0.017313 0.000000 0.000000 0.000000 0.017313 0.000000 0.000000 0.000000 0.007269 0.000000 0.000000 0.000000 Bang, J.K. Han, Y.H. Ahn, M.J. Lee, K.S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 57.760 57.760 137.568 C20 H29 N3 O2 343.463 n 3-(8-phenyloctyl)-L-histidine L-peptide linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C11 H13 N O3 207.226 4-(benzoylamino)butanoic acid peptide-like C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking H2 N 16.023 AMINO GROUP non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C4 H10 N O6 P 199.099 n PHOSPHOTHREONINE PHOSPHONOTHREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N N N 3 N O N 4 S C N 5 N C Y 6 N C N 7 N C N 8 N C N 9 N C N 10 N C N 11 N C N 12 N C N 13 N C N 14 N C Y 15 N C Y 16 N C Y 17 N C Y 18 N C Y 19 N C Y 20 N C Y 21 N N Y 22 N C Y 23 N C Y 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N N N 56 S C N 57 N C N 58 N O N 59 N C N 60 N O N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N N N 69 S C N 70 N C N 71 N O N 72 N C N 73 N C N 74 N C N 75 N N N 76 N C N 77 N N N 78 N N N 79 N O N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N O N 102 N N N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N N N 113 S C N 114 N C N 115 N O N 116 N C N 117 N C N 118 N O N 119 N O N 120 N O N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N N N 129 R C N 130 N C N 131 N O N 132 N C N 133 N S N 134 N O N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N N N 143 S C N 144 N C N 145 N O N 146 N C N 147 N C N 148 N C N 149 N O N 150 N N N 151 N O N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N N N 163 S C N 164 N C N 165 N O N 166 N C N 167 N C N 168 N C N 169 N O N 170 N O N 171 N O N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N N N 182 N C N 183 N C N 184 N O N 185 N O N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C Y 196 N C Y 197 N N Y 198 N C Y 199 N C Y 200 N N N 201 N O N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N O N 213 N H N 214 N H N 215 N N N 216 S C N 217 N C N 218 N O N 219 S C N 220 N C N 221 N C N 222 N C N 223 N O N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N C N 238 N O N 239 N C N 240 N C N 241 N C N 242 N N N 243 N C N 244 N O Y 245 N C Y 246 N C Y 247 N C Y 248 N C Y 249 N C Y 250 N C N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N O N 264 N H N 265 N N N 266 S C N 267 N C N 268 N O N 269 N C N 270 N C N 271 N C N 272 N C N 273 N O N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 N C N 292 N C N 293 N C N 294 N C N 295 N N N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 N C N 317 N C N 318 N S N 319 N C N 320 N O N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N N N 333 N H N 334 N H N 335 N N N 336 S C N 337 N C N 338 N O N 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C Y 345 N C N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C N 363 N C N 364 N C N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 N C N 380 N O N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N N N 390 S C N 391 N C N 392 N O N 393 R C N 394 N O N 395 N C N 396 N O N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N N N 407 S C N 408 R C N 409 N C N 410 N O N 411 N P N 412 N O N 413 N O N 414 N O N 415 N C N 416 N O N 417 N O N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N N N 429 S C N 430 N C N 431 N O N 432 N C Y 433 N C Y 434 N C Y 435 N C Y 436 N N Y 437 N C Y 438 N C Y 439 N C Y 440 N C Y 441 N C N 442 N O N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N N N 456 S C N 457 N C N 458 N O N 459 N C Y 460 N C Y 461 N C Y 462 N C Y 463 N C Y 464 N C Y 465 N C N 466 N O N 467 N O N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N N N 480 S C N 481 N C N 482 N O N 483 N C N 484 N C N 485 N C N 486 N O N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing Y 12 N doub Y 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing Y 39 N doub Y 40 N sing Y 41 N doub N 42 N sing Y 43 N sing N 44 N sing Y 45 N doub N 46 N sing Y 47 N sing N 48 N sing N 49 N sing Y 50 N sing Y 51 N sing N 52 N sing Y 53 N doub N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N doub N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N doub N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N doub N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N doub N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N doub N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N doub N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N doub N 191 N sing N 192 N sing N 193 N sing N 194 N sing Y 195 N sing Y 196 N doub Y 197 N doub N 198 N sing Y 199 N sing N 200 N sing Y 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N doub N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N doub N 235 N sing Y 236 N doub Y 237 N sing Y 238 N doub Y 239 N sing Y 240 N doub Y 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing Y 333 N doub Y 334 N sing Y 335 N sing N 336 N sing Y 337 N doub N 338 N sing Y 339 N doub N 340 N sing Y 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N doub N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N doub N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N doub N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N doub N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N doub N 419 N sing N 420 N sing N 421 N sing N 422 N sing Y 423 N doub Y 424 N sing Y 425 N sing N 426 N sing Y 427 N doub Y 428 N sing Y 429 N sing N 430 N sing Y 431 N sing Y 432 N doub N 433 N sing Y 434 N doub N 435 N sing Y 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N doub N 447 N sing N 448 N sing N 449 N sing N 450 N sing Y 451 N doub Y 452 N sing Y 453 N sing N 454 N sing Y 455 N doub N 456 N sing Y 457 N doub N 458 N sing Y 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N doub N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing US J.Med.Chem. JMCMAR 0151 0022-2623 58 294 304 10.1021/jm501147g 25347203 A new class of peptidomimetics targeting the polo-box domain of polo-like kinase 1. 2015 10.2210/pdb4whl/pdb pdb_00004whl TPO B 4 HAS WRONG CHIRALITY AT ATOM CB 93 1 CCD 2013-05-09 ADSC QUANTUM 270 SINGLE WAVELENGTH M x-ray 1 1.0000 1.0 7A (6B, 6C1) PAL/PLS 1.0000 SYNCHROTRON PAL/PLS BEAMLINE 7A (6B, 6C1) 27285.158 Serine/threonine-protein kinase PLK1 2.7.11.21 UNP RESIDUES 371-603 1 man polymer 798.843 C6H5(CH2)8-DERIVATIZED PEPTIDE INHIBITOR 1 syn polymer 18.015 water 1 nat water Polo-like kinase 1,PLK-1,Serine/threonine-protein kinase 13,STPK13 no no GAHMDCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYN DGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLS NGSVQINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS GAHMDCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYN DGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLS NGSVQINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS A polypeptide(L) no yes (KAC)(56A)S(TPO)(NH2) XHSTX B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 237 PLK1, PLK 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21(DE3) plasmid Biological sequence pET28 1 2.10 41.50 VAPOR DIFFUSION, SITTING DROP 3.5 0.1M Citric acid, 28% PEG8000 293 atom_site chem_comp_atom chem_comp_bond database_2 entity_src_gen pdbx_entity_src_syn pdbx_struct_oper_list struct_conn repository Initial release Database references Structure summary Atomic model Data collection Database references Derived calculations Source and taxonomy 1 0 2014-12-03 1 1 2015-01-21 1 2 2015-02-11 2 0 2023-11-15 _atom_site.auth_atom_id _atom_site.label_atom_id _database_2.pdbx_DOI _database_2.pdbx_database_accession _entity_src_gen.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_struct_oper_list.symmetry_operation _struct_conn.ptnr1_label_atom_id Korea, Republic Of Korea Basic Science Institute T34418 Korea, Republic Of Rural Development Administration PJ009594 N RCSB Y PDBJ 2014-09-23 REL REL HOH water 32630 synthetic construct sample 1 5 Enzyme inhibitor C6H5(CH2)8-derivatized peptide inhibitor Polypeptide HOH 2 3 HOH HOH 701 A n 1 367 A n 2 368 A n 3 369 A n 4 370 A ASP 371 n 5 ASP 371 A CYS 372 n 6 CYS 372 A HIS 373 n 7 HIS 373 A LEU 374 n 8 LEU 374 A SER 375 n 9 SER 375 A ASP 376 n 10 ASP 376 A MET 377 n 11 MET 377 A LEU 378 n 12 LEU 378 A GLN 379 n 13 GLN 379 A GLN 380 n 14 GLN 380 A LEU 381 n 15 LEU 381 A HIS 382 n 16 HIS 382 A SER 383 n 17 SER 383 A VAL 384 n 18 VAL 384 A ASN 385 n 19 ASN 385 A ALA 386 n 20 ALA 386 A SER 387 n 21 SER 387 A LYS 388 n 22 LYS 388 A PRO 389 n 23 PRO 389 A SER 390 n 24 SER 390 A GLU 391 n 25 GLU 391 A ARG 392 n 26 ARG 392 A GLY 393 n 27 GLY 393 A LEU 394 n 28 LEU 394 A VAL 395 n 29 VAL 395 A ARG 396 n 30 ARG 396 A GLN 397 n 31 GLN 397 A GLU 398 n 32 GLU 398 A GLU 399 n 33 GLU 399 A ALA 400 n 34 ALA 400 A GLU 401 n 35 GLU 401 A ASP 402 n 36 ASP 402 A PRO 403 n 37 PRO 403 A ALA 404 n 38 ALA 404 A CYS 405 n 39 CYS 405 A ILE 406 n 40 ILE 406 A PRO 407 n 41 PRO 407 A ILE 408 n 42 ILE 408 A PHE 409 n 43 PHE 409 A TRP 410 n 44 TRP 410 A VAL 411 n 45 VAL 411 A SER 412 n 46 SER 412 A LYS 413 n 47 LYS 413 A TRP 414 n 48 TRP 414 A VAL 415 n 49 VAL 415 A ASP 416 n 50 ASP 416 A TYR 417 n 51 TYR 417 A SER 418 n 52 SER 418 A ASP 419 n 53 ASP 419 A LYS 420 n 54 LYS 420 A TYR 421 n 55 TYR 421 A GLY 422 n 56 GLY 422 A LEU 423 n 57 LEU 423 A GLY 424 n 58 GLY 424 A TYR 425 n 59 TYR 425 A GLN 426 n 60 GLN 426 A LEU 427 n 61 LEU 427 A CYS 428 n 62 CYS 428 A ASP 429 n 63 ASP 429 A ASN 430 n 64 ASN 430 A SER 431 n 65 SER 431 A VAL 432 n 66 VAL 432 A GLY 433 n 67 GLY 433 A VAL 434 n 68 VAL 434 A LEU 435 n 69 LEU 435 A PHE 436 n 70 PHE 436 A ASN 437 n 71 ASN 437 A ASP 438 n 72 ASP 438 A SER 439 n 73 SER 439 A THR 440 n 74 THR 440 A ARG 441 n 75 ARG 441 A LEU 442 n 76 LEU 442 A ILE 443 n 77 ILE 443 A LEU 444 n 78 LEU 444 A TYR 445 n 79 TYR 445 A ASN 446 n 80 ASN 446 A ASP 447 n 81 ASP 447 A GLY 448 n 82 GLY 448 A ASP 449 n 83 ASP 449 A SER 450 n 84 SER 450 A LEU 451 n 85 LEU 451 A GLN 452 n 86 GLN 452 A TYR 453 n 87 TYR 453 A ILE 454 n 88 ILE 454 A GLU 455 n 89 GLU 455 A ARG 456 n 90 ARG 456 A ASP 457 n 91 ASP 457 A GLY 458 n 92 GLY 458 A THR 459 n 93 THR 459 A GLU 460 n 94 GLU 460 A SER 461 n 95 SER 461 A TYR 462 n 96 TYR 462 A LEU 463 n 97 LEU 463 A THR 464 n 98 THR 464 A VAL 465 n 99 VAL 465 A SER 466 n 100 SER 466 A SER 467 n 101 SER 467 A HIS 468 n 102 HIS 468 A PRO 469 n 103 PRO 469 A ASN 470 n 104 ASN 470 A SER 471 n 105 SER 471 A LEU 472 n 106 LEU 472 A MET 473 n 107 MET 473 A LYS 474 n 108 LYS 474 A LYS 475 n 109 LYS 475 A ILE 476 n 110 ILE 476 A THR 477 n 111 THR 477 A LEU 478 n 112 LEU 478 A LEU 479 n 113 LEU 479 A LYS 480 n 114 LYS 480 A TYR 481 n 115 TYR 481 A PHE 482 n 116 PHE 482 A ARG 483 n 117 ARG 483 A ASN 484 n 118 ASN 484 A TYR 485 n 119 TYR 485 A MET 486 n 120 MET 486 A SER 487 n 121 SER 487 A GLU 488 n 122 GLU 488 A HIS 489 n 123 HIS 489 A LEU 490 n 124 LEU 490 A LEU 491 n 125 LEU 491 A LYS 492 n 126 LYS 492 A ALA 493 n 127 ALA 493 A GLY 494 n 128 GLY 494 A ALA 495 n 129 ALA 495 A ASN 496 n 130 ASN 496 A ILE 497 n 131 ILE 497 A THR 498 n 132 THR 498 A n 133 499 A n 134 500 A n 135 501 A n 136 502 A n 137 503 A n 138 504 A LEU 505 n 139 LEU 505 A ALA 506 n 140 ALA 506 A ARG 507 n 141 ARG 507 A LEU 508 n 142 LEU 508 A PRO 509 n 143 PRO 509 A TYR 510 n 144 TYR 510 A LEU 511 n 145 LEU 511 A ARG 512 n 146 ARG 512 A THR 513 n 147 THR 513 A TRP 514 n 148 TRP 514 A PHE 515 n 149 PHE 515 A ARG 516 n 150 ARG 516 A THR 517 n 151 THR 517 A ARG 518 n 152 ARG 518 A SER 519 n 153 SER 519 A ALA 520 n 154 ALA 520 A ILE 521 n 155 ILE 521 A ILE 522 n 156 ILE 522 A LEU 523 n 157 LEU 523 A HIS 524 n 158 HIS 524 A LEU 525 n 159 LEU 525 A SER 526 n 160 SER 526 A ASN 527 n 161 ASN 527 A GLY 528 n 162 GLY 528 A SER 529 n 163 SER 529 A VAL 530 n 164 VAL 530 A GLN 531 n 165 GLN 531 A ILE 532 n 166 ILE 532 A ASN 533 n 167 ASN 533 A PHE 534 n 168 PHE 534 A PHE 535 n 169 PHE 535 A GLN 536 n 170 GLN 536 A ASP 537 n 171 ASP 537 A HIS 538 n 172 HIS 538 A THR 539 n 173 THR 539 A LYS 540 n 174 LYS 540 A LEU 541 n 175 LEU 541 A ILE 542 n 176 ILE 542 A LEU 543 n 177 LEU 543 A CYS 544 n 178 CYS 544 A PRO 545 n 179 PRO 545 A LEU 546 n 180 LEU 546 A MET 547 n 181 MET 547 A ALA 548 n 182 ALA 548 A ALA 549 n 183 ALA 549 A VAL 550 n 184 VAL 550 A THR 551 n 185 THR 551 A TYR 552 n 186 TYR 552 A ILE 553 n 187 ILE 553 A ASP 554 n 188 ASP 554 A GLU 555 n 189 GLU 555 A LYS 556 n 190 LYS 556 A ARG 557 n 191 ARG 557 A ASP 558 n 192 ASP 558 A PHE 559 n 193 PHE 559 A ARG 560 n 194 ARG 560 A THR 561 n 195 THR 561 A TYR 562 n 196 TYR 562 A ARG 563 n 197 ARG 563 A LEU 564 n 198 LEU 564 A SER 565 n 199 SER 565 A LEU 566 n 200 LEU 566 A LEU 567 n 201 LEU 567 A GLU 568 n 202 GLU 568 A GLU 569 n 203 GLU 569 A TYR 570 n 204 TYR 570 A GLY 571 n 205 GLY 571 A CYS 572 n 206 CYS 572 A CYS 573 n 207 CYS 573 A LYS 574 n 208 LYS 574 A GLU 575 n 209 GLU 575 A LEU 576 n 210 LEU 576 A ALA 577 n 211 ALA 577 A SER 578 n 212 SER 578 A ARG 579 n 213 ARG 579 A LEU 580 n 214 LEU 580 A ARG 581 n 215 ARG 581 A TYR 582 n 216 TYR 582 A ALA 583 n 217 ALA 583 A ARG 584 n 218 ARG 584 A THR 585 n 219 THR 585 A MET 586 n 220 MET 586 A VAL 587 n 221 VAL 587 A ASP 588 n 222 ASP 588 A LYS 589 n 223 LYS 589 A LEU 590 n 224 LEU 590 A LEU 591 n 225 LEU 591 A SER 592 n 226 SER 592 A n 227 593 A n 228 594 A n 229 595 A n 230 596 A n 231 597 A n 232 598 A n 233 599 A n 234 600 A n 235 601 A n 236 602 A n 237 603 A ABA 1 n 1 KAC 1 B ABA 1 n 2 56A 2 B ABA 1 n 3 SER 3 B ABA 1 n 4 TPO 4 B ABA 1 n 5 NH2 5 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 415 A N VAL 49 A O GLY 424 A O GLY 58 A N TYR 425 A N TYR 59 A O GLY 433 A O GLY 67 A N VAL 432 A N VAL 66 A O LEU 444 A O LEU 78 A N ARG 441 A N ARG 75 A O ILE 454 A O ILE 88 A N LEU 451 A N LEU 85 A O LEU 463 A O LEU 97 A N THR 513 A N THR 147 A O HIS 524 A O HIS 158 A N LEU 525 A N LEU 159 A O SER 529 A O SER 163 A N VAL 530 A N VAL 164 A O LEU 543 A O LEU 177 A N LYS 540 A N LYS 174 A O ILE 553 A O ILE 187 A N TYR 552 A N TYR 186 A O ARG 560 A O ARG 194 1 A CD GLN 379 A CD GLN 13 1 Y 1 A OE1 GLN 379 A OE1 GLN 13 1 Y 1 A NE2 GLN 379 A NE2 GLN 13 1 Y 1 A NE ARG 456 A NE ARG 90 1 Y 1 A CZ ARG 456 A CZ ARG 90 1 Y 1 A NH1 ARG 456 A NH1 ARG 90 1 Y 1 A NH2 ARG 456 A NH2 ARG 90 1 Y 1 A CD LYS 474 A CD LYS 108 1 Y 1 A CE LYS 474 A CE LYS 108 1 Y 1 A NZ LYS 474 A NZ LYS 108 1 Y 1 A CD LYS 480 A CD LYS 114 1 Y 1 A CE LYS 480 A CE LYS 114 1 Y 1 A NZ LYS 480 A NZ LYS 114 1 Y 1 A CD GLU 488 A CD GLU 122 1 Y 1 A OE1 GLU 488 A OE1 GLU 122 1 Y 1 A OE2 GLU 488 A OE2 GLU 122 1 Y 1 A CG GLN 536 A CG GLN 170 1 Y 1 A CD GLN 536 A CD GLN 170 1 Y 1 A OE1 GLN 536 A OE1 GLN 170 1 Y 1 A NE2 GLN 536 A NE2 GLN 170 1 Y 1 A CG LYS 556 A CG LYS 190 1 Y 1 A CD LYS 556 A CD LYS 190 1 Y 1 A CE LYS 556 A CE LYS 190 1 Y 1 A NZ LYS 556 A NZ LYS 190 1 Y 1 A NE ARG 557 A NE ARG 191 1 Y 1 A CZ ARG 557 A CZ ARG 191 1 Y 1 A NH1 ARG 557 A NH1 ARG 191 1 Y 1 A NH2 ARG 557 A NH2 ARG 191 1 Y 1 A NH1 ARG 560 A NH1 ARG 194 1 Y 1 A NH2 ARG 560 A NH2 ARG 194 1 Y 1 A CZ ARG 563 A CZ ARG 197 1 Y 1 A NH1 ARG 563 A NH1 ARG 197 1 Y 1 A NH2 ARG 563 A NH2 ARG 197 1 Y 1 A CD LYS 574 A CD LYS 208 1 Y 1 A CE LYS 574 A CE LYS 208 1 Y 1 A NZ LYS 574 A NZ LYS 208 1 Y 1 A CE LYS 589 A CE LYS 223 1 Y 1 A NZ LYS 589 A NZ LYS 223 1 Y 1 A GLY 367 A GLY 1 1 Y 1 A ALA 368 A ALA 2 1 Y 1 A HIS 369 A HIS 3 1 Y 1 A MET 370 A MET 4 1 Y 1 A PRO 499 A PRO 133 1 Y 1 A ARG 500 A ARG 134 1 Y 1 A GLU 501 A GLU 135 1 Y 1 A GLY 502 A GLY 136 1 Y 1 A ASP 503 A ASP 137 1 Y 1 A GLU 504 A GLU 138 1 Y 1 A SER 593 A SER 227 1 Y 1 A ARG 594 A ARG 228 1 Y 1 A SER 595 A SER 229 1 Y 1 A ALA 596 A ALA 230 1 Y 1 A SER 597 A SER 231 1 Y 1 A ASN 598 A ASN 232 1 Y 1 A ARG 599 A ARG 233 1 Y 1 A LEU 600 A LEU 234 1 Y 1 A LYS 601 A LYS 235 1 Y 1 A ALA 602 A ALA 236 1 Y 1 A SER 603 A SER 237 1 Y 1 B CB TPO 4 WRONG HAND 1 A GLN 379 -62.72 -72.25 1 A GLN 380 -25.61 -57.72 1 A LYS 388 42.23 71.81 1 A LEU 394 -151.48 86.27 1 A ASP 402 -166.62 79.17 1 A ALA 404 -67.52 17.33 1 A LYS 420 -138.43 -45.27 1 A ASN 430 73.40 -2.42 1 A ASP 438 -68.03 4.64 1 A ASP 449 -135.11 -45.81 1 A PRO 469 -49.23 155.24 1 A HIS 489 -107.21 -80.89 1 A GLU 575 -50.52 -77.10 1 B SER 3 -58.47 175.02 109.130 47.3450 26.130 -1.6900 0.0000 0.0000 -1.6900 0.0000 3.3900 0.9510 0.9180 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY 0.2454 0.1822 0.1854 2.7100 50 340 6519 6519 5.0000 99.9100 0.2308 0.1639 0.8266 11.7970 0.2460 0.3533 RANDOM 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT 0.3530 0.8000 0.8000 1.2000 MAXIMUM LIKELIHOOD MASK 2.7100 50 1 1832 40.80 34.79 56 0 1775 216 0.013 0.020 1819 0.004 0.020 1696 1.627 1.992 2463 1.075 3.011 3897 7.917 5.000 214 36.625 23.462 78 20.923 15.000 305 18.809 15.000 12 0.087 0.200 278 0.007 0.020 2003 0.001 0.020 427 3.453 4.682 865 3.455 4.684 863 5.456 7.006 1076 0.2830 0.2210 2.7760 34 464 498 20 100.0000 2.7 50 4WHL 6904 1 8.8 16.4 99.9 data reduction HKL-2000 data collection ADSC refinement REFMAC 5.8.0073 data extraction PDB_EXTRACT 3.15 data scaling HKL-2000 phasing PHASER A New Class of Peptidomimetics Targeting the Polo-box Domain of Polo-like kinase 1 1 N N 2 N N 3 N N A ASP 371 A ASP 5 HELX_P A SER 387 A SER 21 1 AA1 17 A ARG 396 A ARG 30 HELX_P A GLU 401 A GLU 35 5 AA2 6 A ASP 402 A ASP 36 HELX_P A ILE 406 A ILE 40 5 AA3 5 A PRO 469 A PRO 103 HELX_P A SER 471 A SER 105 5 AA4 3 A LEU 472 A LEU 106 HELX_P A SER 487 A SER 121 1 AA5 16 A LEU 564 A LEU 198 HELX_P A GLY 571 A GLY 205 1 AA6 8 A CYS 573 A CYS 207 HELX_P A SER 592 A SER 226 1 AA7 20 covale 1.340 both B KAC 1 B C KAC 1 1_555 B 56A 2 B N 56A 2 1_555 covale 1.365 both B 56A 2 B C 56A 2 1_555 B SER 3 B N SER 3 1_555 covale 1.317 both B SER 3 B C SER 3 1_555 B TPO 4 B N TPO 4 1_555 covale 1.339 both B TPO 4 B C TPO 4 1_555 B NH2 5 B N NH2 5 1_555 TRANSFERASE/TRANSFERASE INHIBITOR Polo-like kinase, Polo-box domain, Inhibitor, peptide derivative, TRANSFERASE-TRANSFERASE INHIBITOR complex PLK1_HUMAN UNP 1 371 P53350 DCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDS LQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLSNGSV QINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS 4WHL PDB 2 1 4WHL 371 603 4WHL 371 603 P53350 A 1 5 237 1 5 4WHL 1 5 4WHL B 2 1 5 1 expression tag GLY 367 4WHL A P53350 UNP 1 1 expression tag ALA 368 4WHL A P53350 UNP 2 1 expression tag HIS 369 4WHL A P53350 UNP 3 1 expression tag MET 370 4WHL A P53350 UNP 4 6 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 411 A VAL 45 A ASP 416 A ASP 50 A GLY 422 A GLY 56 A LEU 427 A LEU 61 A VAL 432 A VAL 66 A PHE 436 A PHE 70 A ARG 441 A ARG 75 A LEU 444 A LEU 78 A SER 450 A SER 84 A ILE 454 A ILE 88 A GLU 460 A GLU 94 A THR 464 A THR 98 A LEU 511 A LEU 145 A ARG 516 A ARG 150 A ALA 520 A ALA 154 A LEU 525 A LEU 159 A SER 529 A SER 163 A PHE 534 A PHE 168 A LYS 540 A LYS 174 A CYS 544 A CYS 178 A ALA 549 A ALA 183 A ILE 553 A ILE 187 A PHE 559 A PHE 193 A ARG 563 A ARG 197 BINDING SITE FOR CHAIN B OF C6H5(CH2)8-DERIVATIZED PEPTIDE INHIBITOR Software 17 A LYS 413 A LYS 47 17 1_555 A TRP 414 A TRP 48 17 1_555 A VAL 415 A VAL 49 17 1_555 A ASP 416 A ASP 50 17 1_555 A TYR 421 A TYR 55 17 1_555 A SER 450 A SER 84 17 6_477 A LEU 451 A LEU 85 17 6_477 A TYR 462 A TYR 96 17 6_477 A LEU 463 A LEU 97 17 6_477 A THR 464 A THR 98 17 6_477 A TYR 481 A TYR 115 17 1_555 A TYR 485 A TYR 119 17 1_555 A LEU 490 A LEU 124 17 1_555 A LEU 491 A LEU 125 17 1_555 A ARG 516 A ARG 150 17 1_555 A HIS 538 A HIS 172 17 1_555 A LYS 540 A LYS 174 17 1_555 96 P 43 21 2