0.019996
0.000000
0.000000
0.000000
0.008527
0.000000
0.000000
0.000000
0.016393
0.00000
0.00000
0.00000
Quay, D.H.X.
Cole, A.R.
Cryar, A.
Thalassinos, K.
Williams, M.A.
Bhakta, S.
Keep, N.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
50.010
117.270
61.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
C
N
75
N
O
N
76
N
C
N
77
N
O
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
N
N
85
S
C
N
86
N
C
N
87
N
O
N
88
N
C
N
89
N
C
N
90
N
C
N
91
N
O
N
92
N
N
N
93
N
O
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
N
N
105
S
C
N
106
N
C
N
107
N
O
N
108
N
C
N
109
N
C
N
110
N
C
N
111
N
O
N
112
N
O
N
113
N
O
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
N
C
N
125
N
C
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
N
N
137
S
C
N
138
N
C
N
139
N
O
N
140
S
C
N
141
N
C
N
142
N
C
N
143
N
C
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
N
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
N
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
Y
210
N
C
Y
211
N
C
Y
212
N
C
Y
213
N
C
Y
214
N
C
Y
215
N
C
N
216
N
O
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
N
N
229
S
C
N
230
N
C
N
231
N
O
N
232
N
C
N
233
N
C
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
N
N
246
S
C
N
247
N
C
N
248
N
O
N
249
N
C
N
250
N
O
N
251
N
O
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
R
C
N
264
N
O
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
Y
281
N
C
Y
282
N
C
Y
283
N
C
Y
284
N
N
Y
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
N
N
304
S
C
N
305
N
C
N
306
N
O
N
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
N
314
N
O
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
N
332
N
C
N
333
N
C
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
doub
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
doub
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
Y
204
N
doub
Y
205
N
sing
Y
206
N
sing
N
207
N
sing
Y
208
N
doub
N
209
N
sing
Y
210
N
doub
N
211
N
sing
Y
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
doub
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
Y
273
N
doub
Y
274
N
sing
Y
275
N
sing
N
276
N
sing
Y
277
N
doub
Y
278
N
sing
Y
279
N
sing
N
280
N
sing
Y
281
N
sing
Y
282
N
doub
N
283
N
sing
Y
284
N
doub
N
285
N
sing
Y
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
Y
301
N
doub
Y
302
N
sing
Y
303
N
sing
N
304
N
sing
Y
305
N
doub
N
306
N
sing
Y
307
N
doub
N
308
N
sing
Y
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
UK
Bmc Struct.Biol.
1472-6807
15
12
12
10.1186/s12900-015-0039-z
26163297
Structure of the stationary phase survival protein YuiC from B.subtilis.
2015
10.2210/pdb4wli/pdb
pdb_00004wli
100
1
PIXEL
2013-06-30
PSI PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.92000
1.0
I04-1
Diamond
0.92000
SYNCHROTRON
DIAMOND BEAMLINE I04-1
16245.218
YuiC
1
man
polymer
62.068
1,2-ETHANEDIOL
4
syn
non-polymer
18.015
water
128
nat
water
no
no
PLEEAFDWDEYPVQRVTATGYTAGAESTGKNPGDPLYGLTYSGVKVKRDLYSTVAADPSVFPIGTILFIPNYGLGVVADT
GSAIKGNRLDLYFETVKDVYNEWGKKTLDVYVIKKGTGKITEDELEKLNETKSLQVFRNQYKTVKE
PLEEAFDWDEYPVQRVTATGYTAGAESTGKNPGDPLYGLTYSGVKVKRDLYSTVAADPSVFPIGTILFIPNYGLGVVADT
GSAIKGNRLDLYFETVKDVYNEWGKKTLDVYVIKKGTGKITEDELEKLNETKSLQVFRNQYKTVKE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
168
sample
1
146
yuiC, BSU32070
224308
Bacillus subtilis
469008
Escherichia coli BL21(DE3)
Rosetta-2
plasmid
Biological sequence
pNic28-Bsa4
2.75
55.32
VAPOR DIFFUSION, SITTING DROP
7.5
0.2M ammonium chloride, 25 (v/v) glycerol ethoxylate, 0.1M HEPES pH7.5
289
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Database references
Data collection
Database references
Refinement description
1
0
2015-07-08
1
1
2016-09-21
1
2
2024-01-10
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
4wjt has same protein with NAG bound in the active site
N
RCSB
Y
PDBE
2014-10-07
REL
REL
EDO
1,2-ETHANEDIOL
HOH
water
4WJT
PDB
experimental model
EDO
1
2
EDO
EDO
301
A
EDO
2
2
EDO
EDO
302
A
EDO
3
2
EDO
EDO
303
A
EDO
5
2
EDO
EDO
304
A
HOH
95
3
HOH
HOH
401
A
HOH
141
3
HOH
HOH
402
A
HOH
46
3
HOH
HOH
403
A
HOH
156
3
HOH
HOH
404
A
HOH
107
3
HOH
HOH
405
A
HOH
33
3
HOH
HOH
406
A
HOH
140
3
HOH
HOH
407
A
HOH
59
3
HOH
HOH
408
A
HOH
28
3
HOH
HOH
409
A
HOH
131
3
HOH
HOH
410
A
HOH
23
3
HOH
HOH
411
A
HOH
121
3
HOH
HOH
412
A
HOH
94
3
HOH
HOH
413
A
HOH
45
3
HOH
HOH
414
A
HOH
48
3
HOH
HOH
415
A
HOH
99
3
HOH
HOH
416
A
HOH
112
3
HOH
HOH
417
A
HOH
37
3
HOH
HOH
418
A
HOH
14
3
HOH
HOH
419
A
HOH
10
3
HOH
HOH
420
A
HOH
125
3
HOH
HOH
421
A
HOH
19
3
HOH
HOH
422
A
HOH
8
3
HOH
HOH
423
A
HOH
17
3
HOH
HOH
424
A
HOH
54
3
HOH
HOH
425
A
HOH
9
3
HOH
HOH
426
A
HOH
22
3
HOH
HOH
427
A
HOH
139
3
HOH
HOH
428
A
HOH
35
3
HOH
HOH
429
A
HOH
105
3
HOH
HOH
430
A
HOH
31
3
HOH
HOH
431
A
HOH
13
3
HOH
HOH
432
A
HOH
143
3
HOH
HOH
433
A
HOH
5
3
HOH
HOH
434
A
HOH
36
3
HOH
HOH
435
A
HOH
55
3
HOH
HOH
436
A
HOH
100
3
HOH
HOH
437
A
HOH
154
3
HOH
HOH
438
A
HOH
16
3
HOH
HOH
439
A
HOH
25
3
HOH
HOH
440
A
HOH
11
3
HOH
HOH
441
A
HOH
69
3
HOH
HOH
442
A
HOH
52
3
HOH
HOH
443
A
HOH
47
3
HOH
HOH
444
A
HOH
53
3
HOH
HOH
445
A
HOH
101
3
HOH
HOH
446
A
HOH
3
3
HOH
HOH
447
A
HOH
30
3
HOH
HOH
448
A
HOH
26
3
HOH
HOH
449
A
HOH
117
3
HOH
HOH
450
A
HOH
12
3
HOH
HOH
451
A
HOH
29
3
HOH
HOH
452
A
HOH
108
3
HOH
HOH
453
A
HOH
145
3
HOH
HOH
454
A
HOH
114
3
HOH
HOH
455
A
HOH
150
3
HOH
HOH
456
A
HOH
7
3
HOH
HOH
457
A
HOH
70
3
HOH
HOH
458
A
HOH
60
3
HOH
HOH
459
A
HOH
138
3
HOH
HOH
460
A
HOH
151
3
HOH
HOH
461
A
HOH
153
3
HOH
HOH
462
A
HOH
116
3
HOH
HOH
463
A
HOH
119
3
HOH
HOH
464
A
HOH
110
3
HOH
HOH
465
A
HOH
102
3
HOH
HOH
466
A
HOH
152
3
HOH
HOH
467
A
HOH
118
3
HOH
HOH
468
A
HOH
106
3
HOH
HOH
469
A
HOH
40
3
HOH
HOH
470
A
HOH
62
3
HOH
HOH
471
A
HOH
43
3
HOH
HOH
472
A
HOH
157
3
HOH
HOH
473
A
HOH
155
3
HOH
HOH
474
A
HOH
57
3
HOH
HOH
475
A
HOH
146
3
HOH
HOH
476
A
HOH
111
3
HOH
HOH
477
A
HOH
86
3
HOH
HOH
478
A
HOH
1
3
HOH
HOH
479
A
HOH
2
3
HOH
HOH
480
A
HOH
4
3
HOH
HOH
481
A
HOH
6
3
HOH
HOH
482
A
HOH
15
3
HOH
HOH
483
A
HOH
18
3
HOH
HOH
484
A
HOH
20
3
HOH
HOH
485
A
HOH
21
3
HOH
HOH
486
A
HOH
24
3
HOH
HOH
487
A
HOH
27
3
HOH
HOH
488
A
HOH
32
3
HOH
HOH
489
A
HOH
34
3
HOH
HOH
490
A
HOH
41
3
HOH
HOH
491
A
HOH
42
3
HOH
HOH
492
A
HOH
49
3
HOH
HOH
493
A
HOH
50
3
HOH
HOH
494
A
HOH
56
3
HOH
HOH
495
A
HOH
61
3
HOH
HOH
496
A
HOH
63
3
HOH
HOH
497
A
HOH
64
3
HOH
HOH
498
A
HOH
65
3
HOH
HOH
499
A
HOH
66
3
HOH
HOH
500
A
HOH
67
3
HOH
HOH
501
A
HOH
68
3
HOH
HOH
502
A
HOH
71
3
HOH
HOH
503
A
HOH
72
3
HOH
HOH
504
A
HOH
74
3
HOH
HOH
505
A
HOH
75
3
HOH
HOH
506
A
HOH
81
3
HOH
HOH
507
A
HOH
83
3
HOH
HOH
508
A
HOH
85
3
HOH
HOH
509
A
HOH
96
3
HOH
HOH
510
A
HOH
103
3
HOH
HOH
511
A
HOH
113
3
HOH
HOH
512
A
HOH
115
3
HOH
HOH
513
A
HOH
120
3
HOH
HOH
514
A
HOH
122
3
HOH
HOH
515
A
HOH
123
3
HOH
HOH
516
A
HOH
124
3
HOH
HOH
517
A
HOH
126
3
HOH
HOH
518
A
HOH
127
3
HOH
HOH
519
A
HOH
128
3
HOH
HOH
520
A
HOH
130
3
HOH
HOH
521
A
HOH
132
3
HOH
HOH
522
A
HOH
136
3
HOH
HOH
523
A
HOH
137
3
HOH
HOH
524
A
HOH
142
3
HOH
HOH
525
A
HOH
144
3
HOH
HOH
526
A
HOH
148
3
HOH
HOH
527
A
HOH
149
3
HOH
HOH
528
A
PRO
73
n
1
PRO
73
A
LEU
74
n
2
LEU
74
A
GLU
75
n
3
GLU
75
A
GLU
76
n
4
GLU
76
A
ALA
77
n
5
ALA
77
A
PHE
78
n
6
PHE
78
A
ASP
79
n
7
ASP
79
A
TRP
80
n
8
TRP
80
A
ASP
81
n
9
ASP
81
A
GLU
82
n
10
GLU
82
A
TYR
83
n
11
TYR
83
A
PRO
84
n
12
PRO
84
A
VAL
85
n
13
VAL
85
A
GLN
86
n
14
GLN
86
A
ARG
87
n
15
ARG
87
A
VAL
88
n
16
VAL
88
A
THR
89
n
17
THR
89
A
ALA
90
n
18
ALA
90
A
THR
91
n
19
THR
91
A
GLY
92
n
20
GLY
92
A
TYR
93
n
21
TYR
93
A
THR
94
n
22
THR
94
A
ALA
95
n
23
ALA
95
A
GLY
96
n
24
GLY
96
A
n
25
97
A
n
26
98
A
n
27
99
A
n
28
100
A
GLY
101
n
29
GLY
101
A
LYS
102
n
30
LYS
102
A
ASN
103
n
31
ASN
103
A
PRO
104
n
32
PRO
104
A
GLY
105
n
33
GLY
105
A
ASP
106
n
34
ASP
106
A
PRO
107
n
35
PRO
107
A
LEU
108
n
36
LEU
108
A
TYR
109
n
37
TYR
109
A
GLY
110
n
38
GLY
110
A
LEU
111
n
39
LEU
111
A
THR
112
n
40
THR
112
A
TYR
113
n
41
TYR
113
A
SER
114
n
42
SER
114
A
GLY
115
n
43
GLY
115
A
VAL
116
n
44
VAL
116
A
LYS
117
n
45
LYS
117
A
VAL
118
n
46
VAL
118
A
LYS
119
n
47
LYS
119
A
ARG
120
n
48
ARG
120
A
ASP
121
n
49
ASP
121
A
LEU
122
n
50
LEU
122
A
TYR
123
n
51
TYR
123
A
SER
124
n
52
SER
124
A
THR
125
n
53
THR
125
A
VAL
126
n
54
VAL
126
A
ALA
127
n
55
ALA
127
A
ALA
128
n
56
ALA
128
A
ASP
129
n
57
ASP
129
A
PRO
130
n
58
PRO
130
A
SER
131
n
59
SER
131
A
VAL
132
n
60
VAL
132
A
PHE
133
n
61
PHE
133
A
PRO
134
n
62
PRO
134
A
ILE
135
n
63
ILE
135
A
GLY
136
n
64
GLY
136
A
THR
137
n
65
THR
137
A
ILE
138
n
66
ILE
138
A
LEU
139
n
67
LEU
139
A
PHE
140
n
68
PHE
140
A
ILE
141
n
69
ILE
141
A
PRO
142
n
70
PRO
142
A
ASN
143
n
71
ASN
143
A
TYR
144
n
72
TYR
144
A
GLY
145
n
73
GLY
145
A
LEU
146
n
74
LEU
146
A
GLY
147
n
75
GLY
147
A
VAL
148
n
76
VAL
148
A
VAL
149
n
77
VAL
149
A
ALA
150
n
78
ALA
150
A
ASP
151
n
79
ASP
151
A
THR
152
n
80
THR
152
A
GLY
153
n
81
GLY
153
A
SER
154
n
82
SER
154
A
ALA
155
n
83
ALA
155
A
ILE
156
n
84
ILE
156
A
LYS
157
n
85
LYS
157
A
GLY
158
n
86
GLY
158
A
ASN
159
n
87
ASN
159
A
ARG
160
n
88
ARG
160
A
LEU
161
n
89
LEU
161
A
ASP
162
n
90
ASP
162
A
LEU
163
n
91
LEU
163
A
TYR
164
n
92
TYR
164
A
PHE
165
n
93
PHE
165
A
GLU
166
n
94
GLU
166
A
THR
167
n
95
THR
167
A
VAL
168
n
96
VAL
168
A
LYS
169
n
97
LYS
169
A
ASP
170
n
98
ASP
170
A
VAL
171
n
99
VAL
171
A
TYR
172
n
100
TYR
172
A
ASN
173
n
101
ASN
173
A
GLU
174
n
102
GLU
174
A
TRP
175
n
103
TRP
175
A
GLY
176
n
104
GLY
176
A
LYS
177
n
105
LYS
177
A
LYS
178
n
106
LYS
178
A
THR
179
n
107
THR
179
A
LEU
180
n
108
LEU
180
A
ASP
181
n
109
ASP
181
A
VAL
182
n
110
VAL
182
A
TYR
183
n
111
TYR
183
A
VAL
184
n
112
VAL
184
A
ILE
185
n
113
ILE
185
A
LYS
186
n
114
LYS
186
A
LYS
187
n
115
LYS
187
A
GLY
188
n
116
GLY
188
A
THR
189
n
117
THR
189
A
GLY
190
n
118
GLY
190
A
LYS
191
n
119
LYS
191
A
ILE
192
n
120
ILE
192
A
THR
193
n
121
THR
193
A
GLU
194
n
122
GLU
194
A
ASP
195
n
123
ASP
195
A
GLU
196
n
124
GLU
196
A
LEU
197
n
125
LEU
197
A
GLU
198
n
126
GLU
198
A
LYS
199
n
127
LYS
199
A
LEU
200
n
128
LEU
200
A
ASN
201
n
129
ASN
201
A
GLU
202
n
130
GLU
202
A
THR
203
n
131
THR
203
A
LYS
204
n
132
LYS
204
A
SER
205
n
133
SER
205
A
LEU
206
n
134
LEU
206
A
GLN
207
n
135
GLN
207
A
VAL
208
n
136
VAL
208
A
PHE
209
n
137
PHE
209
A
ARG
210
n
138
ARG
210
A
ASN
211
n
139
ASN
211
A
GLN
212
n
140
GLN
212
A
TYR
213
n
141
TYR
213
A
LYS
214
n
142
LYS
214
A
n
143
215
A
n
144
216
A
n
145
217
A
n
146
218
A
2.9040
-0.0470
-0.1356
0.7235
-0.7122
1.3238
0.0586
0.1107
0.4690
0.1215
-0.0516
0.0239
-0.0877
0.0601
0.0317
0.1611
-0.0070
0.0158
0.1758
0.0193
0.1968
refined
8.6462
26.2766
2.6285
X-RAY DIFFRACTION
0.5929
0.2642
0.5839
2.7514
0.9902
0.8141
0.0722
-0.1174
-0.1235
0.1995
-0.0405
0.0177
0.3382
0.0683
-0.0750
0.2494
-0.0031
0.0217
0.1514
0.0032
0.1526
refined
9.5249
6.2948
5.6423
X-RAY DIFFRACTION
1.0900
-0.5620
0.0603
1.2013
-0.3561
1.0438
0.0190
0.0899
-0.0044
-0.1804
0.0079
0.1054
0.0784
-0.0915
0.0089
0.1348
-0.0109
-0.0001
0.1380
0.0082
0.1265
refined
7.0367
19.3228
-1.2621
X-RAY DIFFRACTION
1.1047
-0.0846
-1.7880
2.2206
0.6505
3.0127
0.0722
-0.2064
0.0874
0.0225
-0.0190
-0.0376
0.0910
0.1887
-0.0483
0.1501
-0.0123
0.0012
0.2134
0.0047
0.1502
refined
3.9118
18.7285
12.4314
X-RAY DIFFRACTION
0.5494
1.0319
-0.2078
1.9407
-0.3179
2.7156
-0.1432
-0.0682
0.3006
-0.0303
0.1978
-0.1496
-0.0013
0.2605
-0.0522
0.1419
-0.0198
0.0123
0.1512
-0.0435
0.1747
refined
-4.8494
28.7512
28.7186
X-RAY DIFFRACTION
1.3024
0.3017
-0.1986
2.5420
1.2213
1.9063
-0.0944
-0.4111
-0.0878
0.4174
0.1827
0.3966
0.2472
-0.0010
0.0034
0.2500
0.0032
0.0639
0.2335
0.0217
0.1757
refined
-15.2113
14.9162
38.5794
X-RAY DIFFRACTION
1.4835
-1.3141
0.6182
6.7847
-2.5675
0.9840
-0.0096
-0.1153
-0.2191
0.0644
-0.0239
0.7690
0.2310
-0.2688
0.0449
0.1582
-0.0249
0.0505
0.1876
-0.0251
0.2547
refined
-21.2812
11.6669
29.0655
X-RAY DIFFRACTION
2.7923
-0.7686
-0.5108
3.4940
0.4185
3.9040
-0.0272
0.6448
0.1155
-0.4840
-0.2517
0.0879
-0.0998
-0.0451
0.1972
0.2377
0.0163
-0.0568
0.3182
-0.0206
0.2429
refined
-22.2909
21.1266
20.0430
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 73 through 102 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 103 through 122 )
X-RAY DIFFRACTION
3
chain 'A' and (resid 123 through 159 )
X-RAY DIFFRACTION
4
chain 'A' and (resid 160 through 175 )
X-RAY DIFFRACTION
5
chain 'A' and (resid 176 through 185 )
X-RAY DIFFRACTION
6
chain 'A' and (resid 186 through 193 )
X-RAY DIFFRACTION
7
chain 'A' and (resid 194 through 201 )
X-RAY DIFFRACTION
8
chain 'A' and (resid 202 through 214 )
author_and_software_defined_assembly
PISA
2
dimeric
9470
-37
14280
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_555
-x,y,-z+1/2
crystal symmetry operation
0.0000000000
0.0000000000
30.5000000000
A
N
THR
91
A
N
THR
19
A
O
LEU
163
A
O
LEU
91
A
O
ASP
162
A
O
ASP
90
A
N
ALA
127
A
N
ALA
55
A
N
SER
124
A
N
SER
52
A
O
VAL
148
A
O
VAL
76
A
O
GLY
147
A
O
GLY
75
A
N
LEU
139
A
N
LEU
67
1
A
HOH
438
F
HOH
1
A
HOH
476
F
HOH
1
A
ALA
97
A
ALA
25
1
Y
1
A
GLU
98
A
GLU
26
1
Y
1
A
SER
99
A
SER
27
1
Y
1
A
THR
100
A
THR
28
1
Y
1
A
THR
215
A
THR
143
1
Y
1
A
VAL
216
A
VAL
144
1
Y
1
A
LYS
217
A
LYS
145
1
Y
1
A
GLU
218
A
GLU
146
1
Y
1
A
A
O
O
HOH
HOH
433
467
1.82
1
A
A
O
O
HOH
HOH
496
526
1.94
1
A
A
O
O
HOH
HOH
467
467
2.09
1_555
3_555
1
A
TYR
144
-121.61
-57.01
0.2015
0.1622
0.1642
1.760
30.798
927
18131
5.11
99.68
0.16
1
FREE R-VALUE
1.36
MOLECULAR REPLACEMENT
18.94
0.90
1.11
4WJT
ML
FLAT BULK SOLVENT MODEL
1.760
30.798
128
1233
16
0
1089
0.016
1161
1.495
1574
12.586
434
0.068
172
0.009
202
0.2475
0.2008
1.8529
126
2403
100.00
0.2351
0.1894
1.9689
134
2414
100.00
0.2202
0.1623
2.1209
120
2442
100.00
0.1741
0.1490
2.3343
139
2424
99.00
0.2144
0.1557
2.6719
126
2469
100.00
0.1899
0.1686
3.3656
152
2469
100.00
0.1973
0.1546
30.8027
130
2583
99.00
1.76
30.8
4WLI
18150
0.098
1
13.0
7.3
99.8
0.745
1.76
1.79
2.5
1
7.7
99.6
refinement
PHENIX
(phenix.refine: 1.9_1692)
phasing
PHASER
data scaling
Aimless
data reduction
XDS
Stationary Phase Survival Protein YuiC from B.subtilis
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
A
PRO
73
A
PRO
1
HELX_P
A
PHE
78
A
PHE
6
1
AA1
6
A
ASP
79
A
ASP
7
HELX_P
A
TYR
83
A
TYR
11
5
AA2
5
A
THR
167
A
THR
95
HELX_P
A
GLY
176
A
GLY
104
1
AA3
10
A
THR
193
A
THR
121
HELX_P
A
GLU
202
A
GLU
130
1
AA4
10
A
THR
203
A
THR
131
HELX_P
A
SER
205
A
SER
133
5
AA5
3
A
LEU
206
A
LEU
134
HELX_P
A
LYS
214
A
LYS
142
1
AA6
9
LYASE
lytic transglycosylase, peptidoglycan remodelling, stationary phase, MltA, lyase
YUIC_BACSU
UNP
1
73
O32108
PLEEAFDWDEYPVQRVTATGYTAGAESTGKNPGDPLYGLTYSGVKVKRDLYSTVAADPSVFPIGTILFIPNYGLGVVADT
GSAIKGNRLDLYFETVKDVYNEWGKKTLDVYVIKKGTGKITEDELEKLNETKSLQVFRNQYKTVKE
73
218
4WLI
73
218
O32108
A
1
1
146
5
parallel
anti-parallel
parallel
anti-parallel
A
THR
89
A
THR
17
A
TYR
93
A
TYR
21
A
ARG
160
A
ARG
88
A
TYR
164
A
TYR
92
A
TYR
123
A
TYR
51
A
ALA
128
A
ALA
56
A
GLY
145
A
GLY
73
A
ASP
151
A
ASP
79
A
ILE
138
A
ILE
66
A
ILE
141
A
ILE
69
binding site for residue EDO A 301
A
EDO
301
Software
7
binding site for residue EDO A 302
A
EDO
302
Software
5
binding site for residue EDO A 303
A
EDO
303
Software
5
binding site for residue EDO A 304
A
EDO
304
Software
7
A
TYR
93
A
TYR
21
7
1_555
A
ALA
127
A
ALA
55
7
1_555
A
ASP
151
A
ASP
79
7
1_555
A
THR
152
A
THR
80
7
1_555
A
GLY
153
A
GLY
81
7
1_555
A
ASP
162
A
ASP
90
7
1_555
A
EDO
304
E
EDO
7
1_555
A
ARG
87
A
ARG
15
5
3_555
A
LYS
177
A
LYS
105
5
1_555
A
THR
179
A
THR
107
5
1_555
A
ASP
181
A
ASP
109
5
1_555
A
HOH
424
F
HOH
5
1_555
A
GLN
86
A
GLN
14
5
6_455
A
ARG
87
A
ARG
15
5
6_455
A
ASN
159
A
ASN
87
5
6_455
A
SER
205
A
SER
133
5
1_555
A
VAL
208
A
VAL
136
5
1_555
A
ALA
95
A
ALA
23
7
1_555
A
GLY
96
A
GLY
24
7
1_555
A
LEU
111
A
LEU
39
7
1_555
A
ASP
151
A
ASP
79
7
1_555
A
EDO
301
B
EDO
7
1_555
A
HOH
485
F
HOH
7
1_555
A
HOH
500
F
HOH
7
1_555
20
C 2 2 21