0.018991 0.000000 0.000000 0.000000 0.018828 0.000000 0.000000 0.000000 0.009340 0.00000 0.00000 0.00000 Pletnev, S. Malashkevich, V.N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 52.656 53.113 107.070 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C33 H36 N4 O6 584.662 3-[2-[(Z)-[5-[(Z)-[(3R,4R)-3-ethenyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid non-polymer Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Chem.Biol. CBOLE2 2050 1074-5521 22 1540 1551 10.1016/j.chembiol.2015.10.007 26590639 Molecular Basis of Spectral Diversity in Near-Infrared Phytochrome-Based Fluorescent Proteins. 2015 100 1 CCD 2014-05-01 MARMOSAIC 225 mm CCD SINGLE WAVELENGTH M x-ray 1 1.0 1.0 22-BM APS 1.0 SYNCHROTRON APS BEAMLINE 22-BM 35940.332 BphP1-FP/C20S C20S 1 man polymer 584.662 3-[2-[(Z)-[5-[(Z)-[(3R,4R)-3-ethenyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid 1 syn non-polymer 35.453 CHLORIDE ION 4 syn non-polymer 18.015 water 398 nat water no no MGSHHHHHHGRSMVAGHASGSPAFGTASHSNSEHEEIHLAGSIQPHGALLVVSEHDHRVIQASANAAEFLNLGSVLGVPL AEIDGDLLIKILPHLDPTAEGMPVAVRCRIGNPSTEYCGLMHRPPEGGLIIELERAGPSIDLSGTLAPALERIRTAGSLR ALCDDTVLLFQQCTGYDRVMVYRFDEQGHGLVFSECHVPGLESYFGNRYPSSTVPQMARQLYVRQRVRVLVDVTYQPVPL EPRLSPLTGRDLDMSGCFLRSMSPCHLQYLKDMGVRATLAVSLVVGGKLWGLVVCHHYLPRFIRFELRAICKRLAERIAT RITALES MGSHHHHHHGRSMVAGHASGSPAFGTASHSNSEHEEIHLAGSIQPHGALLVVSEHDHRVIQASANAAEFLNLGSVLGVPL AEIDGDLLIKILPHLDPTAEGMPVAVRCRIGNPSTEYCGLMHRPPEGGLIIELERAGPSIDLSGTLAPALERIRTAGSLR ALCDDTVLLFQQCTGYDRVMVYRFDEQGHGLVFSECHVPGLESYFGNRYPSSTVPQMARQLYVRQRVRVLVDVTYQPVPL EPRLSPLTGRDLDMSGCFLRSMSPCHLQYLKDMGVRATLAVSLVVGGKLWGLVVCHHYLPRFIRFELRAICKRLAERIAT RITALES A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 327 1076 Rhodopseudomonas palustris 562 Escherichia coli plasmid Biological sequence pBAD/His-B 1 2.17 43.32 VAPOR DIFFUSION, HANGING DROP 8.0 3.2 M NaCl, 0.08 M Tris-HCl, pH 8.0 293 citation pdbx_audit_support pdbx_struct_oper_list pdbx_audit_support repository Initial release Database references Author supporting evidence Database references Derived calculations Author supporting evidence 1 0 2015-12-09 1 1 2015-12-16 1 2 2017-09-06 1 3 2019-12-04 _citation.journal_id_CSD _pdbx_audit_support.funding_organization _pdbx_struct_oper_list.symmetry_operation _pdbx_audit_support.funding_organization United States National Institutes of Health/National Cancer Institute (NIH/NCI) CA164468 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM073913 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM108579 Finland EU FP7 Program ERC-2013-ADG-340233 United States National Institutes of Health/National Cancer Institute (NIH/NCI) HHSN261200800001E N RCSB Y RCSB 2015-01-23 REL REL BL8 3-[2-[(Z)-[5-[(Z)-[(3R,4R)-3-ethenyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid CL CHLORIDE ION HOH water BL8 401 2 BL8 BL8 401 A CL 402 3 CL CL 402 A CL 403 3 CL CL 403 A CL 404 3 CL CL 404 A CL 405 3 CL CL 405 A HOH 501 4 HOH HOH 501 A HOH 502 4 HOH HOH 502 A HOH 503 4 HOH HOH 503 A HOH 504 4 HOH HOH 504 A HOH 505 4 HOH HOH 505 A HOH 506 4 HOH HOH 506 A HOH 507 4 HOH HOH 507 A HOH 508 4 HOH HOH 508 A HOH 509 4 HOH HOH 509 A HOH 510 4 HOH HOH 510 A HOH 511 4 HOH HOH 511 A HOH 512 4 HOH HOH 512 A HOH 513 4 HOH HOH 513 A HOH 514 4 HOH HOH 514 A HOH 515 4 HOH HOH 515 A HOH 516 4 HOH HOH 516 A HOH 517 4 HOH HOH 517 A HOH 518 4 HOH HOH 518 A HOH 519 4 HOH HOH 519 A HOH 520 4 HOH HOH 520 A HOH 521 4 HOH HOH 521 A HOH 522 4 HOH HOH 522 A HOH 523 4 HOH HOH 523 A HOH 524 4 HOH HOH 524 A HOH 525 4 HOH HOH 525 A HOH 526 4 HOH HOH 526 A HOH 527 4 HOH HOH 527 A HOH 528 4 HOH HOH 528 A HOH 529 4 HOH HOH 529 A HOH 530 4 HOH HOH 530 A HOH 531 4 HOH HOH 531 A HOH 532 4 HOH HOH 532 A HOH 533 4 HOH HOH 533 A HOH 534 4 HOH HOH 534 A HOH 535 4 HOH HOH 535 A HOH 536 4 HOH HOH 536 A HOH 537 4 HOH HOH 537 A HOH 538 4 HOH HOH 538 A HOH 539 4 HOH HOH 539 A HOH 540 4 HOH HOH 540 A HOH 541 4 HOH HOH 541 A HOH 542 4 HOH HOH 542 A HOH 543 4 HOH HOH 543 A HOH 544 4 HOH HOH 544 A HOH 545 4 HOH HOH 545 A HOH 546 4 HOH HOH 546 A HOH 547 4 HOH HOH 547 A HOH 548 4 HOH HOH 548 A HOH 549 4 HOH HOH 549 A HOH 550 4 HOH HOH 550 A HOH 551 4 HOH HOH 551 A HOH 552 4 HOH HOH 552 A HOH 553 4 HOH HOH 553 A HOH 554 4 HOH HOH 554 A HOH 555 4 HOH HOH 555 A HOH 556 4 HOH HOH 556 A HOH 557 4 HOH HOH 557 A HOH 558 4 HOH HOH 558 A HOH 559 4 HOH HOH 559 A HOH 560 4 HOH HOH 560 A HOH 561 4 HOH HOH 561 A HOH 562 4 HOH HOH 562 A HOH 563 4 HOH HOH 563 A HOH 564 4 HOH HOH 564 A HOH 565 4 HOH HOH 565 A HOH 566 4 HOH HOH 566 A HOH 567 4 HOH HOH 567 A HOH 568 4 HOH HOH 568 A HOH 569 4 HOH HOH 569 A HOH 570 4 HOH HOH 570 A HOH 571 4 HOH HOH 571 A HOH 572 4 HOH HOH 572 A HOH 573 4 HOH HOH 573 A HOH 574 4 HOH HOH 574 A HOH 575 4 HOH HOH 575 A HOH 576 4 HOH HOH 576 A HOH 577 4 HOH HOH 577 A HOH 578 4 HOH HOH 578 A HOH 579 4 HOH HOH 579 A HOH 580 4 HOH HOH 580 A HOH 581 4 HOH HOH 581 A HOH 582 4 HOH HOH 582 A HOH 583 4 HOH HOH 583 A HOH 584 4 HOH HOH 584 A HOH 585 4 HOH HOH 585 A HOH 586 4 HOH HOH 586 A HOH 587 4 HOH HOH 587 A HOH 588 4 HOH HOH 588 A HOH 589 4 HOH HOH 589 A HOH 590 4 HOH HOH 590 A HOH 591 4 HOH HOH 591 A HOH 592 4 HOH HOH 592 A HOH 593 4 HOH HOH 593 A HOH 594 4 HOH HOH 594 A HOH 595 4 HOH HOH 595 A HOH 596 4 HOH HOH 596 A HOH 597 4 HOH HOH 597 A HOH 598 4 HOH HOH 598 A HOH 599 4 HOH HOH 599 A HOH 600 4 HOH HOH 600 A HOH 601 4 HOH HOH 601 A HOH 602 4 HOH HOH 602 A HOH 603 4 HOH HOH 603 A HOH 604 4 HOH HOH 604 A HOH 605 4 HOH HOH 605 A HOH 606 4 HOH HOH 606 A HOH 607 4 HOH HOH 607 A HOH 608 4 HOH HOH 608 A HOH 609 4 HOH HOH 609 A HOH 610 4 HOH HOH 610 A HOH 611 4 HOH HOH 611 A HOH 612 4 HOH HOH 612 A HOH 613 4 HOH HOH 613 A HOH 614 4 HOH HOH 614 A HOH 615 4 HOH HOH 615 A HOH 616 4 HOH HOH 616 A HOH 617 4 HOH HOH 617 A HOH 618 4 HOH HOH 618 A HOH 619 4 HOH HOH 619 A HOH 620 4 HOH HOH 620 A HOH 621 4 HOH HOH 621 A HOH 622 4 HOH HOH 622 A HOH 623 4 HOH HOH 623 A HOH 624 4 HOH HOH 624 A HOH 625 4 HOH HOH 625 A HOH 626 4 HOH HOH 626 A HOH 627 4 HOH HOH 627 A HOH 628 4 HOH HOH 628 A HOH 629 4 HOH HOH 629 A HOH 630 4 HOH HOH 630 A HOH 631 4 HOH HOH 631 A HOH 632 4 HOH HOH 632 A HOH 633 4 HOH HOH 633 A HOH 634 4 HOH HOH 634 A HOH 635 4 HOH HOH 635 A HOH 636 4 HOH HOH 636 A HOH 637 4 HOH HOH 637 A HOH 638 4 HOH HOH 638 A HOH 639 4 HOH HOH 639 A HOH 640 4 HOH HOH 640 A HOH 641 4 HOH HOH 641 A HOH 642 4 HOH HOH 642 A HOH 643 4 HOH HOH 643 A HOH 644 4 HOH HOH 644 A HOH 645 4 HOH HOH 645 A HOH 646 4 HOH HOH 646 A HOH 647 4 HOH HOH 647 A HOH 648 4 HOH HOH 648 A HOH 649 4 HOH HOH 649 A HOH 650 4 HOH HOH 650 A HOH 651 4 HOH HOH 651 A HOH 652 4 HOH HOH 652 A HOH 653 4 HOH HOH 653 A HOH 654 4 HOH HOH 654 A HOH 655 4 HOH HOH 655 A HOH 656 4 HOH HOH 656 A HOH 657 4 HOH HOH 657 A HOH 658 4 HOH HOH 658 A HOH 659 4 HOH HOH 659 A HOH 660 4 HOH HOH 660 A HOH 661 4 HOH HOH 661 A HOH 662 4 HOH HOH 662 A HOH 663 4 HOH HOH 663 A HOH 664 4 HOH HOH 664 A HOH 665 4 HOH HOH 665 A HOH 666 4 HOH HOH 666 A HOH 667 4 HOH HOH 667 A HOH 668 4 HOH HOH 668 A HOH 669 4 HOH HOH 669 A HOH 670 4 HOH HOH 670 A HOH 671 4 HOH HOH 671 A HOH 672 4 HOH HOH 672 A HOH 673 4 HOH HOH 673 A HOH 674 4 HOH HOH 674 A HOH 675 4 HOH HOH 675 A HOH 676 4 HOH HOH 676 A HOH 677 4 HOH HOH 677 A HOH 678 4 HOH HOH 678 A HOH 679 4 HOH HOH 679 A HOH 680 4 HOH HOH 680 A HOH 681 4 HOH HOH 681 A HOH 682 4 HOH HOH 682 A HOH 683 4 HOH HOH 683 A HOH 684 4 HOH HOH 684 A HOH 685 4 HOH HOH 685 A HOH 686 4 HOH HOH 686 A HOH 687 4 HOH HOH 687 A HOH 688 4 HOH HOH 688 A HOH 689 4 HOH HOH 689 A HOH 690 4 HOH HOH 690 A HOH 691 4 HOH HOH 691 A HOH 692 4 HOH HOH 692 A HOH 693 4 HOH HOH 693 A HOH 694 4 HOH HOH 694 A HOH 695 4 HOH HOH 695 A HOH 696 4 HOH HOH 696 A HOH 697 4 HOH HOH 697 A HOH 698 4 HOH HOH 698 A HOH 699 4 HOH HOH 699 A HOH 700 4 HOH HOH 700 A HOH 701 4 HOH HOH 701 A HOH 702 4 HOH HOH 702 A HOH 703 4 HOH HOH 703 A HOH 704 4 HOH HOH 704 A HOH 705 4 HOH HOH 705 A HOH 706 4 HOH HOH 706 A HOH 707 4 HOH HOH 707 A HOH 708 4 HOH HOH 708 A HOH 709 4 HOH HOH 709 A HOH 710 4 HOH HOH 710 A HOH 711 4 HOH HOH 711 A HOH 712 4 HOH HOH 712 A HOH 713 4 HOH HOH 713 A HOH 714 4 HOH HOH 714 A HOH 715 4 HOH HOH 715 A HOH 716 4 HOH HOH 716 A HOH 717 4 HOH HOH 717 A HOH 718 4 HOH HOH 718 A HOH 719 4 HOH HOH 719 A HOH 720 4 HOH HOH 720 A HOH 721 4 HOH HOH 721 A HOH 722 4 HOH HOH 722 A HOH 723 4 HOH HOH 723 A HOH 724 4 HOH HOH 724 A HOH 725 4 HOH HOH 725 A HOH 726 4 HOH HOH 726 A HOH 727 4 HOH HOH 727 A HOH 728 4 HOH HOH 728 A HOH 729 4 HOH HOH 729 A HOH 730 4 HOH HOH 730 A HOH 731 4 HOH HOH 731 A HOH 732 4 HOH HOH 732 A HOH 733 4 HOH HOH 733 A HOH 734 4 HOH HOH 734 A HOH 735 4 HOH HOH 735 A HOH 736 4 HOH HOH 736 A HOH 737 4 HOH HOH 737 A HOH 738 4 HOH HOH 738 A HOH 739 4 HOH HOH 739 A HOH 740 4 HOH HOH 740 A HOH 741 4 HOH HOH 741 A HOH 742 4 HOH HOH 742 A HOH 743 4 HOH HOH 743 A HOH 744 4 HOH HOH 744 A HOH 745 4 HOH HOH 745 A HOH 746 4 HOH HOH 746 A HOH 747 4 HOH HOH 747 A HOH 748 4 HOH HOH 748 A HOH 749 4 HOH HOH 749 A HOH 750 4 HOH HOH 750 A HOH 751 4 HOH HOH 751 A HOH 752 4 HOH HOH 752 A HOH 753 4 HOH HOH 753 A HOH 754 4 HOH HOH 754 A HOH 755 4 HOH HOH 755 A HOH 756 4 HOH HOH 756 A HOH 757 4 HOH HOH 757 A HOH 758 4 HOH HOH 758 A HOH 759 4 HOH HOH 759 A HOH 760 4 HOH HOH 760 A HOH 761 4 HOH HOH 761 A HOH 762 4 HOH HOH 762 A HOH 763 4 HOH HOH 763 A HOH 764 4 HOH HOH 764 A HOH 765 4 HOH HOH 765 A HOH 766 4 HOH HOH 766 A HOH 767 4 HOH HOH 767 A HOH 768 4 HOH HOH 768 A HOH 769 4 HOH HOH 769 A HOH 770 4 HOH HOH 770 A HOH 771 4 HOH HOH 771 A HOH 772 4 HOH HOH 772 A HOH 773 4 HOH HOH 773 A HOH 774 4 HOH HOH 774 A HOH 775 4 HOH HOH 775 A HOH 776 4 HOH HOH 776 A HOH 777 4 HOH HOH 777 A HOH 778 4 HOH HOH 778 A HOH 779 4 HOH HOH 779 A HOH 780 4 HOH HOH 780 A HOH 781 4 HOH HOH 781 A HOH 782 4 HOH HOH 782 A HOH 783 4 HOH HOH 783 A HOH 784 4 HOH HOH 784 A HOH 785 4 HOH HOH 785 A HOH 786 4 HOH HOH 786 A HOH 787 4 HOH HOH 787 A HOH 788 4 HOH HOH 788 A HOH 789 4 HOH HOH 789 A HOH 790 4 HOH HOH 790 A HOH 791 4 HOH HOH 791 A HOH 792 4 HOH HOH 792 A HOH 793 4 HOH HOH 793 A HOH 794 4 HOH HOH 794 A HOH 795 4 HOH HOH 795 A HOH 796 4 HOH HOH 796 A HOH 797 4 HOH HOH 797 A HOH 798 4 HOH HOH 798 A HOH 799 4 HOH HOH 799 A HOH 800 4 HOH HOH 800 A HOH 801 4 HOH HOH 801 A HOH 802 4 HOH HOH 802 A HOH 803 4 HOH HOH 803 A HOH 804 4 HOH HOH 804 A HOH 805 4 HOH HOH 805 A HOH 806 4 HOH HOH 806 A HOH 807 4 HOH HOH 807 A HOH 808 4 HOH HOH 808 A HOH 809 4 HOH HOH 809 A HOH 810 4 HOH HOH 810 A HOH 811 4 HOH HOH 811 A HOH 812 4 HOH HOH 812 A HOH 813 4 HOH HOH 813 A HOH 814 4 HOH HOH 814 A HOH 815 4 HOH HOH 815 A HOH 816 4 HOH HOH 816 A HOH 817 4 HOH HOH 817 A HOH 818 4 HOH HOH 818 A HOH 819 4 HOH HOH 819 A HOH 820 4 HOH HOH 820 A HOH 821 4 HOH HOH 821 A HOH 822 4 HOH HOH 822 A HOH 823 4 HOH HOH 823 A HOH 824 4 HOH HOH 824 A HOH 825 4 HOH HOH 825 A HOH 826 4 HOH HOH 826 A HOH 827 4 HOH HOH 827 A HOH 828 4 HOH HOH 828 A HOH 829 4 HOH HOH 829 A HOH 830 4 HOH HOH 830 A HOH 831 4 HOH HOH 831 A HOH 832 4 HOH HOH 832 A HOH 833 4 HOH HOH 833 A HOH 834 4 HOH HOH 834 A HOH 835 4 HOH HOH 835 A HOH 836 4 HOH HOH 836 A HOH 837 4 HOH HOH 837 A HOH 838 4 HOH HOH 838 A HOH 839 4 HOH HOH 839 A HOH 840 4 HOH HOH 840 A HOH 841 4 HOH HOH 841 A HOH 842 4 HOH HOH 842 A HOH 843 4 HOH HOH 843 A HOH 844 4 HOH HOH 844 A HOH 845 4 HOH HOH 845 A HOH 846 4 HOH HOH 846 A HOH 847 4 HOH HOH 847 A HOH 848 4 HOH HOH 848 A HOH 849 4 HOH HOH 849 A HOH 850 4 HOH HOH 850 A HOH 851 4 HOH HOH 851 A HOH 852 4 HOH HOH 852 A HOH 853 4 HOH HOH 853 A HOH 854 4 HOH HOH 854 A HOH 855 4 HOH HOH 855 A HOH 856 4 HOH HOH 856 A HOH 857 4 HOH HOH 857 A HOH 858 4 HOH HOH 858 A HOH 859 4 HOH HOH 859 A HOH 860 4 HOH HOH 860 A HOH 861 4 HOH HOH 861 A HOH 862 4 HOH HOH 862 A HOH 863 4 HOH HOH 863 A HOH 864 4 HOH HOH 864 A HOH 865 4 HOH HOH 865 A HOH 866 4 HOH HOH 866 A HOH 867 4 HOH HOH 867 A HOH 868 4 HOH HOH 868 A HOH 869 4 HOH HOH 869 A HOH 870 4 HOH HOH 870 A HOH 871 4 HOH HOH 871 A HOH 872 4 HOH HOH 872 A HOH 873 4 HOH HOH 873 A HOH 874 4 HOH HOH 874 A HOH 875 4 HOH HOH 875 A HOH 876 4 HOH HOH 876 A HOH 877 4 HOH HOH 877 A HOH 878 4 HOH HOH 878 A HOH 879 4 HOH HOH 879 A HOH 880 4 HOH HOH 880 A HOH 881 4 HOH HOH 881 A HOH 882 4 HOH HOH 882 A HOH 883 4 HOH HOH 883 A HOH 884 4 HOH HOH 884 A HOH 885 4 HOH HOH 885 A HOH 886 4 HOH HOH 886 A HOH 887 4 HOH HOH 887 A HOH 888 4 HOH HOH 888 A HOH 889 4 HOH HOH 889 A HOH 890 4 HOH HOH 890 A HOH 891 4 HOH HOH 891 A HOH 892 4 HOH HOH 892 A HOH 893 4 HOH HOH 893 A HOH 894 4 HOH HOH 894 A HOH 895 4 HOH HOH 895 A HOH 896 4 HOH HOH 896 A HOH 897 4 HOH HOH 897 A HOH 898 4 HOH HOH 898 A n 1 -11 A n 2 -10 A n 3 -9 A n 4 -8 A n 5 -7 A n 6 -6 A n 7 -5 A n 8 -4 A n 9 -3 A n 10 -2 A ARG -1 n 11 ARG -1 A SER 0 n 12 SER 0 A MET 1 n 13 MET 1 A VAL 2 n 14 VAL 2 A ALA 3 n 15 ALA 3 A GLY 4 n 16 GLY 4 A HIS 5 n 17 HIS 5 A ALA 6 n 18 ALA 6 A SER 7 n 19 SER 7 A GLY 8 n 20 GLY 8 A n 21 9 A n 22 10 A n 23 11 A n 24 12 A n 25 13 A n 26 14 A n 27 15 A n 28 16 A n 29 17 A n 30 18 A n 31 19 A n 32 20 A n 33 21 A n 34 22 A GLU 23 n 35 GLU 23 A GLU 24 n 36 GLU 24 A ILE 25 n 37 ILE 25 A HIS 26 n 38 HIS 26 A LEU 27 n 39 LEU 27 A ALA 28 n 40 ALA 28 A GLY 29 n 41 GLY 29 A SER 30 n 42 SER 30 A ILE 31 n 43 ILE 31 A GLN 32 n 44 GLN 32 A PRO 33 n 45 PRO 33 A HIS 34 n 46 HIS 34 A GLY 35 n 47 GLY 35 A ALA 36 n 48 ALA 36 A LEU 37 n 49 LEU 37 A LEU 38 n 50 LEU 38 A VAL 39 n 51 VAL 39 A VAL 40 n 52 VAL 40 A SER 41 n 53 SER 41 A GLU 42 n 54 GLU 42 A HIS 43 n 55 HIS 43 A ASP 44 n 56 ASP 44 A HIS 45 n 57 HIS 45 A ARG 46 n 58 ARG 46 A VAL 47 n 59 VAL 47 A ILE 48 n 60 ILE 48 A GLN 49 n 61 GLN 49 A ALA 50 n 62 ALA 50 A SER 51 n 63 SER 51 A ALA 52 n 64 ALA 52 A ASN 53 n 65 ASN 53 A ALA 54 n 66 ALA 54 A ALA 55 n 67 ALA 55 A GLU 56 n 68 GLU 56 A PHE 57 n 69 PHE 57 A LEU 58 n 70 LEU 58 A ASN 59 n 71 ASN 59 A LEU 60 n 72 LEU 60 A GLY 61 n 73 GLY 61 A SER 62 n 74 SER 62 A VAL 63 n 75 VAL 63 A LEU 64 n 76 LEU 64 A GLY 65 n 77 GLY 65 A VAL 66 n 78 VAL 66 A PRO 67 n 79 PRO 67 A LEU 68 n 80 LEU 68 A ALA 69 n 81 ALA 69 A GLU 70 n 82 GLU 70 A ILE 71 n 83 ILE 71 A ASP 72 n 84 ASP 72 A GLY 73 n 85 GLY 73 A ASP 74 n 86 ASP 74 A LEU 75 n 87 LEU 75 A LEU 76 n 88 LEU 76 A ILE 77 n 89 ILE 77 A LYS 78 n 90 LYS 78 A ILE 79 n 91 ILE 79 A LEU 80 n 92 LEU 80 A PRO 81 n 93 PRO 81 A HIS 82 n 94 HIS 82 A LEU 83 n 95 LEU 83 A ASP 84 n 96 ASP 84 A PRO 85 n 97 PRO 85 A THR 86 n 98 THR 86 A ALA 87 n 99 ALA 87 A GLU 88 n 100 GLU 88 A GLY 89 n 101 GLY 89 A MET 90 n 102 MET 90 A PRO 91 n 103 PRO 91 A VAL 92 n 104 VAL 92 A ALA 93 n 105 ALA 93 A VAL 94 n 106 VAL 94 A ARG 95 n 107 ARG 95 A CYS 96 n 108 CYS 96 A ARG 97 n 109 ARG 97 A ILE 98 n 110 ILE 98 A GLY 99 n 111 GLY 99 A ASN 100 n 112 ASN 100 A PRO 101 n 113 PRO 101 A SER 102 n 114 SER 102 A THR 103 n 115 THR 103 A GLU 104 n 116 GLU 104 A TYR 105 n 117 TYR 105 A CYS 106 n 118 CYS 106 A GLY 107 n 119 GLY 107 A LEU 108 n 120 LEU 108 A MET 109 n 121 MET 109 A HIS 110 n 122 HIS 110 A ARG 111 n 123 ARG 111 A PRO 112 n 124 PRO 112 A PRO 113 n 125 PRO 113 A GLU 114 n 126 GLU 114 A GLY 115 n 127 GLY 115 A GLY 116 n 128 GLY 116 A LEU 117 n 129 LEU 117 A ILE 118 n 130 ILE 118 A ILE 119 n 131 ILE 119 A GLU 120 n 132 GLU 120 A LEU 121 n 133 LEU 121 A GLU 122 n 134 GLU 122 A ARG 123 n 135 ARG 123 A ALA 124 n 136 ALA 124 A GLY 125 n 137 GLY 125 A PRO 126 n 138 PRO 126 A SER 127 n 139 SER 127 A ILE 128 n 140 ILE 128 A ASP 129 n 141 ASP 129 A LEU 130 n 142 LEU 130 A SER 131 n 143 SER 131 A GLY 132 n 144 GLY 132 A THR 133 n 145 THR 133 A LEU 134 n 146 LEU 134 A ALA 135 n 147 ALA 135 A PRO 136 n 148 PRO 136 A ALA 137 n 149 ALA 137 A LEU 138 n 150 LEU 138 A GLU 139 n 151 GLU 139 A ARG 140 n 152 ARG 140 A ILE 141 n 153 ILE 141 A ARG 142 n 154 ARG 142 A THR 143 n 155 THR 143 A ALA 144 n 156 ALA 144 A GLY 145 n 157 GLY 145 A SER 146 n 158 SER 146 A LEU 147 n 159 LEU 147 A ARG 148 n 160 ARG 148 A ALA 149 n 161 ALA 149 A LEU 150 n 162 LEU 150 A CYS 151 n 163 CYS 151 A ASP 152 n 164 ASP 152 A ASP 153 n 165 ASP 153 A THR 154 n 166 THR 154 A VAL 155 n 167 VAL 155 A LEU 156 n 168 LEU 156 A LEU 157 n 169 LEU 157 A PHE 158 n 170 PHE 158 A GLN 159 n 171 GLN 159 A GLN 160 n 172 GLN 160 A CYS 161 n 173 CYS 161 A THR 162 n 174 THR 162 A GLY 163 n 175 GLY 163 A TYR 164 n 176 TYR 164 A ASP 165 n 177 ASP 165 A ARG 166 n 178 ARG 166 A VAL 167 n 179 VAL 167 A MET 168 n 180 MET 168 A VAL 169 n 181 VAL 169 A TYR 170 n 182 TYR 170 A ARG 171 n 183 ARG 171 A PHE 172 n 184 PHE 172 A ASP 173 n 185 ASP 173 A GLU 174 n 186 GLU 174 A GLN 175 n 187 GLN 175 A GLY 176 n 188 GLY 176 A HIS 177 n 189 HIS 177 A GLY 178 n 190 GLY 178 A LEU 179 n 191 LEU 179 A VAL 180 n 192 VAL 180 A PHE 181 n 193 PHE 181 A SER 182 n 194 SER 182 A GLU 183 n 195 GLU 183 A CYS 184 n 196 CYS 184 A HIS 185 n 197 HIS 185 A VAL 186 n 198 VAL 186 A PRO 187 n 199 PRO 187 A GLY 188 n 200 GLY 188 A LEU 189 n 201 LEU 189 A GLU 190 n 202 GLU 190 A SER 191 n 203 SER 191 A TYR 192 n 204 TYR 192 A PHE 193 n 205 PHE 193 A GLY 194 n 206 GLY 194 A ASN 195 n 207 ASN 195 A ARG 196 n 208 ARG 196 A TYR 197 n 209 TYR 197 A PRO 198 n 210 PRO 198 A SER 199 n 211 SER 199 A SER 200 n 212 SER 200 A THR 201 n 213 THR 201 A VAL 202 n 214 VAL 202 A PRO 203 n 215 PRO 203 A GLN 204 n 216 GLN 204 A MET 205 n 217 MET 205 A ALA 206 n 218 ALA 206 A ARG 207 n 219 ARG 207 A GLN 208 n 220 GLN 208 A LEU 209 n 221 LEU 209 A TYR 210 n 222 TYR 210 A VAL 211 n 223 VAL 211 A ARG 212 n 224 ARG 212 A GLN 213 n 225 GLN 213 A ARG 214 n 226 ARG 214 A VAL 215 n 227 VAL 215 A ARG 216 n 228 ARG 216 A VAL 217 n 229 VAL 217 A LEU 218 n 230 LEU 218 A VAL 219 n 231 VAL 219 A ASP 220 n 232 ASP 220 A VAL 221 n 233 VAL 221 A THR 222 n 234 THR 222 A TYR 223 n 235 TYR 223 A GLN 224 n 236 GLN 224 A PRO 225 n 237 PRO 225 A VAL 226 n 238 VAL 226 A PRO 227 n 239 PRO 227 A LEU 228 n 240 LEU 228 A GLU 229 n 241 GLU 229 A PRO 230 n 242 PRO 230 A ARG 231 n 243 ARG 231 A LEU 232 n 244 LEU 232 A SER 233 n 245 SER 233 A PRO 234 n 246 PRO 234 A LEU 235 n 247 LEU 235 A THR 236 n 248 THR 236 A GLY 237 n 249 GLY 237 A ARG 238 n 250 ARG 238 A ASP 239 n 251 ASP 239 A LEU 240 n 252 LEU 240 A ASP 241 n 253 ASP 241 A MET 242 n 254 MET 242 A SER 243 n 255 SER 243 A GLY 244 n 256 GLY 244 A CYS 245 n 257 CYS 245 A PHE 246 n 258 PHE 246 A LEU 247 n 259 LEU 247 A ARG 248 n 260 ARG 248 A SER 249 n 261 SER 249 A MET 250 n 262 MET 250 A SER 251 n 263 SER 251 A PRO 252 n 264 PRO 252 A CYS 253 n 265 CYS 253 A HIS 254 n 266 HIS 254 A LEU 255 n 267 LEU 255 A GLN 256 n 268 GLN 256 A TYR 257 n 269 TYR 257 A LEU 258 n 270 LEU 258 A LYS 259 n 271 LYS 259 A ASP 260 n 272 ASP 260 A MET 261 n 273 MET 261 A GLY 262 n 274 GLY 262 A VAL 263 n 275 VAL 263 A ARG 264 n 276 ARG 264 A ALA 265 n 277 ALA 265 A THR 266 n 278 THR 266 A LEU 267 n 279 LEU 267 A ALA 268 n 280 ALA 268 A VAL 269 n 281 VAL 269 A SER 270 n 282 SER 270 A LEU 271 n 283 LEU 271 A VAL 272 n 284 VAL 272 A VAL 273 n 285 VAL 273 A GLY 274 n 286 GLY 274 A GLY 275 n 287 GLY 275 A LYS 276 n 288 LYS 276 A LEU 277 n 289 LEU 277 A TRP 278 n 290 TRP 278 A GLY 279 n 291 GLY 279 A LEU 280 n 292 LEU 280 A VAL 281 n 293 VAL 281 A VAL 282 n 294 VAL 282 A CYS 283 n 295 CYS 283 A HIS 284 n 296 HIS 284 A HIS 285 n 297 HIS 285 A TYR 286 n 298 TYR 286 A LEU 287 n 299 LEU 287 A PRO 288 n 300 PRO 288 A ARG 289 n 301 ARG 289 A PHE 290 n 302 PHE 290 A ILE 291 n 303 ILE 291 A ARG 292 n 304 ARG 292 A PHE 293 n 305 PHE 293 A GLU 294 n 306 GLU 294 A LEU 295 n 307 LEU 295 A ARG 296 n 308 ARG 296 A ALA 297 n 309 ALA 297 A ILE 298 n 310 ILE 298 A CYS 299 n 311 CYS 299 A LYS 300 n 312 LYS 300 A ARG 301 n 313 ARG 301 A LEU 302 n 314 LEU 302 A ALA 303 n 315 ALA 303 A GLU 304 n 316 GLU 304 A ARG 305 n 317 ARG 305 A ILE 306 n 318 ILE 306 A ALA 307 n 319 ALA 307 A THR 308 n 320 THR 308 A ARG 309 n 321 ARG 309 A ILE 310 n 322 ILE 310 A THR 311 n 323 THR 311 A ALA 312 n 324 ALA 312 A LEU 313 n 325 LEU 313 A GLU 314 n 326 GLU 314 A SER 315 n 327 SER 315 A author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 31 A N ILE 43 A O VAL 226 A O VAL 238 A O GLU 229 A O GLU 241 A N ALA 50 A N ALA 62 A O GLN 49 A O GLN 61 A N VAL 39 A N VAL 51 A N LEU 38 A N LEU 50 A O ILE 119 A O ILE 131 A O GLU 120 A O GLU 132 A N LEU 108 A N LEU 120 A O GLY 107 A O GLY 119 A N VAL 94 A N VAL 106 A O TYR 197 A O TYR 209 A N GLY 178 A N GLY 190 A O LEU 179 A O LEU 191 A N ARG 171 A N ARG 183 A N TYR 170 A N TYR 182 A O LEU 280 A O LEU 292 A O CYS 283 A O CYS 295 A N LEU 267 A N LEU 279 A O ALA 268 A O ALA 280 A N ARG 216 A N ARG 228 1 A MET -11 A MET 1 1 Y 1 A GLY -10 A GLY 2 1 Y 1 A SER -9 A SER 3 1 Y 1 A HIS -8 A HIS 4 1 Y 1 A HIS -7 A HIS 5 1 Y 1 A HIS -6 A HIS 6 1 Y 1 A HIS -5 A HIS 7 1 Y 1 A HIS -4 A HIS 8 1 Y 1 A HIS -3 A HIS 9 1 Y 1 A GLY -2 A GLY 10 1 Y 1 A SER 9 A SER 21 1 Y 1 A PRO 10 A PRO 22 1 Y 1 A ALA 11 A ALA 23 1 Y 1 A PHE 12 A PHE 24 1 Y 1 A GLY 13 A GLY 25 1 Y 1 A THR 14 A THR 26 1 Y 1 A ALA 15 A ALA 27 1 Y 1 A SER 16 A SER 28 1 Y 1 A HIS 17 A HIS 29 1 Y 1 A SER 18 A SER 30 1 Y 1 A ASN 19 A ASN 31 1 Y 1 A SER 20 A SER 32 1 Y 1 A GLU 21 A GLU 33 1 Y 1 A HIS 22 A HIS 34 1 Y 1 A A O O HOH HOH 690 895 1.79 1 A A O O HOH HOH 838 846 1.99 1 A A O O HOH HOH 502 791 2.01 1 A A O O HOH HOH 735 855 2.11 1 A A O O HOH HOH 533 652 2.13 1 A A OG1 O THR HOH 143 874 2.13 1 A A O O HOH HOH 531 613 2.15 1 A A OE2 O GLU HOH 139 501 2.16 A 1 A A OE1 O GLU HOH 104 502 2.18 1 A A ASP PRO 84 85 -149.42 1 A A GLU SER 314 315 B 135.65 1 6.93 1.10 114.20 121.13 A A A CA CB SG CYS CYS CYS 106 106 106 A A A N 1 -11.82 1.60 100.20 88.38 A A A CG SD CE MET MET MET 109 109 109 N 1 -3.51 0.50 120.30 116.79 A A A NE CZ NH1 ARG ARG ARG 166 166 166 N 1 3.22 0.50 120.30 123.52 A A A NE CZ NH2 ARG ARG ARG 166 166 166 N 1 3.96 0.50 120.30 124.26 A A A NE CZ NH2 ARG ARG ARG 214 214 214 N 1 3.28 0.50 120.30 123.58 A A A NE CZ NH2 ARG ARG ARG 231 231 231 N 1 -11.83 1.80 114.00 102.17 A A A CA CB SG CYS CYS CYS 253 253 253 B B B N 1 3.77 0.50 120.30 124.07 A A A NE CZ NH1 ARG ARG ARG 296 296 296 N 1 A A CE1 CZ TYR TYR 164 164 -0.083 0.013 1.381 1.298 N 1 A A CL CL CL CL 404 405 1.46 1_555 4_445 1 A A O O HOH HOH 650 651 1.80 1_555 3_654 1 A A O O HOH HOH 619 623 2.07 1_555 4_545 1 A A O O HOH HOH 635 649 2.08 1_555 3_544 1 A A O O HOH HOH 505 531 2.12 1_555 4_445 1 A ALA 3 -123.14 -168.11 1 A LEU 27 -107.32 48.26 1 A VAL 63 -139.59 -47.35 1 A GLU 88 32.68 39.04 18.45 -0.09000 0.00000 0.00000 -0.10000 0.00000 0.20000 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.208 0.175 0.177 1.64 50.00 1850 37535 5.100 97.5 2.227 0.075 RANDOM 1 THROUGHOUT 0.000 0.106 0.102 1.64 50.00 398 2782 47 0 2337 1.640 50.000 4XTQ 37535 0.05800 1 10.9000 7.100 99.9 0.76000 1.64 1.70 1 6.50 99.9 refinement REFMAC 5.8.0049 data reduction DENZO data extraction PDB_EXTRACT 3.15 data scaling SCALEPACK phasing MOLREP BphP1-FP/C20S Crystal structure of a mutant (C20S) of a near-infrared fluorescent protein BphP1-FP 1 N N 2 N N 3 N N 3 N N 3 N N 3 N N 4 N N A GLY 4 A GLY 16 HELX_P A GLY 8 A GLY 20 5 AA1 5 A GLU 24 A GLU 36 HELX_P A ALA 28 A ALA 40 5 AA2 5 A ASN 53 A ASN 65 HELX_P A LEU 58 A LEU 70 1 AA3 6 A PRO 67 A PRO 79 HELX_P A ILE 71 A ILE 83 5 AA4 5 A ASP 74 A ASP 86 HELX_P A ASP 84 A ASP 96 1 AA5 11 A PRO 85 A PRO 97 HELX_P A GLU 88 A GLU 100 5 AA6 4 A LEU 130 A LEU 142 HELX_P A THR 143 A THR 155 1 AA7 14 A SER 146 A SER 158 HELX_P A GLY 163 A GLY 175 1 AA8 18 A PRO 198 A PRO 210 HELX_P A VAL 202 A VAL 214 5 AA9 5 A PRO 203 A PRO 215 HELX_P A GLN 213 A GLN 225 1 AB1 11 A SER 251 A SER 263 HELX_P A GLY 262 A GLY 274 1 AB2 12 A ARG 292 A ARG 304 HELX_P A SER 315 A SER 327 1 AB3 24 covale 1.850 none A A A CYS 253 A SG CYS 265 1_555 A BL8 401 B CAC BL8 1_555 covale 1.767 none B B A CYS 253 A SG CYS 265 1_555 A BL8 401 B CBC BL8 1_555 FLUORESCENT PROTEIN Bacteriophytochrome, BphP, Biliverdin, Near-infrared Fluorescent Protein, FLUORESCENT PROTEIN A MET 90 A MET 102 1 A PRO 91 A PRO 103 2.33 A ASN 100 A ASN 112 1 A PRO 101 A PRO 113 1.75 A GLU 229 A GLU 241 1 A PRO 230 A PRO 242 -14.62 4XTQ PDB 1 1 4XTQ -11 315 4XTQ -11 315 4XTQ A 1 1 327 7 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A SER 30 A SER 42 A ILE 31 A ILE 43 A VAL 226 A VAL 238 A GLU 229 A GLU 241 A ARG 46 A ARG 58 A SER 51 A SER 63 A ALA 36 A ALA 48 A SER 41 A SER 53 A LEU 117 A LEU 129 A ARG 123 A ARG 135 A THR 103 A THR 115 A HIS 110 A HIS 122 A VAL 92 A VAL 104 A ILE 98 A ILE 110 A ARG 196 A ARG 208 A TYR 197 A TYR 209 A GLY 178 A GLY 190 A HIS 185 A HIS 197 A ARG 166 A ARG 178 A PHE 172 A PHE 184 A LYS 276 A LYS 288 A HIS 285 A HIS 297 A ALA 265 A ALA 277 A VAL 273 A VAL 285 A VAL 215 A VAL 227 A LEU 218 A LEU 230 binding site for residue BL8 A 401 A BL8 401 Software 23 binding site for residue CL A 402 A CL 402 Software 2 binding site for residue CL A 403 A CL 403 Software 2 binding site for residue CL A 404 A CL 404 Software 3 binding site for residue CL A 405 A CL 405 Software 5 A TYR 197 A TYR 209 23 1_555 A SER 200 A SER 212 23 1_555 A THR 201 A THR 213 23 1_555 A VAL 202 A VAL 214 23 1_555 A PRO 203 A PRO 215 23 1_555 A TYR 210 A TYR 222 23 1_555 A ARG 216 A ARG 228 23 1_555 A ARG 248 A ARG 260 23 1_555 A MET 250 A MET 262 23 1_555 A SER 251 A SER 263 23 1_555 A CYS 253 A CYS 265 23 1_555 A HIS 254 A HIS 266 23 1_555 A TYR 257 A TYR 269 23 1_555 A ALA 268 A ALA 280 23 1_555 A VAL 282 A VAL 294 23 1_555 A HIS 284 A HIS 296 23 1_555 A HOH 520 G HOH 23 1_555 A HOH 674 G HOH 23 1_555 A HOH 684 G HOH 23 1_555 A HOH 710 G HOH 23 1_555 A HOH 711 G HOH 23 1_555 A HOH 780 G HOH 23 1_555 A HOH 850 G HOH 23 1_555 A SER 146 A SER 158 2 1_555 A LEU 147 A LEU 159 2 1_555 A GLU 42 A GLU 54 2 1_555 A ARG 95 A ARG 107 2 3_654 A ARG 148 A ARG 160 3 1_555 A ARG 264 A ARG 276 3 4_445 A CL 405 F CL 3 4_445 A ARG 148 A ARG 160 5 4_545 A PHE 181 A PHE 193 5 4_545 A LEU 287 A LEU 299 5 1_555 A CL 404 E CL 5 4_545 A HOH 662 G HOH 5 1_555 19 P 21 21 21