0.016852
0.000000
0.000000
0.000000
0.010142
0.000000
0.000000
0.000000
0.009979
0.00000
0.00000
0.00000
Sahtoe, D.D.
Van Dijk, W.J.
El Oualid, F.
Ekkebus, R.
Ovaa, H.
Sixma, T.K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
59.340
98.600
100.211
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N
57.094
prop-2-en-1-amine
ALLYLAMINE
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Mol.Cell
MOCEFL
2168
1097-2765
57
887
10.1016/J.MOLCEL.2014.12.039
25702870
Mechanism of Uch-L5 Activation and Inhibition by Deubad Domains in Rpn13 and Ino80G.
2015
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
PIXEL
2013-09-02
DECTRIS PILATUS 2M-F
SINGLE WAVELENGTH
M
x-ray
1
0
1.0
ID23-2
ESRF
0
SYNCHROTRON
ESRF BEAMLINE ID23-2
ACTIVE SITE CYS88 COVALENTLY LINKED TO UBIQUITIN-PROPARGYL
37734.934
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE ISOZYME L5
3.4.19.12
1
man
polymer
GLY76 OF UBIQUITIN IS REPLACED BY GLY-AYE THAT IS COVALENTLY LINKED TO THE ACTIVE SITE CYS88 OF UCH-L5
8558.857
POLYUBIQUITIN-B
YES
1
syn
polymer
13065.674
PROTEASOMAL UBIQUITIN RECEPTOR ADRM1
DEUBAD DOMAIN, RESIDUES 266-388
1
man
polymer
18.015
water
234
nat
water
UCH-L5, UBIQUITIN C-TERMINAL HYDROLASE UCH37, UBIQUITIN THIOESTERASE L5
UBIQUITIN
RPN13,110 KDA CELL MEMBRANE GLYCOPROTEIN, GP110, ADHESION-REGULATING MOLECULE 1, ARM-1, PROTEASOME REGULATORY PARTICLE NON-ATPASE 13, HRPN13, RPN13 HOMOLOG
no
no
GPGMTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTI
FFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMFEFDTKTSA
KEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAE
LQRQLAEEPMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKE
KQNAKKAQETK
GPGMTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTI
FFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMFEFDTKTSA
KEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAE
LQRQLAEEPMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKE
KQNAKKAQETK
A
polypeptide(L)
no
yes
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG(AYE)
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGX
B
polypeptide(L)
no
no
GPGSDLQSILATMNVPAGPAGGQQVDLASVLTPEIMAPILANADVQERLLPYLPSGESLPQTADEIQNTLTSPQFQQALG
MFSAALASGQLGPLMCQFGLPAEAVEAANKGDVEAFAKAMQNNAKPE
GPGSDLQSILATMNVPAGPAGGQQVDLASVLTPEIMAPILANADVQERLLPYLPSGESLPQTADEIQNTLTSPQFQQALG
MFSAALASGQLGPLMCQFGLPAEAVEAANKGDVEAFAKAMQNNAKPE
C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
ISOFORM 3
469008
ESCHERICHIA COLI
BL21(DE3)
ROSETTA 2
PLASMID
PGEX-NKI-3C-LIC
HUMAN
sample
9606
HOMO SAPIENS
469008
ESCHERICHIA COLI
BL21(DE3)
ROSETTA 2
PLASMID
PCDF-NKI-HIS-3C-LIC
2.4
49
MOLECULAR REPLACEMENT WAS PERFORMED WITH THE PARTIALLY BUILD UCH-L5-RPN13 STRUCTURE, SEE RELATED PDB
100 MM BIS-TRIS-PROPANE PH 5.8, 300 MM NABR, 21% PEG3350. 4 DEGREES CELSIUS
277
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
pdbx_seq_map_depositor_info
struct_conn
repository
Initial release
Database references
Data collection
Derived calculations
Experimental preparation
Other
1
0
2015-03-04
1
1
2015-03-25
1
2
2019-04-03
_exptl_crystal_grow.temp
_pdbx_database_status.recvd_author_approval
_pdbx_seq_map_depositor_info.one_letter_code_mod
_struct_conn.pdbx_leaving_atom_flag
UCH-L5 IN COMPLEX WITH THE RPN13 DEUBAD DOMAIN
PDBE
Y
PDBE
2014-12-18
REL
HOH
water
9606
HUMAN
HOMO SAPIENS
sample
GLY76 IN NATIVE UBIQUITIN IS REPLACED BY AYE
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2013
4
HOH
HOH
2013
A
HOH
2014
4
HOH
HOH
2014
A
HOH
2015
4
HOH
HOH
2015
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2017
4
HOH
HOH
2017
A
HOH
2018
4
HOH
HOH
2018
A
HOH
2019
4
HOH
HOH
2019
A
HOH
2020
4
HOH
HOH
2020
A
HOH
2021
4
HOH
HOH
2021
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2023
4
HOH
HOH
2023
A
HOH
2024
4
HOH
HOH
2024
A
HOH
2025
4
HOH
HOH
2025
A
HOH
2026
4
HOH
HOH
2026
A
HOH
2027
4
HOH
HOH
2027
A
HOH
2028
4
HOH
HOH
2028
A
HOH
2029
4
HOH
HOH
2029
A
HOH
2030
4
HOH
HOH
2030
A
HOH
2031
4
HOH
HOH
2031
A
HOH
2032
4
HOH
HOH
2032
A
HOH
2033
4
HOH
HOH
2033
A
HOH
2034
4
HOH
HOH
2034
A
HOH
2035
4
HOH
HOH
2035
A
HOH
2036
4
HOH
HOH
2036
A
HOH
2037
4
HOH
HOH
2037
A
HOH
2038
4
HOH
HOH
2038
A
HOH
2039
4
HOH
HOH
2039
A
HOH
2040
4
HOH
HOH
2040
A
HOH
2041
4
HOH
HOH
2041
A
HOH
2042
4
HOH
HOH
2042
A
HOH
2043
4
HOH
HOH
2043
A
HOH
2044
4
HOH
HOH
2044
A
HOH
2045
4
HOH
HOH
2045
A
HOH
2046
4
HOH
HOH
2046
A
HOH
2047
4
HOH
HOH
2047
A
HOH
2048
4
HOH
HOH
2048
A
HOH
2049
4
HOH
HOH
2049
A
HOH
2050
4
HOH
HOH
2050
A
HOH
2051
4
HOH
HOH
2051
A
HOH
2052
4
HOH
HOH
2052
A
HOH
2053
4
HOH
HOH
2053
A
HOH
2054
4
HOH
HOH
2054
A
HOH
2055
4
HOH
HOH
2055
A
HOH
2056
4
HOH
HOH
2056
A
HOH
2057
4
HOH
HOH
2057
A
HOH
2058
4
HOH
HOH
2058
A
HOH
2059
4
HOH
HOH
2059
A
HOH
2060
4
HOH
HOH
2060
A
HOH
2061
4
HOH
HOH
2061
A
HOH
2062
4
HOH
HOH
2062
A
HOH
2063
4
HOH
HOH
2063
A
HOH
2064
4
HOH
HOH
2064
A
HOH
2065
4
HOH
HOH
2065
A
HOH
2066
4
HOH
HOH
2066
A
HOH
2067
4
HOH
HOH
2067
A
HOH
2068
4
HOH
HOH
2068
A
HOH
2069
4
HOH
HOH
2069
A
HOH
2070
4
HOH
HOH
2070
A
HOH
2071
4
HOH
HOH
2071
A
HOH
2072
4
HOH
HOH
2072
A
HOH
2073
4
HOH
HOH
2073
A
HOH
2074
4
HOH
HOH
2074
A
HOH
2075
4
HOH
HOH
2075
A
HOH
2076
4
HOH
HOH
2076
A
HOH
2077
4
HOH
HOH
2077
A
HOH
2078
4
HOH
HOH
2078
A
HOH
2079
4
HOH
HOH
2079
A
HOH
2080
4
HOH
HOH
2080
A
HOH
2081
4
HOH
HOH
2081
A
HOH
2082
4
HOH
HOH
2082
A
HOH
2083
4
HOH
HOH
2083
A
HOH
2084
4
HOH
HOH
2084
A
HOH
2085
4
HOH
HOH
2085
A
HOH
2086
4
HOH
HOH
2086
A
HOH
2087
4
HOH
HOH
2087
A
HOH
2088
4
HOH
HOH
2088
A
HOH
2089
4
HOH
HOH
2089
A
HOH
2090
4
HOH
HOH
2090
A
HOH
2091
4
HOH
HOH
2091
A
HOH
2092
4
HOH
HOH
2092
A
HOH
2093
4
HOH
HOH
2093
A
HOH
2094
4
HOH
HOH
2094
A
HOH
2095
4
HOH
HOH
2095
A
HOH
2096
4
HOH
HOH
2096
A
HOH
2097
4
HOH
HOH
2097
A
HOH
2098
4
HOH
HOH
2098
A
HOH
2099
4
HOH
HOH
2099
A
HOH
2100
4
HOH
HOH
2100
A
HOH
2101
4
HOH
HOH
2101
A
HOH
2102
4
HOH
HOH
2102
A
HOH
2103
4
HOH
HOH
2103
A
HOH
2104
4
HOH
HOH
2104
A
HOH
2105
4
HOH
HOH
2105
A
HOH
2106
4
HOH
HOH
2106
A
HOH
2107
4
HOH
HOH
2107
A
HOH
2108
4
HOH
HOH
2108
A
HOH
2109
4
HOH
HOH
2109
A
HOH
2110
4
HOH
HOH
2110
A
HOH
2111
4
HOH
HOH
2111
A
HOH
2112
4
HOH
HOH
2112
A
HOH
2113
4
HOH
HOH
2113
A
HOH
2114
4
HOH
HOH
2114
A
HOH
2115
4
HOH
HOH
2115
A
HOH
2116
4
HOH
HOH
2116
A
HOH
2117
4
HOH
HOH
2117
A
HOH
2118
4
HOH
HOH
2118
A
HOH
2119
4
HOH
HOH
2119
A
HOH
2120
4
HOH
HOH
2120
A
HOH
2121
4
HOH
HOH
2121
A
HOH
2122
4
HOH
HOH
2122
A
HOH
2123
4
HOH
HOH
2123
A
HOH
2124
4
HOH
HOH
2124
A
HOH
2125
4
HOH
HOH
2125
A
HOH
2126
4
HOH
HOH
2126
A
HOH
2127
4
HOH
HOH
2127
A
HOH
2128
4
HOH
HOH
2128
A
HOH
2129
4
HOH
HOH
2129
A
HOH
2130
4
HOH
HOH
2130
A
HOH
2131
4
HOH
HOH
2131
A
HOH
2132
4
HOH
HOH
2132
A
HOH
2133
4
HOH
HOH
2133
A
HOH
2134
4
HOH
HOH
2134
A
HOH
2135
4
HOH
HOH
2135
A
HOH
2136
4
HOH
HOH
2136
A
HOH
2137
4
HOH
HOH
2137
A
HOH
2138
4
HOH
HOH
2138
A
HOH
2139
4
HOH
HOH
2139
A
HOH
2140
4
HOH
HOH
2140
A
HOH
2141
4
HOH
HOH
2141
A
HOH
2142
4
HOH
HOH
2142
A
HOH
2143
4
HOH
HOH
2143
A
HOH
2144
4
HOH
HOH
2144
A
HOH
2145
4
HOH
HOH
2145
A
HOH
2146
4
HOH
HOH
2146
A
HOH
2147
4
HOH
HOH
2147
A
HOH
2148
4
HOH
HOH
2148
A
HOH
2149
4
HOH
HOH
2149
A
HOH
2150
4
HOH
HOH
2150
A
HOH
2151
4
HOH
HOH
2151
A
HOH
2152
4
HOH
HOH
2152
A
HOH
2153
4
HOH
HOH
2153
A
HOH
2154
4
HOH
HOH
2154
A
HOH
2155
4
HOH
HOH
2155
A
HOH
2156
4
HOH
HOH
2156
A
HOH
2157
4
HOH
HOH
2157
A
HOH
2158
4
HOH
HOH
2158
A
HOH
2159
4
HOH
HOH
2159
A
HOH
2160
4
HOH
HOH
2160
A
HOH
2161
4
HOH
HOH
2161
A
HOH
2162
4
HOH
HOH
2162
A
HOH
2163
4
HOH
HOH
2163
A
HOH
2164
4
HOH
HOH
2164
A
HOH
2165
4
HOH
HOH
2165
A
HOH
2166
4
HOH
HOH
2166
A
HOH
2167
4
HOH
HOH
2167
A
HOH
2168
4
HOH
HOH
2168
A
HOH
2169
4
HOH
HOH
2169
A
HOH
2170
4
HOH
HOH
2170
A
HOH
2171
4
HOH
HOH
2171
A
HOH
2172
4
HOH
HOH
2172
A
HOH
2173
4
HOH
HOH
2173
A
HOH
2174
4
HOH
HOH
2174
A
HOH
2175
4
HOH
HOH
2175
A
HOH
2176
4
HOH
HOH
2176
A
HOH
2177
4
HOH
HOH
2177
A
HOH
2178
4
HOH
HOH
2178
A
HOH
2179
4
HOH
HOH
2179
A
HOH
2180
4
HOH
HOH
2180
A
HOH
2181
4
HOH
HOH
2181
A
HOH
2182
4
HOH
HOH
2182
A
HOH
2183
4
HOH
HOH
2183
A
HOH
2184
4
HOH
HOH
2184
A
HOH
2185
4
HOH
HOH
2185
A
HOH
2186
4
HOH
HOH
2186
A
HOH
2187
4
HOH
HOH
2187
A
HOH
2188
4
HOH
HOH
2188
A
HOH
2189
4
HOH
HOH
2189
A
HOH
2001
4
HOH
HOH
2001
B
HOH
2002
4
HOH
HOH
2002
B
HOH
2003
4
HOH
HOH
2003
B
HOH
2004
4
HOH
HOH
2004
B
HOH
2005
4
HOH
HOH
2005
B
HOH
2006
4
HOH
HOH
2006
B
HOH
2007
4
HOH
HOH
2007
B
HOH
2008
4
HOH
HOH
2008
B
HOH
2009
4
HOH
HOH
2009
B
HOH
2010
4
HOH
HOH
2010
B
HOH
2011
4
HOH
HOH
2011
B
HOH
2012
4
HOH
HOH
2012
B
HOH
2013
4
HOH
HOH
2013
B
HOH
2014
4
HOH
HOH
2014
B
HOH
2015
4
HOH
HOH
2015
B
HOH
2016
4
HOH
HOH
2016
B
HOH
2017
4
HOH
HOH
2017
B
HOH
2018
4
HOH
HOH
2018
B
HOH
2019
4
HOH
HOH
2019
B
HOH
2020
4
HOH
HOH
2020
B
HOH
2021
4
HOH
HOH
2021
B
HOH
2022
4
HOH
HOH
2022
B
HOH
2023
4
HOH
HOH
2023
B
HOH
2024
4
HOH
HOH
2024
B
HOH
2025
4
HOH
HOH
2025
B
HOH
2001
4
HOH
HOH
2001
C
HOH
2002
4
HOH
HOH
2002
C
HOH
2003
4
HOH
HOH
2003
C
HOH
2004
4
HOH
HOH
2004
C
HOH
2005
4
HOH
HOH
2005
C
HOH
2006
4
HOH
HOH
2006
C
HOH
2007
4
HOH
HOH
2007
C
HOH
2008
4
HOH
HOH
2008
C
HOH
2009
4
HOH
HOH
2009
C
HOH
2010
4
HOH
HOH
2010
C
HOH
2011
4
HOH
HOH
2011
C
HOH
2012
4
HOH
HOH
2012
C
HOH
2013
4
HOH
HOH
2013
C
HOH
2014
4
HOH
HOH
2014
C
HOH
2015
4
HOH
HOH
2015
C
HOH
2016
4
HOH
HOH
2016
C
HOH
2017
4
HOH
HOH
2017
C
HOH
2018
4
HOH
HOH
2018
C
HOH
2019
4
HOH
HOH
2019
C
HOH
2020
4
HOH
HOH
2020
C
n
1
-2
A
n
2
-1
A
n
3
0
A
n
4
1
A
n
5
2
A
n
6
3
A
n
7
4
A
n
8
5
A
GLY
6
n
9
GLY
6
A
GLU
7
n
10
GLU
7
A
TRP
8
n
11
TRP
8
A
CYS
9
n
12
CYS
9
A
LEU
10
n
13
LEU
10
A
MET
11
n
14
MET
11
A
GLU
12
n
15
GLU
12
A
SER
13
n
16
SER
13
A
ASP
14
n
17
ASP
14
A
PRO
15
n
18
PRO
15
A
GLY
16
n
19
GLY
16
A
VAL
17
n
20
VAL
17
A
PHE
18
n
21
PHE
18
A
THR
19
n
22
THR
19
A
GLU
20
n
23
GLU
20
A
LEU
21
n
24
LEU
21
A
ILE
22
n
25
ILE
22
A
LYS
23
n
26
LYS
23
A
GLY
24
n
27
GLY
24
A
PHE
25
n
28
PHE
25
A
GLY
26
n
29
GLY
26
A
CYS
27
n
30
CYS
27
A
ARG
28
n
31
ARG
28
A
GLY
29
n
32
GLY
29
A
ALA
30
n
33
ALA
30
A
GLN
31
n
34
GLN
31
A
VAL
32
n
35
VAL
32
A
GLU
33
n
36
GLU
33
A
GLU
34
n
37
GLU
34
A
ILE
35
n
38
ILE
35
A
TRP
36
n
39
TRP
36
A
SER
37
n
40
SER
37
A
LEU
38
n
41
LEU
38
A
GLU
39
n
42
GLU
39
A
PRO
40
n
43
PRO
40
A
GLU
41
n
44
GLU
41
A
ASN
42
n
45
ASN
42
A
PHE
43
n
46
PHE
43
A
GLU
44
n
47
GLU
44
A
LYS
45
n
48
LYS
45
A
LEU
46
n
49
LEU
46
A
LYS
47
n
50
LYS
47
A
PRO
48
n
51
PRO
48
A
VAL
49
n
52
VAL
49
A
HIS
50
n
53
HIS
50
A
GLY
51
n
54
GLY
51
A
LEU
52
n
55
LEU
52
A
ILE
53
n
56
ILE
53
A
PHE
54
n
57
PHE
54
A
LEU
55
n
58
LEU
55
A
PHE
56
n
59
PHE
56
A
LYS
57
n
60
LYS
57
A
TRP
58
n
61
TRP
58
A
GLN
59
n
62
GLN
59
A
PRO
60
n
63
PRO
60
A
GLY
61
n
64
GLY
61
A
GLU
62
n
65
GLU
62
A
GLU
63
n
66
GLU
63
A
PRO
64
n
67
PRO
64
A
ALA
65
n
68
ALA
65
A
GLY
66
n
69
GLY
66
A
SER
67
n
70
SER
67
A
VAL
68
n
71
VAL
68
A
VAL
69
n
72
VAL
69
A
GLN
70
n
73
GLN
70
A
ASP
71
n
74
ASP
71
A
SER
72
n
75
SER
72
A
ARG
73
n
76
ARG
73
A
LEU
74
n
77
LEU
74
A
ASP
75
n
78
ASP
75
A
THR
76
n
79
THR
76
A
ILE
77
n
80
ILE
77
A
PHE
78
n
81
PHE
78
A
PHE
79
n
82
PHE
79
A
ALA
80
n
83
ALA
80
A
LYS
81
n
84
LYS
81
A
GLN
82
n
85
GLN
82
A
VAL
83
n
86
VAL
83
A
ILE
84
n
87
ILE
84
A
ASN
85
n
88
ASN
85
A
ASN
86
n
89
ASN
86
A
ALA
87
n
90
ALA
87
A
CYS
88
n
91
CYS
88
A
ALA
89
n
92
ALA
89
A
THR
90
n
93
THR
90
A
GLN
91
n
94
GLN
91
A
ALA
92
n
95
ALA
92
A
ILE
93
n
96
ILE
93
A
VAL
94
n
97
VAL
94
A
SER
95
n
98
SER
95
A
VAL
96
n
99
VAL
96
A
LEU
97
n
100
LEU
97
A
LEU
98
n
101
LEU
98
A
ASN
99
n
102
ASN
99
A
CYS
100
n
103
CYS
100
A
THR
101
n
104
THR
101
A
HIS
102
n
105
HIS
102
A
GLN
103
n
106
GLN
103
A
ASP
104
n
107
ASP
104
A
VAL
105
n
108
VAL
105
A
HIS
106
n
109
HIS
106
A
LEU
107
n
110
LEU
107
A
GLY
108
n
111
GLY
108
A
GLU
109
n
112
GLU
109
A
THR
110
n
113
THR
110
A
LEU
111
n
114
LEU
111
A
SER
112
n
115
SER
112
A
GLU
113
n
116
GLU
113
A
PHE
114
n
117
PHE
114
A
LYS
115
n
118
LYS
115
A
GLU
116
n
119
GLU
116
A
PHE
117
n
120
PHE
117
A
SER
118
n
121
SER
118
A
GLN
119
n
122
GLN
119
A
SER
120
n
123
SER
120
A
PHE
121
n
124
PHE
121
A
ASP
122
n
125
ASP
122
A
ALA
123
n
126
ALA
123
A
ALA
124
n
127
ALA
124
A
MET
125
n
128
MET
125
A
LYS
126
n
129
LYS
126
A
GLY
127
n
130
GLY
127
A
LEU
128
n
131
LEU
128
A
ALA
129
n
132
ALA
129
A
LEU
130
n
133
LEU
130
A
SER
131
n
134
SER
131
A
ASN
132
n
135
ASN
132
A
SER
133
n
136
SER
133
A
ASP
134
n
137
ASP
134
A
VAL
135
n
138
VAL
135
A
ILE
136
n
139
ILE
136
A
ARG
137
n
140
ARG
137
A
GLN
138
n
141
GLN
138
A
VAL
139
n
142
VAL
139
A
HIS
140
n
143
HIS
140
A
ASN
141
n
144
ASN
141
A
SER
142
n
145
SER
142
A
PHE
143
n
146
PHE
143
A
ALA
144
n
147
ALA
144
A
ARG
145
n
148
ARG
145
A
GLN
146
n
149
GLN
146
A
GLN
147
n
150
GLN
147
A
MET
148
n
151
MET
148
A
PHE
149
n
152
PHE
149
A
GLU
150
n
153
GLU
150
A
PHE
151
n
154
PHE
151
A
ASP
152
n
155
ASP
152
A
THR
153
n
156
THR
153
A
n
157
154
A
n
158
155
A
n
159
156
A
n
160
157
A
n
161
158
A
n
162
159
A
GLU
160
n
163
GLU
160
A
ASP
161
n
164
ASP
161
A
ALA
162
n
165
ALA
162
A
PHE
163
n
166
PHE
163
A
HIS
164
n
167
HIS
164
A
PHE
165
n
168
PHE
165
A
VAL
166
n
169
VAL
166
A
SER
167
n
170
SER
167
A
TYR
168
n
171
TYR
168
A
VAL
169
n
172
VAL
169
A
PRO
170
n
173
PRO
170
A
VAL
171
n
174
VAL
171
A
ASN
172
n
175
ASN
172
A
GLY
173
n
176
GLY
173
A
ARG
174
n
177
ARG
174
A
LEU
175
n
178
LEU
175
A
TYR
176
n
179
TYR
176
A
GLU
177
n
180
GLU
177
A
LEU
178
n
181
LEU
178
A
ASP
179
n
182
ASP
179
A
GLY
180
n
183
GLY
180
A
LEU
181
n
184
LEU
181
A
ARG
182
n
185
ARG
182
A
GLU
183
n
186
GLU
183
A
GLY
184
n
187
GLY
184
A
PRO
185
n
188
PRO
185
A
ILE
186
n
189
ILE
186
A
ASP
187
n
190
ASP
187
A
LEU
188
n
191
LEU
188
A
GLY
189
n
192
GLY
189
A
ALA
190
n
193
ALA
190
A
CYS
191
n
194
CYS
191
A
ASN
192
n
195
ASN
192
A
GLN
193
n
196
GLN
193
A
ASP
194
n
197
ASP
194
A
ASP
195
n
198
ASP
195
A
TRP
196
n
199
TRP
196
A
ILE
197
n
200
ILE
197
A
SER
198
n
201
SER
198
A
ALA
199
n
202
ALA
199
A
VAL
200
n
203
VAL
200
A
ARG
201
n
204
ARG
201
A
PRO
202
n
205
PRO
202
A
VAL
203
n
206
VAL
203
A
ILE
204
n
207
ILE
204
A
GLU
205
n
208
GLU
205
A
LYS
206
n
209
LYS
206
A
ARG
207
n
210
ARG
207
A
ILE
208
n
211
ILE
208
A
GLN
209
n
212
GLN
209
A
LYS
210
n
213
LYS
210
A
TYR
211
n
214
TYR
211
A
SER
212
n
215
SER
212
A
GLU
213
n
216
GLU
213
A
GLY
214
n
217
GLY
214
A
GLU
215
n
218
GLU
215
A
ILE
216
n
219
ILE
216
A
ARG
217
n
220
ARG
217
A
PHE
218
n
221
PHE
218
A
ASN
219
n
222
ASN
219
A
LEU
220
n
223
LEU
220
A
MET
221
n
224
MET
221
A
ALA
222
n
225
ALA
222
A
ILE
223
n
226
ILE
223
A
VAL
224
n
227
VAL
224
A
SER
225
n
228
SER
225
A
ASP
226
n
229
ASP
226
A
ARG
227
n
230
ARG
227
A
LYS
228
n
231
LYS
228
A
MET
229
n
232
MET
229
A
ILE
230
n
233
ILE
230
A
TYR
231
n
234
TYR
231
A
GLU
232
n
235
GLU
232
A
GLN
233
n
236
GLN
233
A
LYS
234
n
237
LYS
234
A
ILE
235
n
238
ILE
235
A
ALA
236
n
239
ALA
236
A
GLU
237
n
240
GLU
237
A
LEU
238
n
241
LEU
238
A
GLN
239
n
242
GLN
239
A
ARG
240
n
243
ARG
240
A
GLN
241
n
244
GLN
241
A
LEU
242
n
245
LEU
242
A
ALA
243
n
246
ALA
243
A
GLU
244
n
247
GLU
244
A
GLU
245
n
248
GLU
245
A
n
249
246
A
n
250
247
A
n
251
248
A
n
252
249
A
n
253
250
A
n
254
251
A
n
255
252
A
ASN
253
n
256
ASN
253
A
SER
254
n
257
SER
254
A
MET
255
n
258
MET
255
A
LEU
256
n
259
LEU
256
A
SER
257
n
260
SER
257
A
ALA
258
n
261
ALA
258
A
ILE
259
n
262
ILE
259
A
GLN
260
n
263
GLN
260
A
SER
261
n
264
SER
261
A
GLU
262
n
265
GLU
262
A
VAL
263
n
266
VAL
263
A
ALA
264
n
267
ALA
264
A
LYS
265
n
268
LYS
265
A
ASN
266
n
269
ASN
266
A
GLN
267
n
270
GLN
267
A
MET
268
n
271
MET
268
A
LEU
269
n
272
LEU
269
A
ILE
270
n
273
ILE
270
A
GLU
271
n
274
GLU
271
A
GLU
272
n
275
GLU
272
A
GLU
273
n
276
GLU
273
A
VAL
274
n
277
VAL
274
A
GLN
275
n
278
GLN
275
A
LYS
276
n
279
LYS
276
A
LEU
277
n
280
LEU
277
A
LYS
278
n
281
LYS
278
A
ARG
279
n
282
ARG
279
A
TYR
280
n
283
TYR
280
A
LYS
281
n
284
LYS
281
A
ILE
282
n
285
ILE
282
A
GLU
283
n
286
GLU
283
A
ASN
284
n
287
ASN
284
A
ILE
285
n
288
ILE
285
A
ARG
286
n
289
ARG
286
A
ARG
287
n
290
ARG
287
A
LYS
288
n
291
LYS
288
A
HIS
289
n
292
HIS
289
A
ASN
290
n
293
ASN
290
A
TYR
291
n
294
TYR
291
A
LEU
292
n
295
LEU
292
A
PRO
293
n
296
PRO
293
A
PHE
294
n
297
PHE
294
A
ILE
295
n
298
ILE
295
A
MET
296
n
299
MET
296
A
GLU
297
n
300
GLU
297
A
LEU
298
n
301
LEU
298
A
LEU
299
n
302
LEU
299
A
LYS
300
n
303
LYS
300
A
THR
301
n
304
THR
301
A
LEU
302
n
305
LEU
302
A
ALA
303
n
306
ALA
303
A
GLU
304
n
307
GLU
304
A
HIS
305
n
308
HIS
305
A
GLN
306
n
309
GLN
306
A
GLN
307
n
310
GLN
307
A
LEU
308
n
311
LEU
308
A
ILE
309
n
312
ILE
309
A
PRO
310
n
313
PRO
310
A
LEU
311
n
314
LEU
311
A
VAL
312
n
315
VAL
312
A
GLU
313
n
316
GLU
313
A
LYS
314
n
317
LYS
314
A
ALA
315
n
318
ALA
315
A
LYS
316
n
319
LYS
316
A
GLU
317
n
320
GLU
317
A
LYS
318
n
321
LYS
318
A
GLN
319
n
322
GLN
319
A
ASN
320
n
323
ASN
320
A
n
324
321
A
n
325
322
A
n
326
323
A
n
327
324
A
n
328
325
A
n
329
326
A
n
330
327
A
n
331
328
A
MET
1
n
1
MET
1
B
GLN
2
n
2
GLN
2
B
ILE
3
n
3
ILE
3
B
PHE
4
n
4
PHE
4
B
VAL
5
n
5
VAL
5
B
LYS
6
n
6
LYS
6
B
THR
7
n
7
THR
7
B
LEU
8
n
8
LEU
8
B
THR
9
n
9
THR
9
B
GLY
10
n
10
GLY
10
B
LYS
11
n
11
LYS
11
B
THR
12
n
12
THR
12
B
ILE
13
n
13
ILE
13
B
THR
14
n
14
THR
14
B
LEU
15
n
15
LEU
15
B
GLU
16
n
16
GLU
16
B
VAL
17
n
17
VAL
17
B
GLU
18
n
18
GLU
18
B
PRO
19
n
19
PRO
19
B
SER
20
n
20
SER
20
B
ASP
21
n
21
ASP
21
B
THR
22
n
22
THR
22
B
ILE
23
n
23
ILE
23
B
GLU
24
n
24
GLU
24
B
ASN
25
n
25
ASN
25
B
VAL
26
n
26
VAL
26
B
LYS
27
n
27
LYS
27
B
ALA
28
n
28
ALA
28
B
LYS
29
n
29
LYS
29
B
ILE
30
n
30
ILE
30
B
GLN
31
n
31
GLN
31
B
ASP
32
n
32
ASP
32
B
LYS
33
n
33
LYS
33
B
GLU
34
n
34
GLU
34
B
GLY
35
n
35
GLY
35
B
ILE
36
n
36
ILE
36
B
PRO
37
n
37
PRO
37
B
PRO
38
n
38
PRO
38
B
ASP
39
n
39
ASP
39
B
GLN
40
n
40
GLN
40
B
GLN
41
n
41
GLN
41
B
ARG
42
n
42
ARG
42
B
LEU
43
n
43
LEU
43
B
ILE
44
n
44
ILE
44
B
PHE
45
n
45
PHE
45
B
ALA
46
n
46
ALA
46
B
GLY
47
n
47
GLY
47
B
LYS
48
n
48
LYS
48
B
GLN
49
n
49
GLN
49
B
LEU
50
n
50
LEU
50
B
GLU
51
n
51
GLU
51
B
ASP
52
n
52
ASP
52
B
GLY
53
n
53
GLY
53
B
ARG
54
n
54
ARG
54
B
THR
55
n
55
THR
55
B
LEU
56
n
56
LEU
56
B
SER
57
n
57
SER
57
B
ASP
58
n
58
ASP
58
B
TYR
59
n
59
TYR
59
B
ASN
60
n
60
ASN
60
B
ILE
61
n
61
ILE
61
B
GLN
62
n
62
GLN
62
B
LYS
63
n
63
LYS
63
B
GLU
64
n
64
GLU
64
B
SER
65
n
65
SER
65
B
THR
66
n
66
THR
66
B
LEU
67
n
67
LEU
67
B
HIS
68
n
68
HIS
68
B
LEU
69
n
69
LEU
69
B
VAL
70
n
70
VAL
70
B
LEU
71
n
71
LEU
71
B
ARG
72
n
72
ARG
72
B
LEU
73
n
73
LEU
73
B
ARG
74
n
74
ARG
74
B
GLY
75
n
75
GLY
75
B
AYE
76
n
76
AYE
76
B
n
1
262
C
n
2
263
C
n
3
264
C
n
4
265
C
n
5
266
C
n
6
267
C
n
7
268
C
n
8
269
C
n
9
270
C
n
10
271
C
n
11
272
C
n
12
273
C
n
13
274
C
n
14
275
C
n
15
276
C
n
16
277
C
n
17
278
C
n
18
279
C
n
19
280
C
n
20
281
C
n
21
282
C
n
22
283
C
n
23
284
C
n
24
285
C
n
25
286
C
ASP
287
n
26
ASP
287
C
LEU
288
n
27
LEU
288
C
ALA
289
n
28
ALA
289
C
SER
290
n
29
SER
290
C
VAL
291
n
30
VAL
291
C
LEU
292
n
31
LEU
292
C
THR
293
n
32
THR
293
C
PRO
294
n
33
PRO
294
C
GLU
295
n
34
GLU
295
C
ILE
296
n
35
ILE
296
C
MET
297
n
36
MET
297
C
ALA
298
n
37
ALA
298
C
PRO
299
n
38
PRO
299
C
ILE
300
n
39
ILE
300
C
LEU
301
n
40
LEU
301
C
ALA
302
n
41
ALA
302
C
ASN
303
n
42
ASN
303
C
ALA
304
n
43
ALA
304
C
ASP
305
n
44
ASP
305
C
VAL
306
n
45
VAL
306
C
GLN
307
n
46
GLN
307
C
GLU
308
n
47
GLU
308
C
ARG
309
n
48
ARG
309
C
LEU
310
n
49
LEU
310
C
LEU
311
n
50
LEU
311
C
PRO
312
n
51
PRO
312
C
TYR
313
n
52
TYR
313
C
LEU
314
n
53
LEU
314
C
PRO
315
n
54
PRO
315
C
SER
316
n
55
SER
316
C
GLY
317
n
56
GLY
317
C
GLU
318
n
57
GLU
318
C
SER
319
n
58
SER
319
C
LEU
320
n
59
LEU
320
C
PRO
321
n
60
PRO
321
C
GLN
322
n
61
GLN
322
C
THR
323
n
62
THR
323
C
ALA
324
n
63
ALA
324
C
ASP
325
n
64
ASP
325
C
GLU
326
n
65
GLU
326
C
ILE
327
n
66
ILE
327
C
GLN
328
n
67
GLN
328
C
ASN
329
n
68
ASN
329
C
THR
330
n
69
THR
330
C
LEU
331
n
70
LEU
331
C
THR
332
n
71
THR
332
C
SER
333
n
72
SER
333
C
PRO
334
n
73
PRO
334
C
GLN
335
n
74
GLN
335
C
PHE
336
n
75
PHE
336
C
GLN
337
n
76
GLN
337
C
GLN
338
n
77
GLN
338
C
ALA
339
n
78
ALA
339
C
LEU
340
n
79
LEU
340
C
GLY
341
n
80
GLY
341
C
MET
342
n
81
MET
342
C
PHE
343
n
82
PHE
343
C
SER
344
n
83
SER
344
C
ALA
345
n
84
ALA
345
C
ALA
346
n
85
ALA
346
C
LEU
347
n
86
LEU
347
C
ALA
348
n
87
ALA
348
C
SER
349
n
88
SER
349
C
GLY
350
n
89
GLY
350
C
GLN
351
n
90
GLN
351
C
LEU
352
n
91
LEU
352
C
GLY
353
n
92
GLY
353
C
PRO
354
n
93
PRO
354
C
LEU
355
n
94
LEU
355
C
MET
356
n
95
MET
356
C
CYS
357
n
96
CYS
357
C
GLN
358
n
97
GLN
358
C
PHE
359
n
98
PHE
359
C
GLY
360
n
99
GLY
360
C
LEU
361
n
100
LEU
361
C
PRO
362
n
101
PRO
362
C
ALA
363
n
102
ALA
363
C
GLU
364
n
103
GLU
364
C
ALA
365
n
104
ALA
365
C
VAL
366
n
105
VAL
366
C
GLU
367
n
106
GLU
367
C
ALA
368
n
107
ALA
368
C
ALA
369
n
108
ALA
369
C
ASN
370
n
109
ASN
370
C
LYS
371
n
110
LYS
371
C
GLY
372
n
111
GLY
372
C
ASP
373
n
112
ASP
373
C
VAL
374
n
113
VAL
374
C
GLU
375
n
114
GLU
375
C
ALA
376
n
115
ALA
376
C
PHE
377
n
116
PHE
377
C
ALA
378
n
117
ALA
378
C
LYS
379
n
118
LYS
379
C
ALA
380
n
119
ALA
380
C
MET
381
n
120
MET
381
C
GLN
382
n
121
GLN
382
C
ASN
383
n
122
ASN
383
C
ASN
384
n
123
ASN
384
C
n
124
385
C
n
125
386
C
n
126
387
C
n
127
388
C
1.3230
-0.3286
-0.5495
1.4534
0.3445
1.4525
-0.0639
-0.0564
0.0045
-0.0298
0.0338
-0.0396
0.1174
0.0702
0.0301
0.1306
0.0252
-0.0007
0.0793
-0.0182
0.0229
refined
-0.1700
97.4860
30.2110
X-RAY DIFFRACTION
3.7160
-3.6527
1.9919
6.4542
-2.5644
1.2248
-0.0045
0.1630
0.0947
0.0251
-0.1083
-0.2318
-0.0776
0.0811
0.1127
0.3732
0.0026
-0.0176
0.2614
-0.0241
0.0664
refined
4.1750
89.9760
6.6730
X-RAY DIFFRACTION
5.0140
-3.6447
3.2168
2.7039
-2.3703
2.1472
0.2635
0.5891
-0.3876
-0.0772
-0.2784
0.2348
0.0673
0.3989
0.0149
0.9239
-0.0741
0.1773
0.7959
-0.0019
1.1441
refined
36.3110
78.6350
14.8550
X-RAY DIFFRACTION
2.2142
0.1824
-1.2345
2.5717
-0.8970
3.6940
0.0318
0.0181
0.1706
-0.2648
0.0368
-0.2127
-0.0290
0.3038
-0.0685
0.1585
-0.0072
0.0316
0.1096
-0.0140
0.1023
refined
19.8180
97.3460
11.9730
X-RAY DIFFRACTION
10.3175
1.7329
0.8509
0.4522
-0.7369
5.2650
-0.0507
-0.0457
0.9937
0.0265
-0.2630
0.0574
-0.2733
1.3812
0.3137
0.6208
-0.0574
0.0606
0.5308
-0.0013
0.7619
refined
23.5020
73.5720
7.0550
X-RAY DIFFRACTION
1.6690
0.1524
0.7421
5.6850
-0.8717
2.4423
0.1204
0.0208
-0.0228
-0.1824
-0.1262
-0.3610
-0.0552
0.0319
0.0058
0.0714
-0.0156
0.0319
0.0936
-0.0070
0.0871
refined
15.0980
71.7320
14.7480
X-RAY DIFFRACTION
9.9702
-0.5523
-6.8067
0.2668
0.7993
16.5324
-0.4380
0.1272
0.2899
0.2606
-0.0954
-0.4708
0.3704
0.4360
0.5335
0.4375
-0.0037
-0.4456
0.3764
0.2261
1.1623
refined
29.9080
62.1870
20.6650
X-RAY DIFFRACTION
A
6
A
228
X-RAY DIFFRACTION
1
A
229
A
315
X-RAY DIFFRACTION
2
A
316
A
320
X-RAY DIFFRACTION
3
B
1
B
75
X-RAY DIFFRACTION
4
C
287
C
307
X-RAY DIFFRACTION
5
C
308
C
363
X-RAY DIFFRACTION
6
C
364
C
384
X-RAY DIFFRACTION
7
author_and_software_defined_assembly
PISA
3
trimeric
7220
-50.2
22270
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
MET
11
A
N
MET
14
B
O
GLY
75
B
O
GLY
75
A
N
ILE
35
A
N
ILE
38
A
O
LEU
220
A
O
LEU
223
A
O
ILE
223
A
O
ILE
226
A
N
HIS
50
A
N
HIS
53
A
N
PHE
56
A
N
PHE
59
A
O
HIS
164
A
O
HIS
167
A
N
VAL
171
A
N
VAL
174
A
O
ARG
174
A
O
ARG
177
A
N
GLU
177
A
N
GLU
180
A
O
ILE
186
A
O
ILE
189
A
N
ASP
187
A
N
ASP
190
A
O
SER
67
A
O
SER
70
B
N
LEU
15
B
N
LEU
15
B
O
ILE
3
B
O
ILE
3
B
N
LYS
6
B
N
LYS
6
B
O
LEU
67
B
O
LEU
67
B
N
VAL
70
B
N
VAL
70
B
O
ARG
42
B
O
ARG
42
B
N
PHE
45
B
N
PHE
45
B
O
LYS
48
B
O
LYS
48
1
A
GLY
-2
A
GLY
1
1
Y
1
A
PRO
-1
A
PRO
2
1
Y
1
A
GLY
0
A
GLY
3
1
Y
1
A
MET
1
A
MET
4
1
Y
1
A
THR
2
A
THR
5
1
Y
1
A
GLY
3
A
GLY
6
1
Y
1
A
ASN
4
A
ASN
7
1
Y
1
A
ALA
5
A
ALA
8
1
Y
1
A
LYS
154
A
LYS
157
1
Y
1
A
THR
155
A
THR
158
1
Y
1
A
SER
156
A
SER
159
1
Y
1
A
ALA
157
A
ALA
160
1
Y
1
A
LYS
158
A
LYS
161
1
Y
1
A
GLU
159
A
GLU
162
1
Y
1
A
PRO
246
A
PRO
249
1
Y
1
A
MET
247
A
MET
250
1
Y
1
A
ASP
248
A
ASP
251
1
Y
1
A
THR
249
A
THR
252
1
Y
1
A
ASP
250
A
ASP
253
1
Y
1
A
GLN
251
A
GLN
254
1
Y
1
A
GLY
252
A
GLY
255
1
Y
1
A
ALA
321
A
ALA
324
1
Y
1
A
LYS
322
A
LYS
325
1
Y
1
A
LYS
323
A
LYS
326
1
Y
1
A
ALA
324
A
ALA
327
1
Y
1
A
GLN
325
A
GLN
328
1
Y
1
A
GLU
326
A
GLU
329
1
Y
1
A
THR
327
A
THR
330
1
Y
1
A
LYS
328
A
LYS
331
1
Y
1
C
GLY
262
C
GLY
1
1
Y
1
C
PRO
263
C
PRO
2
1
Y
1
C
GLY
264
C
GLY
3
1
Y
1
C
SER
265
C
SER
4
1
Y
1
C
ASP
266
C
ASP
5
1
Y
1
C
LEU
267
C
LEU
6
1
Y
1
C
GLN
268
C
GLN
7
1
Y
1
C
SER
269
C
SER
8
1
Y
1
C
ILE
270
C
ILE
9
1
Y
1
C
LEU
271
C
LEU
10
1
Y
1
C
ALA
272
C
ALA
11
1
Y
1
C
THR
273
C
THR
12
1
Y
1
C
MET
274
C
MET
13
1
Y
1
C
ASN
275
C
ASN
14
1
Y
1
C
VAL
276
C
VAL
15
1
Y
1
C
PRO
277
C
PRO
16
1
Y
1
C
ALA
278
C
ALA
17
1
Y
1
C
GLY
279
C
GLY
18
1
Y
1
C
PRO
280
C
PRO
19
1
Y
1
C
ALA
281
C
ALA
20
1
Y
1
C
GLY
282
C
GLY
21
1
Y
1
C
GLY
283
C
GLY
22
1
Y
1
C
GLN
284
C
GLN
23
1
Y
1
C
GLN
285
C
GLN
24
1
Y
1
C
VAL
286
C
VAL
25
1
Y
1
C
ALA
385
C
ALA
124
1
Y
1
C
LYS
386
C
LYS
125
1
Y
1
C
PRO
387
C
PRO
126
1
Y
1
C
GLU
388
C
GLU
127
1
Y
1
A
GLU
7
-97.18
-63.79
1
A
MET
148
64.80
-57.34
1
A
ASP
195
-161.25
75.29
41.613
2.65
0.00
0.00
-0.63
0.00
-2.03
0.951
0.921
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.23426
0.19141
0.19365
2.30
70.28
1354
25531
5.0
99.74
15.370
0.185
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.290
0.217
0.70
0.70
1.00
MAXIMUM LIKELIHOOD
MASK
2.30
70.28
234
3996
0
0
3762
0.005
0.019
3830
0.001
0.020
3717
0.993
1.970
5169
0.683
3.000
8570
5.084
5.000
472
38.060
25.668
187
13.323
15.000
706
15.080
15.000
19
0.055
0.200
578
0.004
0.021
4350
0.001
0.020
849
2.932
1.877
1897
2.933
1.877
1896
4.278
2.799
2363
4.021
2.273
1933
0.276
0.286
2.356
97
1827
20
98.36
2.30
45.34
4UEL
26979
1.6
0.13
1
9.70
4.1
99.8
0.83
2.30
2.38
1.60
1
4.1
98.9
refinement
REFMAC
5.8.0073
data reduction
XDS
data scaling
Aimless
phasing
PHASER
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE ISOZYME L5 (E.C.3.4.19.12), POLYUBIQUITIN-B, PROTEASOMAL UBIQUITIN RECEPTOR ADRM1
UCH-L5 in complex with ubiquitin-propargyl bound to the RPN13 DEUBAD domain
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
A
ASP
14
A
ASP
17
HELX_P
A
GLY
26
A
GLY
29
1
1
13
A
PRO
40
A
PRO
43
HELX_P
A
LYS
45
A
LYS
48
1
2
6
A
ASP
71
A
ASP
74
HELX_P
A
THR
76
A
THR
79
5
3
6
A
ALA
87
A
ALA
90
HELX_P
A
LEU
98
A
LEU
101
1
4
12
A
LEU
107
A
LEU
110
HELX_P
A
GLN
119
A
GLN
122
1
5
13
A
ASP
122
A
ASP
125
HELX_P
A
ASN
132
A
ASN
135
1
6
11
A
SER
133
A
SER
136
HELX_P
A
SER
142
A
SER
145
1
7
10
A
TRP
196
A
TRP
199
HELX_P
A
LYS
210
A
LYS
213
1
8
15
A
ASP
226
A
ASP
229
HELX_P
A
GLU
245
A
GLU
248
1
9
20
A
ASN
253
A
ASN
256
HELX_P
A
HIS
289
A
HIS
292
1
10
37
A
TYR
291
A
TYR
294
HELX_P
A
HIS
305
A
HIS
308
1
11
15
A
GLN
307
A
GLN
310
HELX_P
A
LYS
318
A
LYS
321
1
12
12
B
THR
22
B
THR
22
HELX_P
B
GLY
35
B
GLY
35
1
13
14
B
PRO
37
B
PRO
37
HELX_P
B
ASP
39
B
ASP
39
5
14
3
B
LEU
56
B
LEU
56
HELX_P
B
ASN
60
B
ASN
60
5
15
5
C
ASP
287
C
ASP
26
HELX_P
C
LEU
292
C
LEU
31
1
16
6
C
PRO
294
C
PRO
33
HELX_P
C
ILE
296
C
ILE
35
5
17
3
C
MET
297
C
MET
36
HELX_P
C
ALA
302
C
ALA
41
1
18
6
C
ASN
303
C
ASN
42
HELX_P
C
LEU
311
C
LEU
50
1
19
9
C
PRO
312
C
PRO
51
HELX_P
C
LEU
314
C
LEU
53
5
20
3
C
THR
323
C
THR
62
HELX_P
C
ASP
325
C
ASP
64
5
21
3
C
GLU
326
C
GLU
65
HELX_P
C
THR
332
C
THR
71
1
22
7
C
SER
333
C
SER
72
HELX_P
C
SER
349
C
SER
88
1
23
17
C
LEU
352
C
LEU
91
HELX_P
C
PHE
359
C
PHE
98
1
24
8
C
PRO
362
C
PRO
101
HELX_P
C
GLY
372
C
GLY
111
1
25
11
C
ASP
373
C
ASP
112
HELX_P
C
ASN
384
C
ASN
123
1
26
12
covale
1.332
one
B
GLY
75
B
C
GLY
75
1_555
B
AYE
76
B
N1
AYE
76
1_555
covale
1.675
none
B
AYE
76
B
C2
AYE
76
1_555
A
CYS
88
A
SG
CYS
91
1_555
HYDROLASE
HYDROLASE, DEUBIQUITINATING ENZYME, DUB, UCH37, UCHL5, PROTEASOME, ADRM1, RPN13, DEUBAD, UCH, UBIQUITIN-PROPARGYL
A
LYS
47
A
LYS
50
1
A
PRO
48
A
PRO
51
2.84
UCHL5_HUMAN
UNP
1
Q9Y5K5
UBB_HUMAN
UNP
2
P0CG47
ADRM1_HUMAN
UNP
3
Q16186
1
328
4UEL
1
328
Q9Y5K5
A
1
4
331
1
76
4UEL
1
76
P0CG47
B
2
1
76
266
388
4UEL
266
388
Q16186
C
3
5
127
1
expression tag
GLY
-2
4UEL
A
Q9Y5K5
UNP
1
1
expression tag
PRO
-1
4UEL
A
Q9Y5K5
UNP
2
1
expression tag
GLY
0
4UEL
A
Q9Y5K5
UNP
3
2
GLY
engineered mutation
AYE
76
4UEL
B
P0CG47
UNP
76
76
3
expression tag
GLY
262
4UEL
C
Q16186
UNP
1
3
expression tag
PRO
263
4UEL
C
Q16186
UNP
2
3
expression tag
GLY
264
4UEL
C
Q16186
UNP
3
3
expression tag
SER
265
4UEL
C
Q16186
UNP
4
2
7
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
MET
11
A
MET
14
A
GLU
12
A
GLU
15
B
ARG
74
B
ARG
74
B
GLY
75
B
GLY
75
A
ALA
30
A
ALA
33
A
ILE
35
A
ILE
38
A
ASN
219
A
ASN
222
A
SER
225
A
SER
228
A
VAL
49
A
VAL
52
A
LYS
57
A
LYS
60
A
PHE
163
A
PHE
166
A
VAL
171
A
VAL
174
A
ARG
174
A
ARG
177
A
LEU
178
A
LEU
181
A
ILE
186
A
ILE
189
A
ALA
190
A
ALA
193
A
SER
67
A
SER
70
A
VAL
68
A
VAL
71
B
THR
12
B
THR
12
B
GLU
16
B
GLU
16
B
GLN
2
B
GLN
2
B
LYS
6
B
LYS
6
B
THR
66
B
THR
66
B
LEU
71
B
LEU
71
B
GLN
41
B
GLN
41
B
PHE
45
B
PHE
45
B
LYS
48
B
LYS
48
B
GLN
49
B
GLN
49
19
P 21 21 21