0.013742
0.000000
0.003070
-0.000000
0.026035
0.000000
0.000000
-0.000000
0.021201
0.000000
0.000000
0.000000
CLIFTON, M.C.
EDWARDS, T.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
102.600
90.000
72.770
38.410
48.330
C37 H36 N6 O4
628.720
7-[2-(1H-imidazol-1-yl)-4-methylpyridin-3-yl]-3-[3-(naphthalen-1-yloxy)propyl]-1-[2-oxo-2-(piperazin-1-yl)ethyl]-1H-indole-2-carboxylic acid
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
H2 O7 P2 -2
175.959
PYROPHOSPHATE 2-
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
C
Y
2
N
C
Y
3
N
C
Y
4
N
C
Y
5
N
N
Y
6
N
C
Y
7
N
C
Y
8
N
C
Y
9
N
C
Y
10
N
C
Y
11
N
C
Y
12
N
C
Y
13
N
C
N
14
N
C
N
15
N
C
N
16
N
C
N
17
N
O
Y
18
N
C
Y
19
N
C
Y
20
N
C
Y
21
N
C
Y
22
N
C
Y
23
N
C
Y
24
N
C
Y
25
N
C
Y
26
N
C
Y
27
N
C
Y
28
N
C
N
29
N
C
N
30
N
O
N
31
N
O
Y
32
N
N
N
33
N
C
N
34
N
C
N
35
N
O
N
36
N
N
N
37
N
C
N
38
N
C
N
39
N
N
N
40
N
C
N
41
N
C
Y
42
N
C
Y
43
N
N
Y
44
N
C
Y
45
N
C
Y
46
N
N
Y
47
N
C
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
N
N
85
S
C
N
86
N
C
N
87
N
O
N
88
N
C
N
89
N
O
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
N
N
98
S
C
N
99
N
C
N
100
N
O
N
101
N
C
N
102
N
C
N
103
N
C
N
104
N
N
N
105
N
C
N
106
N
N
N
107
N
N
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
N
N
125
S
C
N
126
N
C
N
127
N
O
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
N
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
N
N
142
S
C
N
143
N
C
N
144
N
O
N
145
N
C
N
146
N
C
N
147
N
O
N
148
N
O
N
149
N
O
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
N
N
158
R
C
N
159
N
C
N
160
N
O
N
161
N
C
N
162
N
S
N
163
N
O
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
N
C
N
176
N
C
N
177
N
C
N
178
N
O
N
179
N
N
N
180
N
O
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
O
N
199
N
O
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
N
N
211
N
C
N
212
N
C
N
213
N
O
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
N
N
221
S
C
N
222
N
C
N
223
N
O
N
224
N
C
Y
225
N
C
Y
226
N
N
Y
227
N
C
Y
228
N
C
Y
229
N
N
N
230
N
O
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
S
C
N
249
N
C
N
250
N
C
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
N
C
N
271
N
C
N
272
N
C
N
273
N
C
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
N
N
289
S
C
N
290
N
C
N
291
N
O
N
292
N
C
N
293
N
C
N
294
N
C
N
295
N
C
N
296
N
N
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
N
N
314
S
C
N
315
N
C
N
316
N
O
N
317
N
C
N
318
N
C
N
319
N
S
N
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
N
N
334
S
C
N
335
N
C
N
336
N
O
N
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
N
344
N
O
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
P
N
357
N
O
N
358
N
O
N
359
N
O
N
360
N
O
N
361
N
P
N
362
N
O
N
363
N
O
N
364
N
O
N
365
N
H
N
366
N
H
N
367
N
N
N
368
S
C
N
369
N
C
N
370
N
O
N
371
N
C
N
372
N
C
N
373
N
C
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
N
C
N
389
N
O
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
R
C
N
403
N
O
N
404
N
C
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
N
N
416
S
C
N
417
N
C
N
418
N
O
N
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
N
Y
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
N
429
N
O
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
N
N
443
S
C
N
444
N
C
N
445
N
O
N
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
C
N
453
N
O
N
454
N
O
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
N
N
467
S
C
N
468
N
C
N
469
N
O
N
470
N
C
N
471
N
C
N
472
N
C
N
473
N
O
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
ZN
Y
1
N
doub
Y
2
N
sing
Y
3
N
sing
Y
4
N
doub
Y
5
N
doub
Y
6
N
sing
Y
7
N
sing
Y
8
N
sing
Y
9
N
doub
N
10
N
sing
Y
11
N
doub
Y
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
Y
17
N
doub
Y
18
N
sing
Y
19
N
sing
Y
20
N
sing
Y
21
N
doub
Y
22
N
doub
Y
23
N
doub
N
24
N
sing
Y
25
N
sing
Y
26
N
sing
Y
27
N
sing
N
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
Y
33
N
doub
Y
34
N
sing
Y
35
N
sing
Y
36
N
doub
Y
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
Y
41
N
sing
Y
42
N
doub
Y
43
N
doub
N
44
N
doub
Y
45
N
doub
N
46
N
sing
Y
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
doub
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
doub
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
doub
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
Y
229
N
sing
Y
230
N
doub
Y
231
N
doub
N
232
N
sing
Y
233
N
sing
N
234
N
sing
Y
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
doub
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
Y
337
N
doub
Y
338
N
sing
Y
339
N
sing
N
340
N
sing
Y
341
N
doub
N
342
N
sing
Y
343
N
doub
N
344
N
sing
Y
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
doub
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
doub
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
doub
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
doub
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
doub
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
Y
416
N
doub
Y
417
N
sing
Y
418
N
sing
N
419
N
sing
Y
420
N
doub
Y
421
N
sing
Y
422
N
sing
N
423
N
sing
Y
424
N
sing
Y
425
N
doub
N
426
N
sing
Y
427
N
doub
N
428
N
sing
Y
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
doub
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
Y
444
N
doub
Y
445
N
sing
Y
446
N
sing
N
447
N
sing
Y
448
N
doub
N
449
N
sing
Y
450
N
doub
N
451
N
sing
Y
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
doub
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
US
Plos One
1932-6203
10
e0125010
e0125010
10.1371/journal.pone.0125010
25909780
A Maltose-Binding Protein Fusion Construct Yields a Robust Crystallography Platform for MCL1.
2015
10.2210/pdb4wmr/pdb
pdb_00004wmr
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
100.0
1
CCD
2013-07-18
RIGAKU SATURN 944+
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
RIGAKU FR-E+ SUPERBRIGHT
17164.641
Induced myeloid leukemia cell differentiation protein Mcl-1
1
man
polymer
65.409
ZINC ION
3
syn
non-polymer
628.720
7-[2-(1H-imidazol-1-yl)-4-methylpyridin-3-yl]-3-[3-(naphthalen-1-yloxy)propyl]-1-[2-oxo-2-(piperazin-1-yl)ethyl]-1H-indole-2-carboxylic acid
1
syn
non-polymer
175.959
PYROPHOSPHATE 2-
2
syn
non-polymer
18.015
water
123
nat
water
Bcl-2-like protein 3,Bcl2-L-3,Bcl-2-related protein EAT/mcl1,mcl1/EAT
no
no
SELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMI
HVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHV
SELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMI
HVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHV
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
150
MCL1, BCL2L3
9606
Homo sapiens
562
Escherichia coli
PLASMID
Biological sequence
1
1.950
36.840
VAPOR DIFFUSION, SITTING DROP
7.0
10 mg/ml MCL1, 16% PEG8000, 20% GLYCEROL, 40MM KH2PO4, 2MM ligand 1, 2MM ZINC CHLORIDE, 9.98 MG/ML MCL1
298
chem_comp_atom
chem_comp_bond
database_2
entity_src_gen
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_assembly_prop
pdbx_struct_conn_angle
pdbx_struct_oper_list
refine_hist
struct_conn
struct_keywords
repository
Initial release
Data collection
Database references
Derived calculations
Other
Refinement description
Source and taxonomy
Structure summary
1
0
2015-05-06
1
1
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_entity_src_gen.pdbx_alt_source_flag
_pdbx_database_status.pdb_format_compatible
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.value
_pdbx_struct_oper_list.symmetry_operation
_refine_hist.number_atoms_total
_refine_hist.pdbx_number_atoms_nucleic_acid
_refine_hist.pdbx_number_atoms_protein
_struct_conn.pdbx_dist_value
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_keywords.text
N
RCSB
Y
RCSB
2014-10-09
REL
REL
1
A
O
HOH
615
6.10
ZN
ZINC ION
865
7-[2-(1H-imidazol-1-yl)-4-methylpyridin-3-yl]-3-[3-(naphthalen-1-yloxy)propyl]-1-[2-oxo-2-(piperazin-1-yl)ethyl]-1H-indole-2-carboxylic acid
POP
PYROPHOSPHATE 2-
HOH
water
ZN
1
2
ZN
ZN
401
A
ZN
2
2
ZN
ZN
402
A
ZN
3
2
ZN
ZN
403
A
865
1
3
865
865
404
A
POP
1
4
POP
POP
405
A
POP
2
4
POP
POP
406
A
HOH
50
5
HOH
HOH
501
A
HOH
139
5
HOH
HOH
502
A
HOH
96
5
HOH
HOH
503
A
HOH
71
5
HOH
HOH
504
A
HOH
144
5
HOH
HOH
505
A
HOH
73
5
HOH
HOH
506
A
HOH
11
5
HOH
HOH
507
A
HOH
132
5
HOH
HOH
508
A
HOH
106
5
HOH
HOH
509
A
HOH
60
5
HOH
HOH
510
A
HOH
86
5
HOH
HOH
511
A
HOH
115
5
HOH
HOH
512
A
HOH
14
5
HOH
HOH
513
A
HOH
92
5
HOH
HOH
514
A
HOH
44
5
HOH
HOH
515
A
HOH
12
5
HOH
HOH
516
A
HOH
118
5
HOH
HOH
517
A
HOH
1
5
HOH
HOH
518
A
HOH
37
5
HOH
HOH
519
A
HOH
69
5
HOH
HOH
520
A
HOH
99
5
HOH
HOH
521
A
HOH
15
5
HOH
HOH
522
A
HOH
18
5
HOH
HOH
523
A
HOH
45
5
HOH
HOH
524
A
HOH
81
5
HOH
HOH
525
A
HOH
17
5
HOH
HOH
526
A
HOH
28
5
HOH
HOH
527
A
HOH
52
5
HOH
HOH
528
A
HOH
5
5
HOH
HOH
529
A
HOH
147
5
HOH
HOH
530
A
HOH
53
5
HOH
HOH
531
A
HOH
102
5
HOH
HOH
532
A
HOH
138
5
HOH
HOH
533
A
HOH
23
5
HOH
HOH
534
A
HOH
10
5
HOH
HOH
535
A
HOH
21
5
HOH
HOH
536
A
HOH
142
5
HOH
HOH
537
A
HOH
16
5
HOH
HOH
538
A
HOH
137
5
HOH
HOH
539
A
HOH
125
5
HOH
HOH
540
A
HOH
117
5
HOH
HOH
541
A
HOH
41
5
HOH
HOH
542
A
HOH
128
5
HOH
HOH
543
A
HOH
80
5
HOH
HOH
544
A
HOH
74
5
HOH
HOH
545
A
HOH
29
5
HOH
HOH
546
A
HOH
56
5
HOH
HOH
547
A
HOH
136
5
HOH
HOH
548
A
HOH
121
5
HOH
HOH
549
A
HOH
70
5
HOH
HOH
550
A
HOH
46
5
HOH
HOH
551
A
HOH
7
5
HOH
HOH
552
A
HOH
88
5
HOH
HOH
553
A
HOH
130
5
HOH
HOH
554
A
HOH
66
5
HOH
HOH
555
A
HOH
122
5
HOH
HOH
556
A
HOH
62
5
HOH
HOH
557
A
HOH
110
5
HOH
HOH
558
A
HOH
42
5
HOH
HOH
559
A
HOH
90
5
HOH
HOH
560
A
HOH
126
5
HOH
HOH
561
A
HOH
95
5
HOH
HOH
562
A
HOH
82
5
HOH
HOH
563
A
HOH
25
5
HOH
HOH
564
A
HOH
109
5
HOH
HOH
565
A
HOH
123
5
HOH
HOH
566
A
HOH
39
5
HOH
HOH
567
A
HOH
27
5
HOH
HOH
568
A
HOH
113
5
HOH
HOH
569
A
HOH
97
5
HOH
HOH
570
A
HOH
120
5
HOH
HOH
571
A
HOH
101
5
HOH
HOH
572
A
HOH
114
5
HOH
HOH
573
A
HOH
119
5
HOH
HOH
574
A
HOH
64
5
HOH
HOH
575
A
HOH
116
5
HOH
HOH
576
A
HOH
105
5
HOH
HOH
577
A
HOH
65
5
HOH
HOH
578
A
HOH
131
5
HOH
HOH
579
A
HOH
6
5
HOH
HOH
580
A
HOH
8
5
HOH
HOH
581
A
HOH
9
5
HOH
HOH
582
A
HOH
13
5
HOH
HOH
583
A
HOH
19
5
HOH
HOH
584
A
HOH
20
5
HOH
HOH
585
A
HOH
22
5
HOH
HOH
586
A
HOH
24
5
HOH
HOH
587
A
HOH
26
5
HOH
HOH
588
A
HOH
30
5
HOH
HOH
589
A
HOH
31
5
HOH
HOH
590
A
HOH
32
5
HOH
HOH
591
A
HOH
33
5
HOH
HOH
592
A
HOH
34
5
HOH
HOH
593
A
HOH
35
5
HOH
HOH
594
A
HOH
38
5
HOH
HOH
595
A
HOH
40
5
HOH
HOH
596
A
HOH
43
5
HOH
HOH
597
A
HOH
47
5
HOH
HOH
598
A
HOH
51
5
HOH
HOH
599
A
HOH
55
5
HOH
HOH
600
A
HOH
58
5
HOH
HOH
601
A
HOH
59
5
HOH
HOH
602
A
HOH
61
5
HOH
HOH
603
A
HOH
63
5
HOH
HOH
604
A
HOH
76
5
HOH
HOH
605
A
HOH
78
5
HOH
HOH
606
A
HOH
79
5
HOH
HOH
607
A
HOH
83
5
HOH
HOH
608
A
HOH
87
5
HOH
HOH
609
A
HOH
91
5
HOH
HOH
610
A
HOH
93
5
HOH
HOH
611
A
HOH
98
5
HOH
HOH
612
A
HOH
103
5
HOH
HOH
613
A
HOH
111
5
HOH
HOH
614
A
HOH
112
5
HOH
HOH
615
A
HOH
127
5
HOH
HOH
616
A
HOH
129
5
HOH
HOH
617
A
HOH
140
5
HOH
HOH
618
A
HOH
141
5
HOH
HOH
619
A
HOH
143
5
HOH
HOH
620
A
HOH
145
5
HOH
HOH
621
A
HOH
146
5
HOH
HOH
622
A
HOH
148
5
HOH
HOH
623
A
SER
172
n
1
SER
172
A
GLU
173
n
2
GLU
173
A
LEU
174
n
3
LEU
174
A
TYR
175
n
4
TYR
175
A
ARG
176
n
5
ARG
176
A
GLN
177
n
6
GLN
177
A
SER
178
n
7
SER
178
A
LEU
179
n
8
LEU
179
A
GLU
180
n
9
GLU
180
A
ILE
181
n
10
ILE
181
A
ILE
182
n
11
ILE
182
A
SER
183
n
12
SER
183
A
ARG
184
n
13
ARG
184
A
TYR
185
n
14
TYR
185
A
LEU
186
n
15
LEU
186
A
ARG
187
n
16
ARG
187
A
GLU
188
n
17
GLU
188
A
GLN
189
n
18
GLN
189
A
ALA
190
n
19
ALA
190
A
THR
191
n
20
THR
191
A
GLY
192
n
21
GLY
192
A
ALA
193
n
22
ALA
193
A
LYS
194
n
23
LYS
194
A
ASP
195
n
24
ASP
195
A
THR
196
n
25
THR
196
A
LYS
197
n
26
LYS
197
A
PRO
198
n
27
PRO
198
A
MET
199
n
28
MET
199
A
GLY
200
n
29
GLY
200
A
ARG
201
n
30
ARG
201
A
SER
202
n
31
SER
202
A
GLY
203
n
32
GLY
203
A
ALA
204
n
33
ALA
204
A
THR
205
n
34
THR
205
A
SER
206
n
35
SER
206
A
ARG
207
n
36
ARG
207
A
LYS
208
n
37
LYS
208
A
ALA
209
n
38
ALA
209
A
LEU
210
n
39
LEU
210
A
GLU
211
n
40
GLU
211
A
THR
212
n
41
THR
212
A
LEU
213
n
42
LEU
213
A
ARG
214
n
43
ARG
214
A
ARG
215
n
44
ARG
215
A
VAL
216
n
45
VAL
216
A
GLY
217
n
46
GLY
217
A
ASP
218
n
47
ASP
218
A
GLY
219
n
48
GLY
219
A
VAL
220
n
49
VAL
220
A
GLN
221
n
50
GLN
221
A
ARG
222
n
51
ARG
222
A
ASN
223
n
52
ASN
223
A
HIS
224
n
53
HIS
224
A
GLU
225
n
54
GLU
225
A
THR
226
n
55
THR
226
A
ALA
227
n
56
ALA
227
A
PHE
228
n
57
PHE
228
A
GLN
229
n
58
GLN
229
A
GLY
230
n
59
GLY
230
A
MET
231
n
60
MET
231
A
LEU
232
n
61
LEU
232
A
ARG
233
n
62
ARG
233
A
LYS
234
n
63
LYS
234
A
LEU
235
n
64
LEU
235
A
ASP
236
n
65
ASP
236
A
ILE
237
n
66
ILE
237
A
LYS
238
n
67
LYS
238
A
ASN
239
n
68
ASN
239
A
GLU
240
n
69
GLU
240
A
ASP
241
n
70
ASP
241
A
ASP
242
n
71
ASP
242
A
VAL
243
n
72
VAL
243
A
LYS
244
n
73
LYS
244
A
SER
245
n
74
SER
245
A
LEU
246
n
75
LEU
246
A
SER
247
n
76
SER
247
A
ARG
248
n
77
ARG
248
A
VAL
249
n
78
VAL
249
A
MET
250
n
79
MET
250
A
ILE
251
n
80
ILE
251
A
HIS
252
n
81
HIS
252
A
VAL
253
n
82
VAL
253
A
PHE
254
n
83
PHE
254
A
SER
255
n
84
SER
255
A
ASP
256
n
85
ASP
256
A
GLY
257
n
86
GLY
257
A
VAL
258
n
87
VAL
258
A
THR
259
n
88
THR
259
A
ASN
260
n
89
ASN
260
A
TRP
261
n
90
TRP
261
A
GLY
262
n
91
GLY
262
A
ARG
263
n
92
ARG
263
A
ILE
264
n
93
ILE
264
A
VAL
265
n
94
VAL
265
A
THR
266
n
95
THR
266
A
LEU
267
n
96
LEU
267
A
ILE
268
n
97
ILE
268
A
SER
269
n
98
SER
269
A
PHE
270
n
99
PHE
270
A
GLY
271
n
100
GLY
271
A
ALA
272
n
101
ALA
272
A
PHE
273
n
102
PHE
273
A
VAL
274
n
103
VAL
274
A
ALA
275
n
104
ALA
275
A
LYS
276
n
105
LYS
276
A
HIS
277
n
106
HIS
277
A
LEU
278
n
107
LEU
278
A
LYS
279
n
108
LYS
279
A
THR
280
n
109
THR
280
A
ILE
281
n
110
ILE
281
A
ASN
282
n
111
ASN
282
A
GLN
283
n
112
GLN
283
A
GLU
284
n
113
GLU
284
A
SER
285
n
114
SER
285
A
CYS
286
n
115
CYS
286
A
ILE
287
n
116
ILE
287
A
GLU
288
n
117
GLU
288
A
PRO
289
n
118
PRO
289
A
LEU
290
n
119
LEU
290
A
ALA
291
n
120
ALA
291
A
GLU
292
n
121
GLU
292
A
SER
293
n
122
SER
293
A
ILE
294
n
123
ILE
294
A
THR
295
n
124
THR
295
A
ASP
296
n
125
ASP
296
A
VAL
297
n
126
VAL
297
A
LEU
298
n
127
LEU
298
A
VAL
299
n
128
VAL
299
A
ARG
300
n
129
ARG
300
A
THR
301
n
130
THR
301
A
LYS
302
n
131
LYS
302
A
ARG
303
n
132
ARG
303
A
ASP
304
n
133
ASP
304
A
TRP
305
n
134
TRP
305
A
LEU
306
n
135
LEU
306
A
VAL
307
n
136
VAL
307
A
LYS
308
n
137
LYS
308
A
GLN
309
n
138
GLN
309
A
ARG
310
n
139
ARG
310
A
GLY
311
n
140
GLY
311
A
TRP
312
n
141
TRP
312
A
ASP
313
n
142
ASP
313
A
GLY
314
n
143
GLY
314
A
PHE
315
n
144
PHE
315
A
VAL
316
n
145
VAL
316
A
GLU
317
n
146
GLU
317
A
PHE
318
n
147
PHE
318
A
PHE
319
n
148
PHE
319
A
HIS
320
n
149
HIS
320
A
VAL
321
n
150
VAL
321
A
0.7746
-0.4200
0.1847
1.3929
-0.0980
0.5302
-0.0009
-0.0185
-0.0497
0.0844
-0.0126
0.0638
-0.0031
-0.0536
0.0134
0.0113
-0.0023
0.0041
0.0117
-0.0008
0.0065
refined
-14.3290
-14.0102
12.0942
X-RAY DIFFRACTION
A
-10
A
9999
X-RAY DIFFRACTION
1
author_defined_assembly
1
monomeric
software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
2
dimeric
720
-112
7700
2240
-228
14500
1620
-83
14300
A
HIS
224
A
ND1
HIS
53
1_555
A
ZN
401
B
ZN
ZN
1_555
A
865
404
E
N46
865
1_555
112.8
A
HIS
224
A
ND1
HIS
53
1_555
A
ZN
401
B
ZN
ZN
1_555
A
POP
405
F
O2
POP
1_555
107.5
A
865
404
E
N46
865
1_555
A
ZN
401
B
ZN
ZN
1_555
A
POP
405
F
O2
POP
1_555
118.4
A
HIS
224
A
ND1
HIS
53
1_555
A
ZN
401
B
ZN
ZN
1_555
A
POP
405
F
O5
POP
1_555
106.5
A
865
404
E
N46
865
1_555
A
ZN
401
B
ZN
ZN
1_555
A
POP
405
F
O5
POP
1_555
106.8
A
POP
405
F
O2
POP
1_555
A
ZN
401
B
ZN
ZN
1_555
A
POP
405
F
O5
POP
1_555
103.8
A
HIS
252
A
NE2
HIS
81
1_555
A
ZN
402
C
ZN
ZN
1_555
A
ASP
256
A
OD2
ASP
85
1_555
110.0
A
HIS
252
A
NE2
HIS
81
1_555
A
ZN
402
C
ZN
ZN
1_555
A
POP
406
G
O2
POP
1_555
107.8
A
ASP
256
A
OD2
ASP
85
1_555
A
ZN
402
C
ZN
ZN
1_555
A
POP
406
G
O2
POP
1_555
113.3
A
POP
405
F
O3
POP
1_555
A
ZN
403
D
ZN
ZN
1_555
A
POP
405
F
O6
POP
1_555
105.0
A
POP
405
F
O3
POP
1_555
A
ZN
403
D
ZN
ZN
1_555
A
POP
405
F
O6
POP
2_555
116.2
A
POP
405
F
O6
POP
1_555
A
ZN
403
D
ZN
ZN
1_555
A
POP
405
F
O6
POP
2_555
107.8
A
POP
405
F
O3
POP
1_555
A
ZN
403
D
ZN
ZN
1_555
A
POP
405
F
O3
POP
2_555
107.2
A
POP
405
F
O6
POP
1_555
A
ZN
403
D
ZN
ZN
1_555
A
POP
405
F
O3
POP
2_555
116.2
A
POP
405
F
O6
POP
2_555
A
ZN
403
D
ZN
ZN
1_555
A
POP
405
F
O3
POP
2_555
105.0
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_555
-x,y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_556
-x,y,-z+1
crystal symmetry operation
-10.5428628567
0.0000000000
47.1660571045
1
A
ZN
403
D
ZN
1
A
OG
SER
172
A
OG
SER
1
1
Y
1
A
CG
LYS
194
A
CG
LYS
23
1
Y
1
A
CD
LYS
194
A
CD
LYS
23
1
Y
1
A
CE
LYS
194
A
CE
LYS
23
1
Y
1
A
NZ
LYS
194
A
NZ
LYS
23
1
Y
1
A
CG
LYS
197
A
CG
LYS
26
1
Y
1
A
CD
LYS
197
A
CD
LYS
26
1
Y
1
A
CE
LYS
197
A
CE
LYS
26
1
Y
1
A
NZ
LYS
197
A
NZ
LYS
26
1
Y
1
A
CG
ARG
201
A
CG
ARG
30
1
Y
1
A
CD
ARG
201
A
CD
ARG
30
1
Y
1
A
NE
ARG
201
A
NE
ARG
30
1
Y
1
A
CZ
ARG
201
A
CZ
ARG
30
1
Y
1
A
NH1
ARG
201
A
NH1
ARG
30
1
Y
1
A
NH2
ARG
201
A
NH2
ARG
30
1
Y
1
A
OG
SER
202
A
OG
SER
31
1
Y
1
A
CG
LYS
208
A
CG
LYS
37
1
Y
1
A
CD
LYS
208
A
CD
LYS
37
1
Y
1
A
CE
LYS
208
A
CE
LYS
37
1
Y
1
A
NZ
LYS
208
A
NZ
LYS
37
1
Y
1
A
CG
ARG
233
A
CG
ARG
62
1
Y
1
A
CD
ARG
233
A
CD
ARG
62
1
Y
1
A
NE
ARG
233
A
NE
ARG
62
1
Y
1
A
CZ
ARG
233
A
CZ
ARG
62
1
Y
1
A
NH1
ARG
233
A
NH1
ARG
62
1
Y
1
A
NH2
ARG
233
A
NH2
ARG
62
1
Y
1
A
CG
LYS
234
A
CG
LYS
63
1
Y
1
A
CD
LYS
234
A
CD
LYS
63
1
Y
1
A
CE
LYS
234
A
CE
LYS
63
1
Y
1
A
NZ
LYS
234
A
NZ
LYS
63
1
Y
1
A
CG
GLU
240
A
CG
GLU
69
1
Y
1
A
CD
GLU
240
A
CD
GLU
69
1
Y
1
A
OE1
GLU
240
A
OE1
GLU
69
1
Y
1
A
OE2
GLU
240
A
OE2
GLU
69
1
Y
1
A
CG
ASP
241
A
CG
ASP
70
1
Y
1
A
OD1
ASP
241
A
OD1
ASP
70
1
Y
1
A
OD2
ASP
241
A
OD2
ASP
70
1
Y
1
A
CG
LYS
244
A
CG
LYS
73
1
Y
1
A
CD
LYS
244
A
CD
LYS
73
1
Y
1
A
CE
LYS
244
A
CE
LYS
73
1
Y
1
A
NZ
LYS
244
A
NZ
LYS
73
1
Y
1
A
CG
ARG
248
A
CG
ARG
77
1
Y
1
A
CD
ARG
248
A
CD
ARG
77
1
Y
1
A
NE
ARG
248
A
NE
ARG
77
1
Y
1
A
CZ
ARG
248
A
CZ
ARG
77
1
Y
1
A
NH1
ARG
248
A
NH1
ARG
77
1
Y
1
A
NH2
ARG
248
A
NH2
ARG
77
1
Y
1
A
CG
ARG
303
A
CG
ARG
132
1
Y
1
A
CD
ARG
303
A
CD
ARG
132
1
Y
1
A
NE
ARG
303
A
NE
ARG
132
1
Y
1
A
CZ
ARG
303
A
CZ
ARG
132
1
Y
1
A
NH1
ARG
303
A
NH1
ARG
132
1
Y
1
A
NH2
ARG
303
A
NH2
ARG
132
1
Y
1
A
CG
LYS
308
A
CG
LYS
137
1
Y
1
A
CD
LYS
308
A
CD
LYS
137
1
Y
1
A
CE
LYS
308
A
CE
LYS
137
1
Y
1
A
NZ
LYS
308
A
NZ
LYS
137
1
Y
1
A
CG
GLU
317
A
CG
GLU
146
1
Y
1
A
CD
GLU
317
A
CD
GLU
146
1
Y
1
A
OE1
GLU
317
A
OE1
GLU
146
1
Y
1
A
OE2
GLU
317
A
OE2
GLU
146
1
Y
1
A
A
ZN
O4
ZN
POP
402
406
1.61
1
A
ARG
201
-68.27
-72.18
1
A
HIS
320
36.46
55.54
63.580
17.5500
5.980
0.1200
-0.0000
0.0100
-0.2800
-0.0000
0.1500
0.9600
0.9340
U VALUES : WITH TLS ADDED HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.2060
0.1690
0.1710
1.7000
47.1700
715
14164
14163
5.0000
97.3
3.8620
0.0700
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.1230
0.1150
0.8000
0.8000
1.2000
MAXIMUM LIKELIHOOD
MASK
1.7000
47.1700
123
1337
21.18
27.66
68
0
1146
150
0.006
0.019
1280
0.001
0.020
1167
1.420
1.996
1758
0.756
3.000
2666
4.100
5.000
167
33.056
23.455
55
11.731
15.000
200
19.460
15.000
10
0.058
0.200
193
0.004
0.020
1475
0.001
0.020
313
0.639
1.264
617
0.637
1.264
616
1.163
1.891
774
0.2450
0.2000
1.7400
42
887
929
20
84.9200
23.470
1.000
1.700
50.000
4WMR
14163
-3.000
0.045
0.048
0.990
1
30.400
129144
9.100
97.300
1.000
0.291
1.700
1.740
4.200
2334
185
184
0.029
1
0
84.800
data reduction
XDS
refinement
REFMAC
5.7.0032
data extraction
PDB_EXTRACT
3.15
STRUCTURE OF MCL1 BOUND TO BRD inhibitor ligand 1 AT 1.7A
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
A
SER
172
A
SER
1
HELX_P
A
GLY
192
A
GLY
21
1
AA1
21
A
SER
202
A
SER
31
HELX_P
A
HIS
224
A
HIS
53
1
AA2
23
A
HIS
224
A
HIS
53
HELX_P
A
ASP
236
A
ASP
65
1
AA3
13
A
ASN
239
A
ASN
68
HELX_P
A
ASP
256
A
ASP
85
1
AA4
18
A
ASN
260
A
ASN
89
HELX_P
A
ILE
281
A
ILE
110
1
AA5
22
A
GLN
283
A
GLN
112
HELX_P
A
SER
285
A
SER
114
5
AA6
3
A
CYS
286
A
CYS
115
HELX_P
A
LYS
302
A
LYS
131
1
AA7
17
A
LYS
302
A
LYS
131
HELX_P
A
GLN
309
A
GLN
138
1
AA8
8
A
ARG
310
A
ARG
139
HELX_P
A
HIS
320
A
HIS
149
1
AA9
11
metalc
2.055
A
HIS
224
A
ND1
HIS
53
1_555
A
ZN
401
B
ZN
ZN
1_555
metalc
2.122
A
HIS
252
A
NE2
HIS
81
1_555
A
ZN
402
C
ZN
ZN
1_555
metalc
2.018
A
ASP
256
A
OD2
ASP
85
1_555
A
ZN
402
C
ZN
ZN
1_555
metalc
1.995
A
ZN
401
B
ZN
ZN
1_555
A
865
404
E
N46
865
1_555
metalc
1.882
A
ZN
401
B
ZN
ZN
1_555
A
POP
405
F
O2
POP
1_555
metalc
1.847
A
ZN
401
B
ZN
ZN
1_555
A
POP
405
F
O5
POP
1_555
metalc
2.287
A
ZN
402
C
ZN
ZN
1_555
A
POP
406
G
O2
POP
1_555
metalc
1.850
A
ZN
403
D
ZN
ZN
1_555
A
POP
405
F
O3
POP
1_555
metalc
2.004
A
ZN
403
D
ZN
ZN
1_555
A
POP
405
F
O6
POP
1_555
metalc
2.004
A
ZN
403
D
ZN
ZN
1_555
A
POP
405
F
O6
POP
2_555
metalc
1.850
A
ZN
403
D
ZN
ZN
1_555
A
POP
405
F
O3
POP
2_555
Apoptosis/Inhibitor
Apoptosis, protein-protein interaction, Apoptosis-Inhibitor complex
MCL1_HUMAN
UNP
1
173
Q07820
ELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIH
VFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHV
173
321
4WMR
173
321
Q07820
A
1
2
150
1
expression tag
SER
172
4WMR
A
Q07820
UNP
1
binding site for residue ZN A 401
A
ZN
401
Software
3
binding site for residue ZN A 402
A
ZN
402
Software
3
binding site for residue ZN A 403
A
ZN
403
Software
2
binding site for residue 865 A 404
A
865
404
Software
18
binding site for residue POP A 405
A
POP
405
Software
10
binding site for residue POP A 406
A
POP
406
Software
7
A
HIS
224
A
HIS
53
3
1_555
A
865
404
E
865
3
1_555
A
POP
405
F
POP
3
1_555
A
HIS
252
A
HIS
81
3
1_555
A
ASP
256
A
ASP
85
3
1_555
A
POP
406
G
POP
3
1_555
A
POP
405
F
POP
2
1_555
A
POP
405
F
POP
2
2_555
A
HIS
224
A
HIS
53
18
1_555
A
THR
226
A
THR
55
18
2_555
A
ALA
227
A
ALA
56
18
1_555
A
LEU
246
A
LEU
75
18
1_555
A
MET
250
A
MET
79
18
1_555
A
VAL
253
A
VAL
82
18
1_555
A
ARG
263
A
ARG
92
18
1_555
A
THR
266
A
THR
95
18
1_555
A
LEU
267
A
LEU
96
18
1_555
A
PHE
270
A
PHE
99
18
1_555
A
GLY
271
A
GLY
100
18
1_555
A
ZN
401
B
ZN
18
1_555
A
POP
405
F
POP
18
2_555
A
POP
405
F
POP
18
1_555
A
HOH
560
H
HOH
18
2_555
A
HOH
584
H
HOH
18
1_555
A
HOH
587
H
HOH
18
1_555
A
HOH
601
H
HOH
18
1_555
A
HIS
224
A
HIS
53
10
1_555
A
ZN
401
B
ZN
10
1_555
A
ZN
403
D
ZN
10
2_555
A
ZN
403
D
ZN
10
1_555
A
865
404
E
865
10
2_555
A
865
404
E
865
10
1_555
A
HOH
512
H
HOH
10
1_555
A
HOH
518
H
HOH
10
1_555
A
HOH
560
H
HOH
10
1_555
A
HOH
601
H
HOH
10
1_555
A
SER
172
A
SER
1
7
2_556
A
HIS
252
A
HIS
81
7
1_555
A
ASP
256
A
ASP
85
7
1_555
A
ARG
300
A
ARG
129
7
2_556
A
ZN
402
C
ZN
7
1_555
A
HOH
540
H
HOH
7
1_555
A
HOH
617
H
HOH
7
1_555
5
C 1 2 1