0.048135
0.000000
0.000000
0.000000
0.028004
0.000000
0.000000
0.000000
0.009894
0.00000
0.00000
0.00000
Call, M.J.
Call, M.E.
Knoblich, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
90.00
20.775
35.709
101.070
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
K 1
39.098
POTASSIUM ION
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C21 H40 O4
356.540
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
1-Oleoyl-R-glycerol
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
O
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
N
N
58
R
C
N
59
N
C
N
60
N
O
N
61
N
C
N
62
N
S
N
63
N
O
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
N
N
72
N
C
N
73
N
C
N
74
N
O
N
75
N
O
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
N
N
85
S
C
N
86
N
C
N
87
N
O
N
88
S
C
N
89
N
C
N
90
N
C
N
91
N
C
N
92
N
O
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
K
N
107
N
N
N
108
S
C
N
109
N
C
N
110
N
O
N
111
N
C
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
N
N
130
S
C
N
131
N
C
N
132
N
O
N
133
N
C
N
134
N
C
N
135
N
S
N
136
N
C
N
137
N
O
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
C
N
150
N
C
N
151
N
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
C
N
158
N
C
N
159
N
C
N
160
N
C
N
161
N
C
N
162
N
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
R
C
N
170
N
O
N
171
N
O
N
172
N
O
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
N
N
215
S
C
N
216
N
C
N
217
N
O
N
218
N
C
Y
219
N
C
Y
220
N
C
Y
221
N
C
Y
222
N
C
Y
223
N
C
Y
224
N
C
N
225
N
O
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
N
N
255
S
C
N
256
N
C
N
257
N
O
N
258
N
C
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
N
N
269
S
C
N
270
N
C
N
271
N
O
N
272
R
C
N
273
N
O
N
274
N
C
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
N
N
286
S
C
N
287
N
C
N
288
N
O
N
289
N
C
Y
290
N
C
Y
291
N
C
Y
292
N
C
Y
293
N
C
Y
294
N
C
Y
295
N
C
N
296
N
O
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
N
N
310
S
C
N
311
N
C
N
312
N
O
N
313
N
C
N
314
N
C
N
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
doub
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
Z
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
Y
214
N
doub
Y
215
N
sing
Y
216
N
sing
N
217
N
sing
Y
218
N
doub
N
219
N
sing
Y
220
N
doub
N
221
N
sing
Y
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
doub
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
doub
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
Y
283
N
doub
Y
284
N
sing
Y
285
N
sing
N
286
N
sing
Y
287
N
doub
N
288
N
sing
Y
289
N
doub
N
290
N
sing
Y
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
US
Cell Rep
2211-1247
11
1184
1192
10.1016/j.celrep.2015.04.045
25981043
Transmembrane Complexes of DAP12 Crystallized in Lipid Membranes Provide Insights into Control of Oligomerization in Immunoreceptor Assembly.
2015
10.2210/pdb4wol/pdb
pdb_00004wol
100
1
CCD
2014-02-20
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
0.9537
1.0
MX2
Australian Synchrotron
0.9537
SYNCHROTRON
AUSTRALIAN SYNCHROTRON BEAMLINE MX2
3331.042
TYRO protein tyrosine kinase-binding protein
UNP residues 35-67
M21V
3
man
polymer
39.098
POTASSIUM ION
1
syn
non-polymer
356.540
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
4
syn
non-polymer
18.015
water
36
nat
water
DNAX-activation protein 12,Killer-activating receptor-associated protein,KAR-associated protein
no
no
CSTVSPGVLAGIVVGDLVLTVLIALAVYFLGRL
CSTVSPGVLAGIVVGDLVLTVLIALAVYFLGRL
A,B,C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
33
TYROBP, DAP12, KARAP
9606
Homo sapiens
562
Escherichia coli
Biological sequence
1
1.88
34.43
LIPIDIC CUBIC PHASE
12.4% w/v PEG 3350, 0.149 M potassium thiocyanate
293
diffrn_detector
diffrn_source
entity_src_gen
pdbx_struct_oper_list
software
pdbx_audit_support
pdbx_audit_support
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
repository
Initial release
Database references
Data collection
Derived calculations
Refinement description
Source and taxonomy
Author supporting evidence
Author supporting evidence
Data collection
Database references
Derived calculations
Refinement description
1
0
2015-06-03
1
1
2015-06-10
1
2
2017-08-23
1
3
2017-09-27
1
4
2020-01-01
1
5
2023-09-27
_diffrn_detector.detector
_diffrn_source.pdbx_synchrotron_site
_entity_src_gen.pdbx_alt_source_flag
_pdbx_struct_oper_list.symmetry_operation
_software.version
_pdbx_audit_support.funding_organization
_pdbx_audit_support.funding_organization
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
Australia
National Health and Medical Research Council (NHMRC, Australia)
GNT1011352
Australia
veski
VIF12
Australia
Australian Research Council (ARC)
DP110104369, FT120100145
4WO1 is tetrameric form
2L34 was solved by NMR
2L35 was solved by NMR
N
RCSB
Y
RCSB
2014-10-16
REL
REL
K
POTASSIUM ION
OLC
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
HOH
water
1AFO
PDB
experimental model
K
1
2
K
K
101
A
OLC
1
3
OLC
OLC
101
B
OLC
2
3
OLC
OLC
101
C
OLC
3
3
OLC
OLC
102
C
OLC
4
3
OLC
OLC
103
C
HOH
1
4
HOH
HOH
201
A
HOH
2
4
HOH
HOH
202
A
HOH
4
4
HOH
HOH
203
A
HOH
30
4
HOH
HOH
204
A
HOH
29
4
HOH
HOH
205
A
HOH
7
4
HOH
HOH
206
A
HOH
6
4
HOH
HOH
207
A
HOH
14
4
HOH
HOH
208
A
HOH
8
4
HOH
HOH
209
A
HOH
11
4
HOH
HOH
210
A
HOH
9
4
HOH
HOH
211
A
HOH
10
4
HOH
HOH
212
A
HOH
12
4
HOH
HOH
213
A
HOH
13
4
HOH
HOH
214
A
HOH
17
4
HOH
HOH
201
B
HOH
3
4
HOH
HOH
202
B
HOH
18
4
HOH
HOH
203
B
HOH
19
4
HOH
HOH
204
B
HOH
15
4
HOH
HOH
205
B
HOH
26
4
HOH
HOH
206
B
HOH
20
4
HOH
HOH
207
B
HOH
21
4
HOH
HOH
208
B
HOH
22
4
HOH
HOH
209
B
HOH
36
4
HOH
HOH
210
B
HOH
16
4
HOH
HOH
201
C
HOH
25
4
HOH
HOH
202
C
HOH
24
4
HOH
HOH
203
C
HOH
5
4
HOH
HOH
204
C
HOH
28
4
HOH
HOH
205
C
HOH
33
4
HOH
HOH
206
C
HOH
27
4
HOH
HOH
207
C
HOH
23
4
HOH
HOH
208
C
HOH
31
4
HOH
HOH
209
C
HOH
32
4
HOH
HOH
210
C
HOH
34
4
HOH
HOH
211
C
HOH
35
4
HOH
HOH
212
C
CYS
8
n
1
CYS
8
A
SER
9
n
2
SER
9
A
THR
10
n
3
THR
10
A
VAL
11
n
4
VAL
11
A
SER
12
n
5
SER
12
A
PRO
13
n
6
PRO
13
A
GLY
14
n
7
GLY
14
A
VAL
15
n
8
VAL
15
A
LEU
16
n
9
LEU
16
A
ALA
17
n
10
ALA
17
A
GLY
18
n
11
GLY
18
A
ILE
19
n
12
ILE
19
A
VAL
20
n
13
VAL
20
A
VAL
21
n
14
VAL
21
A
GLY
22
n
15
GLY
22
A
ASP
23
n
16
ASP
23
A
LEU
24
n
17
LEU
24
A
VAL
25
n
18
VAL
25
A
LEU
26
n
19
LEU
26
A
THR
27
n
20
THR
27
A
VAL
28
n
21
VAL
28
A
LEU
29
n
22
LEU
29
A
ILE
30
n
23
ILE
30
A
ALA
31
n
24
ALA
31
A
LEU
32
n
25
LEU
32
A
ALA
33
n
26
ALA
33
A
VAL
34
n
27
VAL
34
A
TYR
35
n
28
TYR
35
A
PHE
36
n
29
PHE
36
A
LEU
37
n
30
LEU
37
A
GLY
38
n
31
GLY
38
A
ARG
39
n
32
ARG
39
A
LEU
40
n
33
LEU
40
A
CYS
8
n
1
CYS
8
B
n
2
9
B
n
3
10
B
VAL
11
n
4
VAL
11
B
SER
12
n
5
SER
12
B
PRO
13
n
6
PRO
13
B
GLY
14
n
7
GLY
14
B
VAL
15
n
8
VAL
15
B
LEU
16
n
9
LEU
16
B
ALA
17
n
10
ALA
17
B
GLY
18
n
11
GLY
18
B
ILE
19
n
12
ILE
19
B
VAL
20
n
13
VAL
20
B
VAL
21
n
14
VAL
21
B
GLY
22
n
15
GLY
22
B
ASP
23
n
16
ASP
23
B
LEU
24
n
17
LEU
24
B
VAL
25
n
18
VAL
25
B
LEU
26
n
19
LEU
26
B
THR
27
n
20
THR
27
B
VAL
28
n
21
VAL
28
B
LEU
29
n
22
LEU
29
B
ILE
30
n
23
ILE
30
B
ALA
31
n
24
ALA
31
B
LEU
32
n
25
LEU
32
B
ALA
33
n
26
ALA
33
B
VAL
34
n
27
VAL
34
B
TYR
35
n
28
TYR
35
B
PHE
36
n
29
PHE
36
B
LEU
37
n
30
LEU
37
B
GLY
38
n
31
GLY
38
B
ARG
39
n
32
ARG
39
B
LEU
40
n
33
LEU
40
B
n
1
8
C
n
2
9
C
n
3
10
C
VAL
11
n
4
VAL
11
C
SER
12
n
5
SER
12
C
PRO
13
n
6
PRO
13
C
GLY
14
n
7
GLY
14
C
VAL
15
n
8
VAL
15
C
LEU
16
n
9
LEU
16
C
ALA
17
n
10
ALA
17
C
GLY
18
n
11
GLY
18
C
ILE
19
n
12
ILE
19
C
VAL
20
n
13
VAL
20
C
VAL
21
n
14
VAL
21
C
GLY
22
n
15
GLY
22
C
ASP
23
n
16
ASP
23
C
LEU
24
n
17
LEU
24
C
VAL
25
n
18
VAL
25
C
LEU
26
n
19
LEU
26
C
THR
27
n
20
THR
27
C
VAL
28
n
21
VAL
28
C
LEU
29
n
22
LEU
29
C
ILE
30
n
23
ILE
30
C
ALA
31
n
24
ALA
31
C
LEU
32
n
25
LEU
32
C
ALA
33
n
26
ALA
33
C
VAL
34
n
27
VAL
34
C
TYR
35
n
28
TYR
35
C
PHE
36
n
29
PHE
36
C
LEU
37
n
30
LEU
37
C
GLY
38
n
31
GLY
38
C
ARG
39
n
32
ARG
39
C
LEU
40
n
33
LEU
40
C
3.6750
1.7911
-3.7754
0.8727
-1.8145
5.9069
-0.0229
-0.5975
-0.4615
0.6136
0.0802
0.3953
0.3558
-0.1844
-0.0206
0.7887
0.0881
0.0482
0.3292
0.1679
0.3409
refined
18.8012
16.9746
74.1459
X-RAY DIFFRACTION
1.4393
0.4689
0.7566
1.7564
0.2437
2.0622
0.0103
0.0514
-0.0146
-0.0425
0.1625
0.0022
-0.1109
0.0688
-0.1313
0.1041
-0.0020
0.0118
0.1180
0.0025
0.1688
refined
15.7472
15.2826
47.8214
X-RAY DIFFRACTION
4.5094
-2.2663
-0.5302
1.1861
0.0175
1.3785
0.0097
-0.0486
0.5139
0.1868
0.0849
-0.0742
-1.4806
0.6782
-0.0981
0.8917
-0.0299
0.1164
0.5477
0.0646
0.2049
refined
9.9653
14.7514
73.4573
X-RAY DIFFRACTION
1.6745
-0.4683
-0.2720
1.4941
-0.4562
1.3710
0.0023
0.0838
-0.0506
-0.0039
0.0227
0.0806
-0.0255
0.0802
-0.0682
0.1094
-0.0114
-0.0050
0.0924
-0.0078
0.1586
refined
5.2183
13.8699
50.6473
X-RAY DIFFRACTION
6.2906
-1.7888
4.0289
2.0000
4.3900
2.0001
0.0392
0.2268
-0.0872
0.0068
0.1398
-0.3946
0.5900
0.8605
-0.1797
0.6023
-0.0076
-0.2603
0.7444
0.0009
0.2599
refined
12.2678
21.5596
71.0064
X-RAY DIFFRACTION
1.7908
0.1416
-1.7868
0.9924
0.6198
3.8438
0.1251
-0.0540
0.1857
-0.0462
0.1723
-0.0151
-0.3615
0.0516
-0.2439
0.1446
0.0140
-0.0048
0.1320
0.0180
0.1506
refined
9.5569
22.9906
49.4170
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 8 through 12 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 13 through 40 )
X-RAY DIFFRACTION
3
chain 'B' and (resid 8 through 12 )
X-RAY DIFFRACTION
4
chain 'B' and (resid 13 through 40 )
X-RAY DIFFRACTION
5
chain 'C' and (resid 11 through 12 )
X-RAY DIFFRACTION
6
chain 'C' and (resid 13 through 40 )
software_defined_assembly
PISA
3
trimeric
2970
-32
6660
A
ASP
23
A
OD1
ASP
16
1_555
A
K
101
D
K
K
1_555
A
ASP
23
A
OD2
ASP
16
1_555
45.0
A
ASP
23
A
OD1
ASP
16
1_555
A
K
101
D
K
K
1_555
A
THR
27
A
OG1
THR
20
1_555
80.3
A
ASP
23
A
OD2
ASP
16
1_555
A
K
101
D
K
K
1_555
A
THR
27
A
OG1
THR
20
1_555
85.4
A
ASP
23
A
OD1
ASP
16
1_555
A
K
101
D
K
K
1_555
B
ASP
23
B
OD1
ASP
16
1_555
94.0
A
ASP
23
A
OD2
ASP
16
1_555
A
K
101
D
K
K
1_555
B
ASP
23
B
OD1
ASP
16
1_555
65.2
A
THR
27
A
OG1
THR
20
1_555
A
K
101
D
K
K
1_555
B
ASP
23
B
OD1
ASP
16
1_555
141.5
A
ASP
23
A
OD1
ASP
16
1_555
A
K
101
D
K
K
1_555
B
THR
27
B
OG1
THR
20
1_555
144.1
A
ASP
23
A
OD2
ASP
16
1_555
A
K
101
D
K
K
1_555
B
THR
27
B
OG1
THR
20
1_555
99.3
A
THR
27
A
OG1
THR
20
1_555
A
K
101
D
K
K
1_555
B
THR
27
B
OG1
THR
20
1_555
96.6
B
ASP
23
B
OD1
ASP
16
1_555
A
K
101
D
K
K
1_555
B
THR
27
B
OG1
THR
20
1_555
66.3
A
ASP
23
A
OD1
ASP
16
1_555
A
K
101
D
K
K
1_555
C
ASP
23
C
OD2
ASP
16
1_555
66.5
A
ASP
23
A
OD2
ASP
16
1_555
A
K
101
D
K
K
1_555
C
ASP
23
C
OD2
ASP
16
1_555
94.6
A
THR
27
A
OG1
THR
20
1_555
A
K
101
D
K
K
1_555
C
ASP
23
C
OD2
ASP
16
1_555
130.6
B
ASP
23
B
OD1
ASP
16
1_555
A
K
101
D
K
K
1_555
C
ASP
23
C
OD2
ASP
16
1_555
78.6
B
THR
27
B
OG1
THR
20
1_555
A
K
101
D
K
K
1_555
C
ASP
23
C
OD2
ASP
16
1_555
131.7
A
ASP
23
A
OD1
ASP
16
1_555
A
K
101
D
K
K
1_555
C
THR
27
C
OG1
THR
20
1_555
113.1
A
ASP
23
A
OD2
ASP
16
1_555
A
K
101
D
K
K
1_555
C
THR
27
C
OG1
THR
20
1_555
158.0
A
THR
27
A
OG1
THR
20
1_555
A
K
101
D
K
K
1_555
C
THR
27
C
OG1
THR
20
1_555
92.6
B
ASP
23
B
OD1
ASP
16
1_555
A
K
101
D
K
K
1_555
C
THR
27
C
OG1
THR
20
1_555
124.1
B
THR
27
B
OG1
THR
20
1_555
A
K
101
D
K
K
1_555
C
THR
27
C
OG1
THR
20
1_555
102.7
C
ASP
23
C
OD2
ASP
16
1_555
A
K
101
D
K
K
1_555
C
THR
27
C
OG1
THR
20
1_555
70.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
B
N
CYS
8
B
N
CYS
1
1
Y
1
B
CA
CYS
8
B
CA
CYS
1
1
Y
1
B
C
CYS
8
B
C
CYS
1
1
Y
1
B
O
CYS
8
B
O
CYS
1
1
Y
1
B
CB
CYS
8
B
CB
CYS
1
1
Y
1
B
SER
9
B
SER
2
1
Y
1
B
THR
10
B
THR
3
1
Y
1
C
CYS
8
C
CYS
1
1
Y
1
C
SER
9
C
SER
2
1
Y
1
C
THR
10
C
THR
3
1
Y
0.2228
0.1833
0.1873
1.770
33.669
739
7407
9.98
94.26
0.18
1
1
FREE R-VALUE
1.33
MOLECULAR REPLACEMENT
25.06
0.90
1.11
1AFO
ML
FLAT BULK SOLVENT MODEL
1.770
33.669
36
802
101
0
665
0.007
767
0.900
1020
15.543
286
0.036
137
0.005
116
0.2922
0.2700
1.9067
144
1303
95.00
0.2809
0.2358
2.0986
132
1176
85.00
0.2808
0.2140
2.4022
139
1279
93.00
0.1948
0.1693
3.0262
159
1425
100.00
0.1947
0.1536
33.6754
165
1485
99.00
1.77
33.67
4WOL
7502
0.1357
1
22.26
13.0
95.47
refinement
PHENIX
1.9_1692
Crystal Structure of the DAP12 transmembrane domain in lipidic cubic phase
1
N
N
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
A
SER
12
A
SER
5
HELX_P
A
ARG
39
A
ARG
32
1
AA1
28
B
SER
12
B
SER
5
HELX_P
B
GLY
38
B
GLY
31
1
AA2
27
C
SER
12
C
SER
5
HELX_P
C
ARG
39
C
ARG
32
1
AA3
28
disulf
2.032
A
CYS
8
A
SG
CYS
1
1_555
B
CYS
8
B
SG
CYS
1
1_555
metalc
2.860
A
ASP
23
A
OD1
ASP
16
1_555
A
K
101
D
K
K
1_555
metalc
2.827
A
ASP
23
A
OD2
ASP
16
1_555
A
K
101
D
K
K
1_555
metalc
2.883
A
THR
27
A
OG1
THR
20
1_555
A
K
101
D
K
K
1_555
metalc
3.021
A
K
101
D
K
K
1_555
B
ASP
23
B
OD1
ASP
16
1_555
metalc
2.748
A
K
101
D
K
K
1_555
B
THR
27
B
OG1
THR
20
1_555
metalc
2.689
A
K
101
D
K
K
1_555
C
ASP
23
C
OD2
ASP
16
1_555
metalc
2.832
A
K
101
D
K
K
1_555
C
THR
27
C
OG1
THR
20
1_555
SIGNALING PROTEIN
alpha-helix transmembrane signalling, SIGNALING PROTEIN
TYOBP_HUMAN
UNP
1
35
O43914
CSTVSPGVLAGIVMGDLVLTVLIALAVYFLGRL
35
67
4WOL
8
40
O43914
A
1
1
33
35
67
4WOL
8
40
O43914
B
1
1
33
35
67
4WOL
8
40
O43914
C
1
1
33
1
MET
engineered mutation
VAL
21
4WOL
A
O43914
UNP
48
14
2
MET
engineered mutation
VAL
21
4WOL
B
O43914
UNP
48
14
3
MET
engineered mutation
VAL
21
4WOL
C
O43914
UNP
48
14
binding site for residue K A 101
A
K
101
Software
6
binding site for residue OLC B 101
B
OLC
101
Software
12
binding site for residue OLC C 101
C
OLC
101
Software
11
binding site for residue OLC C 102
C
OLC
102
Software
10
binding site for residue OLC C 103
C
OLC
103
Software
11
A
ASP
23
A
ASP
16
6
1_555
A
THR
27
A
THR
20
6
1_555
B
ASP
23
B
ASP
16
6
1_555
B
THR
27
B
THR
20
6
1_555
C
ASP
23
C
ASP
16
6
1_555
C
THR
27
C
THR
20
6
1_555
A
GLY
22
A
GLY
15
12
1_555
A
ASP
23
A
ASP
16
12
1_555
A
VAL
34
A
VAL
27
12
4_556
A
GLY
38
A
GLY
31
12
4_556
B
PRO
13
B
PRO
6
12
1_555
B
LEU
16
B
LEU
9
12
1_555
B
ALA
17
B
ALA
10
12
1_555
B
ASP
23
B
ASP
16
12
1_555
B
LEU
29
B
LEU
22
12
1_655
B
ARG
39
B
ARG
32
12
4_556
C
OLC
101
F
OLC
12
1_555
C
HOH
201
K
HOH
12
1_555
A
VAL
11
A
VAL
4
11
1_555
A
LEU
16
A
LEU
9
11
1_555
A
GLY
18
A
GLY
11
11
1_455
A
LEU
37
A
LEU
30
11
4_556
B
ILE
19
B
ILE
12
11
1_555
B
ASP
23
B
ASP
16
11
1_555
B
LEU
26
B
LEU
19
11
1_555
B
OLC
101
E
OLC
11
1_555
C
ASP
23
C
ASP
16
11
1_555
C
HOH
201
K
HOH
11
1_555
C
HOH
204
K
HOH
11
1_555
A
VAL
20
A
VAL
13
10
4_466
A
VAL
25
A
VAL
18
10
4_466
B
ALA
33
B
ALA
26
10
4_566
C
VAL
25
C
VAL
18
10
4_566
C
VAL
28
C
VAL
21
10
4_566
C
LEU
29
C
LEU
22
10
1_555
C
PHE
36
C
PHE
29
10
1_555
C
ARG
39
C
ARG
32
10
1_555
C
OLC
103
H
OLC
10
4_466
C
HOH
211
K
HOH
10
1_555
B
LEU
37
B
LEU
30
11
4_566
B
GLY
38
B
GLY
31
11
4_566
B
HOH
201
J
HOH
11
4_566
C
GLY
14
C
GLY
7
11
1_555
C
VAL
15
C
VAL
8
11
1_555
C
GLY
18
C
GLY
11
11
1_555
C
GLY
22
C
GLY
15
11
1_555
C
LEU
26
C
LEU
19
11
1_555
C
OLC
102
G
OLC
11
4_566
C
HOH
202
K
HOH
11
1_555
C
HOH
205
K
HOH
11
1_555
19
P 21 21 21