0.010223 0.005902 0.000000 -0.000000 0.011805 0.000000 0.000000 -0.000000 0.012409 0.00000 0.00000 0.00000 Mohr, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 97.815 97.815 80.585 C24 H21 F2 N5 O 433.453 3-{6-[(4R)-6-azaspiro[2.5]oct-4-yloxy]pyrazin-2-yl}-5-(2,6-difluorophenyl)-1H-indazole non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N F Y 2 N C Y 3 N C Y 4 N C Y 5 N C Y 6 N C N 7 N F Y 8 N C Y 9 N C Y 10 N C Y 11 N C Y 12 N C Y 13 N N Y 14 N N Y 15 N C Y 16 N C Y 17 N C Y 18 N N Y 19 N C Y 20 N C N 21 N O N 22 R C N 23 N C N 24 N N N 25 N C N 26 N C N 27 N C N 28 N C N 29 N C Y 30 N N Y 31 N C Y 32 N C N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N N N 55 S C N 56 N C N 57 N O N 58 N C N 59 N O N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N N N 68 S C N 69 N C N 70 N O N 71 N C N 72 N C N 73 N C N 74 N N N 75 N C N 76 N N N 77 N N N 78 N O N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N O N 101 N N N 102 N O N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N N N 112 S C N 113 N C N 114 N O N 115 N C N 116 N C N 117 N O N 118 N O N 119 N O N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 R C N 129 N C N 130 N O N 131 N C N 132 N S N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N N N 142 S C N 143 N C N 144 N O N 145 N C N 146 N C N 147 N C N 148 N O N 149 N N N 150 N O N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 N C N 166 N C N 167 N C N 168 N O N 169 N O N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N N N 181 N C N 182 N C N 183 N O N 184 N O N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N C N 191 N O N 192 N C N 193 N O N 194 N C N 195 N O N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N N N 205 S C N 206 N C N 207 N O N 208 N C Y 209 N C Y 210 N N Y 211 N C Y 212 N C Y 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N O N 226 N H N 227 N H N 228 N N N 229 S C N 230 N C N 231 N O N 232 S C N 233 N C N 234 N C N 235 N C N 236 N O N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C N 255 N C N 256 N C N 257 N C N 258 N O N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N N N 273 S C N 274 N C N 275 N O N 276 N C N 277 N C N 278 N C N 279 N C N 280 N N N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N N N 298 S C N 299 N C N 300 N O N 301 N C N 302 N C N 303 N S N 304 N C N 305 N O N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N N N 318 S C N 319 N C N 320 N O N 321 N C Y 322 N C Y 323 N C Y 324 N C Y 325 N C Y 326 N C Y 327 N C N 328 N O N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N N N 341 S C N 342 N C N 343 N O N 344 N C N 345 N C N 346 N C N 347 N O N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N N N 358 S C N 359 N C N 360 N O N 361 N C N 362 N O N 363 N O N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N N N 372 S C N 373 N C N 374 N O N 375 R C N 376 N O N 377 N C N 378 N O N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N N N 389 S C N 390 N C N 391 N O N 392 N C Y 393 N C Y 394 N C Y 395 N C Y 396 N N Y 397 N C Y 398 N C Y 399 N C Y 400 N C Y 401 N C N 402 N O N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N N N 416 S C N 417 N C N 418 N O N 419 N C Y 420 N C Y 421 N C Y 422 N C Y 423 N C Y 424 N C Y 425 N C N 426 N O N 427 N O N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N N N 440 S C N 441 N C N 442 N O N 443 N C N 444 N C N 445 N C N 446 N O N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H Y 1 N sing Y 2 N sing Y 3 N doub Y 4 N doub Y 5 N sing Y 6 N sing Y 7 N doub Y 8 N sing Y 9 N sing N 10 N sing Y 11 N sing Y 12 N doub Y 13 N doub Y 14 N doub Y 15 N doub Y 16 N sing Y 17 N sing N 18 N sing N 19 N sing N 20 N sing Y 21 N doub Y 22 N sing Y 23 N sing N 24 N sing N 25 N sing Y 26 N doub N 27 N sing N 28 N sing Y 29 N doub N 30 N sing Y 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N doub N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N doub N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N doub N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N doub N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N doub N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N doub N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N doub N 207 N sing N 208 N sing N 209 N sing N 210 N sing Y 211 N sing Y 212 N doub Y 213 N doub N 214 N sing Y 215 N sing N 216 N sing Y 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N doub N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N doub N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N doub N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N doub N 315 N sing N 316 N sing N 317 N sing N 318 N sing Y 319 N doub Y 320 N sing Y 321 N sing N 322 N sing Y 323 N doub N 324 N sing Y 325 N doub N 326 N sing Y 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N doub N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N doub N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N doub N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N doub N 384 N sing N 385 N sing N 386 N sing N 387 N sing Y 388 N doub Y 389 N sing Y 390 N sing N 391 N sing Y 392 N doub Y 393 N sing Y 394 N sing N 395 N sing Y 396 N sing Y 397 N doub N 398 N sing Y 399 N doub N 400 N sing Y 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N doub N 412 N sing N 413 N sing N 414 N sing N 415 N sing Y 416 N doub Y 417 N sing Y 418 N sing N 419 N sing Y 420 N doub N 421 N sing Y 422 N doub N 423 N sing Y 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N doub N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing UK Bioorg.Med.Chem.Lett. BMCLE8 1127 1464-3405 25 834 840 10.1016/j.bmcl.2014.12.068 25597005 The discovery of novel 3-(pyrazin-2-yl)-1H-indazoles as potent pan-Pim kinase inhibitors. 2015 10.2210/pdb4wrs/pdb pdb_00004wrs 100 1 CCD 2014-01-24 RIGAKU SATURN 944 VariMax HF SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU FR-E SUPERBRIGHT 33064.422 Serine/threonine-protein kinase pim-1 2.7.11.1 unp residues 124-396 1 man polymer 92.094 GLYCEROL 2 syn non-polymer 433.453 3-{6-[(4R)-6-azaspiro[2.5]oct-4-yloxy]pyrazin-2-yl}-5-(2,6-difluorophenyl)-1H-indazole 1 syn non-polymer 18.015 water 142 nat water no no MAHHHHHHDEVDGPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH MAHHHHHHDEVDGPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 286 PIM1 9606 Homo sapiens 562 Escherichia coli Biological sequence 3.37 63.46 VAPOR DIFFUSION, HANGING DROP 8.0 1.0M LiCl, 0.1M TRIS, 20% PEG6K 277 chem_comp_atom chem_comp_bond citation database_2 entity_src_gen pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list struct_keywords repository Initial release Database references Data collection Database references Derived calculations Other Source and taxonomy Structure summary 1 0 2015-02-04 1 1 2015-02-11 1 2 2023-12-27 _citation.journal_id_CSD _database_2.pdbx_DOI _database_2.pdbx_database_accession _entity_src_gen.pdbx_alt_source_flag _pdbx_database_status.pdb_format_compatible _pdbx_struct_assembly.oligomeric_details _pdbx_struct_oper_list.symmetry_operation _struct_keywords.text N RCSB Y RCSB 2014-10-25 REL REL GOL GLYCEROL 3U1 3-{6-[(4R)-6-azaspiro[2.5]oct-4-yloxy]pyrazin-2-yl}-5-(2,6-difluorophenyl)-1H-indazole HOH water GOL 1 2 GOL GOL 401 A GOL 2 2 GOL GOL 402 A UNL 1 3 3U1 3U1 403 A HOH 51 4 HOH HOH 501 A HOH 28 4 HOH HOH 502 A HOH 72 4 HOH HOH 503 A HOH 134 4 HOH HOH 504 A HOH 16 4 HOH HOH 505 A HOH 113 4 HOH HOH 506 A HOH 91 4 HOH HOH 507 A HOH 47 4 HOH HOH 508 A HOH 117 4 HOH HOH 509 A HOH 74 4 HOH HOH 510 A HOH 92 4 HOH HOH 511 A HOH 73 4 HOH HOH 512 A HOH 69 4 HOH HOH 513 A HOH 89 4 HOH HOH 514 A HOH 70 4 HOH HOH 515 A HOH 26 4 HOH HOH 516 A HOH 21 4 HOH HOH 517 A HOH 65 4 HOH HOH 518 A HOH 83 4 HOH HOH 519 A HOH 37 4 HOH HOH 520 A HOH 42 4 HOH HOH 521 A HOH 49 4 HOH HOH 522 A HOH 45 4 HOH HOH 523 A HOH 66 4 HOH HOH 524 A HOH 115 4 HOH HOH 525 A HOH 27 4 HOH HOH 526 A HOH 18 4 HOH HOH 527 A HOH 125 4 HOH HOH 528 A HOH 116 4 HOH HOH 529 A HOH 48 4 HOH HOH 530 A HOH 1 4 HOH HOH 531 A HOH 80 4 HOH HOH 532 A HOH 104 4 HOH HOH 533 A HOH 114 4 HOH HOH 534 A HOH 44 4 HOH HOH 535 A HOH 23 4 HOH HOH 536 A HOH 124 4 HOH HOH 537 A HOH 133 4 HOH HOH 538 A HOH 12 4 HOH HOH 539 A HOH 142 4 HOH HOH 540 A HOH 86 4 HOH HOH 541 A HOH 97 4 HOH HOH 542 A HOH 140 4 HOH HOH 543 A HOH 77 4 HOH HOH 544 A HOH 126 4 HOH HOH 545 A HOH 79 4 HOH HOH 546 A HOH 2 4 HOH HOH 547 A HOH 3 4 HOH HOH 548 A HOH 4 4 HOH HOH 549 A HOH 5 4 HOH HOH 550 A HOH 6 4 HOH HOH 551 A HOH 7 4 HOH HOH 552 A HOH 8 4 HOH HOH 553 A HOH 9 4 HOH HOH 554 A HOH 10 4 HOH HOH 555 A HOH 11 4 HOH HOH 556 A HOH 13 4 HOH HOH 557 A HOH 14 4 HOH HOH 558 A HOH 15 4 HOH HOH 559 A HOH 17 4 HOH HOH 560 A HOH 19 4 HOH HOH 561 A HOH 20 4 HOH HOH 562 A HOH 22 4 HOH HOH 563 A HOH 24 4 HOH HOH 564 A HOH 25 4 HOH HOH 565 A HOH 29 4 HOH HOH 566 A HOH 30 4 HOH HOH 567 A HOH 31 4 HOH HOH 568 A HOH 32 4 HOH HOH 569 A HOH 33 4 HOH HOH 570 A HOH 34 4 HOH HOH 571 A HOH 35 4 HOH HOH 572 A HOH 36 4 HOH HOH 573 A HOH 38 4 HOH HOH 574 A HOH 39 4 HOH HOH 575 A HOH 40 4 HOH HOH 576 A HOH 41 4 HOH HOH 577 A HOH 43 4 HOH HOH 578 A HOH 46 4 HOH HOH 579 A HOH 50 4 HOH HOH 580 A HOH 52 4 HOH HOH 581 A HOH 53 4 HOH HOH 582 A HOH 54 4 HOH HOH 583 A HOH 55 4 HOH HOH 584 A HOH 56 4 HOH HOH 585 A HOH 57 4 HOH HOH 586 A HOH 58 4 HOH HOH 587 A HOH 59 4 HOH HOH 588 A HOH 60 4 HOH HOH 589 A HOH 61 4 HOH HOH 590 A HOH 62 4 HOH HOH 591 A HOH 63 4 HOH HOH 592 A HOH 64 4 HOH HOH 593 A HOH 67 4 HOH HOH 594 A HOH 68 4 HOH HOH 595 A HOH 71 4 HOH HOH 596 A HOH 75 4 HOH HOH 597 A HOH 76 4 HOH HOH 598 A HOH 78 4 HOH HOH 599 A HOH 81 4 HOH HOH 600 A HOH 82 4 HOH HOH 601 A HOH 84 4 HOH HOH 602 A HOH 85 4 HOH HOH 603 A HOH 87 4 HOH HOH 604 A HOH 88 4 HOH HOH 605 A HOH 90 4 HOH HOH 606 A HOH 93 4 HOH HOH 607 A HOH 94 4 HOH HOH 608 A HOH 95 4 HOH HOH 609 A HOH 96 4 HOH HOH 610 A HOH 98 4 HOH HOH 611 A HOH 99 4 HOH HOH 612 A HOH 100 4 HOH HOH 613 A HOH 101 4 HOH HOH 614 A HOH 102 4 HOH HOH 615 A HOH 103 4 HOH HOH 616 A HOH 105 4 HOH HOH 617 A HOH 106 4 HOH HOH 618 A HOH 107 4 HOH HOH 619 A HOH 108 4 HOH HOH 620 A HOH 109 4 HOH HOH 621 A HOH 110 4 HOH HOH 622 A HOH 111 4 HOH HOH 623 A HOH 112 4 HOH HOH 624 A HOH 118 4 HOH HOH 625 A HOH 119 4 HOH HOH 626 A HOH 120 4 HOH HOH 627 A HOH 121 4 HOH HOH 628 A HOH 122 4 HOH HOH 629 A HOH 123 4 HOH HOH 630 A HOH 127 4 HOH HOH 631 A HOH 128 4 HOH HOH 632 A HOH 129 4 HOH HOH 633 A HOH 130 4 HOH HOH 634 A HOH 131 4 HOH HOH 635 A HOH 132 4 HOH HOH 636 A HOH 135 4 HOH HOH 637 A HOH 136 4 HOH HOH 638 A HOH 137 4 HOH HOH 639 A HOH 138 4 HOH HOH 640 A HOH 139 4 HOH HOH 641 A HOH 141 4 HOH HOH 642 A n 1 20 A n 2 21 A n 3 22 A n 4 23 A n 5 24 A n 6 25 A n 7 26 A n 8 27 A n 9 28 A n 10 29 A n 11 30 A n 12 31 A n 13 32 A PRO 33 n 14 PRO 33 A LEU 34 n 15 LEU 34 A GLU 35 n 16 GLU 35 A SER 36 n 17 SER 36 A GLN 37 n 18 GLN 37 A TYR 38 n 19 TYR 38 A GLN 39 n 20 GLN 39 A VAL 40 n 21 VAL 40 A GLY 41 n 22 GLY 41 A PRO 42 n 23 PRO 42 A LEU 43 n 24 LEU 43 A LEU 44 n 25 LEU 44 A GLY 45 n 26 GLY 45 A SER 46 n 27 SER 46 A GLY 47 n 28 GLY 47 A GLY 48 n 29 GLY 48 A PHE 49 n 30 PHE 49 A GLY 50 n 31 GLY 50 A SER 51 n 32 SER 51 A VAL 52 n 33 VAL 52 A TYR 53 n 34 TYR 53 A SER 54 n 35 SER 54 A GLY 55 n 36 GLY 55 A ILE 56 n 37 ILE 56 A ARG 57 n 38 ARG 57 A VAL 58 n 39 VAL 58 A SER 59 n 40 SER 59 A ASP 60 n 41 ASP 60 A ASN 61 n 42 ASN 61 A LEU 62 n 43 LEU 62 A PRO 63 n 44 PRO 63 A VAL 64 n 45 VAL 64 A ALA 65 n 46 ALA 65 A ILE 66 n 47 ILE 66 A LYS 67 n 48 LYS 67 A HIS 68 n 49 HIS 68 A VAL 69 n 50 VAL 69 A GLU 70 n 51 GLU 70 A LYS 71 n 52 LYS 71 A ASP 72 n 53 ASP 72 A ARG 73 n 54 ARG 73 A ILE 74 n 55 ILE 74 A SER 75 n 56 SER 75 A ASP 76 n 57 ASP 76 A TRP 77 n 58 TRP 77 A GLY 78 n 59 GLY 78 A GLU 79 n 60 GLU 79 A LEU 80 n 61 LEU 80 A PRO 81 n 62 PRO 81 A ASN 82 n 63 ASN 82 A GLY 83 n 64 GLY 83 A THR 84 n 65 THR 84 A ARG 85 n 66 ARG 85 A VAL 86 n 67 VAL 86 A PRO 87 n 68 PRO 87 A MET 88 n 69 MET 88 A GLU 89 n 70 GLU 89 A VAL 90 n 71 VAL 90 A VAL 91 n 72 VAL 91 A LEU 92 n 73 LEU 92 A LEU 93 n 74 LEU 93 A LYS 94 n 75 LYS 94 A LYS 95 n 76 LYS 95 A VAL 96 n 77 VAL 96 A SER 97 n 78 SER 97 A SER 98 n 79 SER 98 A GLY 99 n 80 GLY 99 A PHE 100 n 81 PHE 100 A SER 101 n 82 SER 101 A GLY 102 n 83 GLY 102 A VAL 103 n 84 VAL 103 A ILE 104 n 85 ILE 104 A ARG 105 n 86 ARG 105 A LEU 106 n 87 LEU 106 A LEU 107 n 88 LEU 107 A ASP 108 n 89 ASP 108 A TRP 109 n 90 TRP 109 A PHE 110 n 91 PHE 110 A GLU 111 n 92 GLU 111 A ARG 112 n 93 ARG 112 A PRO 113 n 94 PRO 113 A ASP 114 n 95 ASP 114 A SER 115 n 96 SER 115 A PHE 116 n 97 PHE 116 A VAL 117 n 98 VAL 117 A LEU 118 n 99 LEU 118 A ILE 119 n 100 ILE 119 A LEU 120 n 101 LEU 120 A GLU 121 n 102 GLU 121 A ARG 122 n 103 ARG 122 A PRO 123 n 104 PRO 123 A GLU 124 n 105 GLU 124 A PRO 125 n 106 PRO 125 A VAL 126 n 107 VAL 126 A GLN 127 n 108 GLN 127 A ASP 128 n 109 ASP 128 A LEU 129 n 110 LEU 129 A PHE 130 n 111 PHE 130 A ASP 131 n 112 ASP 131 A PHE 132 n 113 PHE 132 A ILE 133 n 114 ILE 133 A THR 134 n 115 THR 134 A GLU 135 n 116 GLU 135 A ARG 136 n 117 ARG 136 A GLY 137 n 118 GLY 137 A ALA 138 n 119 ALA 138 A LEU 139 n 120 LEU 139 A GLN 140 n 121 GLN 140 A GLU 141 n 122 GLU 141 A GLU 142 n 123 GLU 142 A LEU 143 n 124 LEU 143 A ALA 144 n 125 ALA 144 A ARG 145 n 126 ARG 145 A SER 146 n 127 SER 146 A PHE 147 n 128 PHE 147 A PHE 148 n 129 PHE 148 A TRP 149 n 130 TRP 149 A GLN 150 n 131 GLN 150 A VAL 151 n 132 VAL 151 A LEU 152 n 133 LEU 152 A GLU 153 n 134 GLU 153 A ALA 154 n 135 ALA 154 A VAL 155 n 136 VAL 155 A ARG 156 n 137 ARG 156 A HIS 157 n 138 HIS 157 A CYS 158 n 139 CYS 158 A HIS 159 n 140 HIS 159 A ASN 160 n 141 ASN 160 A CYS 161 n 142 CYS 161 A GLY 162 n 143 GLY 162 A VAL 163 n 144 VAL 163 A LEU 164 n 145 LEU 164 A HIS 165 n 146 HIS 165 A ARG 166 n 147 ARG 166 A ASP 167 n 148 ASP 167 A ILE 168 n 149 ILE 168 A LYS 169 n 150 LYS 169 A ASP 170 n 151 ASP 170 A GLU 171 n 152 GLU 171 A ASN 172 n 153 ASN 172 A ILE 173 n 154 ILE 173 A LEU 174 n 155 LEU 174 A ILE 175 n 156 ILE 175 A ASP 176 n 157 ASP 176 A LEU 177 n 158 LEU 177 A ASN 178 n 159 ASN 178 A ARG 179 n 160 ARG 179 A GLY 180 n 161 GLY 180 A GLU 181 n 162 GLU 181 A LEU 182 n 163 LEU 182 A LYS 183 n 164 LYS 183 A LEU 184 n 165 LEU 184 A ILE 185 n 166 ILE 185 A ASP 186 n 167 ASP 186 A PHE 187 n 168 PHE 187 A GLY 188 n 169 GLY 188 A SER 189 n 170 SER 189 A GLY 190 n 171 GLY 190 A ALA 191 n 172 ALA 191 A LEU 192 n 173 LEU 192 A LEU 193 n 174 LEU 193 A LYS 194 n 175 LYS 194 A ASP 195 n 176 ASP 195 A THR 196 n 177 THR 196 A VAL 197 n 178 VAL 197 A TYR 198 n 179 TYR 198 A THR 199 n 180 THR 199 A ASP 200 n 181 ASP 200 A PHE 201 n 182 PHE 201 A ASP 202 n 183 ASP 202 A GLY 203 n 184 GLY 203 A THR 204 n 185 THR 204 A ARG 205 n 186 ARG 205 A VAL 206 n 187 VAL 206 A TYR 207 n 188 TYR 207 A SER 208 n 189 SER 208 A PRO 209 n 190 PRO 209 A PRO 210 n 191 PRO 210 A GLU 211 n 192 GLU 211 A TRP 212 n 193 TRP 212 A ILE 213 n 194 ILE 213 A ARG 214 n 195 ARG 214 A TYR 215 n 196 TYR 215 A HIS 216 n 197 HIS 216 A ARG 217 n 198 ARG 217 A TYR 218 n 199 TYR 218 A HIS 219 n 200 HIS 219 A GLY 220 n 201 GLY 220 A ARG 221 n 202 ARG 221 A SER 222 n 203 SER 222 A ALA 223 n 204 ALA 223 A ALA 224 n 205 ALA 224 A VAL 225 n 206 VAL 225 A TRP 226 n 207 TRP 226 A SER 227 n 208 SER 227 A LEU 228 n 209 LEU 228 A GLY 229 n 210 GLY 229 A ILE 230 n 211 ILE 230 A LEU 231 n 212 LEU 231 A LEU 232 n 213 LEU 232 A TYR 233 n 214 TYR 233 A ASP 234 n 215 ASP 234 A MET 235 n 216 MET 235 A VAL 236 n 217 VAL 236 A CYS 237 n 218 CYS 237 A GLY 238 n 219 GLY 238 A ASP 239 n 220 ASP 239 A ILE 240 n 221 ILE 240 A PRO 241 n 222 PRO 241 A PHE 242 n 223 PHE 242 A GLU 243 n 224 GLU 243 A HIS 244 n 225 HIS 244 A ASP 245 n 226 ASP 245 A GLU 246 n 227 GLU 246 A GLU 247 n 228 GLU 247 A ILE 248 n 229 ILE 248 A ILE 249 n 230 ILE 249 A ARG 250 n 231 ARG 250 A GLY 251 n 232 GLY 251 A GLN 252 n 233 GLN 252 A VAL 253 n 234 VAL 253 A PHE 254 n 235 PHE 254 A PHE 255 n 236 PHE 255 A ARG 256 n 237 ARG 256 A GLN 257 n 238 GLN 257 A ARG 258 n 239 ARG 258 A VAL 259 n 240 VAL 259 A SER 260 n 241 SER 260 A SER 261 n 242 SER 261 A GLU 262 n 243 GLU 262 A CYS 263 n 244 CYS 263 A GLN 264 n 245 GLN 264 A HIS 265 n 246 HIS 265 A LEU 266 n 247 LEU 266 A ILE 267 n 248 ILE 267 A ARG 268 n 249 ARG 268 A TRP 269 n 250 TRP 269 A CYS 270 n 251 CYS 270 A LEU 271 n 252 LEU 271 A ALA 272 n 253 ALA 272 A LEU 273 n 254 LEU 273 A ARG 274 n 255 ARG 274 A PRO 275 n 256 PRO 275 A SER 276 n 257 SER 276 A ASP 277 n 258 ASP 277 A ARG 278 n 259 ARG 278 A PRO 279 n 260 PRO 279 A THR 280 n 261 THR 280 A PHE 281 n 262 PHE 281 A GLU 282 n 263 GLU 282 A GLU 283 n 264 GLU 283 A ILE 284 n 265 ILE 284 A GLN 285 n 266 GLN 285 A ASN 286 n 267 ASN 286 A HIS 287 n 268 HIS 287 A PRO 288 n 269 PRO 288 A TRP 289 n 270 TRP 289 A MET 290 n 271 MET 290 A GLN 291 n 272 GLN 291 A ASP 292 n 273 ASP 292 A VAL 293 n 274 VAL 293 A LEU 294 n 275 LEU 294 A LEU 295 n 276 LEU 295 A PRO 296 n 277 PRO 296 A GLN 297 n 278 GLN 297 A GLU 298 n 279 GLU 298 A THR 299 n 280 THR 299 A ALA 300 n 281 ALA 300 A GLU 301 n 282 GLU 301 A ILE 302 n 283 ILE 302 A HIS 303 n 284 HIS 303 A LEU 304 n 285 LEU 304 A HIS 305 n 286 HIS 305 A author_and_software_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N PRO 42 A N PRO 23 A O SER 54 A O SER 35 A N SER 51 A N SER 32 A O HIS 68 A O HIS 49 A N ALA 65 A N ALA 46 A O LEU 120 A O LEU 101 A O ILE 119 A O ILE 100 A N ASP 108 A N ASP 89 A N GLY 78 A N GLY 59 A O VAL 86 A O VAL 67 A N GLN 127 A N GLN 108 A O ILE 175 A O ILE 156 A N ASP 176 A N ASP 157 A O GLU 181 A O GLU 162 A N LEU 164 A N LEU 145 A O ALA 191 A O ALA 172 1 A MET 20 A MET 1 1 Y 1 A ALA 21 A ALA 2 1 Y 1 A HIS 22 A HIS 3 1 Y 1 A HIS 23 A HIS 4 1 Y 1 A HIS 24 A HIS 5 1 Y 1 A HIS 25 A HIS 6 1 Y 1 A HIS 26 A HIS 7 1 Y 1 A HIS 27 A HIS 8 1 Y 1 A ASP 28 A ASP 9 1 Y 1 A GLU 29 A GLU 10 1 Y 1 A VAL 30 A VAL 11 1 Y 1 A ASP 31 A ASP 12 1 Y 1 A GLY 32 A GLY 13 1 Y 1 A ASP 167 -151.86 43.22 1 A ASP 186 62.17 84.39 44.684 -1.81 -0.91 0.00 -1.81 0.00 5.88 0.964 0.947 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.20781 0.17891 0.18040 2.20 29.75 1123 20815 5.1 98.37 4.215 0.107 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.187 0.159 0.80 0.80 1.20 MAXIMUM LIKELIHOOD WITH PHASES MASK 2.20 29.75 142 2411 44 0 2225 0.007 0.019 2332 0.001 0.020 2179 1.101 1.970 3167 0.718 3.000 5003 5.261 5.000 272 35.050 23.136 118 12.534 15.000 380 14.531 15.000 21 0.068 0.200 334 0.004 0.021 2611 0.001 0.020 569 1.807 4.331 1091 1.807 4.329 1090 2.902 6.487 1362 2.902 6.489 1363 1.900 4.599 1241 1.899 4.599 1242 3.200 6.808 1803 5.377 34.827 2706 5.363 34.682 2665 0.265 0.228 2.258 79 1514 20 97.07 2.20 30.0 4WRS 22333 0.083 1 11.2 11.4 98.4 0.561 2.20 2.28 4.95 1 11.3 97.0 refinement REFMAC 5.8.0049 Crystal structure of human Pim-1 kinase in complex with an azaspiro pyrazinyl-indazole inhibitor. 1 N N 2 N N 2 N N 3 N N 4 N N A ASP 72 A ASP 53 HELX_P A ILE 74 A ILE 55 5 AA1 3 A MET 88 A MET 69 HELX_P A SER 97 A SER 78 1 AA2 10 A LEU 129 A LEU 110 HELX_P A GLY 137 A GLY 118 1 AA3 9 A GLN 140 A GLN 121 HELX_P A CYS 161 A CYS 142 1 AA4 22 A LYS 169 A LYS 150 HELX_P A GLU 171 A GLU 152 5 AA5 3 A THR 204 A THR 185 HELX_P A SER 208 A SER 189 5 AA6 5 A PRO 209 A PRO 190 HELX_P A HIS 216 A HIS 197 1 AA7 8 A HIS 219 A HIS 200 HELX_P A GLY 238 A GLY 219 1 AA8 20 A HIS 244 A HIS 225 HELX_P A GLY 251 A GLY 232 1 AA9 8 A SER 260 A SER 241 HELX_P A LEU 271 A LEU 252 1 AB1 12 A ARG 274 A ARG 255 HELX_P A ARG 278 A ARG 259 5 AB2 5 A THR 280 A THR 261 HELX_P A ASN 286 A ASN 267 1 AB3 7 A HIS 287 A HIS 268 HELX_P A GLN 291 A GLN 272 5 AB4 5 A LEU 295 A LEU 276 HELX_P A LEU 304 A LEU 285 1 AB5 10 transferase/transferase inhibitor TRANSFERASE, serine/threonine protein kinase, transferase-transferase inhibitor complex A GLU 124 A GLU 105 1 A PRO 125 A PRO 106 0.37 PIM1_HUMAN UNP 1 124 P11309 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA LRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLH 124 396 4WRS 33 305 P11309 A 1 14 286 1 initiating methionine MET 20 4WRS A P11309 UNP 1 1 expression tag ALA 21 4WRS A P11309 UNP 2 1 expression tag HIS 22 4WRS A P11309 UNP 3 1 expression tag HIS 23 4WRS A P11309 UNP 4 1 expression tag HIS 24 4WRS A P11309 UNP 5 1 expression tag HIS 25 4WRS A P11309 UNP 6 1 expression tag HIS 26 4WRS A P11309 UNP 7 1 expression tag HIS 27 4WRS A P11309 UNP 8 1 expression tag ASP 28 4WRS A P11309 UNP 9 1 expression tag GLU 29 4WRS A P11309 UNP 10 1 expression tag VAL 30 4WRS A P11309 UNP 11 1 expression tag ASP 31 4WRS A P11309 UNP 12 1 expression tag GLY 32 4WRS A P11309 UNP 13 5 2 3 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A TYR 38 A TYR 19 A GLY 47 A GLY 28 A GLY 50 A GLY 31 A ARG 57 A ARG 38 A LEU 62 A LEU 43 A GLU 70 A GLU 51 A SER 115 A SER 96 A GLU 121 A GLU 102 A LEU 106 A LEU 87 A GLU 111 A GLU 92 A TRP 77 A TRP 58 A GLU 79 A GLU 60 A ARG 85 A ARG 66 A PRO 87 A PRO 68 A VAL 126 A VAL 107 A ASP 128 A ASP 109 A ILE 173 A ILE 154 A ASP 176 A ASP 157 A GLU 181 A GLU 162 A LEU 184 A LEU 165 A VAL 163 A VAL 144 A LEU 164 A LEU 145 A ALA 191 A ALA 172 A LEU 192 A LEU 173 binding site for residue GOL A 401 A GOL 401 Software 2 binding site for residue GOL A 402 A GOL 402 Software 4 binding site for residue 3U1 A 403 A 3U1 403 Software 14 A ASP 108 A ASP 89 2 1_555 A TRP 109 A TRP 90 2 1_555 A PRO 123 A PRO 104 4 1_555 A GLU 124 A GLU 105 4 1_555 A ASP 176 A ASP 157 4 1_555 A ARG 179 A ARG 160 4 1_555 A LEU 44 A LEU 25 14 1_555 A GLY 45 A GLY 26 14 1_555 A PHE 49 A PHE 30 14 1_555 A ALA 65 A ALA 46 14 1_555 A LYS 67 A LYS 48 14 1_555 A LEU 120 A LEU 101 14 1_555 A GLU 121 A GLU 102 14 1_555 A ARG 122 A ARG 103 14 1_555 A VAL 126 A VAL 107 14 1_555 A ASP 128 A ASP 109 14 1_555 A GLU 171 A GLU 152 14 1_555 A LEU 174 A LEU 155 14 1_555 A ILE 185 A ILE 166 14 1_555 A HOH 592 E HOH 14 1_555 170 P 65