0.025591 0.000000 0.000000 0.000000 0.015227 0.000000 0.000000 0.000000 0.009462 0.00000 0.00000 0.00000 Chee, S. Wongsantichon, J. Quah, S. Robinson, R.C. Verma, C. Lane, D.P. Brown, C.J. Ghadessy, F.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 39.076 65.674 105.683 C10 H21 N O2 187.279 (2R)-2-amino-2-methylnonanoic acid D-peptide linking C2 H4 O 44.053 ACETYL GROUP non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C7 H15 N O2 145.199 n 2-methyl-L-norleucine L-peptide linking H2 N 16.023 AMINO GROUP non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O N 2 N C N 3 R C N 4 N C N 5 N C N 6 N N N 7 N C N 8 N C N 9 N C N 10 N C N 11 N C N 12 N C N 13 N H N 14 N H N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N H N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N O N 34 N H N 35 N C N 36 N O N 37 N C N 38 N H N 39 N H N 40 N H N 41 N H N 42 N N N 43 S C N 44 N C N 45 N O N 46 N C N 47 N O N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N N N 56 S C N 57 N C N 58 N O N 59 N C N 60 N C N 61 N C N 62 N N N 63 N C N 64 N N N 65 N N N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N N N 83 S C N 84 N C N 85 N O N 86 N C N 87 N C N 88 N O N 89 N N N 90 N O N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N N N 100 S C N 101 N C N 102 N O N 103 N C N 104 N C N 105 N O N 106 N O N 107 N O N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N N N 116 R C N 117 N C N 118 N O N 119 N C N 120 N S N 121 N O N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N N N 130 S C N 131 N C N 132 N O N 133 N C N 134 N C N 135 N C N 136 N O N 137 N N N 138 N O N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N N N 150 S C N 151 N C N 152 N O N 153 N C N 154 N C N 155 N C N 156 N O N 157 N O N 158 N O N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N N N 169 N C N 170 N C N 171 N O N 172 N O N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N N N 179 S C N 180 N C N 181 N O N 182 N C Y 183 N C Y 184 N N Y 185 N C Y 186 N C Y 187 N N N 188 N O N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N O N 200 N H N 201 N H N 202 N N N 203 S C N 204 N C N 205 N O N 206 S C N 207 N C N 208 N C N 209 N C N 210 N O N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N N N 225 S C N 226 N C N 227 N O N 228 N C N 229 N C N 230 N C N 231 N C N 232 N O N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N N N 247 S C N 248 N C N 249 N O N 250 N C N 251 N C N 252 N C N 253 N C N 254 N N N 255 N O N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 S C N 273 N C N 274 N O N 275 N C N 276 N C N 277 N S N 278 N C N 279 N O N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N C N 292 N N N 293 N O N 294 S C N 295 N C N 296 N C N 297 N C N 298 N C N 299 N C N 300 N O N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N N N 317 N H N 318 N H N 319 N N N 320 S C N 321 N C N 322 N O N 323 N C Y 324 N C Y 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N C N 330 N O N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N N N 343 S C N 344 N C N 345 N O N 346 N C N 347 N C N 348 N C N 349 N O N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C N 364 N O N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 R C N 378 N O N 379 N C N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N N N 391 S C N 392 N C N 393 N O N 394 N C Y 395 N C Y 396 N C Y 397 N C Y 398 N N Y 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C N 404 N O N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N N N 418 S C N 419 N C N 420 N O N 421 N C Y 422 N C Y 423 N C Y 424 N C Y 425 N C Y 426 N C Y 427 N C N 428 N O N 429 N O N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N N N 442 S C N 443 N C N 444 N O N 445 N C N 446 N C N 447 N C N 448 N O N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 1 N sing N 2 N doub N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N doub N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N doub N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N doub Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N doub N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N doub N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N doub N 309 N sing N 310 N sing N 311 N sing N 312 N sing Y 313 N doub Y 314 N sing Y 315 N sing N 316 N sing Y 317 N doub N 318 N sing Y 319 N doub N 320 N sing Y 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N doub N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N doub N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N doub N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N doub N 378 N sing N 379 N sing N 380 N sing N 381 N sing Y 382 N doub Y 383 N sing Y 384 N sing N 385 N sing Y 386 N doub Y 387 N sing Y 388 N sing N 389 N sing Y 390 N sing Y 391 N doub N 392 N sing Y 393 N doub N 394 N sing Y 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N doub N 406 N sing N 407 N sing N 408 N sing N 409 N sing Y 410 N doub Y 411 N sing Y 412 N sing N 413 N sing Y 414 N doub N 415 N sing Y 416 N doub N 417 N sing Y 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N doub N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing US PLoS ONE 1932-6203 9 e104914 e104914 10.1371/journal.pone.0104914 25115702 Structure of a stapled peptide antagonist bound to nutlin-resistant Mdm2. 2014 10.2210/pdb4umn/pdb pdb_00004umn 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 2014-04-07 SINGLE WAVELENGTH M x-ray 1 1.0 1.0 NSRRC 1.0 SYNCHROTRON NSRRC 13535.410 E3 ubiquitin-protein ligase Mdm2 2.3.2.27 P53 BINDING DOMAIN, RESIDUES 6-125 YES 2 man polymer 1541.850 M06 MDM2 INTERACTING PEPTIDE, RESIDUES 17-27 2 syn polymer 18.015 water 85 nat water Double minute 2 protein,Hdm2,Oncoprotein Mdm2,RING-type E3 ubiquitin transferase Mdm2,p53-binding protein Mdm2 no no MSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIATKRLYDEKQQHIVYCSNDLLGDL FGVPSFSVKEHRKIYTMIYRNLVVVNQQESSDSGTSVSEN MSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIATKRLYDEKQQHIVYCSNDLLGDL FGVPSFSVKEHRKIYTMIYRNLVVVNQQESSDSGTSVSEN A,B polypeptide(L) no yes (ACE)TSF(0EH)EYWYLL(MK8)(NH2) XTSFXEYWYLLLX C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample 1 120 MDM2 9606 Homo sapiens 469008 ESCHERICHIA COLI BL21(DE3) PGEX-6-P-1 PLASMID Biological sequence PGEX-6-P-1(MDM2-6-125) 1 2.42 49.24 NONE VAPOR DIFFUSION, SITTING DROP 6.4 0.04 M CITRIC ACID, 0.06 M BIS-TRIS PROPANE PH 6.4, AND 20% PEG 3350 289 citation citation_author exptl_crystal_grow pdbx_database_status reflns reflns_shell struct_conn atom_site atom_site_anisotrop chem_comp database_2 entity entity_name_com entity_poly entity_poly_seq entity_src_gen pdbx_entity_src_syn pdbx_poly_seq_scheme struct_conn struct_ref struct_ref_seq struct_ref_seq_dif atom_site atom_site_anisotrop chem_comp_atom chem_comp_bond struct_conn pdbx_initial_refinement_model repository Initial release Atomic model Other Database references Database references Data collection Derived calculations Experimental preparation Other Atomic model Database references Derived calculations Non-polymer description Polymer sequence Source and taxonomy Structure summary Atomic model Data collection Derived calculations Refinement description 1 0 2014-05-28 1 1 2014-07-16 1 2 2014-08-27 1 3 2017-08-09 1 4 2019-10-16 2 0 2023-03-15 3 0 2023-11-15 3 1 2024-02-07 _citation.journal_abbrev _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.title _citation.year _citation_author.name _exptl_crystal_grow.method _exptl_crystal_grow.temp _pdbx_database_status.status_code_sf _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs _struct_conn.pdbx_leaving_atom_flag _atom_site.auth_comp_id _atom_site.label_comp_id _atom_site_anisotrop.pdbx_auth_comp_id _atom_site_anisotrop.pdbx_label_comp_id _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _entity.formula_weight _entity.pdbx_description _entity.pdbx_ec _entity_name_com.name _entity_poly.pdbx_seq_one_letter_code _entity_poly_seq.mon_id _entity_src_gen.gene_src_common_name _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_seq_type _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_mon_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq_dif.details _atom_site.auth_atom_id _atom_site.label_atom_id _atom_site_anisotrop.pdbx_auth_atom_id _atom_site_anisotrop.pdbx_label_atom_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr2_label_atom_id PDBE Y PDBE 2014-05-20 REL REL HOH water 32630 SYNTHETIC CONSTRUCT sample 1 13 METHYLAMINE (NME): AMIDATION OF C-TERMINAL RESIDUE IN CHAINS C AND D. 2AXI PDB ENTRY 2AXI PDB experimental model HOH 2001 3 HOH HOH 2001 A HOH 2002 3 HOH HOH 2002 A HOH 2003 3 HOH HOH 2003 A HOH 2004 3 HOH HOH 2004 A HOH 2005 3 HOH HOH 2005 A HOH 2006 3 HOH HOH 2006 A HOH 2007 3 HOH HOH 2007 A HOH 2008 3 HOH HOH 2008 A HOH 2009 3 HOH HOH 2009 A HOH 2010 3 HOH HOH 2010 A HOH 2011 3 HOH HOH 2011 A HOH 2012 3 HOH HOH 2012 A HOH 2013 3 HOH HOH 2013 A HOH 2014 3 HOH HOH 2014 A HOH 2015 3 HOH HOH 2015 A HOH 2016 3 HOH HOH 2016 A HOH 2017 3 HOH HOH 2017 A HOH 2018 3 HOH HOH 2018 A HOH 2019 3 HOH HOH 2019 A HOH 2020 3 HOH HOH 2020 A HOH 2021 3 HOH HOH 2021 A HOH 2022 3 HOH HOH 2022 A HOH 2023 3 HOH HOH 2023 A HOH 2024 3 HOH HOH 2024 A HOH 2025 3 HOH HOH 2025 A HOH 2026 3 HOH HOH 2026 A HOH 2027 3 HOH HOH 2027 A HOH 2028 3 HOH HOH 2028 A HOH 2029 3 HOH HOH 2029 A HOH 2030 3 HOH HOH 2030 A HOH 2031 3 HOH HOH 2031 A HOH 2032 3 HOH HOH 2032 A HOH 2033 3 HOH HOH 2033 A HOH 2034 3 HOH HOH 2034 A HOH 2035 3 HOH HOH 2035 A HOH 2036 3 HOH HOH 2036 A HOH 2001 3 HOH HOH 2001 B HOH 2002 3 HOH HOH 2002 B HOH 2003 3 HOH HOH 2003 B HOH 2004 3 HOH HOH 2004 B HOH 2005 3 HOH HOH 2005 B HOH 2006 3 HOH HOH 2006 B HOH 2007 3 HOH HOH 2007 B HOH 2008 3 HOH HOH 2008 B HOH 2009 3 HOH HOH 2009 B HOH 2010 3 HOH HOH 2010 B HOH 2011 3 HOH HOH 2011 B HOH 2012 3 HOH HOH 2012 B HOH 2013 3 HOH HOH 2013 B HOH 2014 3 HOH HOH 2014 B HOH 2015 3 HOH HOH 2015 B HOH 2016 3 HOH HOH 2016 B HOH 2017 3 HOH HOH 2017 B HOH 2018 3 HOH HOH 2018 B HOH 2019 3 HOH HOH 2019 B HOH 2020 3 HOH HOH 2020 B HOH 2021 3 HOH HOH 2021 B HOH 2022 3 HOH HOH 2022 B HOH 2023 3 HOH HOH 2023 B HOH 2024 3 HOH HOH 2024 B HOH 2025 3 HOH HOH 2025 B HOH 2026 3 HOH HOH 2026 B HOH 2027 3 HOH HOH 2027 B HOH 2028 3 HOH HOH 2028 B HOH 2029 3 HOH HOH 2029 B HOH 2030 3 HOH HOH 2030 B HOH 2031 3 HOH HOH 2031 B HOH 2032 3 HOH HOH 2032 B HOH 2033 3 HOH HOH 2033 B HOH 2034 3 HOH HOH 2034 B HOH 2035 3 HOH HOH 2035 B HOH 2036 3 HOH HOH 2036 B HOH 2037 3 HOH HOH 2037 B HOH 2038 3 HOH HOH 2038 B HOH 2039 3 HOH HOH 2039 B HOH 2040 3 HOH HOH 2040 B HOH 2041 3 HOH HOH 2041 B HOH 2042 3 HOH HOH 2042 B HOH 2043 3 HOH HOH 2043 B HOH 2001 3 HOH HOH 2001 C HOH 2002 3 HOH HOH 2002 C HOH 2003 3 HOH HOH 2003 C HOH 2004 3 HOH HOH 2004 C HOH 2005 3 HOH HOH 2005 C HOH 2001 3 HOH HOH 2001 D n 1 6 A n 2 7 A n 3 8 A n 4 9 A n 5 10 A n 6 11 A n 7 12 A n 8 13 A n 9 14 A n 10 15 A n 11 16 A n 12 17 A GLN 18 n 13 GLN 18 A ILE 19 n 14 ILE 19 A PRO 20 n 15 PRO 20 A ALA 21 n 16 ALA 21 A SER 22 n 17 SER 22 A GLU 23 n 18 GLU 23 A GLN 24 n 19 GLN 24 A GLU 25 n 20 GLU 25 A THR 26 n 21 THR 26 A LEU 27 n 22 LEU 27 A VAL 28 n 23 VAL 28 A ARG 29 n 24 ARG 29 A PRO 30 n 25 PRO 30 A LYS 31 n 26 LYS 31 A PRO 32 n 27 PRO 32 A LEU 33 n 28 LEU 33 A LEU 34 n 29 LEU 34 A LEU 35 n 30 LEU 35 A LYS 36 n 31 LYS 36 A LEU 37 n 32 LEU 37 A LEU 38 n 33 LEU 38 A LYS 39 n 34 LYS 39 A SER 40 n 35 SER 40 A VAL 41 n 36 VAL 41 A GLY 42 n 37 GLY 42 A ALA 43 n 38 ALA 43 A GLN 44 n 39 GLN 44 A LYS 45 n 40 LYS 45 A ASP 46 n 41 ASP 46 A THR 47 n 42 THR 47 A TYR 48 n 43 TYR 48 A THR 49 n 44 THR 49 A MET 50 n 45 MET 50 A LYS 51 n 46 LYS 51 A GLU 52 n 47 GLU 52 A VAL 53 n 48 VAL 53 A LEU 54 n 49 LEU 54 A PHE 55 n 50 PHE 55 A TYR 56 n 51 TYR 56 A LEU 57 n 52 LEU 57 A GLY 58 n 53 GLY 58 A GLN 59 n 54 GLN 59 A TYR 60 n 55 TYR 60 A ILE 61 n 56 ILE 61 A ALA 62 n 57 ALA 62 A THR 63 n 58 THR 63 A LYS 64 n 59 LYS 64 A ARG 65 n 60 ARG 65 A LEU 66 n 61 LEU 66 A TYR 67 n 62 TYR 67 A ASP 68 n 63 ASP 68 A GLU 69 n 64 GLU 69 A LYS 70 n 65 LYS 70 A GLN 71 n 66 GLN 71 A GLN 72 n 67 GLN 72 A HIS 73 n 68 HIS 73 A ILE 74 n 69 ILE 74 A VAL 75 n 70 VAL 75 A TYR 76 n 71 TYR 76 A CYS 77 n 72 CYS 77 A SER 78 n 73 SER 78 A ASN 79 n 74 ASN 79 A ASP 80 n 75 ASP 80 A LEU 81 n 76 LEU 81 A LEU 82 n 77 LEU 82 A GLY 83 n 78 GLY 83 A ASP 84 n 79 ASP 84 A LEU 85 n 80 LEU 85 A PHE 86 n 81 PHE 86 A GLY 87 n 82 GLY 87 A VAL 88 n 83 VAL 88 A PRO 89 n 84 PRO 89 A SER 90 n 85 SER 90 A PHE 91 n 86 PHE 91 A SER 92 n 87 SER 92 A VAL 93 n 88 VAL 93 A LYS 94 n 89 LYS 94 A GLU 95 n 90 GLU 95 A HIS 96 n 91 HIS 96 A ARG 97 n 92 ARG 97 A LYS 98 n 93 LYS 98 A ILE 99 n 94 ILE 99 A TYR 100 n 95 TYR 100 A THR 101 n 96 THR 101 A MET 102 n 97 MET 102 A ILE 103 n 98 ILE 103 A TYR 104 n 99 TYR 104 A ARG 105 n 100 ARG 105 A ASN 106 n 101 ASN 106 A LEU 107 n 102 LEU 107 A VAL 108 n 103 VAL 108 A VAL 109 n 104 VAL 109 A VAL 110 n 105 VAL 110 A ASN 111 n 106 ASN 111 A GLN 112 n 107 GLN 112 A n 108 113 A n 109 114 A n 110 115 A n 111 116 A n 112 117 A n 113 118 A n 114 119 A n 115 120 A n 116 121 A n 117 122 A n 118 123 A n 119 124 A n 120 125 A n 1 6 B n 2 7 B n 3 8 B n 4 9 B n 5 10 B n 6 11 B n 7 12 B n 8 13 B n 9 14 B n 10 15 B n 11 16 B n 12 17 B GLN 18 n 13 GLN 18 B ILE 19 n 14 ILE 19 B PRO 20 n 15 PRO 20 B ALA 21 n 16 ALA 21 B SER 22 n 17 SER 22 B GLU 23 n 18 GLU 23 B GLN 24 n 19 GLN 24 B GLU 25 n 20 GLU 25 B THR 26 n 21 THR 26 B LEU 27 n 22 LEU 27 B VAL 28 n 23 VAL 28 B ARG 29 n 24 ARG 29 B PRO 30 n 25 PRO 30 B LYS 31 n 26 LYS 31 B PRO 32 n 27 PRO 32 B LEU 33 n 28 LEU 33 B LEU 34 n 29 LEU 34 B LEU 35 n 30 LEU 35 B LYS 36 n 31 LYS 36 B LEU 37 n 32 LEU 37 B LEU 38 n 33 LEU 38 B LYS 39 n 34 LYS 39 B SER 40 n 35 SER 40 B VAL 41 n 36 VAL 41 B GLY 42 n 37 GLY 42 B ALA 43 n 38 ALA 43 B GLN 44 n 39 GLN 44 B LYS 45 n 40 LYS 45 B ASP 46 n 41 ASP 46 B THR 47 n 42 THR 47 B TYR 48 n 43 TYR 48 B THR 49 n 44 THR 49 B MET 50 n 45 MET 50 B LYS 51 n 46 LYS 51 B GLU 52 n 47 GLU 52 B VAL 53 n 48 VAL 53 B LEU 54 n 49 LEU 54 B PHE 55 n 50 PHE 55 B TYR 56 n 51 TYR 56 B LEU 57 n 52 LEU 57 B GLY 58 n 53 GLY 58 B GLN 59 n 54 GLN 59 B TYR 60 n 55 TYR 60 B ILE 61 n 56 ILE 61 B ALA 62 n 57 ALA 62 B THR 63 n 58 THR 63 B LYS 64 n 59 LYS 64 B ARG 65 n 60 ARG 65 B LEU 66 n 61 LEU 66 B TYR 67 n 62 TYR 67 B ASP 68 n 63 ASP 68 B GLU 69 n 64 GLU 69 B LYS 70 n 65 LYS 70 B GLN 71 n 66 GLN 71 B GLN 72 n 67 GLN 72 B HIS 73 n 68 HIS 73 B ILE 74 n 69 ILE 74 B VAL 75 n 70 VAL 75 B TYR 76 n 71 TYR 76 B CYS 77 n 72 CYS 77 B SER 78 n 73 SER 78 B ASN 79 n 74 ASN 79 B ASP 80 n 75 ASP 80 B LEU 81 n 76 LEU 81 B LEU 82 n 77 LEU 82 B GLY 83 n 78 GLY 83 B ASP 84 n 79 ASP 84 B LEU 85 n 80 LEU 85 B PHE 86 n 81 PHE 86 B GLY 87 n 82 GLY 87 B VAL 88 n 83 VAL 88 B PRO 89 n 84 PRO 89 B SER 90 n 85 SER 90 B PHE 91 n 86 PHE 91 B SER 92 n 87 SER 92 B VAL 93 n 88 VAL 93 B LYS 94 n 89 LYS 94 B GLU 95 n 90 GLU 95 B HIS 96 n 91 HIS 96 B ARG 97 n 92 ARG 97 B LYS 98 n 93 LYS 98 B ILE 99 n 94 ILE 99 B TYR 100 n 95 TYR 100 B THR 101 n 96 THR 101 B MET 102 n 97 MET 102 B ILE 103 n 98 ILE 103 B TYR 104 n 99 TYR 104 B ARG 105 n 100 ARG 105 B ASN 106 n 101 ASN 106 B LEU 107 n 102 LEU 107 B VAL 108 n 103 VAL 108 B VAL 109 n 104 VAL 109 B VAL 110 n 105 VAL 110 B n 106 111 B n 107 112 B n 108 113 B n 109 114 B n 110 115 B n 111 116 B n 112 117 B n 113 118 B n 114 119 B n 115 120 B n 116 121 B n 117 122 B n 118 123 B n 119 124 B n 120 125 B ACE 16 n 1 ACE 16 C THR 17 n 2 THR 17 C SER 18 n 3 SER 18 C PHE 19 n 4 PHE 19 C 0EH 20 n 5 0EH 20 C GLU 21 n 6 GLU 21 C TYR 22 n 7 TYR 22 C TRP 23 n 8 TRP 23 C TYR 24 n 9 TYR 24 C LEU 25 n 10 LEU 25 C LEU 26 n 11 LEU 26 C MK8 27 n 12 MK8 27 C NME 28 n 13 NH2 28 C ACE 16 n 1 ACE 16 D THR 17 n 2 THR 17 D SER 18 n 3 SER 18 D PHE 19 n 4 PHE 19 D 0EH 20 n 5 0EH 20 D GLU 21 n 6 GLU 21 D TYR 22 n 7 TYR 22 D TRP 23 n 8 TRP 23 D TYR 24 n 9 TYR 24 D LEU 25 n 10 LEU 25 D LEU 26 n 11 LEU 26 D MK8 27 n 12 MK8 27 D NME 28 n 13 NH2 28 D 8.6295 4.3580 -2.2466 9.2044 -0.6127 3.9306 0.0522 0.1104 0.3432 -0.4770 -0.2466 -0.0645 -0.0740 -0.1365 0.1944 0.3786 0.0631 -0.0469 0.1143 0.0227 0.0667 refined 4.0400 23.7613 111.8238 X-RAY DIFFRACTION 1.3830 -1.2857 0.0787 4.6729 -1.7224 4.2031 0.0509 0.0577 -0.0980 -0.3774 -0.1643 -0.1949 0.0753 0.1508 0.1135 0.1700 0.0211 -0.0277 0.0251 -0.0030 0.0511 refined 7.5175 14.9838 119.5812 X-RAY DIFFRACTION 3.3358 -0.8123 0.3453 5.1555 -0.3385 1.9698 -0.0059 -0.3026 -0.2515 0.3811 -0.0375 0.4489 -0.0523 -0.0753 0.0434 0.1213 0.0193 0.0055 0.0688 0.0016 0.1187 refined -8.2586 22.7696 135.9720 X-RAY DIFFRACTION 10.5322 2.8638 -5.8356 10.1356 -2.9138 7.1114 0.5718 0.2761 1.4827 1.5285 0.7795 2.7956 -0.9869 -1.0337 -1.3513 0.3755 0.2573 0.3649 0.2462 0.2217 0.9410 refined -8.2586 22.7696 135.9720 X-RAY DIFFRACTION 4.7983 -3.9963 -6.1581 8.1190 9.1901 11.3599 -1.2606 -0.3114 -0.8161 2.0931 -0.0085 0.9134 2.5098 0.2095 1.2691 0.7138 0.0558 0.2160 0.0971 0.1073 0.2685 refined -8.2586 22.7696 135.9720 X-RAY DIFFRACTION A 18 A 48 X-RAY DIFFRACTION 1 A 49 A 112 X-RAY DIFFRACTION 2 B 18 B 110 X-RAY DIFFRACTION 3 C 17 C 28 X-RAY DIFFRACTION 4 D 17 D 28 X-RAY DIFFRACTION 5 author_and_software_defined_assembly PISA 4 tetrameric 5560 -22.6 9650 C MK8 27 2-METHYL-L-NORLEUCINE C MK8 12 LEU D MK8 27 2-METHYL-L-NORLEUCINE D MK8 12 LEU 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TYR 48 A N TYR 43 A O VAL 28 A O VAL 23 A N ARG 29 A N ARG 24 A O VAL 108 A O VAL 103 A N VAL 75 A N VAL 70 A O PHE 91 A O PHE 86 B N TYR 48 B N TYR 43 B O VAL 28 B O VAL 23 B N ARG 29 B N ARG 24 B O VAL 108 B O VAL 103 B N VAL 75 B N VAL 70 B O PHE 91 B O PHE 86 1 A CG GLN 18 A CG GLN 13 1 Y 1 A CD GLN 18 A CD GLN 13 1 Y 1 A OE1 GLN 18 A OE1 GLN 13 1 Y 1 A NE2 GLN 18 A NE2 GLN 13 1 Y 1 B CG GLN 18 B CG GLN 13 1 Y 1 B CD GLN 18 B CD GLN 13 1 Y 1 B OE1 GLN 18 B OE1 GLN 13 1 Y 1 B NE2 GLN 18 B NE2 GLN 13 1 Y 1 A MET 6 A MET 1 1 Y 1 A SER 7 A SER 2 1 Y 1 A VAL 8 A VAL 3 1 Y 1 A PRO 9 A PRO 4 1 Y 1 A THR 10 A THR 5 1 Y 1 A ASP 11 A ASP 6 1 Y 1 A GLY 12 A GLY 7 1 Y 1 A ALA 13 A ALA 8 1 Y 1 A VAL 14 A VAL 9 1 Y 1 A THR 15 A THR 10 1 Y 1 A THR 16 A THR 11 1 Y 1 A SER 17 A SER 12 1 Y 1 A GLN 113 A GLN 108 1 Y 1 A GLU 114 A GLU 109 1 Y 1 A SER 115 A SER 110 1 Y 1 A SER 116 A SER 111 1 Y 1 A ASP 117 A ASP 112 1 Y 1 A SER 118 A SER 113 1 Y 1 A GLY 119 A GLY 114 1 Y 1 A THR 120 A THR 115 1 Y 1 A SER 121 A SER 116 1 Y 1 A VAL 122 A VAL 117 1 Y 1 A SER 123 A SER 118 1 Y 1 A GLU 124 A GLU 119 1 Y 1 A ASN 125 A ASN 120 1 Y 1 B MET 6 B MET 1 1 Y 1 B SER 7 B SER 2 1 Y 1 B VAL 8 B VAL 3 1 Y 1 B PRO 9 B PRO 4 1 Y 1 B THR 10 B THR 5 1 Y 1 B ASP 11 B ASP 6 1 Y 1 B GLY 12 B GLY 7 1 Y 1 B ALA 13 B ALA 8 1 Y 1 B VAL 14 B VAL 9 1 Y 1 B THR 15 B THR 10 1 Y 1 B THR 16 B THR 11 1 Y 1 B SER 17 B SER 12 1 Y 1 B ASN 111 B ASN 106 1 Y 1 B GLN 112 B GLN 107 1 Y 1 B GLN 113 B GLN 108 1 Y 1 B GLU 114 B GLU 109 1 Y 1 B SER 115 B SER 110 1 Y 1 B SER 116 B SER 111 1 Y 1 B ASP 117 B ASP 112 1 Y 1 B SER 118 B SER 113 1 Y 1 B GLY 119 B GLY 114 1 Y 1 B THR 120 B THR 115 1 Y 1 B SER 121 B SER 116 1 Y 1 B VAL 122 B VAL 117 1 Y 1 B SER 123 B SER 118 1 Y 1 B GLU 124 B GLU 119 1 Y 1 B ASN 125 B ASN 120 1 Y 1 -9.87 1.60 122.70 112.83 C C C O C N LEU LEU MK8 26 26 27 Y 1 -10.74 1.60 122.70 111.96 D D D O C N LEU LEU MK8 26 26 27 Y 1 A CYS 77 -148.58 15.95 34.247 -1.27 0.00 0.00 0.91 0.00 0.36 0.954 0.926 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES WITH TLS ADDED 0.23683 0.20049 0.20230 1.99 105.68 1011 18187 5.3 99.17 8.541 0.118 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.169 0.153 0.80 0.80 1.20 PDB ENTRY 2AXI MAXIMUM LIKELIHOOD MASK 1.99 105.68 85 1842 0 0 1757 0.005 0.020 1806 0.001 0.020 1802 1.260 2.020 2428 1.087 3.000 4136 5.398 5.000 200 39.762 23.506 77 12.648 15.000 324 13.024 15.000 9 0.053 0.200 273 0.004 0.021 1910 0.001 0.020 413 0.351 1.668 838 0.352 1.669 832 0.604 2.507 1023 0.353 1.708 968 0.279 0.249 2.042 69 1240 20 92.05 1.97 30.00 4UMN 19576 2.0 0.05 1 34.74 6.4 99.3 0.34 1.97 2.02 4.87 1 5.8 95.3 refinement REFMAC 5.8.0069 data reduction HKL-2000 data scaling HKL-2000 phasing PHASER Structure of a stapled peptide antagonist bound to Nutlin-resistant Mdm2. 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N 3 N N 3 N N A PRO 20 A PRO 15 HELX_P A GLU 25 A GLU 20 1 1 6 A LYS 31 A LYS 26 HELX_P A SER 40 A SER 35 1 2 10 A MET 50 A MET 45 HELX_P A LYS 64 A LYS 59 1 3 15 A ASP 80 A ASP 75 HELX_P A GLY 87 A GLY 82 1 4 8 A GLU 95 A GLU 90 HELX_P A ASN 106 A ASN 101 1 5 12 B PRO 20 B PRO 15 HELX_P B GLU 25 B GLU 20 1 6 6 B LYS 31 B LYS 26 HELX_P B VAL 41 B VAL 36 1 7 11 B MET 50 B MET 45 HELX_P B LYS 64 B LYS 59 1 8 15 B ASP 80 B ASP 75 HELX_P B GLY 87 B GLY 82 1 9 8 B GLU 95 B GLU 90 HELX_P B ARG 105 B ARG 100 1 10 11 C GLU 21 C GLU 6 HELX_P C MK8 27 C MK8 12 1 11 7 D GLU 21 D GLU 6 HELX_P D MK8 27 D MK8 12 1 12 7 covale 1.333 both C ACE 16 C C ACE 1 1_555 C THR 17 C N THR 2 1_555 covale 1.354 both C PHE 19 C C PHE 4 1_555 C 0EH 20 C N 0EH 5 1_555 covale 1.350 both C 0EH 20 C C 0EH 5 1_555 C GLU 21 C N GLU 6 1_555 covale 1.337 none C 0EH 20 C CAT 0EH 5 1_555 C MK8 27 C CE MK8 12 1_555 covale 1.287 both C LEU 26 C C LEU 11 1_555 C MK8 27 C N MK8 12 1_555 covale 1.421 both C MK8 27 C C MK8 12 1_555 C NH2 28 C N NH2 13 1_555 covale 1.334 both D ACE 16 D C ACE 1 1_555 D THR 17 D N THR 2 1_555 covale 1.351 both D PHE 19 D C PHE 4 1_555 D 0EH 20 D N 0EH 5 1_555 covale 1.347 both D 0EH 20 D C 0EH 5 1_555 D GLU 21 D N GLU 6 1_555 covale 1.343 none D 0EH 20 D CAT 0EH 5 1_555 D MK8 27 D CE MK8 12 1_555 covale 1.288 both D LEU 26 D C LEU 11 1_555 D MK8 27 D N MK8 12 1_555 covale 1.419 both D MK8 27 D C MK8 12 1_555 D NH2 28 D N NH2 13 1_555 CELL CYCLE CELL CYCLE MDM2_HUMAN UNP 1 6 Q00987 MSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDL FGVPSFSVKEHRKIYTMIYRNLVVVNQQESSDSGTSVSEN 4UMN PDB 2 1 4UMN 6 125 4UMN 6 125 Q00987 A 1 1 120 6 125 4UMN 6 125 Q00987 B 1 1 120 16 28 4UMN 16 28 4UMN C 2 1 13 16 28 4UMN 16 28 4UMN D 2 1 13 1 MET conflict ALA 62 4UMN A Q00987 UNP 62 57 2 MET conflict ALA 62 4UMN B Q00987 UNP 62 57 3 2 3 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A TYR 48 A TYR 43 A THR 49 A THR 44 A LEU 27 A LEU 22 A PRO 30 A PRO 25 A LEU 107 A LEU 102 A VAL 109 A VAL 104 A ILE 74 A ILE 69 A TYR 76 A TYR 71 A SER 90 A SER 85 A SER 92 A SER 87 B TYR 48 B TYR 43 B THR 49 B THR 44 B LEU 27 B LEU 22 B PRO 30 B PRO 25 B LEU 107 B LEU 102 B VAL 109 B VAL 104 B ILE 74 B ILE 69 B TYR 76 B TYR 71 B SER 90 B SER 85 B SER 92 B SER 87 18 P 2 21 21