0.013742 0.000000 0.003070 -0.000000 0.026035 0.000000 0.000000 -0.000000 0.021201 0.000000 0.000000 0.000000 CLIFTON, M.C. EDWARDS, T.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 102.600 90.000 72.770 38.410 48.330 C37 H36 N6 O4 628.720 7-[2-(1H-imidazol-1-yl)-4-methylpyridin-3-yl]-3-[3-(naphthalen-1-yloxy)propyl]-1-[2-oxo-2-(piperazin-1-yl)ethyl]-1H-indole-2-carboxylic acid non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking H2 O7 P2 -2 175.959 PYROPHOSPHATE 2- non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N C Y 2 N C Y 3 N C Y 4 N C Y 5 N N Y 6 N C Y 7 N C Y 8 N C Y 9 N C Y 10 N C Y 11 N C Y 12 N C Y 13 N C N 14 N C N 15 N C N 16 N C N 17 N O Y 18 N C Y 19 N C Y 20 N C Y 21 N C Y 22 N C Y 23 N C Y 24 N C Y 25 N C Y 26 N C Y 27 N C Y 28 N C N 29 N C N 30 N O N 31 N O Y 32 N N N 33 N C N 34 N C N 35 N O N 36 N N N 37 N C N 38 N C N 39 N N N 40 N C N 41 N C Y 42 N C Y 43 N N Y 44 N C Y 45 N C Y 46 N N Y 47 N C N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N N N 85 S C N 86 N C N 87 N O N 88 N C N 89 N O N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N N N 98 S C N 99 N C N 100 N O N 101 N C N 102 N C N 103 N C N 104 N N N 105 N C N 106 N N N 107 N N N 108 N O N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N N N 125 S C N 126 N C N 127 N O N 128 N C N 129 N C N 130 N O N 131 N N N 132 N O N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N N N 142 S C N 143 N C N 144 N O N 145 N C N 146 N C N 147 N O N 148 N O N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N N N 158 R C N 159 N C N 160 N O N 161 N C N 162 N S N 163 N O N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N N N 172 S C N 173 N C N 174 N O N 175 N C N 176 N C N 177 N C N 178 N O N 179 N N N 180 N O N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N O N 199 N O N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N N N 211 N C N 212 N C N 213 N O N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N N N 221 S C N 222 N C N 223 N O N 224 N C Y 225 N C Y 226 N N Y 227 N C Y 228 N C Y 229 N N N 230 N O N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N O N 242 N H N 243 N H N 244 N N N 245 S C N 246 N C N 247 N O N 248 S C N 249 N C N 250 N C N 251 N C N 252 N O N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N N N 267 S C N 268 N C N 269 N O N 270 N C N 271 N C N 272 N C N 273 N C N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N N N 289 S C N 290 N C N 291 N O N 292 N C N 293 N C N 294 N C N 295 N C N 296 N N N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N N N 314 S C N 315 N C N 316 N O N 317 N C N 318 N C N 319 N S N 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N N N 334 S C N 335 N C N 336 N O N 337 N C Y 338 N C Y 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C N 344 N O N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N P N 357 N O N 358 N O N 359 N O N 360 N O N 361 N P N 362 N O N 363 N O N 364 N O N 365 N H N 366 N H N 367 N N N 368 S C N 369 N C N 370 N O N 371 N C N 372 N C N 373 N C N 374 N O N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N N N 385 S C N 386 N C N 387 N O N 388 N C N 389 N O N 390 N O N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N N N 399 S C N 400 N C N 401 N O N 402 R C N 403 N O N 404 N C N 405 N O N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N N N 416 S C N 417 N C N 418 N O N 419 N C Y 420 N C Y 421 N C Y 422 N C Y 423 N N Y 424 N C Y 425 N C Y 426 N C Y 427 N C Y 428 N C N 429 N O N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N N N 443 S C N 444 N C N 445 N O N 446 N C Y 447 N C Y 448 N C Y 449 N C Y 450 N C Y 451 N C Y 452 N C N 453 N O N 454 N O N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N N N 467 S C N 468 N C N 469 N O N 470 N C N 471 N C N 472 N C N 473 N O N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N ZN Y 1 N doub Y 2 N sing Y 3 N sing Y 4 N doub Y 5 N doub Y 6 N sing Y 7 N sing Y 8 N sing Y 9 N doub N 10 N sing Y 11 N doub Y 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing Y 17 N doub Y 18 N sing Y 19 N sing Y 20 N sing Y 21 N doub Y 22 N doub Y 23 N doub N 24 N sing Y 25 N sing Y 26 N sing Y 27 N sing N 28 N doub N 29 N sing N 30 N sing N 31 N sing N 32 N sing Y 33 N doub Y 34 N sing Y 35 N sing Y 36 N doub Y 37 N sing Y 38 N sing N 39 N sing N 40 N sing Y 41 N sing Y 42 N doub Y 43 N doub N 44 N doub Y 45 N doub N 46 N sing Y 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N doub N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N doub N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N doub N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N doub N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N doub N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N doub N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing Y 229 N sing Y 230 N doub Y 231 N doub N 232 N sing Y 233 N sing N 234 N sing Y 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N doub N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N doub N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N doub N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N doub N 333 N sing N 334 N sing N 335 N sing N 336 N sing Y 337 N doub Y 338 N sing Y 339 N sing N 340 N sing Y 341 N doub N 342 N sing Y 343 N doub N 344 N sing Y 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N doub N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N doub N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N doub N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N doub N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N doub N 412 N sing N 413 N sing N 414 N sing N 415 N sing Y 416 N doub Y 417 N sing Y 418 N sing N 419 N sing Y 420 N doub Y 421 N sing Y 422 N sing N 423 N sing Y 424 N sing Y 425 N doub N 426 N sing Y 427 N doub N 428 N sing Y 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N doub N 440 N sing N 441 N sing N 442 N sing N 443 N sing Y 444 N doub Y 445 N sing Y 446 N sing N 447 N sing Y 448 N doub N 449 N sing Y 450 N doub N 451 N sing Y 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N doub N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing US Plos One 1932-6203 10 e0125010 e0125010 10.1371/journal.pone.0125010 25909780 A Maltose-Binding Protein Fusion Construct Yields a Robust Crystallography Platform for MCL1. 2015 10.2210/pdb4wmr/pdb pdb_00004wmr 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 100.0 1 CCD 2013-07-18 RIGAKU SATURN 944+ SINGLE WAVELENGTH M x-ray 1 1.54 1.0 1.54 ROTATING ANODE RIGAKU FR-E+ SUPERBRIGHT 17164.641 Induced myeloid leukemia cell differentiation protein Mcl-1 1 man polymer 65.409 ZINC ION 3 syn non-polymer 628.720 7-[2-(1H-imidazol-1-yl)-4-methylpyridin-3-yl]-3-[3-(naphthalen-1-yloxy)propyl]-1-[2-oxo-2-(piperazin-1-yl)ethyl]-1H-indole-2-carboxylic acid 1 syn non-polymer 175.959 PYROPHOSPHATE 2- 2 syn non-polymer 18.015 water 123 nat water Bcl-2-like protein 3,Bcl2-L-3,Bcl-2-related protein EAT/mcl1,mcl1/EAT no no SELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMI HVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHV SELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMI HVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 150 MCL1, BCL2L3 9606 Homo sapiens 562 Escherichia coli PLASMID Biological sequence 1 1.950 36.840 VAPOR DIFFUSION, SITTING DROP 7.0 10 mg/ml MCL1, 16% PEG8000, 20% GLYCEROL, 40MM KH2PO4, 2MM ligand 1, 2MM ZINC CHLORIDE, 9.98 MG/ML MCL1 298 chem_comp_atom chem_comp_bond database_2 entity_src_gen pdbx_database_status pdbx_struct_assembly pdbx_struct_assembly_prop pdbx_struct_conn_angle pdbx_struct_oper_list refine_hist struct_conn struct_keywords repository Initial release Data collection Database references Derived calculations Other Refinement description Source and taxonomy Structure summary 1 0 2015-05-06 1 1 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _entity_src_gen.pdbx_alt_source_flag _pdbx_database_status.pdb_format_compatible _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.value _pdbx_struct_oper_list.symmetry_operation _refine_hist.number_atoms_total _refine_hist.pdbx_number_atoms_nucleic_acid _refine_hist.pdbx_number_atoms_protein _struct_conn.pdbx_dist_value _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_keywords.text N RCSB Y RCSB 2014-10-09 REL REL 1 A O HOH 615 6.10 ZN ZINC ION 865 7-[2-(1H-imidazol-1-yl)-4-methylpyridin-3-yl]-3-[3-(naphthalen-1-yloxy)propyl]-1-[2-oxo-2-(piperazin-1-yl)ethyl]-1H-indole-2-carboxylic acid POP PYROPHOSPHATE 2- HOH water ZN 1 2 ZN ZN 401 A ZN 2 2 ZN ZN 402 A ZN 3 2 ZN ZN 403 A 865 1 3 865 865 404 A POP 1 4 POP POP 405 A POP 2 4 POP POP 406 A HOH 50 5 HOH HOH 501 A HOH 139 5 HOH HOH 502 A HOH 96 5 HOH HOH 503 A HOH 71 5 HOH HOH 504 A HOH 144 5 HOH HOH 505 A HOH 73 5 HOH HOH 506 A HOH 11 5 HOH HOH 507 A HOH 132 5 HOH HOH 508 A HOH 106 5 HOH HOH 509 A HOH 60 5 HOH HOH 510 A HOH 86 5 HOH HOH 511 A HOH 115 5 HOH HOH 512 A HOH 14 5 HOH HOH 513 A HOH 92 5 HOH HOH 514 A HOH 44 5 HOH HOH 515 A HOH 12 5 HOH HOH 516 A HOH 118 5 HOH HOH 517 A HOH 1 5 HOH HOH 518 A HOH 37 5 HOH HOH 519 A HOH 69 5 HOH HOH 520 A HOH 99 5 HOH HOH 521 A HOH 15 5 HOH HOH 522 A HOH 18 5 HOH HOH 523 A HOH 45 5 HOH HOH 524 A HOH 81 5 HOH HOH 525 A HOH 17 5 HOH HOH 526 A HOH 28 5 HOH HOH 527 A HOH 52 5 HOH HOH 528 A HOH 5 5 HOH HOH 529 A HOH 147 5 HOH HOH 530 A HOH 53 5 HOH HOH 531 A HOH 102 5 HOH HOH 532 A HOH 138 5 HOH HOH 533 A HOH 23 5 HOH HOH 534 A HOH 10 5 HOH HOH 535 A HOH 21 5 HOH HOH 536 A HOH 142 5 HOH HOH 537 A HOH 16 5 HOH HOH 538 A HOH 137 5 HOH HOH 539 A HOH 125 5 HOH HOH 540 A HOH 117 5 HOH HOH 541 A HOH 41 5 HOH HOH 542 A HOH 128 5 HOH HOH 543 A HOH 80 5 HOH HOH 544 A HOH 74 5 HOH HOH 545 A HOH 29 5 HOH HOH 546 A HOH 56 5 HOH HOH 547 A HOH 136 5 HOH HOH 548 A HOH 121 5 HOH HOH 549 A HOH 70 5 HOH HOH 550 A HOH 46 5 HOH HOH 551 A HOH 7 5 HOH HOH 552 A HOH 88 5 HOH HOH 553 A HOH 130 5 HOH HOH 554 A HOH 66 5 HOH HOH 555 A HOH 122 5 HOH HOH 556 A HOH 62 5 HOH HOH 557 A HOH 110 5 HOH HOH 558 A HOH 42 5 HOH HOH 559 A HOH 90 5 HOH HOH 560 A HOH 126 5 HOH HOH 561 A HOH 95 5 HOH HOH 562 A HOH 82 5 HOH HOH 563 A HOH 25 5 HOH HOH 564 A HOH 109 5 HOH HOH 565 A HOH 123 5 HOH HOH 566 A HOH 39 5 HOH HOH 567 A HOH 27 5 HOH HOH 568 A HOH 113 5 HOH HOH 569 A HOH 97 5 HOH HOH 570 A HOH 120 5 HOH HOH 571 A HOH 101 5 HOH HOH 572 A HOH 114 5 HOH HOH 573 A HOH 119 5 HOH HOH 574 A HOH 64 5 HOH HOH 575 A HOH 116 5 HOH HOH 576 A HOH 105 5 HOH HOH 577 A HOH 65 5 HOH HOH 578 A HOH 131 5 HOH HOH 579 A HOH 6 5 HOH HOH 580 A HOH 8 5 HOH HOH 581 A HOH 9 5 HOH HOH 582 A HOH 13 5 HOH HOH 583 A HOH 19 5 HOH HOH 584 A HOH 20 5 HOH HOH 585 A HOH 22 5 HOH HOH 586 A HOH 24 5 HOH HOH 587 A HOH 26 5 HOH HOH 588 A HOH 30 5 HOH HOH 589 A HOH 31 5 HOH HOH 590 A HOH 32 5 HOH HOH 591 A HOH 33 5 HOH HOH 592 A HOH 34 5 HOH HOH 593 A HOH 35 5 HOH HOH 594 A HOH 38 5 HOH HOH 595 A HOH 40 5 HOH HOH 596 A HOH 43 5 HOH HOH 597 A HOH 47 5 HOH HOH 598 A HOH 51 5 HOH HOH 599 A HOH 55 5 HOH HOH 600 A HOH 58 5 HOH HOH 601 A HOH 59 5 HOH HOH 602 A HOH 61 5 HOH HOH 603 A HOH 63 5 HOH HOH 604 A HOH 76 5 HOH HOH 605 A HOH 78 5 HOH HOH 606 A HOH 79 5 HOH HOH 607 A HOH 83 5 HOH HOH 608 A HOH 87 5 HOH HOH 609 A HOH 91 5 HOH HOH 610 A HOH 93 5 HOH HOH 611 A HOH 98 5 HOH HOH 612 A HOH 103 5 HOH HOH 613 A HOH 111 5 HOH HOH 614 A HOH 112 5 HOH HOH 615 A HOH 127 5 HOH HOH 616 A HOH 129 5 HOH HOH 617 A HOH 140 5 HOH HOH 618 A HOH 141 5 HOH HOH 619 A HOH 143 5 HOH HOH 620 A HOH 145 5 HOH HOH 621 A HOH 146 5 HOH HOH 622 A HOH 148 5 HOH HOH 623 A SER 172 n 1 SER 172 A GLU 173 n 2 GLU 173 A LEU 174 n 3 LEU 174 A TYR 175 n 4 TYR 175 A ARG 176 n 5 ARG 176 A GLN 177 n 6 GLN 177 A SER 178 n 7 SER 178 A LEU 179 n 8 LEU 179 A GLU 180 n 9 GLU 180 A ILE 181 n 10 ILE 181 A ILE 182 n 11 ILE 182 A SER 183 n 12 SER 183 A ARG 184 n 13 ARG 184 A TYR 185 n 14 TYR 185 A LEU 186 n 15 LEU 186 A ARG 187 n 16 ARG 187 A GLU 188 n 17 GLU 188 A GLN 189 n 18 GLN 189 A ALA 190 n 19 ALA 190 A THR 191 n 20 THR 191 A GLY 192 n 21 GLY 192 A ALA 193 n 22 ALA 193 A LYS 194 n 23 LYS 194 A ASP 195 n 24 ASP 195 A THR 196 n 25 THR 196 A LYS 197 n 26 LYS 197 A PRO 198 n 27 PRO 198 A MET 199 n 28 MET 199 A GLY 200 n 29 GLY 200 A ARG 201 n 30 ARG 201 A SER 202 n 31 SER 202 A GLY 203 n 32 GLY 203 A ALA 204 n 33 ALA 204 A THR 205 n 34 THR 205 A SER 206 n 35 SER 206 A ARG 207 n 36 ARG 207 A LYS 208 n 37 LYS 208 A ALA 209 n 38 ALA 209 A LEU 210 n 39 LEU 210 A GLU 211 n 40 GLU 211 A THR 212 n 41 THR 212 A LEU 213 n 42 LEU 213 A ARG 214 n 43 ARG 214 A ARG 215 n 44 ARG 215 A VAL 216 n 45 VAL 216 A GLY 217 n 46 GLY 217 A ASP 218 n 47 ASP 218 A GLY 219 n 48 GLY 219 A VAL 220 n 49 VAL 220 A GLN 221 n 50 GLN 221 A ARG 222 n 51 ARG 222 A ASN 223 n 52 ASN 223 A HIS 224 n 53 HIS 224 A GLU 225 n 54 GLU 225 A THR 226 n 55 THR 226 A ALA 227 n 56 ALA 227 A PHE 228 n 57 PHE 228 A GLN 229 n 58 GLN 229 A GLY 230 n 59 GLY 230 A MET 231 n 60 MET 231 A LEU 232 n 61 LEU 232 A ARG 233 n 62 ARG 233 A LYS 234 n 63 LYS 234 A LEU 235 n 64 LEU 235 A ASP 236 n 65 ASP 236 A ILE 237 n 66 ILE 237 A LYS 238 n 67 LYS 238 A ASN 239 n 68 ASN 239 A GLU 240 n 69 GLU 240 A ASP 241 n 70 ASP 241 A ASP 242 n 71 ASP 242 A VAL 243 n 72 VAL 243 A LYS 244 n 73 LYS 244 A SER 245 n 74 SER 245 A LEU 246 n 75 LEU 246 A SER 247 n 76 SER 247 A ARG 248 n 77 ARG 248 A VAL 249 n 78 VAL 249 A MET 250 n 79 MET 250 A ILE 251 n 80 ILE 251 A HIS 252 n 81 HIS 252 A VAL 253 n 82 VAL 253 A PHE 254 n 83 PHE 254 A SER 255 n 84 SER 255 A ASP 256 n 85 ASP 256 A GLY 257 n 86 GLY 257 A VAL 258 n 87 VAL 258 A THR 259 n 88 THR 259 A ASN 260 n 89 ASN 260 A TRP 261 n 90 TRP 261 A GLY 262 n 91 GLY 262 A ARG 263 n 92 ARG 263 A ILE 264 n 93 ILE 264 A VAL 265 n 94 VAL 265 A THR 266 n 95 THR 266 A LEU 267 n 96 LEU 267 A ILE 268 n 97 ILE 268 A SER 269 n 98 SER 269 A PHE 270 n 99 PHE 270 A GLY 271 n 100 GLY 271 A ALA 272 n 101 ALA 272 A PHE 273 n 102 PHE 273 A VAL 274 n 103 VAL 274 A ALA 275 n 104 ALA 275 A LYS 276 n 105 LYS 276 A HIS 277 n 106 HIS 277 A LEU 278 n 107 LEU 278 A LYS 279 n 108 LYS 279 A THR 280 n 109 THR 280 A ILE 281 n 110 ILE 281 A ASN 282 n 111 ASN 282 A GLN 283 n 112 GLN 283 A GLU 284 n 113 GLU 284 A SER 285 n 114 SER 285 A CYS 286 n 115 CYS 286 A ILE 287 n 116 ILE 287 A GLU 288 n 117 GLU 288 A PRO 289 n 118 PRO 289 A LEU 290 n 119 LEU 290 A ALA 291 n 120 ALA 291 A GLU 292 n 121 GLU 292 A SER 293 n 122 SER 293 A ILE 294 n 123 ILE 294 A THR 295 n 124 THR 295 A ASP 296 n 125 ASP 296 A VAL 297 n 126 VAL 297 A LEU 298 n 127 LEU 298 A VAL 299 n 128 VAL 299 A ARG 300 n 129 ARG 300 A THR 301 n 130 THR 301 A LYS 302 n 131 LYS 302 A ARG 303 n 132 ARG 303 A ASP 304 n 133 ASP 304 A TRP 305 n 134 TRP 305 A LEU 306 n 135 LEU 306 A VAL 307 n 136 VAL 307 A LYS 308 n 137 LYS 308 A GLN 309 n 138 GLN 309 A ARG 310 n 139 ARG 310 A GLY 311 n 140 GLY 311 A TRP 312 n 141 TRP 312 A ASP 313 n 142 ASP 313 A GLY 314 n 143 GLY 314 A PHE 315 n 144 PHE 315 A VAL 316 n 145 VAL 316 A GLU 317 n 146 GLU 317 A PHE 318 n 147 PHE 318 A PHE 319 n 148 PHE 319 A HIS 320 n 149 HIS 320 A VAL 321 n 150 VAL 321 A 0.7746 -0.4200 0.1847 1.3929 -0.0980 0.5302 -0.0009 -0.0185 -0.0497 0.0844 -0.0126 0.0638 -0.0031 -0.0536 0.0134 0.0113 -0.0023 0.0041 0.0117 -0.0008 0.0065 refined -14.3290 -14.0102 12.0942 X-RAY DIFFRACTION A -10 A 9999 X-RAY DIFFRACTION 1 author_defined_assembly 1 monomeric software_defined_assembly PISA 2 dimeric software_defined_assembly PISA 2 dimeric 720 -112 7700 2240 -228 14500 1620 -83 14300 A HIS 224 A ND1 HIS 53 1_555 A ZN 401 B ZN ZN 1_555 A 865 404 E N46 865 1_555 112.8 A HIS 224 A ND1 HIS 53 1_555 A ZN 401 B ZN ZN 1_555 A POP 405 F O2 POP 1_555 107.5 A 865 404 E N46 865 1_555 A ZN 401 B ZN ZN 1_555 A POP 405 F O2 POP 1_555 118.4 A HIS 224 A ND1 HIS 53 1_555 A ZN 401 B ZN ZN 1_555 A POP 405 F O5 POP 1_555 106.5 A 865 404 E N46 865 1_555 A ZN 401 B ZN ZN 1_555 A POP 405 F O5 POP 1_555 106.8 A POP 405 F O2 POP 1_555 A ZN 401 B ZN ZN 1_555 A POP 405 F O5 POP 1_555 103.8 A HIS 252 A NE2 HIS 81 1_555 A ZN 402 C ZN ZN 1_555 A ASP 256 A OD2 ASP 85 1_555 110.0 A HIS 252 A NE2 HIS 81 1_555 A ZN 402 C ZN ZN 1_555 A POP 406 G O2 POP 1_555 107.8 A ASP 256 A OD2 ASP 85 1_555 A ZN 402 C ZN ZN 1_555 A POP 406 G O2 POP 1_555 113.3 A POP 405 F O3 POP 1_555 A ZN 403 D ZN ZN 1_555 A POP 405 F O6 POP 1_555 105.0 A POP 405 F O3 POP 1_555 A ZN 403 D ZN ZN 1_555 A POP 405 F O6 POP 2_555 116.2 A POP 405 F O6 POP 1_555 A ZN 403 D ZN ZN 1_555 A POP 405 F O6 POP 2_555 107.8 A POP 405 F O3 POP 1_555 A ZN 403 D ZN ZN 1_555 A POP 405 F O3 POP 2_555 107.2 A POP 405 F O6 POP 1_555 A ZN 403 D ZN ZN 1_555 A POP 405 F O3 POP 2_555 116.2 A POP 405 F O6 POP 2_555 A ZN 403 D ZN ZN 1_555 A POP 405 F O3 POP 2_555 105.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 2_555 -x,y,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 2_556 -x,y,-z+1 crystal symmetry operation -10.5428628567 0.0000000000 47.1660571045 1 A ZN 403 D ZN 1 A OG SER 172 A OG SER 1 1 Y 1 A CG LYS 194 A CG LYS 23 1 Y 1 A CD LYS 194 A CD LYS 23 1 Y 1 A CE LYS 194 A CE LYS 23 1 Y 1 A NZ LYS 194 A NZ LYS 23 1 Y 1 A CG LYS 197 A CG LYS 26 1 Y 1 A CD LYS 197 A CD LYS 26 1 Y 1 A CE LYS 197 A CE LYS 26 1 Y 1 A NZ LYS 197 A NZ LYS 26 1 Y 1 A CG ARG 201 A CG ARG 30 1 Y 1 A CD ARG 201 A CD ARG 30 1 Y 1 A NE ARG 201 A NE ARG 30 1 Y 1 A CZ ARG 201 A CZ ARG 30 1 Y 1 A NH1 ARG 201 A NH1 ARG 30 1 Y 1 A NH2 ARG 201 A NH2 ARG 30 1 Y 1 A OG SER 202 A OG SER 31 1 Y 1 A CG LYS 208 A CG LYS 37 1 Y 1 A CD LYS 208 A CD LYS 37 1 Y 1 A CE LYS 208 A CE LYS 37 1 Y 1 A NZ LYS 208 A NZ LYS 37 1 Y 1 A CG ARG 233 A CG ARG 62 1 Y 1 A CD ARG 233 A CD ARG 62 1 Y 1 A NE ARG 233 A NE ARG 62 1 Y 1 A CZ ARG 233 A CZ ARG 62 1 Y 1 A NH1 ARG 233 A NH1 ARG 62 1 Y 1 A NH2 ARG 233 A NH2 ARG 62 1 Y 1 A CG LYS 234 A CG LYS 63 1 Y 1 A CD LYS 234 A CD LYS 63 1 Y 1 A CE LYS 234 A CE LYS 63 1 Y 1 A NZ LYS 234 A NZ LYS 63 1 Y 1 A CG GLU 240 A CG GLU 69 1 Y 1 A CD GLU 240 A CD GLU 69 1 Y 1 A OE1 GLU 240 A OE1 GLU 69 1 Y 1 A OE2 GLU 240 A OE2 GLU 69 1 Y 1 A CG ASP 241 A CG ASP 70 1 Y 1 A OD1 ASP 241 A OD1 ASP 70 1 Y 1 A OD2 ASP 241 A OD2 ASP 70 1 Y 1 A CG LYS 244 A CG LYS 73 1 Y 1 A CD LYS 244 A CD LYS 73 1 Y 1 A CE LYS 244 A CE LYS 73 1 Y 1 A NZ LYS 244 A NZ LYS 73 1 Y 1 A CG ARG 248 A CG ARG 77 1 Y 1 A CD ARG 248 A CD ARG 77 1 Y 1 A NE ARG 248 A NE ARG 77 1 Y 1 A CZ ARG 248 A CZ ARG 77 1 Y 1 A NH1 ARG 248 A NH1 ARG 77 1 Y 1 A NH2 ARG 248 A NH2 ARG 77 1 Y 1 A CG ARG 303 A CG ARG 132 1 Y 1 A CD ARG 303 A CD ARG 132 1 Y 1 A NE ARG 303 A NE ARG 132 1 Y 1 A CZ ARG 303 A CZ ARG 132 1 Y 1 A NH1 ARG 303 A NH1 ARG 132 1 Y 1 A NH2 ARG 303 A NH2 ARG 132 1 Y 1 A CG LYS 308 A CG LYS 137 1 Y 1 A CD LYS 308 A CD LYS 137 1 Y 1 A CE LYS 308 A CE LYS 137 1 Y 1 A NZ LYS 308 A NZ LYS 137 1 Y 1 A CG GLU 317 A CG GLU 146 1 Y 1 A CD GLU 317 A CD GLU 146 1 Y 1 A OE1 GLU 317 A OE1 GLU 146 1 Y 1 A OE2 GLU 317 A OE2 GLU 146 1 Y 1 A A ZN O4 ZN POP 402 406 1.61 1 A ARG 201 -68.27 -72.18 1 A HIS 320 36.46 55.54 63.580 17.5500 5.980 0.1200 -0.0000 0.0100 -0.2800 -0.0000 0.1500 0.9600 0.9340 U VALUES : WITH TLS ADDED HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.2060 0.1690 0.1710 1.7000 47.1700 715 14164 14163 5.0000 97.3 3.8620 0.0700 RANDOM 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT 0.1230 0.1150 0.8000 0.8000 1.2000 MAXIMUM LIKELIHOOD MASK 1.7000 47.1700 123 1337 21.18 27.66 68 0 1146 150 0.006 0.019 1280 0.001 0.020 1167 1.420 1.996 1758 0.756 3.000 2666 4.100 5.000 167 33.056 23.455 55 11.731 15.000 200 19.460 15.000 10 0.058 0.200 193 0.004 0.020 1475 0.001 0.020 313 0.639 1.264 617 0.637 1.264 616 1.163 1.891 774 0.2450 0.2000 1.7400 42 887 929 20 84.9200 23.470 1.000 1.700 50.000 4WMR 14163 -3.000 0.045 0.048 0.990 1 30.400 129144 9.100 97.300 1.000 0.291 1.700 1.740 4.200 2334 185 184 0.029 1 0 84.800 data reduction XDS refinement REFMAC 5.7.0032 data extraction PDB_EXTRACT 3.15 STRUCTURE OF MCL1 BOUND TO BRD inhibitor ligand 1 AT 1.7A 1 N N 2 N N 2 N N 2 N N 3 N N 4 N N 4 N N 5 N N A SER 172 A SER 1 HELX_P A GLY 192 A GLY 21 1 AA1 21 A SER 202 A SER 31 HELX_P A HIS 224 A HIS 53 1 AA2 23 A HIS 224 A HIS 53 HELX_P A ASP 236 A ASP 65 1 AA3 13 A ASN 239 A ASN 68 HELX_P A ASP 256 A ASP 85 1 AA4 18 A ASN 260 A ASN 89 HELX_P A ILE 281 A ILE 110 1 AA5 22 A GLN 283 A GLN 112 HELX_P A SER 285 A SER 114 5 AA6 3 A CYS 286 A CYS 115 HELX_P A LYS 302 A LYS 131 1 AA7 17 A LYS 302 A LYS 131 HELX_P A GLN 309 A GLN 138 1 AA8 8 A ARG 310 A ARG 139 HELX_P A HIS 320 A HIS 149 1 AA9 11 metalc 2.055 A HIS 224 A ND1 HIS 53 1_555 A ZN 401 B ZN ZN 1_555 metalc 2.122 A HIS 252 A NE2 HIS 81 1_555 A ZN 402 C ZN ZN 1_555 metalc 2.018 A ASP 256 A OD2 ASP 85 1_555 A ZN 402 C ZN ZN 1_555 metalc 1.995 A ZN 401 B ZN ZN 1_555 A 865 404 E N46 865 1_555 metalc 1.882 A ZN 401 B ZN ZN 1_555 A POP 405 F O2 POP 1_555 metalc 1.847 A ZN 401 B ZN ZN 1_555 A POP 405 F O5 POP 1_555 metalc 2.287 A ZN 402 C ZN ZN 1_555 A POP 406 G O2 POP 1_555 metalc 1.850 A ZN 403 D ZN ZN 1_555 A POP 405 F O3 POP 1_555 metalc 2.004 A ZN 403 D ZN ZN 1_555 A POP 405 F O6 POP 1_555 metalc 2.004 A ZN 403 D ZN ZN 1_555 A POP 405 F O6 POP 2_555 metalc 1.850 A ZN 403 D ZN ZN 1_555 A POP 405 F O3 POP 2_555 Apoptosis/Inhibitor Apoptosis, protein-protein interaction, Apoptosis-Inhibitor complex MCL1_HUMAN UNP 1 173 Q07820 ELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIH VFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHV 173 321 4WMR 173 321 Q07820 A 1 2 150 1 expression tag SER 172 4WMR A Q07820 UNP 1 binding site for residue ZN A 401 A ZN 401 Software 3 binding site for residue ZN A 402 A ZN 402 Software 3 binding site for residue ZN A 403 A ZN 403 Software 2 binding site for residue 865 A 404 A 865 404 Software 18 binding site for residue POP A 405 A POP 405 Software 10 binding site for residue POP A 406 A POP 406 Software 7 A HIS 224 A HIS 53 3 1_555 A 865 404 E 865 3 1_555 A POP 405 F POP 3 1_555 A HIS 252 A HIS 81 3 1_555 A ASP 256 A ASP 85 3 1_555 A POP 406 G POP 3 1_555 A POP 405 F POP 2 1_555 A POP 405 F POP 2 2_555 A HIS 224 A HIS 53 18 1_555 A THR 226 A THR 55 18 2_555 A ALA 227 A ALA 56 18 1_555 A LEU 246 A LEU 75 18 1_555 A MET 250 A MET 79 18 1_555 A VAL 253 A VAL 82 18 1_555 A ARG 263 A ARG 92 18 1_555 A THR 266 A THR 95 18 1_555 A LEU 267 A LEU 96 18 1_555 A PHE 270 A PHE 99 18 1_555 A GLY 271 A GLY 100 18 1_555 A ZN 401 B ZN 18 1_555 A POP 405 F POP 18 2_555 A POP 405 F POP 18 1_555 A HOH 560 H HOH 18 2_555 A HOH 584 H HOH 18 1_555 A HOH 587 H HOH 18 1_555 A HOH 601 H HOH 18 1_555 A HIS 224 A HIS 53 10 1_555 A ZN 401 B ZN 10 1_555 A ZN 403 D ZN 10 2_555 A ZN 403 D ZN 10 1_555 A 865 404 E 865 10 2_555 A 865 404 E 865 10 1_555 A HOH 512 H HOH 10 1_555 A HOH 518 H HOH 10 1_555 A HOH 560 H HOH 10 1_555 A HOH 601 H HOH 10 1_555 A SER 172 A SER 1 7 2_556 A HIS 252 A HIS 81 7 1_555 A ASP 256 A ASP 85 7 1_555 A ARG 300 A ARG 129 7 2_556 A ZN 402 C ZN 7 1_555 A HOH 540 H HOH 7 1_555 A HOH 617 H HOH 7 1_555 5 C 1 2 1