923
3.586
30.613
-4.005
0.167
3.175
39.368
X
X
7
8
3.581
Y
Y
89
88
3.275
2.411
0.167
-1.558
XX_A7C8:G88U89_YY
7
-0.698
1.037
39.291
-2.595
-0.329
2.710
35.286
X
X
8
9
15.624
Y
Y
88
87
3.361
9.361
-0.298
-2.027
XX_C8C9:G87G88_YY
8
1.600
-2.670
34.023
-4.657
0.715
2.736
37.415
X
X
9
12
11.891
Y
Y
87
86
3.293
7.577
-1.523
-2.228
XX_C9A12:U86G87_YY
9
1.415
-2.220
36.640
-4.401
2.547
3.221
52.254
X
X
12
14
3.273
Y
Y
86
85
3.267
2.881
-2.549
-1.483
XX_A12G14:C85U86_YY
10
-0.784
0.890
52.174
-1.873
2.843
2.863
87.539
X
X
14
17
5.823
Y
Y
85
82
3.306
8.029
3.518
0.255
XX_G14A17:U82C85_YY
11
-13.287
9.636
86.427
0.020
-2.815
3.404
40.216
X
X
17
18
-1.874
Y
Y
82
81
3.410
-1.288
1.118
-1.489
XX_A17U18:G81U82_YY
12
-1.754
2.551
40.160
-2.013
-1.833
4.952
9.018
X
X
18
19
-15.444
Y
Y
81
80
3.712
-2.330
-2.414
-2.799
XX_U18G19:C80G81_YY
13
-3.614
23.957
7.929
-10.236
3.620
2.598
29.531
X
X
19
20
16.910
Y
Y
80
79
3.232
8.462
0.465
-1.901
XX_G19G20:C79C80_YY
14
5.007
-10.005
27.881
-5.381
0.066
2.435
29.610
X
X
20
21
12.120
Y
Y
79
78
2.981
6.055
-0.077
-1.840
XX_G20U21:U78C79_YY
15
-9.019
18.052
27.586
-4.701
-1.487
3.100
43.889
X
X
21
22
17.577
Y
Y
78
77
3.730
12.951
-0.317
-1.604
XX_U21G22:C77U78_YY
16
2.873
-3.900
41.931
-3.462
0.715
2.394
33.394
X
X
22
23
16.159
Y
Y
77
76
2.978
9.172
-0.935
-1.739
XX_G22A23:G76C77_YY
17
0.375
-0.660
32.142
-4.301
1.679
2.839
42.234
X
X
23
24
3.141
Y
Y
76
75
3.215
2.253
-1.518
-1.738
XX_A23A24:A75G76_YY
18
7.046
-9.825
41.610
-2.628
2.781
-4.003
177.109
X
Y
24
66
-69.472
Y
Y
75
73
-5.087
-138.079
2.587
-1.651
XY_A24U66:U73A75_YY
19
-108.568
54.624
96.691
-2.184
-0.226
-1.893
174.132
Y
Y
66
68
-68.640
Y
Y
73
72
0.975
-134.581
-4.985
-0.578
YY_U66G68:G72U73_YY
20
109.201
-55.696
57.352
-0.501
2.324
6.748
34.125
X
X
30
32
-2.234
Y
Y
70
64
6.317
-1.296
2.225
-2.085
XX_G30U32:A64G70_YY
21
8.924
-15.379
32.946
-3.135
-0.913
2.248
30.922
X
X
32
33
16.025
Y
Y
64
63
2.811
8.437
1.355
-1.954
XX_U32C33:G63A64_YY
22
1.491
-2.832
29.739
-4.954
-2.313
3.032
47.809
X
X
33
34
8.943
Y
Y
63
60
3.274
7.223
1.400
-1.597
XX_C33C34:G60G63_YY
23
0.663
-0.821
47.288
-2.528
-1.676
2.817
34.811
X
X
34
35
11.012
Y
Y
60
59
3.234
6.545
0.873
-1.585
XX_C34A35:U59G60_YY
24
-2.673
4.497
34.108
-3.581
-1.840
2.673
40.262
X
X
35
36
12.066
Y
Y
59
57
3.119
8.247
0.803
-1.700
XX_A35G36:C57U59_YY
25
-2.370
3.468
39.374
-3.306
-1.406
3.086
35.382
X
X
36
37
4.341
Y
Y
57
56
3.178
2.636
0.376
-1.252
XX_G36C37:G56C57_YY
26
0.683
-1.125
35.281
-2.432
-0.521
2.854
32.763
X
X
37
38
9.428
Y
Y
56
55
3.223
5.295
0.025
-2.081
XX_C37C38:G55G56_YY
27
1.080
-1.923
32.326
-4.542
0.129
2.284
27.992
X
X
38
39
21.199
Y
Y
55
54
3.349
10.031
0.693
-2.494
XX_C38G39:C54G55_YY
28
1.273
-2.691
26.136
-7.276
-1.163
2.684
36.934
X
X
39
40
17.337
Y
Y
54
53
3.251
10.830
-0.119
-1.503
XX_G39G40:C53C54_YY
29
1.384
-2.215
35.337
-3.730
0.362
2.697
35.902
X
X
40
41
16.128
Y
Y
53
52
3.131
9.797
-0.884
-1.539
XX_G40C41:G52C53_YY
30
-4.610
7.589
34.281
-3.777
0.832
2.889
34.436
X
X
41
42
6.877
Y
Y
52
51
3.020
4.060
0.469
-1.180
XX_C41U42:A51G52_YY
31
2.223
-3.766
34.133
-2.566
-0.478
1.579
36.089
X
X
42
43
31.365
Y
Y
51
50
3.098
18.555
-0.016
-2.197
XX_U42G43:C50A51_YY
32
-0.564
0.953
31.086
-5.576
-0.035
2.759
22.347
X
X
43
44
10.228
Y
Y
50
49
3.081
3.942
0.718
-1.358
XX_G43CCC44:G49C50_YY
33
-1.085
2.814
21.974
-4.828
-2.217
entity
pdbx_database_status
pdbx_entity_src_syn
pdbx_struct_oper_list
software
atom_site
atom_site_anisotrop
chem_comp
entity
entity_name_com
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_molecule_features
pdbx_nonpoly_scheme
pdbx_struct_conn_angle
pdbx_validate_close_contact
refine_hist
struct_asym
struct_conn
struct_conn_type
struct_site
struct_site_gen
atom_site
atom_site_anisotrop
chem_comp
database_2
entity
ndb_struct_na_base_pair
ndb_struct_na_base_pair_step
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_poly_seq_scheme
pdbx_struct_assembly_gen
pdbx_struct_conn_angle
pdbx_unobs_or_zero_occ_residues
struct_asym
struct_conn
struct_ref_seq
chem_comp_atom
chem_comp_bond
repository
Initial release
Carbohydrate remediation
repository
Remediation
Database references
Database references
Derived calculations
Other
Refinement description
Source and taxonomy
Structure summary
Advisory
Atomic model
Data collection
Derived calculations
Non-polymer description
Refinement description
Structure summary
Advisory
Atomic model
Data collection
Database references
Derived calculations
Structure summary
Data collection
1
0
2014-07-23
1
1
2014-08-06
1
2
2014-10-01
1
3
2017-11-22
2
0
2020-07-29
3
0
2022-04-20
3
1
2023-12-27
_entity.pdbx_description
_pdbx_database_status.pdb_format_compatible
_pdbx_entity_src_syn.pdbx_alt_source_flag
_pdbx_struct_oper_list.symmetry_operation
_software.classification
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.pdbx_formal_charge
_atom_site.type_symbol
_atom_site_anisotrop.id
_atom_site_anisotrop.pdbx_label_asym_id
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.src_method
_entity.type
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_refine_hist.pdbx_number_atoms_nucleic_acid
_refine_hist.pdbx_number_atoms_protein
_struct_asym.entity_id
_struct_conn_type.id
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_formal_charge
_atom_site.type_symbol
_atom_site_anisotrop.U[1][1]
_atom_site_anisotrop.U[1][2]
_atom_site_anisotrop.U[1][3]
_atom_site_anisotrop.U[2][2]
_atom_site_anisotrop.U[2][3]
_atom_site_anisotrop.U[3][3]
_atom_site_anisotrop.id
_atom_site_anisotrop.pdbx_auth_asym_id
_atom_site_anisotrop.pdbx_auth_atom_id
_atom_site_anisotrop.pdbx_auth_comp_id
_atom_site_anisotrop.pdbx_auth_seq_id
_atom_site_anisotrop.pdbx_label_asym_id
_atom_site_anisotrop.pdbx_label_atom_id
_atom_site_anisotrop.pdbx_label_comp_id
_atom_site_anisotrop.pdbx_label_seq_id
_atom_site_anisotrop.type_symbol
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.value
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_auth_seq_align_end
A
SUC
303
n
A
GLC
1
A
SUC
303
n
A
FRU
2
A
SUC
302
n
B
GLC
1
A
SUC
302
n
B
FRU
2
A
SUC
301
n
C
GLC
1
A
SUC
301
n
C
FRU
2
A
SUC
304
n
D
GLC
1
A
SUC
304
n
D
FRU
2
DFrufb
b-D-fructofuranose
b-D-Fruf
Fru
DGlcpa
a-D-glucopyranose
a-D-Glcp
Glc
N
RCSB
Y
RCSB
2014-06-18
REL
REL
oligosaccharide
DFrufb2-1DGlcpa
3
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,2,1/[ha122h-2b_2-5][a2122h-1a_1-5]/1-2/a2-b1
3
PDB2Glycan
1.1.0
WURCS
[][b-D-Fruf]{[(2+1)][a-D-Glcp]{}}
3
PDB-CARE
LINUCS
C1
O2
GLC
FRU
1
2
3
O1
HO2
sing
n
n
K
POTASSIUM ION
BA
BARIUM ION
38E
(5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one
HOH
water
32630
synthetic construct
sample
1
44
32630
synthetic construct
sample
1
47
Nutrient
oligosaccharide with reducing-end-to-reducing-end glycosidic bond
sucrose
Oligosaccharide
K
208
4
K
K
101
X
K
253
4
K
K
102
X
K
252
4
K
K
103
X
K
251
4
K
K
104
X
K
1
4
K
K
105
X
BA
201
5
BA
BA
106
X
K
202
4
K
K
201
Y
K
255
4
K
K
202
Y
K
203
4
K
K
203
Y
K
204
4
K
K
204
Y
K
254
4
K
K
205
Y
XDF
1
6
38E
38E
206
Y
HOH
13
7
HOH
HOH
201
X
HOH
16
7
HOH
HOH
202
X
HOH
2
7
HOH
HOH
203
X
HOH
5
7
HOH
HOH
204
X
HOH
8
7
HOH
HOH
205
X
HOH
14
7
HOH
HOH
206
X
HOH
10
7
HOH
HOH
207
X
HOH
11
7
HOH
HOH
301
Y
HOH
9
7
HOH
HOH
302
Y
HOH
4
7
HOH
HOH
303
Y
HOH
15
7
HOH
HOH
304
Y
HOH
6
7
HOH
HOH
305
Y
HOH
7
7
HOH
HOH
306
Y
HOH
3
7
HOH
HOH
307
Y
HOH
12
7
HOH
HOH
308
Y
G
1
n
1
G
1
X
A
2
n
2
A
2
X
C
3
n
3
C
3
X
G
4
n
4
G
4
X
C
5
n
5
C
5
X
G
6
n
6
G
6
X
A
7
n
7
A
7
X
C
8
n
8
C
8
X
C
9
n
9
C
9
X
G
10
n
10
G
10
X
A
11
n
11
A
11
X
A
12
n
12
A
12
X
U
13
n
13
U
13
X
G
14
n
14
G
14
X
A
15
n
15
A
15
X
A
16
n
16
A
16
X
A
17
n
17
A
17
X
U
18
n
18
U
18
X
G
19
n
19
G
19
X
G
20
n
20
G
20
X
U
21
n
21
U
21
X
G
22
n
22
G
22
X
A
23
n
23
A
23
X
A
24
n
24
A
24
X
G
25
n
25
G
25
X
G
26
n
26
G
26
X
A
27
n
27
A
27
X
C
28
n
28
C
28
X
G
29
n
29
G
29
X
G
30
n
30
G
30
X
G
31
n
31
G
31
X
U
32
n
32
U
32
X
C
33
n
33
C
33
X
C
34
n
34
C
34
X
A
35
n
35
A
35
X
G
36
n
36
G
36
X
C
37
n
37
C
37
X
C
38
n
38
C
38
X
G
39
n
39
G
39
X
G
40
n
40
G
40
X
C
41
n
41
C
41
X
U
42
n
42
U
42
X
G
43
n
43
G
43
X
CCC
44
n
44
CCC
44
X
G
49
n
1
G
49
Y
C
50
n
2
C
50
Y
A
51
n
3
A
51
Y
G
52
n
4
G
52
Y
C
53
n
5
C
53
Y
C
54
n
6
C
54
Y
G
55
n
7
G
55
Y
G
56
n
8
G
56
Y
C
57
n
9
C
57
Y
U
58
n
10
U
58
Y
U
59
n
11
U
59
Y
G
60
n
12
G
60
Y
U
61
n
13
U
61
Y
U
62
n
14
U
62
Y
G
63
n
15
G
63
Y
A
64
n
16
A
64
Y
G
65
n
17
G
65
Y
U
66
n
18
U
66
Y
A
67
n
19
A
67
Y
G
68
n
20
G
68
Y
A
69
n
21
A
69
Y
G
70
n
22
G
70
Y
U
71
n
23
U
71
Y
G
72
n
24
G
72
Y
U
73
n
25
U
73
Y
G
74
n
26
G
74
Y
A
75
n
27
A
75
Y
G
76
n
28
G
76
Y
C
77
n
29
C
77
Y
U
78
n
30
U
78
Y
C
79
n
31
C
79
Y
C
80
n
32
C
80
Y
G
81
n
33
G
81
Y
U
82
n
34
U
82
Y
A
83
n
35
A
83
Y
A
84
n
36
A
84
Y
C
85
n
37
C
85
Y
U
86
n
38
U
86
Y
G
87
n
39
G
87
Y
G
88
n
40
G
88
Y
U
89
n
41
U
89
Y
C
90
n
42
C
90
Y
G
91
n
43
G
91
Y
C
92
n
44
C
92
Y
G
93
n
45
G
93
Y
U
94
n
46
U
94
Y
CCC
95
n
47
CCC
101
Y
0.8627
0.1651
-0.3961
0.3815
0.0446
0.2468
0.0228
0.1952
-0.2094
0.0904
0.0152
-0.2876
0.0089
-0.1189
-0.0380
0.1893
-0.0030
-0.0453
0.3340
-0.0870
0.3067
refined
37.6314
26.8959
1.4246
X-RAY DIFFRACTION
X
1
X
44
X-RAY DIFFRACTION
1
Y
49
Y
94
X-RAY DIFFRACTION
1
author_and_software_defined_assembly
PISA
2
dimeric
10170
-60
14690
X
G
14
A
O2'
G
14
1_555
X
K
104
J
K
K
1_555
X
A
16
A
OP1
A
16
1_555
69.4
X
G
14
A
O2'
G
14
1_555
X
K
104
J
K
K
1_555
X
U
18
A
O4
U
18
1_555
145.9
X
A
16
A
OP1
A
16
1_555
X
K
104
J
K
K
1_555
X
U
18
A
O4
U
18
1_555
112.7
X
G
20
A
O6
G
20
1_555
X
BA
106
L
BA
BA
1_555
Y
U
78
B
O4
U
30
1_555
74.7
X
A
23
A
OP2
A
23
1_555
X
K
103
I
K
K
1_555
X
HOH
205
S
O
HOH
1_555
87.5
X
A
23
A
OP2
A
23
1_555
X
K
103
I
K
K
1_555
X
HOH
207
S
O
HOH
1_555
118.1
X
HOH
205
S
O
HOH
1_555
X
K
103
I
K
K
1_555
X
HOH
207
S
O
HOH
1_555
63.9
X
A
23
A
OP2
A
23
1_555
X
K
103
I
K
K
1_555
Y
HOH
301
T
O
HOH
1_555
142.3
X
HOH
205
S
O
HOH
1_555
X
K
103
I
K
K
1_555
Y
HOH
301
T
O
HOH
1_555
114.2
X
HOH
207
S
O
HOH
1_555
X
K
103
I
K
K
1_555
Y
HOH
301
T
O
HOH
1_555
55.8
X
A
23
A
OP2
A
23
1_555
X
K
103
I
K
K
1_555
Y
HOH
302
T
O
HOH
1_555
136.5
X
HOH
205
S
O
HOH
1_555
X
K
103
I
K
K
1_555
Y
HOH
302
T
O
HOH
1_555
106.1
X
HOH
207
S
O
HOH
1_555
X
K
103
I
K
K
1_555
Y
HOH
302
T
O
HOH
1_555
104.8
Y
HOH
301
T
O
HOH
1_555
X
K
103
I
K
K
1_555
Y
HOH
302
T
O
HOH
1_555
69.2
X
G
25
A
O6
G
25
1_555
X
K
101
G
K
K
1_555
X
G
26
A
O6
G
26
1_555
85.4
X
G
25
A
O6
G
25
1_555
X
K
101
G
K
K
1_555
X
G
29
A
O6
G
29
1_555
63.9
X
G
26
A
O6
G
26
1_555
X
K
101
G
K
K
1_555
X
G
29
A
O6
G
29
1_555
89.0
X
G
25
A
O6
G
25
1_555
X
K
101
G
K
K
1_555
X
G
30
A
O6
G
30
1_555
135.1
X
G
26
A
O6
G
26
1_555
X
K
101
G
K
K
1_555
X
G
30
A
O6
G
30
1_555
77.6
X
G
29
A
O6
G
29
1_555
X
K
101
G
K
K
1_555
X
G
30
A
O6
G
30
1_555
74.5
X
G
25
A
O6
G
25
1_555
X
K
101
G
K
K
1_555
Y
G
65
B
O6
G
17
1_555
95.7
X
G
26
A
O6
G
26
1_555
X
K
101
G
K
K
1_555
Y
G
65
B
O6
G
17
1_555
71.2
X
G
29
A
O6
G
29
1_555
X
K
101
G
K
K
1_555
Y
G
65
B
O6
G
17
1_555
153.1
X
G
30
A
O6
G
30
1_555
X
K
101
G
K
K
1_555
Y
G
65
B
O6
G
17
1_555
116.7
X
G
25
A
O6
G
25
1_555
X
K
101
G
K
K
1_555
Y
G
68
B
O6
G
20
1_555
60.3
X
G
26
A
O6
G
26
1_555
X
K
101
G
K
K
1_555
Y
G
68
B
O6
G
20
1_555
127.1
X
G
29
A
O6
G
29
1_555
X
K
101
G
K
K
1_555
Y
G
68
B
O6
G
20
1_555
107.0
X
G
30
A
O6
G
30
1_555
X
K
101
G
K
K
1_555
Y
G
68
B
O6
G
20
1_555
154.8
Y
G
65
B
O6
G
17
1_555
X
K
101
G
K
K
1_555
Y
G
68
B
O6
G
20
1_555
73.7
X
G
25
A
O6
G
25
1_555
X
K
101
G
K
K
1_555
Y
G
70
B
O6
G
22
1_555
144.1
X
G
26
A
O6
G
26
1_555
X
K
101
G
K
K
1_555
Y
G
70
B
O6
G
22
1_555
116.1
X
G
29
A
O6
G
29
1_555
X
K
101
G
K
K
1_555
Y
G
70
B
O6
G
22
1_555
138.9
X
G
30
A
O6
G
30
1_555
X
K
101
G
K
K
1_555
Y
G
70
B
O6
G
22
1_555
79.7
Y
G
65
B
O6
G
17
1_555
X
K
101
G
K
K
1_555
Y
G
70
B
O6
G
22
1_555
67.8
Y
G
68
B
O6
G
20
1_555
X
K
101
G
K
K
1_555
Y
G
70
B
O6
G
22
1_555
84.2
X
G
25
A
O6
G
25
1_555
X
K
101
G
K
K
1_555
Y
G
72
B
O6
G
24
1_555
98.3
X
G
26
A
O6
G
26
1_555
X
K
101
G
K
K
1_555
Y
G
72
B
O6
G
24
1_555
155.7
X
G
29
A
O6
G
29
1_555
X
K
101
G
K
K
1_555
Y
G
72
B
O6
G
24
1_555
71.6
X
G
30
A
O6
G
30
1_555
X
K
101
G
K
K
1_555
Y
G
72
B
O6
G
24
1_555
83.0
Y
G
65
B
O6
G
17
1_555
X
K
101
G
K
K
1_555
Y
G
72
B
O6
G
24
1_555
131.7
Y
G
68
B
O6
G
20
1_555
X
K
101
G
K
K
1_555
Y
G
72
B
O6
G
24
1_555
74.0
Y
G
70
B
O6
G
22
1_555
X
K
101
G
K
K
1_555
Y
G
72
B
O6
G
24
1_555
74.1
X
G
25
A
O3'
G
25
1_555
X
K
105
K
K
K
1_555
X
G
25
A
O2'
G
25
1_555
49.4
X
G
25
A
O3'
G
25
1_555
X
K
105
K
K
K
1_555
X
G
26
A
OP2
G
26
1_555
48.0
X
G
25
A
O2'
G
25
1_555
X
K
105
K
K
K
1_555
X
G
26
A
OP2
G
26
1_555
95.4
X
G
25
A
O3'
G
25
1_555
X
K
105
K
K
K
1_555
Y
HOH
304
T
O
HOH
1_555
120.2
X
G
25
A
O2'
G
25
1_555
X
K
105
K
K
K
1_555
Y
HOH
304
T
O
HOH
1_555
70.8
X
G
26
A
OP2
G
26
1_555
X
K
105
K
K
K
1_555
Y
HOH
304
T
O
HOH
1_555
161.8
X
G
25
A
O3'
G
25
1_555
X
K
105
K
K
K
1_555
Y
HOH
305
T
O
HOH
1_555
106.7
X
G
25
A
O2'
G
25
1_555
X
K
105
K
K
K
1_555
Y
HOH
305
T
O
HOH
1_555
129.5
X
G
26
A
OP2
G
26
1_555
X
K
105
K
K
K
1_555
Y
HOH
305
T
O
HOH
1_555
88.4
Y
HOH
304
T
O
HOH
1_555
X
K
105
K
K
K
1_555
Y
HOH
305
T
O
HOH
1_555
109.5
X
G
25
A
O3'
G
25
1_555
X
K
105
K
K
K
1_555
Y
HOH
306
T
O
HOH
1_555
104.6
X
G
25
A
O2'
G
25
1_555
X
K
105
K
K
K
1_555
Y
HOH
306
T
O
HOH
1_555
152.7
X
G
26
A
OP2
G
26
1_555
X
K
105
K
K
K
1_555
Y
HOH
306
T
O
HOH
1_555
57.5
Y
HOH
304
T
O
HOH
1_555
X
K
105
K
K
K
1_555
Y
HOH
306
T
O
HOH
1_555
134.7
Y
HOH
305
T
O
HOH
1_555
X
K
105
K
K
K
1_555
Y
HOH
306
T
O
HOH
1_555
59.0
X
G
25
A
O6
G
25
1_555
Y
K
201
M
K
K
1_555
X
G
29
A
O6
G
29
1_555
62.6
X
G
25
A
O6
G
25
1_555
Y
K
201
M
K
K
1_555
Y
G
68
B
O6
G
20
1_555
61.8
X
G
29
A
O6
G
29
1_555
Y
K
201
M
K
K
1_555
Y
G
68
B
O6
G
20
1_555
95.3
X
G
25
A
O6
G
25
1_555
Y
K
201
M
K
K
1_555
Y
G
72
B
O6
G
24
1_555
101.8
X
G
29
A
O6
G
29
1_555
Y
K
201
M
K
K
1_555
Y
G
72
B
O6
G
24
1_555
66.0
Y
G
68
B
O6
G
20
1_555
Y
K
201
M
K
K
1_555
Y
G
72
B
O6
G
24
1_555
69.3
X
G
25
A
O6
G
25
1_555
Y
K
201
M
K
K
1_555
Y
U
73
B
O2'
U
25
1_555
150.6
X
G
29
A
O6
G
29
1_555
Y
K
201
M
K
K
1_555
Y
U
73
B
O2'
U
25
1_555
142.8
Y
G
68
B
O6
G
20
1_555
Y
K
201
M
K
K
1_555
Y
U
73
B
O2'
U
25
1_555
95.1
Y
G
72
B
O6
G
24
1_555
Y
K
201
M
K
K
1_555
Y
U
73
B
O2'
U
25
1_555
84.7
X
G
25
A
O6
G
25
1_555
Y
K
201
M
K
K
1_555
Y
U
73
B
O2
U
25
1_555
86.1
X
G
29
A
O6
G
29
1_555
Y
K
201
M
K
K
1_555
Y
U
73
B
O2
U
25
1_555
148.6
Y
G
68
B
O6
G
20
1_555
Y
K
201
M
K
K
1_555
Y
U
73
B
O2
U
25
1_555
68.4
Y
G
72
B
O6
G
24
1_555
Y
K
201
M
K
K
1_555
Y
U
73
B
O2
U
25
1_555
126.2
Y
U
73
B
O2'
U
25
1_555
Y
K
201
M
K
K
1_555
Y
U
73
B
O2
U
25
1_555
67.6
X
G
25
A
O6
G
25
1_555
Y
K
201
M
K
K
1_555
Y
G
74
B
O6
G
26
1_555
97.5
X
G
29
A
O6
G
29
1_555
Y
K
201
M
K
K
1_555
Y
G
74
B
O6
G
26
1_555
55.0
Y
G
68
B
O6
G
20
1_555
Y
K
201
M
K
K
1_555
Y
G
74
B
O6
G
26
1_555
150.2
Y
G
72
B
O6
G
24
1_555
Y
K
201
M
K
K
1_555
Y
G
74
B
O6
G
26
1_555
96.9
Y
U
73
B
O2'
U
25
1_555
Y
K
201
M
K
K
1_555
Y
G
74
B
O6
G
26
1_555
110.2
Y
U
73
B
O2
U
25
1_555
Y
K
201
M
K
K
1_555
Y
G
74
B
O6
G
26
1_555
135.2
X
G
26
A
OP2
G
26
1_555
Y
K
202
N
K
K
1_555
X
G
26
A
O5'
G
26
1_555
47.7
X
G
26
A
OP2
G
26
1_555
Y
K
202
N
K
K
1_555
Y
U
61
B
O3'
U
13
1_555
167.1
X
G
26
A
O5'
G
26
1_555
Y
K
202
N
K
K
1_555
Y
U
61
B
O3'
U
13
1_555
136.5
X
G
26
A
OP2
G
26
1_555
Y
K
202
N
K
K
1_555
Y
U
61
B
O2'
U
13
1_555
141.2
X
G
26
A
O5'
G
26
1_555
Y
K
202
N
K
K
1_555
Y
U
61
B
O2'
U
13
1_555
98.0
Y
U
61
B
O3'
U
13
1_555
Y
K
202
N
K
K
1_555
Y
U
61
B
O2'
U
13
1_555
50.2
X
G
26
A
OP2
G
26
1_555
Y
K
202
N
K
K
1_555
Y
U
62
B
OP2
U
14
1_555
120.4
X
G
26
A
O5'
G
26
1_555
Y
K
202
N
K
K
1_555
Y
U
62
B
OP2
U
14
1_555
123.7
Y
U
61
B
O3'
U
13
1_555
Y
K
202
N
K
K
1_555
Y
U
62
B
OP2
U
14
1_555
46.7
Y
U
61
B
O2'
U
13
1_555
Y
K
202
N
K
K
1_555
Y
U
62
B
OP2
U
14
1_555
92.2
X
G
26
A
OP2
G
26
1_555
Y
K
202
N
K
K
1_555
Y
HOH
305
T
O
HOH
1_555
86.8
X
G
26
A
O5'
G
26
1_555
Y
K
202
N
K
K
1_555
Y
HOH
305
T
O
HOH
1_555
90.7
Y
U
61
B
O3'
U
13
1_555
Y
K
202
N
K
K
1_555
Y
HOH
305
T
O
HOH
1_555
104.5
Y
U
61
B
O2'
U
13
1_555
Y
K
202
N
K
K
1_555
Y
HOH
305
T
O
HOH
1_555
74.5
Y
U
62
B
OP2
U
14
1_555
Y
K
202
N
K
K
1_555
Y
HOH
305
T
O
HOH
1_555
145.0
X
G
26
A
OP2
G
26
1_555
Y
K
202
N
K
K
1_555
Y
HOH
306
T
O
HOH
1_555
71.7
X
G
26
A
O5'
G
26
1_555
Y
K
202
N
K
K
1_555
Y
HOH
306
T
O
HOH
1_555
117.4
Y
U
61
B
O3'
U
13
1_555
Y
K
202
N
K
K
1_555
Y
HOH
306
T
O
HOH
1_555
106.1
Y
U
61
B
O2'
U
13
1_555
Y
K
202
N
K
K
1_555
Y
HOH
306
T
O
HOH
1_555
128.4
Y
U
62
B
OP2
U
14
1_555
Y
K
202
N
K
K
1_555
Y
HOH
306
T
O
HOH
1_555
97.0
Y
HOH
305
T
O
HOH
1_555
Y
K
202
N
K
K
1_555
Y
HOH
306
T
O
HOH
1_555
69.2
X
HOH
203
S
O
HOH
1_555
X
K
102
H
K
K
1_555
Y
HOH
307
T
O
HOH
1_555
158.5
Y
A
84
B
OP1
A
36
1_555
Y
K
204
P
K
K
1_555
D
FRU
2
F
O6
FRU
1_555
61.0
Y
U
86
B
O4
U
38
1_555
Y
K
203
O
K
K
1_555
Y
G
87
B
O6
G
39
1_555
73.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
X
N9
A
11
A
N9
A
11
1
Y
1
X
C8
A
11
A
C8
A
11
1
Y
1
X
N7
A
11
A
N7
A
11
1
Y
1
X
C5
A
11
A
C5
A
11
1
Y
1
X
C6
A
11
A
C6
A
11
1
Y
1
X
N6
A
11
A
N6
A
11
1
Y
1
X
N1
A
11
A
N1
A
11
1
Y
1
X
C2
A
11
A
C2
A
11
1
Y
1
X
N3
A
11
A
N3
A
11
1
Y
1
X
C4
A
11
A
C4
A
11
1
Y
1
X
N1
U
13
A
N1
U
13
1
Y
1
X
C2
U
13
A
C2
U
13
1
Y
1
X
O2
U
13
A
O2
U
13
1
Y
1
X
N3
U
13
A
N3
U
13
1
Y
1
X
C4
U
13
A
C4
U
13
1
Y
1
X
O4
U
13
A
O4
U
13
1
Y
1
X
C5
U
13
A
C5
U
13
1
Y
1
X
C6
U
13
A
C6
U
13
1
Y
1
Y
N1
U
58
B
N1
U
10
1
Y
1
Y
C2
U
58
B
C2
U
10
1
Y
1
Y
O2
U
58
B
O2
U
10
1
Y
1
Y
N3
U
58
B
N3
U
10
1
Y
1
Y
C4
U
58
B
C4
U
10
1
Y
1
Y
O4
U
58
B
O4
U
10
1
Y
1
Y
C5
U
58
B
C5
U
10
1
Y
1
Y
C6
U
58
B
C6
U
10
1
Y
1
X
B
N3
O6
G
GLC
19
1
2.12
1
-5.79
0.90
105.70
99.91
X
X
X
O5'
P
OP2
G
G
G
20
20
20
N
228.400
84.5660
45.230
1.8000
0.0000
0.0000
0.0700
0.0000
-1.8700
0.9520
0.9400
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED
0.2387
0.2061
0.2076
2.8000
50.0000
453
9193
9646
4.7000
99.9300
26.8630
0.2520
RANDOM
1
THROUGHOUT
0.000
0.8790
0.3220
0.8000
0.8000
1.2000
MAXIMUM LIKELIHOOD
MASK
2.8000
50.0000
15
2068
106.36
70.97
144
1909
0
90
0.008
0.012
2277
0.003
0.020
950
1.958
1.395
3547
1.547
3.000
2321
0.099
0.200
397
0.011
0.020
1092
0.002
0.020
485
5.551
6.326
2277
0.5150
0.4470
2.8730
40
658
698
20
100.0000
2.5
93.1
4TS0
9193
1
19.0
11.9
99.0
data scaling
Aimless
refinement
REFMAC
5.8.0069
data extraction
PDB_EXTRACT
3.14
Crystal structure of the Spinach RNA aptamer in complex with DFHBI, barium ions
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
6
N
N
7
N
N
7
N
N
covale
1.588
both
X
G
43
A
O3'
G
43
1_555
X
CCC
44
A
P
CCC
44
1_555
covale
1.585
both
Y
U
94
B
O3'
U
46
1_555
Y
CCC
101
B
P
CCC
47
1_555
covale
1.433
both
A
GLC
1
C
C1
GLC
1_555
A
FRU
2
C
O2
FRU
1_555
covale
1.445
both
B
GLC
1
D
C1
GLC
1_555
B
FRU
2
D
O2
FRU
1_555
covale
1.451
both
C
GLC
1
E
C1
GLC
1_555
C
FRU
2
E
O2
FRU
1_555
covale
1.462
both
D
GLC
1
F
C1
GLC
1_555
D
FRU
2
F
O2
FRU
1_555
metalc
2.917
X
G
14
A
O2'
G
14
1_555
X
K
104
J
K
K
1_555
metalc
2.751
X
A
16
A
OP1
A
16
1_555
X
K
104
J
K
K
1_555
metalc
2.889
X
U
18
A
O4
U
18
1_555
X
K
104
J
K
K
1_555
metalc
3.076
X
G
20
A
O6
G
20
1_555
X
BA
106
L
BA
BA
1_555
metalc
3.256
X
A
23
A
OP2
A
23
1_555
X
K
103
I
K
K
1_555
metalc
3.037
X
G
25
A
O6
G
25
1_555
X
K
101
G
K
K
1_555
metalc
3.260
X
G
25
A
O3'
G
25
1_555
X
K
105
K
K
K
1_555
metalc
3.037
X
G
25
A
O2'
G
25
1_555
X
K
105
K
K
K
1_555
metalc
2.748
X
G
25
A
O6
G
25
1_555
Y
K
201
M
K
K
1_555
metalc
2.555
X
G
26
A
O6
G
26
1_555
X
K
101
G
K
K
1_555
metalc
3.048
X
G
26
A
OP2
G
26
1_555
X
K
105
K
K
K
1_555
metalc
2.877
X
G
26
A
OP2
G
26
1_555
Y
K
202
N
K
K
1_555
metalc
3.372
X
G
26
A
O5'
G
26
1_555
Y
K
202
N
K
K
1_555
metalc
3.156
X
G
29
A
O6
G
29
1_555
X
K
101
G
K
K
1_555
metalc
3.455
X
G
29
A
O6
G
29
1_555
Y
K
201
M
K
K
1_555
metalc
2.764
X
G
30
A
O6
G
30
1_555
X
K
101
G
K
K
1_555
metalc
2.862
X
K
101
G
K
K
1_555
Y
G
65
B
O6
G
17
1_555
metalc
2.645
X
K
101
G
K
K
1_555
Y
G
68
B
O6
G
20
1_555
metalc
2.729
X
K
101
G
K
K
1_555
Y
G
70
B
O6
G
22
1_555
metalc
2.930
X
K
101
G
K
K
1_555
Y
G
72
B
O6
G
24
1_555
metalc
2.053
X
K
102
H
K
K
1_555
X
HOH
203
S
O
HOH
1_555
metalc
2.450
X
K
102
H
K
K
1_555
Y
HOH
307
T
O
HOH
1_555
metalc
2.951
X
K
103
I
K
K
1_555
X
HOH
205
S
O
HOH
1_555
metalc
2.269
X
K
103
I
K
K
1_555
X
HOH
207
S
O
HOH
1_555
metalc
3.399
X
K
103
I
K
K
1_555
Y
HOH
301
T
O
HOH
1_555
metalc
2.648
X
K
103
I
K
K
1_555
Y
HOH
302
T
O
HOH
1_555
metalc
2.833
X
K
105
K
K
K
1_555
Y
HOH
304
T
O
HOH
1_555
metalc
2.647
X
K
105
K
K
K
1_555
Y
HOH
305
T
O
HOH
1_555
metalc
3.404
X
K
105
K
K
K
1_555
Y
HOH
306
T
O
HOH
1_555
metalc
2.948
X
BA
106
L
BA
BA
1_555
Y
U
78
B
O4
U
30
1_555
metalc
3.428
Y
G
56
B
O6
G
8
1_555
Y
K
205
Q
K
K
1_555
metalc
3.065
Y
U
61
B
O3'
U
13
1_555
Y
K
202
N
K
K
1_555
metalc
2.499
Y
U
61
B
O2'
U
13
1_555
Y
K
202
N
K
K
1_555
metalc
3.129
Y
U
62
B
OP2
U
14
1_555
Y
K
202
N
K
K
1_555
metalc
2.841
Y
G
68
B
O6
G
20
1_555
Y
K
201
M
K
K
1_555
metalc
3.065
Y
G
72
B
O6
G
24
1_555
Y
K
201
M
K
K
1_555
metalc
2.895
Y
U
73
B
O2'
U
25
1_555
Y
K
201
M
K
K
1_555
metalc
2.659
Y
U
73
B
O2
U
25
1_555
Y
K
201
M
K
K
1_555
metalc
3.077
Y
G
74
B
O6
G
26
1_555
Y
K
201
M
K
K
1_555
metalc
2.828
Y
A
84
B
OP1
A
36
1_555
Y
K
204
P
K
K
1_555
metalc
3.014
Y
U
86
B
O4
U
38
1_555
Y
K
203
O
K
K
1_555
metalc
3.070
Y
G
87
B
O6
G
39
1_555
Y
K
203
O
K
K
1_555
metalc
2.918
Y
K
202
N
K
K
1_555
Y
HOH
305
T
O
HOH
1_555
metalc
2.403
Y
K
202
N
K
K
1_555
Y
HOH
306
T
O
HOH
1_555
metalc
2.624
Y
K
204
P
K
K
4_465
D
FRU
2
F
O6
FRU
1_555
hydrog
WATSON-CRICK
X
G
1
A
N1
G
1
1_555
Y
CCC
101
B
N3
CCC
47
1_555
hydrog
WATSON-CRICK
X
G
1
A
N2
G
1
1_555
Y
CCC
101
B
O2
CCC
47
1_555
hydrog
WATSON-CRICK
X
G
1
A
O6
G
1
1_555
Y
CCC
101
B
N4
CCC
47
1_555
hydrog
WATSON-CRICK
X
A
2
A
N1
A
2
1_555
Y
U
94
B
N3
U
46
1_555
hydrog
WATSON-CRICK
X
A
2
A
N6
A
2
1_555
Y
U
94
B
O4
U
46
1_555
hydrog
WATSON-CRICK
X
C
3
A
N3
C
3
1_555
Y
G
93
B
N1
G
45
1_555
hydrog
WATSON-CRICK
X
C
3
A
N4
C
3
1_555
Y
G
93
B
O6
G
45
1_555
hydrog
WATSON-CRICK
X
C
3
A
O2
C
3
1_555
Y
G
93
B
N2
G
45
1_555
hydrog
WATSON-CRICK
X
G
4
A
N1
G
4
1_555
Y
C
92
B
N3
C
44
1_555
hydrog
WATSON-CRICK
X
G
4
A
N2
G
4
1_555
Y
C
92
B
O2
C
44
1_555
hydrog
WATSON-CRICK
X
G
4
A
O6
G
4
1_555
Y
C
92
B
N4
C
44
1_555
hydrog
WATSON-CRICK
X
C
5
A
N3
C
5
1_555
Y
G
91
B
N1
G
43
1_555
hydrog
WATSON-CRICK
X
C
5
A
N4
C
5
1_555
Y
G
91
B
O6
G
43
1_555
hydrog
WATSON-CRICK
X
C
5
A
O2
C
5
1_555
Y
G
91
B
N2
G
43
1_555
hydrog
WATSON-CRICK
X
G
6
A
N1
G
6
1_555
Y
C
90
B
N3
C
42
1_555
hydrog
WATSON-CRICK
X
G
6
A
N2
G
6
1_555
Y
C
90
B
O2
C
42
1_555
hydrog
WATSON-CRICK
X
G
6
A
O6
G
6
1_555
Y
C
90
B
N4
C
42
1_555
hydrog
WATSON-CRICK
X
A
7
A
N1
A
7
1_555
Y
U
89
B
N3
U
41
1_555
hydrog
WATSON-CRICK
X
A
7
A
N6
A
7
1_555
Y
U
89
B
O4
U
41
1_555
hydrog
WATSON-CRICK
X
C
8
A
N3
C
8
1_555
Y
G
88
B
N1
G
40
1_555
hydrog
WATSON-CRICK
X
C
8
A
N4
C
8
1_555
Y
G
88
B
O6
G
40
1_555
hydrog
WATSON-CRICK
X
C
8
A
O2
C
8
1_555
Y
G
88
B
N2
G
40
1_555
hydrog
WATSON-CRICK
X
C
9
A
N3
C
9
1_555
Y
G
87
B
N1
G
39
1_555
hydrog
WATSON-CRICK
X
C
9
A
N4
C
9
1_555
Y
G
87
B
O6
G
39
1_555
hydrog
WATSON-CRICK
X
C
9
A
O2
C
9
1_555
Y
G
87
B
N2
G
39
1_555
hydrog
TYPE_6_PAIR
X
G
10
A
N1
G
10
1_555
X
G
14
A
O6
G
14
1_555
hydrog
TYPE_6_PAIR
X
G
10
A
N2
G
10
1_555
X
G
14
A
N7
G
14
1_555
hydrog
G-C PAIR
X
G
10
A
O6
G
10
1_555
Y
C
85
B
N4
C
37
1_555
hydrog
WATSON-CRICK
X
A
12
A
N1
A
12
1_555
Y
U
86
B
N3
U
38
1_555
hydrog
WATSON-CRICK
X
A
12
A
N6
A
12
1_555
Y
U
86
B
O4
U
38
1_555
hydrog
WATSON-CRICK
X
G
14
A
N1
G
14
1_555
Y
C
85
B
N3
C
37
1_555
hydrog
WATSON-CRICK
X
G
14
A
N2
G
14
1_555
Y
C
85
B
O2
C
37
1_555
hydrog
WATSON-CRICK
X
G
14
A
O6
G
14
1_555
Y
C
85
B
N4
C
37
1_555
hydrog
WATSON-CRICK
X
A
17
A
N1
A
17
1_555
Y
U
82
B
N3
U
34
1_555
hydrog
WATSON-CRICK
X
A
17
A
N6
A
17
1_555
Y
U
82
B
O4
U
34
1_555
hydrog
A-A MISPAIR
X
A
17
A
N3
A
17
1_555
Y
A
84
B
N6
A
36
1_555
hydrog
U-G MISPAIR
X
U
18
A
O2
U
18
1_555
Y
G
81
B
N1
G
33
1_555
hydrog
WATSON-CRICK
X
G
19
A
N1
G
19
1_555
Y
C
80
B
N3
C
32
1_555
hydrog
WATSON-CRICK
X
G
19
A
N2
G
19
1_555
Y
C
80
B
O2
C
32
1_555
hydrog
WATSON-CRICK
X
G
19
A
O6
G
19
1_555
Y
C
80
B
N4
C
32
1_555
hydrog
WATSON-CRICK
X
G
20
A
N1
G
20
1_555
Y
C
79
B
N3
C
31
1_555
hydrog
WATSON-CRICK
X
G
20
A
N2
G
20
1_555
Y
C
79
B
O2
C
31
1_555
hydrog
WATSON-CRICK
X
G
20
A
O6
G
20
1_555
Y
C
79
B
N4
C
31
1_555
hydrog
TYPE_16_PAIR
X
U
21
A
N3
U
21
1_555
Y
U
78
B
O2
U
30
1_555
hydrog
TYPE_16_PAIR
X
U
21
A
O4
U
21
1_555
Y
U
78
B
N3
U
30
1_555
hydrog
WATSON-CRICK
X
G
22
A
N1
G
22
1_555
Y
C
77
B
N3
C
29
1_555
hydrog
WATSON-CRICK
X
G
22
A
N2
G
22
1_555
Y
C
77
B
O2
C
29
1_555
hydrog
WATSON-CRICK
X
G
22
A
O6
G
22
1_555
Y
C
77
B
N4
C
29
1_555
hydrog
TYPE_8_PAIR
X
A
23
A
N1
A
23
1_555
Y
G
76
B
N1
G
28
1_555
hydrog
TYPE_8_PAIR
X
A
23
A
N6
A
23
1_555
Y
G
76
B
O6
G
28
1_555
hydrog
A-A MISPAIR
X
A
24
A
N1
A
24
1_555
Y
A
75
B
N6
A
27
1_555
hydrog
TYPE_6_PAIR
X
G
25
A
N1
G
25
1_555
X
G
29
A
O6
G
29
1_555
hydrog
TYPE_6_PAIR
X
G
25
A
N2
G
25
1_555
X
G
29
A
N7
G
29
1_555
hydrog
TYPE_6_PAIR
X
G
25
A
N7
G
25
1_555
Y
G
68
B
N2
G
20
1_555
hydrog
TYPE_6_PAIR
X
G
25
A
O6
G
25
1_555
Y
G
68
B
N1
G
20
1_555
hydrog
TYPE_6_PAIR
X
G
26
A
N1
G
26
1_555
X
G
30
A
O6
G
30
1_555
hydrog
TYPE_6_PAIR
X
G
26
A
N2
G
26
1_555
X
G
30
A
N7
G
30
1_555
hydrog
TYPE_6_PAIR
X
G
26
A
N7
G
26
1_555
Y
G
65
B
N2
G
17
1_555
hydrog
TYPE_6_PAIR
X
G
26
A
O6
G
26
1_555
Y
G
65
B
N1
G
17
1_555
hydrog
C-U MISPAIR
X
C
28
A
N4
C
28
1_555
Y
U
66
B
O4
U
18
1_555
hydrog
WATSON-CRICK
X
C
28
A
N3
C
28
1_555
Y
G
74
B
N1
G
26
1_555
hydrog
WATSON-CRICK
X
C
28
A
N4
C
28
1_555
Y
G
74
B
O6
G
26
1_555
hydrog
WATSON-CRICK
X
C
28
A
O2
C
28
1_555
Y
G
74
B
N2
G
26
1_555
hydrog
TYPE_6_PAIR
X
G
29
A
N1
G
29
1_555
Y
G
72
B
O6
G
24
1_555
hydrog
TYPE_6_PAIR
X
G
29
A
N2
G
29
1_555
Y
G
72
B
N7
G
24
1_555
hydrog
TYPE_6_PAIR
X
G
30
A
N1
G
30
1_555
Y
G
70
B
O6
G
22
1_555
hydrog
TYPE_6_PAIR
X
G
30
A
N2
G
30
1_555
Y
G
70
B
N7
G
22
1_555
hydrog
WATSON-CRICK
X
U
32
A
N3
U
32
1_555
Y
A
64
B
N1
A
16
1_555
hydrog
WATSON-CRICK
X
U
32
A
O4
U
32
1_555
Y
A
64
B
N6
A
16
1_555
hydrog
WATSON-CRICK
X
C
33
A
N3
C
33
1_555
Y
G
63
B
N1
G
15
1_555
hydrog
WATSON-CRICK
X
C
33
A
N4
C
33
1_555
Y
G
63
B
O6
G
15
1_555
hydrog
WATSON-CRICK
X
C
33
A
O2
C
33
1_555
Y
G
63
B
N2
G
15
1_555
hydrog
WATSON-CRICK
X
C
34
A
N3
C
34
1_555
Y
G
60
B
N1
G
12
1_555
hydrog
WATSON-CRICK
X
C
34
A
N4
C
34
1_555
Y
G
60
B
O6
G
12
1_555
hydrog
WATSON-CRICK
X
C
34
A
O2
C
34
1_555
Y
G
60
B
N2
G
12
1_555
hydrog
WATSON-CRICK
X
A
35
A
N1
A
35
1_555
Y
U
59
B
N3
U
11
1_555
hydrog
WATSON-CRICK
X
A
35
A
N6
A
35
1_555
Y
U
59
B
O4
U
11
1_555
hydrog
WATSON-CRICK
X
G
36
A
N1
G
36
1_555
Y
C
57
B
N3
C
9
1_555
hydrog
WATSON-CRICK
X
G
36
A
N2
G
36
1_555
Y
C
57
B
O2
C
9
1_555
hydrog
WATSON-CRICK
X
G
36
A
O6
G
36
1_555
Y
C
57
B
N4
C
9
1_555
hydrog
WATSON-CRICK
X
C
37
A
N3
C
37
1_555
Y
G
56
B
N1
G
8
1_555
hydrog
WATSON-CRICK
X
C
37
A
N4
C
37
1_555
Y
G
56
B
O6
G
8
1_555
hydrog
WATSON-CRICK
X
C
37
A
O2
C
37
1_555
Y
G
56
B
N2
G
8
1_555
hydrog
WATSON-CRICK
X
C
38
A
N3
C
38
1_555
Y
G
55
B
N1
G
7
1_555
hydrog
WATSON-CRICK
X
C
38
A
N4
C
38
1_555
Y
G
55
B
O6
G
7
1_555
hydrog
WATSON-CRICK
X
C
38
A
O2
C
38
1_555
Y
G
55
B
N2
G
7
1_555
hydrog
WATSON-CRICK
X
G
39
A
N1
G
39
1_555
Y
C
54
B
N3
C
6
1_555
hydrog
WATSON-CRICK
X
G
39
A
N2
G
39
1_555
Y
C
54
B
O2
C
6
1_555
hydrog
WATSON-CRICK
X
G
39
A
O6
G
39
1_555
Y
C
54
B
N4
C
6
1_555
hydrog
WATSON-CRICK
X
G
40
A
N1
G
40
1_555
Y
C
53
B
N3
C
5
1_555
hydrog
WATSON-CRICK
X
G
40
A
N2
G
40
1_555
Y
C
53
B
O2
C
5
1_555
hydrog
WATSON-CRICK
X
G
40
A
O6
G
40
1_555
Y
C
53
B
N4
C
5
1_555
hydrog
WATSON-CRICK
X
C
41
A
N3
C
41
1_555
Y
G
52
B
N1
G
4
1_555
hydrog
WATSON-CRICK
X
C
41
A
N4
C
41
1_555
Y
G
52
B
O6
G
4
1_555
hydrog
WATSON-CRICK
X
C
41
A
O2
C
41
1_555
Y
G
52
B
N2
G
4
1_555
hydrog
WATSON-CRICK
X
U
42
A
N3
U
42
1_555
Y
A
51
B
N1
A
3
1_555
hydrog
WATSON-CRICK
X
U
42
A
O4
U
42
1_555
Y
A
51
B
N6
A
3
1_555
hydrog
WATSON-CRICK
X
G
43
A
N1
G
43
1_555
Y
C
50
B
N3
C
2
1_555
hydrog
WATSON-CRICK
X
G
43
A
N2
G
43
1_555
Y
C
50
B
O2
C
2
1_555
hydrog
WATSON-CRICK
X
G
43
A
O6
G
43
1_555
Y
C
50
B
N4
C
2
1_555
hydrog
WATSON-CRICK
X
CCC
44
A
N3
CCC
44
1_555
Y
G
49
B
N1
G
1
1_555
hydrog
WATSON-CRICK
X
CCC
44
A
N4
CCC
44
1_555
Y
G
49
B
O6
G
1
1_555
hydrog
WATSON-CRICK
X
CCC
44
A
O2
CCC
44
1_555
Y
G
49
B
N2
G
1
1_555
hydrog
HOOGSTEEN
Y
U
61
B
N3
U
13
1_555
Y
A
64
B
N7
A
16
1_555
hydrog
HOOGSTEEN
Y
U
61
B
O4
U
13
1_555
Y
A
64
B
N6
A
16
1_555
hydrog
TYPE_6_PAIR
Y
G
65
B
N7
G
17
1_555
Y
G
70
B
N2
G
22
1_555
hydrog
TYPE_6_PAIR
Y
G
65
B
O6
G
17
1_555
Y
G
70
B
N1
G
22
1_555
hydrog
U-U MISPAIR
Y
U
66
B
O2
U
18
1_555
Y
U
73
B
N3
U
25
1_555
hydrog
TYPE_6_PAIR
Y
G
68
B
N7
G
20
1_555
Y
G
72
B
N2
G
24
1_555
hydrog
TYPE_6_PAIR
Y
G
68
B
O6
G
20
1_555
Y
G
72
B
N1
G
24
1_555
RNA
aptamer, fluorescence, G-quadruplex, RNA
4TS0
PDB
1
1
4TS0
4TS0
PDB
2
1
4TS0
1
44
4TS0
1
44
4TS0
X
1
1
44
49
101
4TS0
49
101
4TS0
Y
2
1
47
19
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