0.010090
0.000000
0.000663
0.000000
0.016943
0.000000
0.000000
0.000000
0.016214
0.00000
0.00000
0.00000
Jasti, J.
Song, X.
Griffor, M.
Kurumbail, R.G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
93.76
90.00
99.110
59.020
61.810
C17 H15 N5 O
305.334
3-[4-(morpholin-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mn 2
54.938
MANGANESE (II) ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C4 H10 N O6 P
199.099
n
PHOSPHOTHREONINE
PHOSPHONOTHREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
N
Y
2
N
C
Y
3
N
N
Y
4
N
C
Y
5
N
C
Y
6
N
C
N
7
N
C
Y
8
N
C
N
9
N
N
N
10
N
C
Y
11
N
C
Y
12
N
C
Y
13
N
C
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
Y
18
N
C
N
19
N
N
N
20
N
C
N
21
N
O
N
22
N
C
N
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
N
N
40
S
C
N
41
N
C
N
42
N
O
N
43
N
C
N
44
N
O
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
N
N
53
S
C
N
54
N
C
N
55
N
O
N
56
N
C
N
57
N
C
N
58
N
C
N
59
N
N
N
60
N
C
N
61
N
N
N
62
N
N
N
63
N
O
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
N
N
80
S
C
N
81
N
C
N
82
N
O
N
83
N
C
N
84
N
C
N
85
N
O
N
86
N
N
N
87
N
O
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
N
N
97
S
C
N
98
N
C
N
99
N
O
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
O
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
N
N
113
R
C
N
114
N
C
N
115
N
O
N
116
N
C
N
117
N
S
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
N
N
127
S
C
N
128
N
C
N
129
N
O
N
130
N
C
N
131
N
C
N
132
N
C
N
133
N
O
N
134
N
N
N
135
N
O
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
N
N
147
S
C
N
148
N
C
N
149
N
O
N
150
N
C
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
O
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
N
N
166
N
C
N
167
N
C
N
168
N
O
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
N
C
Y
180
N
C
Y
181
N
N
Y
182
N
C
Y
183
N
C
Y
184
N
N
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
N
N
200
S
C
N
201
N
C
N
202
N
O
N
203
S
C
N
204
N
C
N
205
N
C
N
206
N
C
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
N
N
222
S
C
N
223
N
C
N
224
N
O
N
225
N
C
N
226
N
C
N
227
N
C
N
228
N
C
N
229
N
O
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
N
N
244
S
C
N
245
N
C
N
246
N
O
N
247
N
C
N
248
N
C
N
249
N
C
N
250
N
C
N
251
N
N
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
N
N
269
S
C
N
270
N
C
N
271
N
O
N
272
N
C
N
273
N
C
N
274
N
S
N
275
N
C
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
MN
N
289
N
N
N
290
S
C
N
291
N
C
N
292
N
O
N
293
N
C
Y
294
N
C
Y
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
N
N
313
S
C
N
314
N
C
N
315
N
O
N
316
N
C
N
317
N
C
N
318
N
C
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
N
N
330
S
C
N
331
N
C
N
332
N
O
N
333
N
C
N
334
N
O
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
N
N
344
S
C
N
345
N
C
N
346
N
O
N
347
R
C
N
348
N
O
N
349
N
C
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
N
N
361
S
C
N
362
R
C
N
363
N
C
N
364
N
O
N
365
N
P
N
366
N
O
N
367
N
O
N
368
N
O
N
369
N
C
N
370
N
O
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
S
C
N
384
N
C
N
385
N
O
N
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
N
Y
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
N
396
N
O
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
N
N
410
S
C
N
411
N
C
N
412
N
O
N
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
N
420
N
O
N
421
N
O
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
N
N
434
S
C
N
435
N
C
N
436
N
O
N
437
N
C
N
438
N
C
N
439
N
C
N
440
N
O
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
1
N
trip
N
2
N
sing
Y
3
N
doub
Y
4
N
sing
Y
5
N
sing
Y
6
N
doub
Y
7
N
doub
N
8
N
sing
N
9
N
sing
Y
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
Y
14
N
doub
Y
15
N
sing
Y
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
Y
20
N
doub
Y
21
N
sing
Y
22
N
sing
Y
23
N
sing
Y
24
N
doub
Y
25
N
doub
Y
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
doub
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
doub
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
doub
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
doub
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
doub
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
doub
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
doub
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
Y
181
N
sing
Y
182
N
doub
Y
183
N
doub
N
184
N
sing
Y
185
N
sing
N
186
N
sing
Y
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
Y
289
N
doub
Y
290
N
sing
Y
291
N
sing
N
292
N
sing
Y
293
N
doub
N
294
N
sing
Y
295
N
doub
N
296
N
sing
Y
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
doub
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
Y
379
N
doub
Y
380
N
sing
Y
381
N
sing
N
382
N
sing
Y
383
N
doub
Y
384
N
sing
Y
385
N
sing
N
386
N
sing
Y
387
N
sing
Y
388
N
doub
N
389
N
sing
Y
390
N
doub
N
391
N
sing
Y
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
doub
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
Y
407
N
doub
Y
408
N
sing
Y
409
N
sing
N
410
N
sing
Y
411
N
doub
N
412
N
sing
Y
413
N
doub
N
414
N
sing
Y
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
doub
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
58
419
432
10.1021/jm5014055
25353650
Discovery and preclinical profiling of 3-[4-(morpholin-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile (PF-06447475), a highly potent, selective, brain penetrant, and in vivo active LRRK2 kinase inhibitor.
2015
10.2210/pdb4u8z/pdb
pdb_00004u8z
100
1
PIXEL
2012-06-27
PSI PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
17-ID
APS
1.0
SYNCHROTRON
APS BEAMLINE 17-ID
32954.770
Serine/threonine-protein kinase 24
2.7.11.1
UNP residues 9-298
1
man
polymer
54.938
MANGANESE (II) ION
1
syn
non-polymer
305.334
3-[4-(morpholin-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile
1
syn
non-polymer
18.015
water
262
nat
water
Mammalian STE20-like protein kinase 3,MST-3,STE20-like kinase MST3
no
yes
GLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS
YLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ
LTDTQIKRN(TPO)FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYS
KPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQ
GLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS
YLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ
LTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLK
EFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
290
STK24, MST3, STK3
9606
Homo sapiens
562
Escherichia coli
Biological sequence
1
2.74
55.06
VAPOR DIFFUSION, SITTING DROP
8.5
0.1M Tris-HCl (pH 8.5), 180mM MgCl2, 5mM Manganese (II) acetate, 10-17% PEG3350
293
chem_comp_atom
chem_comp_bond
citation
database_2
entity_src_gen
pdbx_database_status
pdbx_initial_refinement_model
pdbx_struct_conn_angle
pdbx_struct_oper_list
refine_hist
struct_conn
struct_conn_type
repository
Initial release
Data collection
Database references
Derived calculations
Other
Refinement description
Source and taxonomy
1
0
2015-03-18
1
1
2023-09-27
_citation.journal_id_CSD
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_entity_src_gen.pdbx_alt_source_flag
_pdbx_database_status.pdb_format_compatible
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.value
_pdbx_struct_oper_list.symmetry_operation
_refine_hist.number_atoms_solvent
_refine_hist.number_atoms_total
_refine_hist.pdbx_number_atoms_ligand
_refine_hist.pdbx_number_atoms_nucleic_acid
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn_type.id
N
RCSB
Y
RCSB
2014-08-05
REL
REL
MN
MANGANESE (II) ION
3FE
3-[4-(morpholin-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile
HOH
water
3A7J
PDB
experimental model
MN
400
2
MN
MN
301
A
PFE
500
3
3FE
3FE
302
A
HOH
253
4
HOH
HOH
401
A
HOH
227
4
HOH
HOH
402
A
HOH
233
4
HOH
HOH
403
A
HOH
210
4
HOH
HOH
404
A
HOH
158
4
HOH
HOH
405
A
HOH
230
4
HOH
HOH
406
A
HOH
67
4
HOH
HOH
407
A
HOH
68
4
HOH
HOH
408
A
HOH
62
4
HOH
HOH
409
A
HOH
195
4
HOH
HOH
410
A
HOH
171
4
HOH
HOH
411
A
HOH
25
4
HOH
HOH
412
A
HOH
199
4
HOH
HOH
413
A
HOH
141
4
HOH
HOH
414
A
HOH
149
4
HOH
HOH
415
A
HOH
200
4
HOH
HOH
416
A
HOH
16
4
HOH
HOH
417
A
HOH
144
4
HOH
HOH
418
A
HOH
137
4
HOH
HOH
419
A
HOH
75
4
HOH
HOH
420
A
HOH
18
4
HOH
HOH
421
A
HOH
196
4
HOH
HOH
422
A
HOH
206
4
HOH
HOH
423
A
HOH
170
4
HOH
HOH
424
A
HOH
110
4
HOH
HOH
425
A
HOH
172
4
HOH
HOH
426
A
HOH
162
4
HOH
HOH
427
A
HOH
69
4
HOH
HOH
428
A
HOH
152
4
HOH
HOH
429
A
HOH
258
4
HOH
HOH
430
A
HOH
40
4
HOH
HOH
431
A
HOH
43
4
HOH
HOH
432
A
HOH
84
4
HOH
HOH
433
A
HOH
20
4
HOH
HOH
434
A
HOH
90
4
HOH
HOH
435
A
HOH
177
4
HOH
HOH
436
A
HOH
15
4
HOH
HOH
437
A
HOH
42
4
HOH
HOH
438
A
HOH
131
4
HOH
HOH
439
A
HOH
208
4
HOH
HOH
440
A
HOH
63
4
HOH
HOH
441
A
HOH
19
4
HOH
HOH
442
A
HOH
23
4
HOH
HOH
443
A
HOH
113
4
HOH
HOH
444
A
HOH
143
4
HOH
HOH
445
A
HOH
97
4
HOH
HOH
446
A
HOH
181
4
HOH
HOH
447
A
HOH
50
4
HOH
HOH
448
A
HOH
160
4
HOH
HOH
449
A
HOH
22
4
HOH
HOH
450
A
HOH
44
4
HOH
HOH
451
A
HOH
14
4
HOH
HOH
452
A
HOH
47
4
HOH
HOH
453
A
HOH
1
4
HOH
HOH
454
A
HOH
189
4
HOH
HOH
455
A
HOH
111
4
HOH
HOH
456
A
HOH
197
4
HOH
HOH
457
A
HOH
96
4
HOH
HOH
458
A
HOH
198
4
HOH
HOH
459
A
HOH
55
4
HOH
HOH
460
A
HOH
193
4
HOH
HOH
461
A
HOH
2
4
HOH
HOH
462
A
HOH
203
4
HOH
HOH
463
A
HOH
185
4
HOH
HOH
464
A
HOH
194
4
HOH
HOH
465
A
HOH
186
4
HOH
HOH
466
A
HOH
104
4
HOH
HOH
467
A
HOH
167
4
HOH
HOH
468
A
HOH
179
4
HOH
HOH
469
A
HOH
73
4
HOH
HOH
470
A
HOH
151
4
HOH
HOH
471
A
HOH
259
4
HOH
HOH
472
A
HOH
217
4
HOH
HOH
473
A
HOH
232
4
HOH
HOH
474
A
HOH
78
4
HOH
HOH
475
A
HOH
165
4
HOH
HOH
476
A
HOH
122
4
HOH
HOH
477
A
HOH
103
4
HOH
HOH
478
A
HOH
190
4
HOH
HOH
479
A
HOH
95
4
HOH
HOH
480
A
HOH
229
4
HOH
HOH
481
A
HOH
129
4
HOH
HOH
482
A
HOH
81
4
HOH
HOH
483
A
HOH
128
4
HOH
HOH
484
A
HOH
231
4
HOH
HOH
485
A
HOH
107
4
HOH
HOH
486
A
HOH
261
4
HOH
HOH
487
A
HOH
225
4
HOH
HOH
488
A
HOH
3
4
HOH
HOH
489
A
HOH
4
4
HOH
HOH
490
A
HOH
5
4
HOH
HOH
491
A
HOH
6
4
HOH
HOH
492
A
HOH
7
4
HOH
HOH
493
A
HOH
8
4
HOH
HOH
494
A
HOH
9
4
HOH
HOH
495
A
HOH
10
4
HOH
HOH
496
A
HOH
11
4
HOH
HOH
497
A
HOH
12
4
HOH
HOH
498
A
HOH
13
4
HOH
HOH
499
A
HOH
17
4
HOH
HOH
500
A
HOH
21
4
HOH
HOH
501
A
HOH
24
4
HOH
HOH
502
A
HOH
26
4
HOH
HOH
503
A
HOH
27
4
HOH
HOH
504
A
HOH
28
4
HOH
HOH
505
A
HOH
29
4
HOH
HOH
506
A
HOH
30
4
HOH
HOH
507
A
HOH
31
4
HOH
HOH
508
A
HOH
32
4
HOH
HOH
509
A
HOH
33
4
HOH
HOH
510
A
HOH
34
4
HOH
HOH
511
A
HOH
35
4
HOH
HOH
512
A
HOH
36
4
HOH
HOH
513
A
HOH
37
4
HOH
HOH
514
A
HOH
38
4
HOH
HOH
515
A
HOH
39
4
HOH
HOH
516
A
HOH
41
4
HOH
HOH
517
A
HOH
45
4
HOH
HOH
518
A
HOH
46
4
HOH
HOH
519
A
HOH
48
4
HOH
HOH
520
A
HOH
49
4
HOH
HOH
521
A
HOH
51
4
HOH
HOH
522
A
HOH
52
4
HOH
HOH
523
A
HOH
53
4
HOH
HOH
524
A
HOH
54
4
HOH
HOH
525
A
HOH
56
4
HOH
HOH
526
A
HOH
57
4
HOH
HOH
527
A
HOH
58
4
HOH
HOH
528
A
HOH
59
4
HOH
HOH
529
A
HOH
60
4
HOH
HOH
530
A
HOH
61
4
HOH
HOH
531
A
HOH
64
4
HOH
HOH
532
A
HOH
65
4
HOH
HOH
533
A
HOH
66
4
HOH
HOH
534
A
HOH
70
4
HOH
HOH
535
A
HOH
71
4
HOH
HOH
536
A
HOH
72
4
HOH
HOH
537
A
HOH
74
4
HOH
HOH
538
A
HOH
76
4
HOH
HOH
539
A
HOH
77
4
HOH
HOH
540
A
HOH
79
4
HOH
HOH
541
A
HOH
80
4
HOH
HOH
542
A
HOH
82
4
HOH
HOH
543
A
HOH
83
4
HOH
HOH
544
A
HOH
85
4
HOH
HOH
545
A
HOH
86
4
HOH
HOH
546
A
HOH
87
4
HOH
HOH
547
A
HOH
88
4
HOH
HOH
548
A
HOH
89
4
HOH
HOH
549
A
HOH
91
4
HOH
HOH
550
A
HOH
92
4
HOH
HOH
551
A
HOH
93
4
HOH
HOH
552
A
HOH
94
4
HOH
HOH
553
A
HOH
98
4
HOH
HOH
554
A
HOH
99
4
HOH
HOH
555
A
HOH
100
4
HOH
HOH
556
A
HOH
101
4
HOH
HOH
557
A
HOH
102
4
HOH
HOH
558
A
HOH
105
4
HOH
HOH
559
A
HOH
106
4
HOH
HOH
560
A
HOH
108
4
HOH
HOH
561
A
HOH
109
4
HOH
HOH
562
A
HOH
112
4
HOH
HOH
563
A
HOH
114
4
HOH
HOH
564
A
HOH
115
4
HOH
HOH
565
A
HOH
116
4
HOH
HOH
566
A
HOH
117
4
HOH
HOH
567
A
HOH
118
4
HOH
HOH
568
A
HOH
119
4
HOH
HOH
569
A
HOH
120
4
HOH
HOH
570
A
HOH
121
4
HOH
HOH
571
A
HOH
123
4
HOH
HOH
572
A
HOH
124
4
HOH
HOH
573
A
HOH
125
4
HOH
HOH
574
A
HOH
126
4
HOH
HOH
575
A
HOH
127
4
HOH
HOH
576
A
HOH
130
4
HOH
HOH
577
A
HOH
132
4
HOH
HOH
578
A
HOH
133
4
HOH
HOH
579
A
HOH
134
4
HOH
HOH
580
A
HOH
135
4
HOH
HOH
581
A
HOH
136
4
HOH
HOH
582
A
HOH
138
4
HOH
HOH
583
A
HOH
139
4
HOH
HOH
584
A
HOH
140
4
HOH
HOH
585
A
HOH
142
4
HOH
HOH
586
A
HOH
145
4
HOH
HOH
587
A
HOH
146
4
HOH
HOH
588
A
HOH
147
4
HOH
HOH
589
A
HOH
148
4
HOH
HOH
590
A
HOH
150
4
HOH
HOH
591
A
HOH
153
4
HOH
HOH
592
A
HOH
154
4
HOH
HOH
593
A
HOH
155
4
HOH
HOH
594
A
HOH
156
4
HOH
HOH
595
A
HOH
157
4
HOH
HOH
596
A
HOH
159
4
HOH
HOH
597
A
HOH
161
4
HOH
HOH
598
A
HOH
163
4
HOH
HOH
599
A
HOH
164
4
HOH
HOH
600
A
HOH
166
4
HOH
HOH
601
A
HOH
168
4
HOH
HOH
602
A
HOH
169
4
HOH
HOH
603
A
HOH
173
4
HOH
HOH
604
A
HOH
174
4
HOH
HOH
605
A
HOH
175
4
HOH
HOH
606
A
HOH
176
4
HOH
HOH
607
A
HOH
178
4
HOH
HOH
608
A
HOH
180
4
HOH
HOH
609
A
HOH
182
4
HOH
HOH
610
A
HOH
183
4
HOH
HOH
611
A
HOH
184
4
HOH
HOH
612
A
HOH
187
4
HOH
HOH
613
A
HOH
188
4
HOH
HOH
614
A
HOH
191
4
HOH
HOH
615
A
HOH
192
4
HOH
HOH
616
A
HOH
201
4
HOH
HOH
617
A
HOH
202
4
HOH
HOH
618
A
HOH
204
4
HOH
HOH
619
A
HOH
205
4
HOH
HOH
620
A
HOH
207
4
HOH
HOH
621
A
HOH
209
4
HOH
HOH
622
A
HOH
211
4
HOH
HOH
623
A
HOH
212
4
HOH
HOH
624
A
HOH
213
4
HOH
HOH
625
A
HOH
214
4
HOH
HOH
626
A
HOH
215
4
HOH
HOH
627
A
HOH
216
4
HOH
HOH
628
A
HOH
218
4
HOH
HOH
629
A
HOH
219
4
HOH
HOH
630
A
HOH
220
4
HOH
HOH
631
A
HOH
221
4
HOH
HOH
632
A
HOH
222
4
HOH
HOH
633
A
HOH
223
4
HOH
HOH
634
A
HOH
224
4
HOH
HOH
635
A
HOH
226
4
HOH
HOH
636
A
HOH
228
4
HOH
HOH
637
A
HOH
234
4
HOH
HOH
638
A
HOH
235
4
HOH
HOH
639
A
HOH
236
4
HOH
HOH
640
A
HOH
237
4
HOH
HOH
641
A
HOH
238
4
HOH
HOH
642
A
HOH
239
4
HOH
HOH
643
A
HOH
240
4
HOH
HOH
644
A
HOH
241
4
HOH
HOH
645
A
HOH
242
4
HOH
HOH
646
A
HOH
243
4
HOH
HOH
647
A
HOH
244
4
HOH
HOH
648
A
HOH
245
4
HOH
HOH
649
A
HOH
246
4
HOH
HOH
650
A
HOH
247
4
HOH
HOH
651
A
HOH
248
4
HOH
HOH
652
A
HOH
249
4
HOH
HOH
653
A
HOH
250
4
HOH
HOH
654
A
HOH
251
4
HOH
HOH
655
A
HOH
252
4
HOH
HOH
656
A
HOH
254
4
HOH
HOH
657
A
HOH
255
4
HOH
HOH
658
A
HOH
256
4
HOH
HOH
659
A
HOH
257
4
HOH
HOH
660
A
HOH
260
4
HOH
HOH
661
A
HOH
262
4
HOH
HOH
662
A
GLY
9
n
1
GLY
9
A
LEU
10
n
2
LEU
10
A
PRO
11
n
3
PRO
11
A
GLY
12
n
4
GLY
12
A
MET
13
n
5
MET
13
A
GLN
14
n
6
GLN
14
A
ASN
15
n
7
ASN
15
A
LEU
16
n
8
LEU
16
A
LYS
17
n
9
LYS
17
A
ALA
18
n
10
ALA
18
A
ASP
19
n
11
ASP
19
A
PRO
20
n
12
PRO
20
A
GLU
21
n
13
GLU
21
A
GLU
22
n
14
GLU
22
A
LEU
23
n
15
LEU
23
A
PHE
24
n
16
PHE
24
A
THR
25
n
17
THR
25
A
LYS
26
n
18
LYS
26
A
LEU
27
n
19
LEU
27
A
GLU
28
n
20
GLU
28
A
LYS
29
n
21
LYS
29
A
ILE
30
n
22
ILE
30
A
GLY
31
n
23
GLY
31
A
LYS
32
n
24
LYS
32
A
GLY
33
n
25
GLY
33
A
SER
34
n
26
SER
34
A
PHE
35
n
27
PHE
35
A
GLY
36
n
28
GLY
36
A
GLU
37
n
29
GLU
37
A
VAL
38
n
30
VAL
38
A
PHE
39
n
31
PHE
39
A
LYS
40
n
32
LYS
40
A
GLY
41
n
33
GLY
41
A
ILE
42
n
34
ILE
42
A
ASP
43
n
35
ASP
43
A
ASN
44
n
36
ASN
44
A
ARG
45
n
37
ARG
45
A
THR
46
n
38
THR
46
A
GLN
47
n
39
GLN
47
A
LYS
48
n
40
LYS
48
A
VAL
49
n
41
VAL
49
A
VAL
50
n
42
VAL
50
A
ALA
51
n
43
ALA
51
A
ILE
52
n
44
ILE
52
A
LYS
53
n
45
LYS
53
A
ILE
54
n
46
ILE
54
A
ILE
55
n
47
ILE
55
A
ASP
56
n
48
ASP
56
A
LEU
57
n
49
LEU
57
A
GLU
58
n
50
GLU
58
A
GLU
59
n
51
GLU
59
A
ALA
60
n
52
ALA
60
A
GLU
61
n
53
GLU
61
A
ASP
62
n
54
ASP
62
A
GLU
63
n
55
GLU
63
A
ILE
64
n
56
ILE
64
A
GLU
65
n
57
GLU
65
A
ASP
66
n
58
ASP
66
A
ILE
67
n
59
ILE
67
A
GLN
68
n
60
GLN
68
A
GLN
69
n
61
GLN
69
A
GLU
70
n
62
GLU
70
A
ILE
71
n
63
ILE
71
A
THR
72
n
64
THR
72
A
VAL
73
n
65
VAL
73
A
LEU
74
n
66
LEU
74
A
SER
75
n
67
SER
75
A
GLN
76
n
68
GLN
76
A
CYS
77
n
69
CYS
77
A
ASP
78
n
70
ASP
78
A
SER
79
n
71
SER
79
A
PRO
80
n
72
PRO
80
A
TYR
81
n
73
TYR
81
A
VAL
82
n
74
VAL
82
A
THR
83
n
75
THR
83
A
LYS
84
n
76
LYS
84
A
TYR
85
n
77
TYR
85
A
TYR
86
n
78
TYR
86
A
GLY
87
n
79
GLY
87
A
SER
88
n
80
SER
88
A
TYR
89
n
81
TYR
89
A
LEU
90
n
82
LEU
90
A
LYS
91
n
83
LYS
91
A
ASP
92
n
84
ASP
92
A
THR
93
n
85
THR
93
A
LYS
94
n
86
LYS
94
A
LEU
95
n
87
LEU
95
A
TRP
96
n
88
TRP
96
A
ILE
97
n
89
ILE
97
A
ILE
98
n
90
ILE
98
A
MET
99
n
91
MET
99
A
GLU
100
n
92
GLU
100
A
TYR
101
n
93
TYR
101
A
LEU
102
n
94
LEU
102
A
GLY
103
n
95
GLY
103
A
GLY
104
n
96
GLY
104
A
GLY
105
n
97
GLY
105
A
SER
106
n
98
SER
106
A
ALA
107
n
99
ALA
107
A
LEU
108
n
100
LEU
108
A
ASP
109
n
101
ASP
109
A
LEU
110
n
102
LEU
110
A
LEU
111
n
103
LEU
111
A
GLU
112
n
104
GLU
112
A
PRO
113
n
105
PRO
113
A
GLY
114
n
106
GLY
114
A
PRO
115
n
107
PRO
115
A
LEU
116
n
108
LEU
116
A
ASP
117
n
109
ASP
117
A
GLU
118
n
110
GLU
118
A
THR
119
n
111
THR
119
A
GLN
120
n
112
GLN
120
A
ILE
121
n
113
ILE
121
A
ALA
122
n
114
ALA
122
A
THR
123
n
115
THR
123
A
ILE
124
n
116
ILE
124
A
LEU
125
n
117
LEU
125
A
ARG
126
n
118
ARG
126
A
GLU
127
n
119
GLU
127
A
ILE
128
n
120
ILE
128
A
LEU
129
n
121
LEU
129
A
LYS
130
n
122
LYS
130
A
GLY
131
n
123
GLY
131
A
LEU
132
n
124
LEU
132
A
ASP
133
n
125
ASP
133
A
TYR
134
n
126
TYR
134
A
LEU
135
n
127
LEU
135
A
HIS
136
n
128
HIS
136
A
SER
137
n
129
SER
137
A
GLU
138
n
130
GLU
138
A
LYS
139
n
131
LYS
139
A
LYS
140
n
132
LYS
140
A
ILE
141
n
133
ILE
141
A
HIS
142
n
134
HIS
142
A
ARG
143
n
135
ARG
143
A
ASP
144
n
136
ASP
144
A
ILE
145
n
137
ILE
145
A
LYS
146
n
138
LYS
146
A
ALA
147
n
139
ALA
147
A
ALA
148
n
140
ALA
148
A
ASN
149
n
141
ASN
149
A
VAL
150
n
142
VAL
150
A
LEU
151
n
143
LEU
151
A
LEU
152
n
144
LEU
152
A
SER
153
n
145
SER
153
A
GLU
154
n
146
GLU
154
A
HIS
155
n
147
HIS
155
A
GLY
156
n
148
GLY
156
A
GLU
157
n
149
GLU
157
A
VAL
158
n
150
VAL
158
A
LYS
159
n
151
LYS
159
A
LEU
160
n
152
LEU
160
A
ALA
161
n
153
ALA
161
A
ASP
162
n
154
ASP
162
A
PHE
163
n
155
PHE
163
A
GLY
164
n
156
GLY
164
A
VAL
165
n
157
VAL
165
A
ALA
166
n
158
ALA
166
A
GLY
167
n
159
GLY
167
A
GLN
168
n
160
GLN
168
A
LEU
169
n
161
LEU
169
A
THR
170
n
162
THR
170
A
ASP
171
n
163
ASP
171
A
THR
172
n
164
THR
172
A
GLN
173
n
165
GLN
173
A
ILE
174
n
166
ILE
174
A
LYS
175
n
167
LYS
175
A
ARG
176
n
168
ARG
176
A
ASN
177
n
169
ASN
177
A
TPO
178
n
170
TPO
178
A
PHE
179
n
171
PHE
179
A
VAL
180
n
172
VAL
180
A
GLY
181
n
173
GLY
181
A
THR
182
n
174
THR
182
A
PRO
183
n
175
PRO
183
A
PHE
184
n
176
PHE
184
A
TRP
185
n
177
TRP
185
A
MET
186
n
178
MET
186
A
ALA
187
n
179
ALA
187
A
PRO
188
n
180
PRO
188
A
GLU
189
n
181
GLU
189
A
VAL
190
n
182
VAL
190
A
ILE
191
n
183
ILE
191
A
LYS
192
n
184
LYS
192
A
GLN
193
n
185
GLN
193
A
SER
194
n
186
SER
194
A
ALA
195
n
187
ALA
195
A
TYR
196
n
188
TYR
196
A
ASP
197
n
189
ASP
197
A
SER
198
n
190
SER
198
A
LYS
199
n
191
LYS
199
A
ALA
200
n
192
ALA
200
A
ASP
201
n
193
ASP
201
A
ILE
202
n
194
ILE
202
A
TRP
203
n
195
TRP
203
A
SER
204
n
196
SER
204
A
LEU
205
n
197
LEU
205
A
GLY
206
n
198
GLY
206
A
ILE
207
n
199
ILE
207
A
THR
208
n
200
THR
208
A
ALA
209
n
201
ALA
209
A
ILE
210
n
202
ILE
210
A
GLU
211
n
203
GLU
211
A
LEU
212
n
204
LEU
212
A
ALA
213
n
205
ALA
213
A
ARG
214
n
206
ARG
214
A
GLY
215
n
207
GLY
215
A
GLU
216
n
208
GLU
216
A
PRO
217
n
209
PRO
217
A
PRO
218
n
210
PRO
218
A
HIS
219
n
211
HIS
219
A
SER
220
n
212
SER
220
A
GLU
221
n
213
GLU
221
A
LEU
222
n
214
LEU
222
A
HIS
223
n
215
HIS
223
A
PRO
224
n
216
PRO
224
A
MET
225
n
217
MET
225
A
LYS
226
n
218
LYS
226
A
VAL
227
n
219
VAL
227
A
LEU
228
n
220
LEU
228
A
PHE
229
n
221
PHE
229
A
LEU
230
n
222
LEU
230
A
ILE
231
n
223
ILE
231
A
PRO
232
n
224
PRO
232
A
LYS
233
n
225
LYS
233
A
ASN
234
n
226
ASN
234
A
ASN
235
n
227
ASN
235
A
PRO
236
n
228
PRO
236
A
PRO
237
n
229
PRO
237
A
THR
238
n
230
THR
238
A
LEU
239
n
231
LEU
239
A
GLU
240
n
232
GLU
240
A
GLY
241
n
233
GLY
241
A
ASN
242
n
234
ASN
242
A
TYR
243
n
235
TYR
243
A
SER
244
n
236
SER
244
A
LYS
245
n
237
LYS
245
A
PRO
246
n
238
PRO
246
A
LEU
247
n
239
LEU
247
A
LYS
248
n
240
LYS
248
A
GLU
249
n
241
GLU
249
A
PHE
250
n
242
PHE
250
A
VAL
251
n
243
VAL
251
A
GLU
252
n
244
GLU
252
A
ALA
253
n
245
ALA
253
A
CYS
254
n
246
CYS
254
A
LEU
255
n
247
LEU
255
A
ASN
256
n
248
ASN
256
A
LYS
257
n
249
LYS
257
A
GLU
258
n
250
GLU
258
A
PRO
259
n
251
PRO
259
A
SER
260
n
252
SER
260
A
PHE
261
n
253
PHE
261
A
ARG
262
n
254
ARG
262
A
PRO
263
n
255
PRO
263
A
THR
264
n
256
THR
264
A
ALA
265
n
257
ALA
265
A
LYS
266
n
258
LYS
266
A
GLU
267
n
259
GLU
267
A
LEU
268
n
260
LEU
268
A
LEU
269
n
261
LEU
269
A
LYS
270
n
262
LYS
270
A
HIS
271
n
263
HIS
271
A
LYS
272
n
264
LYS
272
A
PHE
273
n
265
PHE
273
A
ILE
274
n
266
ILE
274
A
LEU
275
n
267
LEU
275
A
ARG
276
n
268
ARG
276
A
ASN
277
n
269
ASN
277
A
ALA
278
n
270
ALA
278
A
LYS
279
n
271
LYS
279
A
LYS
280
n
272
LYS
280
A
THR
281
n
273
THR
281
A
SER
282
n
274
SER
282
A
TYR
283
n
275
TYR
283
A
LEU
284
n
276
LEU
284
A
THR
285
n
277
THR
285
A
GLU
286
n
278
GLU
286
A
LEU
287
n
279
LEU
287
A
ILE
288
n
280
ILE
288
A
ASP
289
n
281
ASP
289
A
ARG
290
n
282
ARG
290
A
TYR
291
n
283
TYR
291
A
LYS
292
n
284
LYS
292
A
ARG
293
n
285
ARG
293
A
TRP
294
n
286
TRP
294
A
LYS
295
n
287
LYS
295
A
ALA
296
n
288
ALA
296
A
GLU
297
n
289
GLU
297
A
GLN
298
n
290
GLN
298
A
author_and_software_defined_assembly
PISA
1
monomeric
140
-4
13970
A
ASP
162
A
OD2
ASP
154
1_555
A
MN
301
B
MN
MN
1_555
A
HOH
639
D
O
HOH
1_555
82.6
A
ASP
162
A
OD2
ASP
154
1_555
A
MN
301
B
MN
MN
1_555
A
HOH
640
D
O
HOH
1_555
94.6
A
HOH
639
D
O
HOH
1_555
A
MN
301
B
MN
MN
1_555
A
HOH
640
D
O
HOH
1_555
172.7
A
ASP
162
A
OD2
ASP
154
1_555
A
MN
301
B
MN
MN
1_555
A
HOH
641
D
O
HOH
1_555
82.6
A
HOH
639
D
O
HOH
1_555
A
MN
301
B
MN
MN
1_555
A
HOH
641
D
O
HOH
1_555
105.1
A
HOH
640
D
O
HOH
1_555
A
MN
301
B
MN
MN
1_555
A
HOH
641
D
O
HOH
1_555
67.8
A
ASP
162
A
OD2
ASP
154
1_555
A
MN
301
B
MN
MN
1_555
A
HOH
642
D
O
HOH
1_555
103.5
A
HOH
639
D
O
HOH
1_555
A
MN
301
B
MN
MN
1_555
A
HOH
642
D
O
HOH
1_555
88.6
A
HOH
640
D
O
HOH
1_555
A
MN
301
B
MN
MN
1_555
A
HOH
642
D
O
HOH
1_555
98.7
A
HOH
641
D
O
HOH
1_555
A
MN
301
B
MN
MN
1_555
A
HOH
642
D
O
HOH
1_555
165.8
A
TPO
178
modified residue
A
TPO
170
THR
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
27
A
N
LEU
19
A
O
LYS
40
A
O
LYS
32
A
N
PHE
39
A
N
PHE
31
A
O
ILE
52
A
O
ILE
44
A
N
LYS
53
A
N
LYS
45
A
O
ILE
97
A
O
ILE
89
A
O
LYS
94
A
O
LYS
86
A
N
LYS
91
A
N
LYS
83
A
N
GLY
105
A
N
GLY
97
A
O
LEU
152
A
O
LEU
144
A
N
LEU
151
A
N
LEU
143
A
O
LYS
159
A
O
LYS
151
A
N
ILE
141
A
N
ILE
133
A
O
GLY
167
A
O
GLY
159
1
A
HOH
488
D
HOH
1
A
LEU
27
-111.51
-147.98
1
A
PHE
35
70.19
-16.32
1
A
ASP
92
59.35
-113.68
1
A
ARG
143
72.91
-5.59
1
A
ASP
162
66.34
76.30
1
A
ASP
197
-141.19
-150.23
38.48
11.9793
0.0000
3.6764
-8.0227
0.0000
-3.9566
0.9420
0.9295
0.2218
0.1900
0.1916
1.63
37.40
2145
42607
5.03
95.65
0.089
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
0.091
0.092
0.091
3a7j
0.223
1.63
37.40
262
2594
24
0
2308
0.010
2394
HARMONIC
2.00
1.07
3237
HARMONIC
2.00
856
SINUSOIDAL
2.00
63
HARMONIC
2.00
352
HARMONIC
5.00
2394
HARMONIC
20.00
0
SEMIHARMONIC
5.00
2.93
17.54
310
SEMIHARMONIC
5.00
2952
SEMIHARMONIC
4.00
0.2826
0.2450
0.2470
1.67
125
2329
2454
20
5.09
95.65
29.42
1.63
37.4
4U8Z
42612
0.030
1
16.4
3.1
96.3
refinement
BUSTER
2.11.2
Crystal structure of MST3 with a pyrrolopyrimidine inhibitor (PF-06447475)
1
N
N
2
N
N
3
N
N
4
N
N
A
ASP
19
A
ASP
11
HELX_P
A
LEU
23
A
LEU
15
1
AA1
5
A
GLU
63
A
GLU
55
HELX_P
A
CYS
77
A
CYS
69
1
AA2
15
A
ALA
107
A
ALA
99
HELX_P
A
LEU
111
A
LEU
103
1
AA3
5
A
ASP
117
A
ASP
109
HELX_P
A
GLU
138
A
GLU
130
1
AA4
22
A
LYS
146
A
LYS
138
HELX_P
A
ALA
148
A
ALA
140
5
AA5
3
A
THR
182
A
THR
174
HELX_P
A
MET
186
A
MET
178
5
AA6
5
A
ALA
187
A
ALA
179
HELX_P
A
LYS
192
A
LYS
184
1
AA7
6
A
SER
198
A
SER
190
HELX_P
A
GLY
215
A
GLY
207
1
AA8
18
A
HIS
223
A
HIS
215
HELX_P
A
ASN
234
A
ASN
226
1
AA9
12
A
SER
244
A
SER
236
HELX_P
A
LEU
255
A
LEU
247
1
AB1
12
A
GLU
258
A
GLU
250
HELX_P
A
ARG
262
A
ARG
254
5
AB2
5
A
THR
264
A
THR
256
HELX_P
A
LEU
269
A
LEU
261
1
AB3
6
A
HIS
271
A
HIS
263
HELX_P
A
ALA
278
A
ALA
270
1
AB4
8
A
LYS
280
A
LYS
272
HELX_P
A
TYR
283
A
TYR
275
5
AB5
4
A
LEU
284
A
LEU
276
HELX_P
A
GLU
297
A
GLU
289
1
AB6
14
covale
1.342
both
A
ASN
177
A
C
ASN
169
1_555
A
TPO
178
A
N
TPO
170
1_555
covale
1.356
both
A
TPO
178
A
C
TPO
170
1_555
A
PHE
179
A
N
PHE
171
1_555
metalc
2.151
A
ASP
162
A
OD2
ASP
154
1_555
A
MN
301
B
MN
MN
1_555
metalc
2.400
A
MN
301
B
MN
MN
1_555
A
HOH
639
D
O
HOH
1_555
metalc
2.271
A
MN
301
B
MN
MN
1_555
A
HOH
640
D
O
HOH
1_555
metalc
2.600
A
MN
301
B
MN
MN
1_555
A
HOH
641
D
O
HOH
1_555
metalc
2.298
A
MN
301
B
MN
MN
1_555
A
HOH
642
D
O
HOH
1_555
TRANSFERASE/TRANSFERASE INHIBITOR
MST3, pyrrolopyrimidine, inhibitor, kinase, TRANSFERASE-TRANSFERASE INHIBITOR complex
STK24_HUMAN
UNP
1
9
Q9Y6E0
GLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS
YLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ
LTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLK
EFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQ
9
298
4U8Z
9
298
Q9Y6E0
A
1
1
290
5
3
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
PHE
24
A
PHE
16
A
GLY
33
A
GLY
25
A
GLY
36
A
GLY
28
A
ASP
43
A
ASP
35
A
VAL
49
A
VAL
41
A
ASP
56
A
ASP
48
A
LYS
94
A
LYS
86
A
GLU
100
A
GLU
92
A
TYR
85
A
TYR
77
A
LYS
91
A
LYS
83
A
GLY
105
A
GLY
97
A
SER
106
A
SER
98
A
VAL
150
A
VAL
142
A
LEU
152
A
LEU
144
A
VAL
158
A
VAL
150
A
LEU
160
A
LEU
152
A
LYS
140
A
LYS
132
A
ILE
141
A
ILE
133
A
GLY
167
A
GLY
159
A
GLN
168
A
GLN
160
binding site for residue MN A 301
A
MN
301
Software
5
binding site for residue 3FE A 302
A
3FE
302
Software
15
A
ASP
162
A
ASP
154
5
1_555
A
HOH
639
D
HOH
5
1_555
A
HOH
640
D
HOH
5
1_555
A
HOH
641
D
HOH
5
1_555
A
HOH
642
D
HOH
5
1_555
A
ILE
30
A
ILE
22
15
1_555
A
GLY
31
A
GLY
23
15
1_555
A
LYS
32
A
LYS
24
15
1_555
A
ALA
51
A
ALA
43
15
1_555
A
LYS
53
A
LYS
45
15
1_555
A
GLU
70
A
GLU
62
15
1_555
A
GLU
100
A
GLU
92
15
1_555
A
TYR
101
A
TYR
93
15
1_555
A
LEU
102
A
LEU
94
15
1_555
A
LEU
151
A
LEU
143
15
1_555
A
ALA
161
A
ALA
153
15
1_555
A
ASP
162
A
ASP
154
15
1_555
A
HOH
541
D
HOH
15
1_555
A
HOH
575
D
HOH
15
1_555
A
HOH
644
D
HOH
15
1_555
5
C 1 2 1