0.010824
0.000000
0.000000
0.000000
0.006248
0.000000
0.000000
0.000000
0.004764
0.000000
0.000000
0.000000
Osipiuk, J.
Wu, R.
Endres, M.
Joachimiak, A.
Midwest Center for Structural Genomics (MCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.000
90.000
90.000
92.390
160.047
209.912
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
to be published
0353
L,D-transpeptidase from Mycobacterium smegmatis
100
1
CCD
2013-12-16
ADSC QUANTUM 315r
double crystal monochromator
SINGLE WAVELENGTH
M
x-ray
1
0.9792
1.0
19-ID
APS
0.9792
SYNCHROTRON
APS BEAMLINE 19-ID
23933.105
L,D-transpeptidase
UNP residues 71-290
3
man
polymer
94.971
PHOSPHATE ION
4
syn
non-polymer
18.015
water
174
nat
water
ErfK/YbiS/YcfS/YnhG family protein
no
yes
SNAAVSTPVEVAQVEPAAGAVVGVAHPVTVRFAEPVTDRRSAERSLRIASTDTSAGRFRWPEAAV(MSE)EWTPDEFWPA
HSTISLSVGGVKTSFNTGAEVLGVADIDAHTFTVSVDGEVLRK(MSE)PAS(MSE)GKPKFPTPRGTFTALAKEPVVV
(MSE)DSRTIGIPLSDPEGYKLTVNHAVRVTWGGVYVHSAPWSVGSQGYANVSHGCINLSPDNAAWYYD(MSE)VSVGDP
IIVQA
SNAAVSTPVEVAQVEPAAGAVVGVAHPVTVRFAEPVTDRRSAERSLRIASTDTSAGRFRWPEAAVMEWTPDEFWPAHSTI
SLSVGGVKTSFNTGAEVLGVADIDAHTFTVSVDGEVLRKMPASMGKPKFPTPRGTFTALAKEPVVVMDSRTIGIPLSDPE
GYKLTVNHAVRVTWGGVYVHSAPWSVGSQGYANVSHGCINLSPDNAAWYYDMVSVGDPIIVQA
A,B,C
MCSG-APC110730
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ATCC 700084 / mc(2)155
sample
1
223
MSMEI_3449
246196
Mycobacterium smegmatis
469008
Escherichia coli
BL21(DE3)
plasmid
Biological sequence
pMCSG68
1
5.40
77.24
VAPOR DIFFUSION, SITTING DROP
5.6
1M sodium/potassium phosphate buffer
289
Midwest Center for Structural Genomics
MCSG
PSI:Biology
entity_src_gen
pdbx_audit_support
pdbx_struct_assembly
pdbx_struct_oper_list
struct_keywords
pdbx_audit_support
repository
Initial release
Author supporting evidence
Derived calculations
Source and taxonomy
Structure summary
Author supporting evidence
1
0
2015-02-11
1
1
2017-09-27
1
2
2019-12-25
_entity_src_gen.pdbx_alt_source_flag
_pdbx_audit_support.funding_organization
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_oper_list.symmetry_operation
_struct_keywords.text
_pdbx_audit_support.funding_organization
United States
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
GM094585
Y
RCSB
Y
RCSB
2015-01-27
REL
REL
PO4
PHOSPHATE ION
HOH
water
PO4
501
2
PO4
PO4
501
A
PO4
504
2
PO4
PO4
502
A
PO4
502
2
PO4
PO4
301
B
PO4
503
2
PO4
PO4
301
C
HOH
142
3
HOH
HOH
601
A
HOH
27
3
HOH
HOH
602
A
HOH
13
3
HOH
HOH
603
A
HOH
82
3
HOH
HOH
604
A
HOH
62
3
HOH
HOH
605
A
HOH
73
3
HOH
HOH
606
A
HOH
50
3
HOH
HOH
607
A
HOH
42
3
HOH
HOH
608
A
HOH
143
3
HOH
HOH
609
A
HOH
152
3
HOH
HOH
610
A
HOH
145
3
HOH
HOH
611
A
HOH
115
3
HOH
HOH
612
A
HOH
139
3
HOH
HOH
613
A
HOH
4
3
HOH
HOH
614
A
HOH
5
3
HOH
HOH
615
A
HOH
7
3
HOH
HOH
616
A
HOH
9
3
HOH
HOH
617
A
HOH
16
3
HOH
HOH
618
A
HOH
19
3
HOH
HOH
619
A
HOH
24
3
HOH
HOH
620
A
HOH
26
3
HOH
HOH
621
A
HOH
28
3
HOH
HOH
622
A
HOH
40
3
HOH
HOH
623
A
HOH
49
3
HOH
HOH
624
A
HOH
53
3
HOH
HOH
625
A
HOH
55
3
HOH
HOH
626
A
HOH
58
3
HOH
HOH
627
A
HOH
60
3
HOH
HOH
628
A
HOH
68
3
HOH
HOH
629
A
HOH
69
3
HOH
HOH
630
A
HOH
76
3
HOH
HOH
631
A
HOH
80
3
HOH
HOH
632
A
HOH
85
3
HOH
HOH
633
A
HOH
90
3
HOH
HOH
634
A
HOH
94
3
HOH
HOH
635
A
HOH
97
3
HOH
HOH
636
A
HOH
99
3
HOH
HOH
637
A
HOH
113
3
HOH
HOH
638
A
HOH
116
3
HOH
HOH
639
A
HOH
117
3
HOH
HOH
640
A
HOH
121
3
HOH
HOH
641
A
HOH
122
3
HOH
HOH
642
A
HOH
123
3
HOH
HOH
643
A
HOH
128
3
HOH
HOH
644
A
HOH
130
3
HOH
HOH
645
A
HOH
131
3
HOH
HOH
646
A
HOH
135
3
HOH
HOH
647
A
HOH
146
3
HOH
HOH
648
A
HOH
147
3
HOH
HOH
649
A
HOH
153
3
HOH
HOH
650
A
HOH
156
3
HOH
HOH
651
A
HOH
168
3
HOH
HOH
652
A
HOH
169
3
HOH
HOH
653
A
HOH
170
3
HOH
HOH
654
A
HOH
171
3
HOH
HOH
655
A
HOH
172
3
HOH
HOH
656
A
HOH
173
3
HOH
HOH
657
A
HOH
112
3
HOH
HOH
401
B
HOH
165
3
HOH
HOH
402
B
HOH
44
3
HOH
HOH
403
B
HOH
132
3
HOH
HOH
404
B
HOH
46
3
HOH
HOH
405
B
HOH
87
3
HOH
HOH
406
B
HOH
57
3
HOH
HOH
407
B
HOH
108
3
HOH
HOH
408
B
HOH
41
3
HOH
HOH
409
B
HOH
103
3
HOH
HOH
410
B
HOH
91
3
HOH
HOH
411
B
HOH
2
3
HOH
HOH
412
B
HOH
6
3
HOH
HOH
413
B
HOH
10
3
HOH
HOH
414
B
HOH
14
3
HOH
HOH
415
B
HOH
15
3
HOH
HOH
416
B
HOH
17
3
HOH
HOH
417
B
HOH
18
3
HOH
HOH
418
B
HOH
20
3
HOH
HOH
419
B
HOH
31
3
HOH
HOH
420
B
HOH
36
3
HOH
HOH
421
B
HOH
37
3
HOH
HOH
422
B
HOH
38
3
HOH
HOH
423
B
HOH
43
3
HOH
HOH
424
B
HOH
45
3
HOH
HOH
425
B
HOH
47
3
HOH
HOH
426
B
HOH
52
3
HOH
HOH
427
B
HOH
61
3
HOH
HOH
428
B
HOH
63
3
HOH
HOH
429
B
HOH
65
3
HOH
HOH
430
B
HOH
66
3
HOH
HOH
431
B
HOH
72
3
HOH
HOH
432
B
HOH
75
3
HOH
HOH
433
B
HOH
77
3
HOH
HOH
434
B
HOH
79
3
HOH
HOH
435
B
HOH
84
3
HOH
HOH
436
B
HOH
93
3
HOH
HOH
437
B
HOH
95
3
HOH
HOH
438
B
HOH
98
3
HOH
HOH
439
B
HOH
105
3
HOH
HOH
440
B
HOH
107
3
HOH
HOH
441
B
HOH
109
3
HOH
HOH
442
B
HOH
110
3
HOH
HOH
443
B
HOH
111
3
HOH
HOH
444
B
HOH
120
3
HOH
HOH
445
B
HOH
124
3
HOH
HOH
446
B
HOH
125
3
HOH
HOH
447
B
HOH
127
3
HOH
HOH
448
B
HOH
129
3
HOH
HOH
449
B
HOH
133
3
HOH
HOH
450
B
HOH
134
3
HOH
HOH
451
B
HOH
149
3
HOH
HOH
452
B
HOH
150
3
HOH
HOH
453
B
HOH
154
3
HOH
HOH
454
B
HOH
155
3
HOH
HOH
455
B
HOH
157
3
HOH
HOH
456
B
HOH
158
3
HOH
HOH
457
B
HOH
159
3
HOH
HOH
458
B
HOH
160
3
HOH
HOH
459
B
HOH
161
3
HOH
HOH
460
B
HOH
166
3
HOH
HOH
461
B
HOH
141
3
HOH
HOH
401
C
HOH
33
3
HOH
HOH
402
C
HOH
167
3
HOH
HOH
403
C
HOH
126
3
HOH
HOH
404
C
HOH
119
3
HOH
HOH
405
C
HOH
64
3
HOH
HOH
406
C
HOH
54
3
HOH
HOH
407
C
HOH
114
3
HOH
HOH
408
C
HOH
104
3
HOH
HOH
409
C
HOH
140
3
HOH
HOH
410
C
HOH
89
3
HOH
HOH
411
C
HOH
144
3
HOH
HOH
412
C
HOH
92
3
HOH
HOH
413
C
HOH
1
3
HOH
HOH
414
C
HOH
3
3
HOH
HOH
415
C
HOH
8
3
HOH
HOH
416
C
HOH
11
3
HOH
HOH
417
C
HOH
12
3
HOH
HOH
418
C
HOH
21
3
HOH
HOH
419
C
HOH
22
3
HOH
HOH
420
C
HOH
23
3
HOH
HOH
421
C
HOH
25
3
HOH
HOH
422
C
HOH
29
3
HOH
HOH
423
C
HOH
30
3
HOH
HOH
424
C
HOH
32
3
HOH
HOH
425
C
HOH
34
3
HOH
HOH
426
C
HOH
35
3
HOH
HOH
427
C
HOH
39
3
HOH
HOH
428
C
HOH
48
3
HOH
HOH
429
C
HOH
51
3
HOH
HOH
430
C
HOH
56
3
HOH
HOH
431
C
HOH
59
3
HOH
HOH
432
C
HOH
67
3
HOH
HOH
433
C
HOH
70
3
HOH
HOH
434
C
HOH
71
3
HOH
HOH
435
C
HOH
74
3
HOH
HOH
436
C
HOH
78
3
HOH
HOH
437
C
HOH
81
3
HOH
HOH
438
C
HOH
83
3
HOH
HOH
439
C
HOH
86
3
HOH
HOH
440
C
HOH
88
3
HOH
HOH
441
C
HOH
96
3
HOH
HOH
442
C
HOH
100
3
HOH
HOH
443
C
HOH
101
3
HOH
HOH
444
C
HOH
102
3
HOH
HOH
445
C
HOH
106
3
HOH
HOH
446
C
HOH
118
3
HOH
HOH
447
C
HOH
136
3
HOH
HOH
448
C
HOH
137
3
HOH
HOH
449
C
HOH
138
3
HOH
HOH
450
C
HOH
148
3
HOH
HOH
451
C
HOH
151
3
HOH
HOH
452
C
HOH
162
3
HOH
HOH
453
C
HOH
163
3
HOH
HOH
454
C
HOH
164
3
HOH
HOH
455
C
HOH
174
3
HOH
HOH
456
C
n
1
37
A
n
2
38
A
n
3
39
A
n
4
40
A
n
5
41
A
n
6
42
A
THR
43
n
7
THR
43
A
PRO
44
n
8
PRO
44
A
VAL
45
n
9
VAL
45
A
GLU
46
n
10
GLU
46
A
VAL
47
n
11
VAL
47
A
ALA
48
n
12
ALA
48
A
GLN
49
n
13
GLN
49
A
VAL
50
n
14
VAL
50
A
GLU
51
n
15
GLU
51
A
PRO
52
n
16
PRO
52
A
ALA
53
n
17
ALA
53
A
ALA
54
n
18
ALA
54
A
GLY
55
n
19
GLY
55
A
ALA
56
n
20
ALA
56
A
VAL
57
n
21
VAL
57
A
VAL
58
n
22
VAL
58
A
GLY
59
n
23
GLY
59
A
VAL
60
n
24
VAL
60
A
ALA
61
n
25
ALA
61
A
HIS
62
n
26
HIS
62
A
PRO
63
n
27
PRO
63
A
VAL
64
n
28
VAL
64
A
THR
65
n
29
THR
65
A
VAL
66
n
30
VAL
66
A
ARG
67
n
31
ARG
67
A
PHE
68
n
32
PHE
68
A
ALA
69
n
33
ALA
69
A
GLU
70
n
34
GLU
70
A
PRO
71
n
35
PRO
71
A
VAL
72
n
36
VAL
72
A
THR
73
n
37
THR
73
A
ASP
74
n
38
ASP
74
A
ARG
75
n
39
ARG
75
A
ARG
76
n
40
ARG
76
A
SER
77
n
41
SER
77
A
ALA
78
n
42
ALA
78
A
GLU
79
n
43
GLU
79
A
ARG
80
n
44
ARG
80
A
SER
81
n
45
SER
81
A
LEU
82
n
46
LEU
82
A
ARG
83
n
47
ARG
83
A
ILE
84
n
48
ILE
84
A
ALA
85
n
49
ALA
85
A
SER
86
n
50
SER
86
A
THR
87
n
51
THR
87
A
ASP
88
n
52
ASP
88
A
THR
89
n
53
THR
89
A
SER
90
n
54
SER
90
A
ALA
91
n
55
ALA
91
A
GLY
92
n
56
GLY
92
A
ARG
93
n
57
ARG
93
A
PHE
94
n
58
PHE
94
A
ARG
95
n
59
ARG
95
A
TRP
96
n
60
TRP
96
A
PRO
97
n
61
PRO
97
A
GLU
98
n
62
GLU
98
A
ALA
99
n
63
ALA
99
A
ALA
100
n
64
ALA
100
A
VAL
101
n
65
VAL
101
A
MSE
102
n
66
MSE
102
A
GLU
103
n
67
GLU
103
A
TRP
104
n
68
TRP
104
A
THR
105
n
69
THR
105
A
PRO
106
n
70
PRO
106
A
ASP
107
n
71
ASP
107
A
GLU
108
n
72
GLU
108
A
PHE
109
n
73
PHE
109
A
TRP
110
n
74
TRP
110
A
PRO
111
n
75
PRO
111
A
ALA
112
n
76
ALA
112
A
HIS
113
n
77
HIS
113
A
SER
114
n
78
SER
114
A
THR
115
n
79
THR
115
A
ILE
116
n
80
ILE
116
A
SER
117
n
81
SER
117
A
LEU
118
n
82
LEU
118
A
SER
119
n
83
SER
119
A
VAL
120
n
84
VAL
120
A
GLY
121
n
85
GLY
121
A
GLY
122
n
86
GLY
122
A
VAL
123
n
87
VAL
123
A
LYS
124
n
88
LYS
124
A
THR
125
n
89
THR
125
A
SER
126
n
90
SER
126
A
PHE
127
n
91
PHE
127
A
ASN
128
n
92
ASN
128
A
THR
129
n
93
THR
129
A
GLY
130
n
94
GLY
130
A
ALA
131
n
95
ALA
131
A
GLU
132
n
96
GLU
132
A
VAL
133
n
97
VAL
133
A
LEU
134
n
98
LEU
134
A
GLY
135
n
99
GLY
135
A
VAL
136
n
100
VAL
136
A
ALA
137
n
101
ALA
137
A
ASP
138
n
102
ASP
138
A
ILE
139
n
103
ILE
139
A
ASP
140
n
104
ASP
140
A
ALA
141
n
105
ALA
141
A
HIS
142
n
106
HIS
142
A
THR
143
n
107
THR
143
A
PHE
144
n
108
PHE
144
A
THR
145
n
109
THR
145
A
VAL
146
n
110
VAL
146
A
SER
147
n
111
SER
147
A
VAL
148
n
112
VAL
148
A
ASP
149
n
113
ASP
149
A
GLY
150
n
114
GLY
150
A
GLU
151
n
115
GLU
151
A
VAL
152
n
116
VAL
152
A
LEU
153
n
117
LEU
153
A
ARG
154
n
118
ARG
154
A
LYS
155
n
119
LYS
155
A
MSE
156
n
120
MSE
156
A
PRO
157
n
121
PRO
157
A
ALA
158
n
122
ALA
158
A
SER
159
n
123
SER
159
A
MSE
160
n
124
MSE
160
A
GLY
161
n
125
GLY
161
A
LYS
162
n
126
LYS
162
A
PRO
163
n
127
PRO
163
A
LYS
164
n
128
LYS
164
A
PHE
165
n
129
PHE
165
A
PRO
166
n
130
PRO
166
A
THR
167
n
131
THR
167
A
PRO
168
n
132
PRO
168
A
ARG
169
n
133
ARG
169
A
GLY
170
n
134
GLY
170
A
THR
171
n
135
THR
171
A
PHE
172
n
136
PHE
172
A
THR
173
n
137
THR
173
A
ALA
174
n
138
ALA
174
A
LEU
175
n
139
LEU
175
A
ALA
176
n
140
ALA
176
A
LYS
177
n
141
LYS
177
A
GLU
178
n
142
GLU
178
A
PRO
179
n
143
PRO
179
A
VAL
180
n
144
VAL
180
A
VAL
181
n
145
VAL
181
A
VAL
182
n
146
VAL
182
A
MSE
183
n
147
MSE
183
A
ASP
184
n
148
ASP
184
A
SER
185
n
149
SER
185
A
ARG
186
n
150
ARG
186
A
THR
187
n
151
THR
187
A
ILE
188
n
152
ILE
188
A
GLY
189
n
153
GLY
189
A
ILE
190
n
154
ILE
190
A
PRO
191
n
155
PRO
191
A
LEU
192
n
156
LEU
192
A
SER
193
n
157
SER
193
A
ASP
194
n
158
ASP
194
A
PRO
195
n
159
PRO
195
A
GLU
196
n
160
GLU
196
A
GLY
197
n
161
GLY
197
A
TYR
198
n
162
TYR
198
A
LYS
199
n
163
LYS
199
A
LEU
200
n
164
LEU
200
A
THR
201
n
165
THR
201
A
VAL
202
n
166
VAL
202
A
ASN
203
n
167
ASN
203
A
HIS
204
n
168
HIS
204
A
ALA
205
n
169
ALA
205
A
VAL
206
n
170
VAL
206
A
ARG
207
n
171
ARG
207
A
VAL
208
n
172
VAL
208
A
THR
209
n
173
THR
209
A
TRP
210
n
174
TRP
210
A
GLY
211
n
175
GLY
211
A
GLY
212
n
176
GLY
212
A
VAL
213
n
177
VAL
213
A
TYR
214
n
178
TYR
214
A
VAL
215
n
179
VAL
215
A
HIS
216
n
180
HIS
216
A
SER
217
n
181
SER
217
A
ALA
218
n
182
ALA
218
A
PRO
219
n
183
PRO
219
A
TRP
220
n
184
TRP
220
A
SER
221
n
185
SER
221
A
VAL
222
n
186
VAL
222
A
GLY
223
n
187
GLY
223
A
SER
224
n
188
SER
224
A
GLN
225
n
189
GLN
225
A
GLY
226
n
190
GLY
226
A
TYR
227
n
191
TYR
227
A
ALA
228
n
192
ALA
228
A
ASN
229
n
193
ASN
229
A
VAL
230
n
194
VAL
230
A
SER
231
n
195
SER
231
A
HIS
232
n
196
HIS
232
A
GLY
233
n
197
GLY
233
A
CYS
234
n
198
CYS
234
A
ILE
235
n
199
ILE
235
A
ASN
236
n
200
ASN
236
A
LEU
237
n
201
LEU
237
A
SER
238
n
202
SER
238
A
PRO
239
n
203
PRO
239
A
ASP
240
n
204
ASP
240
A
ASN
241
n
205
ASN
241
A
ALA
242
n
206
ALA
242
A
ALA
243
n
207
ALA
243
A
TRP
244
n
208
TRP
244
A
TYR
245
n
209
TYR
245
A
TYR
246
n
210
TYR
246
A
ASP
247
n
211
ASP
247
A
MSE
248
n
212
MSE
248
A
VAL
249
n
213
VAL
249
A
SER
250
n
214
SER
250
A
VAL
251
n
215
VAL
251
A
GLY
252
n
216
GLY
252
A
ASP
253
n
217
ASP
253
A
PRO
254
n
218
PRO
254
A
ILE
255
n
219
ILE
255
A
ILE
256
n
220
ILE
256
A
VAL
257
n
221
VAL
257
A
GLN
258
n
222
GLN
258
A
ALA
259
n
223
ALA
259
A
n
1
37
B
n
2
38
B
n
3
39
B
n
4
40
B
n
5
41
B
n
6
42
B
THR
43
n
7
THR
43
B
PRO
44
n
8
PRO
44
B
VAL
45
n
9
VAL
45
B
GLU
46
n
10
GLU
46
B
VAL
47
n
11
VAL
47
B
ALA
48
n
12
ALA
48
B
GLN
49
n
13
GLN
49
B
VAL
50
n
14
VAL
50
B
GLU
51
n
15
GLU
51
B
PRO
52
n
16
PRO
52
B
ALA
53
n
17
ALA
53
B
ALA
54
n
18
ALA
54
B
GLY
55
n
19
GLY
55
B
ALA
56
n
20
ALA
56
B
VAL
57
n
21
VAL
57
B
VAL
58
n
22
VAL
58
B
GLY
59
n
23
GLY
59
B
VAL
60
n
24
VAL
60
B
ALA
61
n
25
ALA
61
B
HIS
62
n
26
HIS
62
B
PRO
63
n
27
PRO
63
B
VAL
64
n
28
VAL
64
B
THR
65
n
29
THR
65
B
VAL
66
n
30
VAL
66
B
ARG
67
n
31
ARG
67
B
PHE
68
n
32
PHE
68
B
ALA
69
n
33
ALA
69
B
GLU
70
n
34
GLU
70
B
PRO
71
n
35
PRO
71
B
VAL
72
n
36
VAL
72
B
THR
73
n
37
THR
73
B
ASP
74
n
38
ASP
74
B
ARG
75
n
39
ARG
75
B
ARG
76
n
40
ARG
76
B
SER
77
n
41
SER
77
B
ALA
78
n
42
ALA
78
B
GLU
79
n
43
GLU
79
B
ARG
80
n
44
ARG
80
B
SER
81
n
45
SER
81
B
LEU
82
n
46
LEU
82
B
ARG
83
n
47
ARG
83
B
ILE
84
n
48
ILE
84
B
ALA
85
n
49
ALA
85
B
SER
86
n
50
SER
86
B
THR
87
n
51
THR
87
B
ASP
88
n
52
ASP
88
B
THR
89
n
53
THR
89
B
SER
90
n
54
SER
90
B
ALA
91
n
55
ALA
91
B
GLY
92
n
56
GLY
92
B
ARG
93
n
57
ARG
93
B
PHE
94
n
58
PHE
94
B
ARG
95
n
59
ARG
95
B
TRP
96
n
60
TRP
96
B
PRO
97
n
61
PRO
97
B
GLU
98
n
62
GLU
98
B
ALA
99
n
63
ALA
99
B
ALA
100
n
64
ALA
100
B
VAL
101
n
65
VAL
101
B
MSE
102
n
66
MSE
102
B
GLU
103
n
67
GLU
103
B
TRP
104
n
68
TRP
104
B
THR
105
n
69
THR
105
B
PRO
106
n
70
PRO
106
B
ASP
107
n
71
ASP
107
B
GLU
108
n
72
GLU
108
B
PHE
109
n
73
PHE
109
B
TRP
110
n
74
TRP
110
B
PRO
111
n
75
PRO
111
B
ALA
112
n
76
ALA
112
B
HIS
113
n
77
HIS
113
B
SER
114
n
78
SER
114
B
THR
115
n
79
THR
115
B
ILE
116
n
80
ILE
116
B
SER
117
n
81
SER
117
B
LEU
118
n
82
LEU
118
B
SER
119
n
83
SER
119
B
VAL
120
n
84
VAL
120
B
GLY
121
n
85
GLY
121
B
GLY
122
n
86
GLY
122
B
VAL
123
n
87
VAL
123
B
LYS
124
n
88
LYS
124
B
THR
125
n
89
THR
125
B
SER
126
n
90
SER
126
B
PHE
127
n
91
PHE
127
B
ASN
128
n
92
ASN
128
B
THR
129
n
93
THR
129
B
GLY
130
n
94
GLY
130
B
ALA
131
n
95
ALA
131
B
GLU
132
n
96
GLU
132
B
VAL
133
n
97
VAL
133
B
LEU
134
n
98
LEU
134
B
GLY
135
n
99
GLY
135
B
VAL
136
n
100
VAL
136
B
ALA
137
n
101
ALA
137
B
ASP
138
n
102
ASP
138
B
ILE
139
n
103
ILE
139
B
ASP
140
n
104
ASP
140
B
ALA
141
n
105
ALA
141
B
HIS
142
n
106
HIS
142
B
THR
143
n
107
THR
143
B
PHE
144
n
108
PHE
144
B
THR
145
n
109
THR
145
B
VAL
146
n
110
VAL
146
B
SER
147
n
111
SER
147
B
VAL
148
n
112
VAL
148
B
ASP
149
n
113
ASP
149
B
GLY
150
n
114
GLY
150
B
GLU
151
n
115
GLU
151
B
VAL
152
n
116
VAL
152
B
LEU
153
n
117
LEU
153
B
ARG
154
n
118
ARG
154
B
LYS
155
n
119
LYS
155
B
MSE
156
n
120
MSE
156
B
PRO
157
n
121
PRO
157
B
ALA
158
n
122
ALA
158
B
SER
159
n
123
SER
159
B
MSE
160
n
124
MSE
160
B
GLY
161
n
125
GLY
161
B
LYS
162
n
126
LYS
162
B
PRO
163
n
127
PRO
163
B
LYS
164
n
128
LYS
164
B
PHE
165
n
129
PHE
165
B
PRO
166
n
130
PRO
166
B
THR
167
n
131
THR
167
B
PRO
168
n
132
PRO
168
B
ARG
169
n
133
ARG
169
B
GLY
170
n
134
GLY
170
B
THR
171
n
135
THR
171
B
PHE
172
n
136
PHE
172
B
THR
173
n
137
THR
173
B
ALA
174
n
138
ALA
174
B
LEU
175
n
139
LEU
175
B
ALA
176
n
140
ALA
176
B
LYS
177
n
141
LYS
177
B
GLU
178
n
142
GLU
178
B
PRO
179
n
143
PRO
179
B
VAL
180
n
144
VAL
180
B
VAL
181
n
145
VAL
181
B
VAL
182
n
146
VAL
182
B
MSE
183
n
147
MSE
183
B
ASP
184
n
148
ASP
184
B
SER
185
n
149
SER
185
B
ARG
186
n
150
ARG
186
B
THR
187
n
151
THR
187
B
ILE
188
n
152
ILE
188
B
GLY
189
n
153
GLY
189
B
ILE
190
n
154
ILE
190
B
PRO
191
n
155
PRO
191
B
LEU
192
n
156
LEU
192
B
SER
193
n
157
SER
193
B
ASP
194
n
158
ASP
194
B
PRO
195
n
159
PRO
195
B
GLU
196
n
160
GLU
196
B
GLY
197
n
161
GLY
197
B
TYR
198
n
162
TYR
198
B
LYS
199
n
163
LYS
199
B
LEU
200
n
164
LEU
200
B
THR
201
n
165
THR
201
B
VAL
202
n
166
VAL
202
B
ASN
203
n
167
ASN
203
B
HIS
204
n
168
HIS
204
B
ALA
205
n
169
ALA
205
B
VAL
206
n
170
VAL
206
B
ARG
207
n
171
ARG
207
B
VAL
208
n
172
VAL
208
B
THR
209
n
173
THR
209
B
TRP
210
n
174
TRP
210
B
GLY
211
n
175
GLY
211
B
GLY
212
n
176
GLY
212
B
VAL
213
n
177
VAL
213
B
TYR
214
n
178
TYR
214
B
VAL
215
n
179
VAL
215
B
HIS
216
n
180
HIS
216
B
SER
217
n
181
SER
217
B
ALA
218
n
182
ALA
218
B
PRO
219
n
183
PRO
219
B
TRP
220
n
184
TRP
220
B
SER
221
n
185
SER
221
B
VAL
222
n
186
VAL
222
B
GLY
223
n
187
GLY
223
B
SER
224
n
188
SER
224
B
GLN
225
n
189
GLN
225
B
GLY
226
n
190
GLY
226
B
TYR
227
n
191
TYR
227
B
ALA
228
n
192
ALA
228
B
ASN
229
n
193
ASN
229
B
VAL
230
n
194
VAL
230
B
SER
231
n
195
SER
231
B
HIS
232
n
196
HIS
232
B
GLY
233
n
197
GLY
233
B
CYS
234
n
198
CYS
234
B
ILE
235
n
199
ILE
235
B
ASN
236
n
200
ASN
236
B
LEU
237
n
201
LEU
237
B
SER
238
n
202
SER
238
B
PRO
239
n
203
PRO
239
B
ASP
240
n
204
ASP
240
B
ASN
241
n
205
ASN
241
B
ALA
242
n
206
ALA
242
B
ALA
243
n
207
ALA
243
B
TRP
244
n
208
TRP
244
B
TYR
245
n
209
TYR
245
B
TYR
246
n
210
TYR
246
B
ASP
247
n
211
ASP
247
B
MSE
248
n
212
MSE
248
B
VAL
249
n
213
VAL
249
B
SER
250
n
214
SER
250
B
VAL
251
n
215
VAL
251
B
GLY
252
n
216
GLY
252
B
ASP
253
n
217
ASP
253
B
PRO
254
n
218
PRO
254
B
ILE
255
n
219
ILE
255
B
ILE
256
n
220
ILE
256
B
VAL
257
n
221
VAL
257
B
GLN
258
n
222
GLN
258
B
ALA
259
n
223
ALA
259
B
n
1
37
C
n
2
38
C
n
3
39
C
n
4
40
C
n
5
41
C
n
6
42
C
THR
43
n
7
THR
43
C
PRO
44
n
8
PRO
44
C
VAL
45
n
9
VAL
45
C
GLU
46
n
10
GLU
46
C
VAL
47
n
11
VAL
47
C
ALA
48
n
12
ALA
48
C
GLN
49
n
13
GLN
49
C
VAL
50
n
14
VAL
50
C
GLU
51
n
15
GLU
51
C
PRO
52
n
16
PRO
52
C
ALA
53
n
17
ALA
53
C
ALA
54
n
18
ALA
54
C
GLY
55
n
19
GLY
55
C
ALA
56
n
20
ALA
56
C
VAL
57
n
21
VAL
57
C
VAL
58
n
22
VAL
58
C
GLY
59
n
23
GLY
59
C
VAL
60
n
24
VAL
60
C
ALA
61
n
25
ALA
61
C
HIS
62
n
26
HIS
62
C
PRO
63
n
27
PRO
63
C
VAL
64
n
28
VAL
64
C
THR
65
n
29
THR
65
C
VAL
66
n
30
VAL
66
C
ARG
67
n
31
ARG
67
C
PHE
68
n
32
PHE
68
C
ALA
69
n
33
ALA
69
C
GLU
70
n
34
GLU
70
C
PRO
71
n
35
PRO
71
C
VAL
72
n
36
VAL
72
C
THR
73
n
37
THR
73
C
ASP
74
n
38
ASP
74
C
ARG
75
n
39
ARG
75
C
ARG
76
n
40
ARG
76
C
SER
77
n
41
SER
77
C
ALA
78
n
42
ALA
78
C
GLU
79
n
43
GLU
79
C
ARG
80
n
44
ARG
80
C
SER
81
n
45
SER
81
C
LEU
82
n
46
LEU
82
C
ARG
83
n
47
ARG
83
C
ILE
84
n
48
ILE
84
C
ALA
85
n
49
ALA
85
C
SER
86
n
50
SER
86
C
THR
87
n
51
THR
87
C
ASP
88
n
52
ASP
88
C
THR
89
n
53
THR
89
C
SER
90
n
54
SER
90
C
ALA
91
n
55
ALA
91
C
GLY
92
n
56
GLY
92
C
ARG
93
n
57
ARG
93
C
PHE
94
n
58
PHE
94
C
ARG
95
n
59
ARG
95
C
TRP
96
n
60
TRP
96
C
PRO
97
n
61
PRO
97
C
GLU
98
n
62
GLU
98
C
ALA
99
n
63
ALA
99
C
ALA
100
n
64
ALA
100
C
VAL
101
n
65
VAL
101
C
MSE
102
n
66
MSE
102
C
GLU
103
n
67
GLU
103
C
TRP
104
n
68
TRP
104
C
THR
105
n
69
THR
105
C
PRO
106
n
70
PRO
106
C
ASP
107
n
71
ASP
107
C
GLU
108
n
72
GLU
108
C
PHE
109
n
73
PHE
109
C
TRP
110
n
74
TRP
110
C
PRO
111
n
75
PRO
111
C
ALA
112
n
76
ALA
112
C
HIS
113
n
77
HIS
113
C
SER
114
n
78
SER
114
C
THR
115
n
79
THR
115
C
ILE
116
n
80
ILE
116
C
SER
117
n
81
SER
117
C
LEU
118
n
82
LEU
118
C
SER
119
n
83
SER
119
C
VAL
120
n
84
VAL
120
C
GLY
121
n
85
GLY
121
C
GLY
122
n
86
GLY
122
C
VAL
123
n
87
VAL
123
C
LYS
124
n
88
LYS
124
C
THR
125
n
89
THR
125
C
SER
126
n
90
SER
126
C
PHE
127
n
91
PHE
127
C
ASN
128
n
92
ASN
128
C
THR
129
n
93
THR
129
C
GLY
130
n
94
GLY
130
C
ALA
131
n
95
ALA
131
C
GLU
132
n
96
GLU
132
C
VAL
133
n
97
VAL
133
C
LEU
134
n
98
LEU
134
C
GLY
135
n
99
GLY
135
C
VAL
136
n
100
VAL
136
C
ALA
137
n
101
ALA
137
C
ASP
138
n
102
ASP
138
C
ILE
139
n
103
ILE
139
C
ASP
140
n
104
ASP
140
C
ALA
141
n
105
ALA
141
C
HIS
142
n
106
HIS
142
C
THR
143
n
107
THR
143
C
PHE
144
n
108
PHE
144
C
THR
145
n
109
THR
145
C
VAL
146
n
110
VAL
146
C
SER
147
n
111
SER
147
C
VAL
148
n
112
VAL
148
C
ASP
149
n
113
ASP
149
C
GLY
150
n
114
GLY
150
C
GLU
151
n
115
GLU
151
C
VAL
152
n
116
VAL
152
C
LEU
153
n
117
LEU
153
C
ARG
154
n
118
ARG
154
C
LYS
155
n
119
LYS
155
C
MSE
156
n
120
MSE
156
C
PRO
157
n
121
PRO
157
C
ALA
158
n
122
ALA
158
C
SER
159
n
123
SER
159
C
MSE
160
n
124
MSE
160
C
GLY
161
n
125
GLY
161
C
LYS
162
n
126
LYS
162
C
PRO
163
n
127
PRO
163
C
LYS
164
n
128
LYS
164
C
PHE
165
n
129
PHE
165
C
PRO
166
n
130
PRO
166
C
THR
167
n
131
THR
167
C
PRO
168
n
132
PRO
168
C
ARG
169
n
133
ARG
169
C
GLY
170
n
134
GLY
170
C
THR
171
n
135
THR
171
C
PHE
172
n
136
PHE
172
C
THR
173
n
137
THR
173
C
ALA
174
n
138
ALA
174
C
LEU
175
n
139
LEU
175
C
ALA
176
n
140
ALA
176
C
LYS
177
n
141
LYS
177
C
GLU
178
n
142
GLU
178
C
PRO
179
n
143
PRO
179
C
VAL
180
n
144
VAL
180
C
VAL
181
n
145
VAL
181
C
VAL
182
n
146
VAL
182
C
MSE
183
n
147
MSE
183
C
ASP
184
n
148
ASP
184
C
SER
185
n
149
SER
185
C
ARG
186
n
150
ARG
186
C
THR
187
n
151
THR
187
C
ILE
188
n
152
ILE
188
C
GLY
189
n
153
GLY
189
C
ILE
190
n
154
ILE
190
C
PRO
191
n
155
PRO
191
C
LEU
192
n
156
LEU
192
C
SER
193
n
157
SER
193
C
ASP
194
n
158
ASP
194
C
PRO
195
n
159
PRO
195
C
GLU
196
n
160
GLU
196
C
GLY
197
n
161
GLY
197
C
TYR
198
n
162
TYR
198
C
LYS
199
n
163
LYS
199
C
LEU
200
n
164
LEU
200
C
THR
201
n
165
THR
201
C
VAL
202
n
166
VAL
202
C
ASN
203
n
167
ASN
203
C
HIS
204
n
168
HIS
204
C
ALA
205
n
169
ALA
205
C
VAL
206
n
170
VAL
206
C
ARG
207
n
171
ARG
207
C
VAL
208
n
172
VAL
208
C
THR
209
n
173
THR
209
C
TRP
210
n
174
TRP
210
C
GLY
211
n
175
GLY
211
C
GLY
212
n
176
GLY
212
C
VAL
213
n
177
VAL
213
C
TYR
214
n
178
TYR
214
C
VAL
215
n
179
VAL
215
C
HIS
216
n
180
HIS
216
C
SER
217
n
181
SER
217
C
ALA
218
n
182
ALA
218
C
PRO
219
n
183
PRO
219
C
TRP
220
n
184
TRP
220
C
SER
221
n
185
SER
221
C
VAL
222
n
186
VAL
222
C
GLY
223
n
187
GLY
223
C
SER
224
n
188
SER
224
C
GLN
225
n
189
GLN
225
C
GLY
226
n
190
GLY
226
C
TYR
227
n
191
TYR
227
C
ALA
228
n
192
ALA
228
C
ASN
229
n
193
ASN
229
C
VAL
230
n
194
VAL
230
C
SER
231
n
195
SER
231
C
HIS
232
n
196
HIS
232
C
GLY
233
n
197
GLY
233
C
CYS
234
n
198
CYS
234
C
ILE
235
n
199
ILE
235
C
ASN
236
n
200
ASN
236
C
LEU
237
n
201
LEU
237
C
SER
238
n
202
SER
238
C
PRO
239
n
203
PRO
239
C
ASP
240
n
204
ASP
240
C
ASN
241
n
205
ASN
241
C
ALA
242
n
206
ALA
242
C
ALA
243
n
207
ALA
243
C
TRP
244
n
208
TRP
244
C
TYR
245
n
209
TYR
245
C
TYR
246
n
210
TYR
246
C
ASP
247
n
211
ASP
247
C
MSE
248
n
212
MSE
248
C
VAL
249
n
213
VAL
249
C
SER
250
n
214
SER
250
C
VAL
251
n
215
VAL
251
C
GLY
252
n
216
GLY
252
C
ASP
253
n
217
ASP
253
C
PRO
254
n
218
PRO
254
C
ILE
255
n
219
ILE
255
C
ILE
256
n
220
ILE
256
C
VAL
257
n
221
VAL
257
C
GLN
258
n
222
GLN
258
C
ALA
259
n
223
ALA
259
C
0.0595
0.0348
-0.0067
0.0333
-0.0237
0.0454
0.1165
-0.0440
0.2949
0.0613
0.0622
0.0937
-0.1624
0.0836
0.1648
0.5152
-0.5453
0.0901
0.1420
0.0568
0.4485
refined
60.3435
32.4914
28.3855
X-RAY DIFFRACTION
0.0569
-0.0094
0.1297
0.1261
-0.0273
0.3178
-0.0659
0.0633
0.1022
-0.2257
-0.1857
-0.0608
0.1062
0.0688
-0.2106
0.4219
-0.0997
0.0148
0.1305
0.0461
0.1740
refined
52.0262
12.4544
10.3624
X-RAY DIFFRACTION
0.0397
0.0320
0.0131
0.0585
-0.0547
0.1706
0.1013
-0.1097
0.2027
0.0178
0.0387
-0.2913
-0.0244
0.1595
0.1238
-0.1164
0.0411
0.0658
0.7213
-0.0372
0.4622
refined
81.4139
4.0010
63.3870
X-RAY DIFFRACTION
0.1577
0.0760
0.0172
0.1426
-0.1540
0.3143
-0.2259
0.1522
-0.0062
-0.1805
0.0001
-0.1118
0.1288
-0.0569
-0.1938
0.1090
-0.0599
0.0507
0.4603
0.0058
0.1684
refined
59.9255
1.2089
45.3731
X-RAY DIFFRACTION
0.0470
0.0058
-0.0487
0.0093
-0.0209
0.0715
0.0414
-0.0396
-0.0738
0.0390
0.1088
-0.2671
0.1218
0.0787
0.1662
0.5003
0.4382
0.0528
0.0866
-0.0639
0.4890
refined
68.9565
-30.1863
96.5497
X-RAY DIFFRACTION
0.1782
-0.0745
-0.0974
0.1199
0.0557
0.0769
-0.0793
0.2815
-0.1086
0.0485
-0.0527
-0.0329
0.0453
-0.1096
-0.1854
0.3653
0.2176
0.0608
0.2001
-0.0501
0.1756
refined
55.1873
-12.9874
83.6571
X-RAY DIFFRACTION
A
0
A
0
X-RAY DIFFRACTION
1
chain 'A' and (resid 43 through 128 )
A
0
A
0
X-RAY DIFFRACTION
2
chain 'A' and (resid 129 through 259 )
B
0
B
0
X-RAY DIFFRACTION
3
chain 'B' and (resid 43 through 128 )
B
0
B
0
X-RAY DIFFRACTION
4
chain 'B' and (resid 129 through 259 )
C
0
C
0
X-RAY DIFFRACTION
5
chain 'C' and (resid 43 through 106 )
C
0
C
0
X-RAY DIFFRACTION
6
chain 'C' and (resid 107 through 259 )
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
A
MSE
102
modified residue
A
MSE
66
MET
A
MSE
156
modified residue
A
MSE
120
MET
A
MSE
160
modified residue
A
MSE
124
MET
A
MSE
183
modified residue
A
MSE
147
MET
A
MSE
248
modified residue
A
MSE
212
MET
B
MSE
102
modified residue
B
MSE
66
MET
B
MSE
156
modified residue
B
MSE
120
MET
B
MSE
160
modified residue
B
MSE
124
MET
B
MSE
183
modified residue
B
MSE
147
MET
B
MSE
248
modified residue
B
MSE
212
MET
C
MSE
102
modified residue
C
MSE
66
MET
C
MSE
156
modified residue
C
MSE
120
MET
C
MSE
160
modified residue
C
MSE
124
MET
C
MSE
183
modified residue
C
MSE
147
MET
C
MSE
248
modified residue
C
MSE
212
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLN
49
A
N
GLN
13
A
O
ARG
67
A
O
ARG
31
A
N
VAL
66
A
N
VAL
30
A
O
MSE
102
A
O
MSE
66
A
O
GLU
103
A
O
GLU
67
A
N
ARG
95
A
N
ARG
59
A
N
VAL
58
A
N
VAL
22
A
O
ASN
128
A
O
ASN
92
A
O
PHE
127
A
O
PHE
91
A
N
ILE
116
A
N
ILE
80
A
O
SER
119
A
O
SER
83
A
N
ARG
83
A
N
ARG
47
A
O
MSE
156
A
O
MSE
120
A
N
PHE
144
A
N
PHE
108
A
O
THR
143
A
O
THR
107
A
N
ASP
138
A
N
ASP
102
A
N
GLY
135
A
N
GLY
99
A
O
ILE
256
A
O
ILE
220
A
O
ILE
255
A
O
ILE
219
A
N
PHE
172
A
N
PHE
136
A
N
VAL
181
A
N
VAL
145
A
O
VAL
202
A
O
VAL
166
A
N
VAL
206
A
N
VAL
170
A
O
VAL
215
A
O
VAL
179
A
N
TYR
214
A
N
TYR
178
A
O
ILE
235
A
O
ILE
199
B
N
GLN
49
B
N
GLN
13
B
O
ARG
67
B
O
ARG
31
B
N
VAL
66
B
N
VAL
30
B
O
MSE
102
B
O
MSE
66
B
O
GLU
103
B
O
GLU
67
B
N
ARG
95
B
N
ARG
59
B
N
VAL
58
B
N
VAL
22
B
O
ASN
128
B
O
ASN
92
B
O
PHE
127
B
O
PHE
91
B
N
ILE
116
B
N
ILE
80
B
O
SER
119
B
O
SER
83
B
N
ARG
83
B
N
ARG
47
B
O
MSE
156
B
O
MSE
120
B
N
PHE
144
B
N
PHE
108
B
O
THR
143
B
O
THR
107
B
N
ASP
138
B
N
ASP
102
B
N
GLY
135
B
N
GLY
99
B
O
ILE
256
B
O
ILE
220
B
O
ILE
255
B
O
ILE
219
B
N
PHE
172
B
N
PHE
136
B
N
GLU
178
B
N
GLU
142
B
O
ALA
205
B
O
ALA
169
B
N
VAL
206
B
N
VAL
170
B
O
VAL
215
B
O
VAL
179
B
N
TYR
214
B
N
TYR
178
B
O
ILE
235
B
O
ILE
199
C
N
GLN
49
C
N
GLN
13
C
O
ARG
67
C
O
ARG
31
C
N
VAL
66
C
N
VAL
30
C
O
MSE
102
C
O
MSE
66
C
O
GLU
103
C
O
GLU
67
C
N
ARG
95
C
N
ARG
59
C
N
VAL
58
C
N
VAL
22
C
O
ASN
128
C
O
ASN
92
C
O
PHE
127
C
O
PHE
91
C
N
ILE
116
C
N
ILE
80
C
O
SER
119
C
O
SER
83
C
N
ARG
83
C
N
ARG
47
C
O
MSE
156
C
O
MSE
120
C
N
PHE
144
C
N
PHE
108
C
O
THR
143
C
O
THR
107
C
N
ASP
138
C
N
ASP
102
C
N
GLY
135
C
N
GLY
99
C
O
ILE
256
C
O
ILE
220
C
O
ILE
255
C
O
ILE
219
C
N
PHE
172
C
N
PHE
136
C
N
VAL
181
C
N
VAL
145
C
O
VAL
202
C
O
VAL
166
C
N
VAL
206
C
N
VAL
170
C
O
VAL
215
C
O
VAL
179
C
N
TYR
214
C
N
TYR
178
C
O
ILE
235
C
O
ILE
199
1
A
SER
37
A
SER
1
1
Y
1
A
ASN
38
A
ASN
2
1
Y
1
A
ALA
39
A
ALA
3
1
Y
1
A
ALA
40
A
ALA
4
1
Y
1
A
VAL
41
A
VAL
5
1
Y
1
A
SER
42
A
SER
6
1
Y
1
B
SER
37
B
SER
1
1
Y
1
B
ASN
38
B
ASN
2
1
Y
1
B
ALA
39
B
ALA
3
1
Y
1
B
ALA
40
B
ALA
4
1
Y
1
B
VAL
41
B
VAL
5
1
Y
1
B
SER
42
B
SER
6
1
Y
1
C
SER
37
C
SER
1
1
Y
1
C
ASN
38
C
ASN
2
1
Y
1
C
ALA
39
C
ALA
3
1
Y
1
C
ALA
40
C
ALA
4
1
Y
1
C
VAL
41
C
VAL
5
1
Y
1
C
SER
42
C
SER
6
1
Y
1
A
THR
73
-90.55
-63.89
1
A
ALA
91
-88.48
49.79
1
A
ALA
174
-58.78
109.51
1
B
THR
73
-94.79
-63.82
1
B
ALA
91
-89.11
44.34
1
B
ALA
174
-58.11
109.16
1
B
TYR
227
-123.45
-54.91
1
C
THR
73
-93.54
-65.51
1
C
ALA
91
-88.31
32.99
1
C
TYR
227
-121.47
-54.73
135.810
53.9023
14.250
0.2380
0.1980
0.1999
2.6
42.2810
2410
45365
47775
5.0400
97.2700
0.3100
1
THROUGHOUT
1.350
SAD
24.6100
0.9000
1.1100
ML
FLAT BULK SOLVENT MODEL
2.6
42.2810
174
5093
82.20
46.37
20
0
4899
651
0.003
5184
0.725
7136
0.047
803
0.003
923
12.256
1842
0.2966
0.2650
2.6358
122
2126
2248
17
79.0000
0.3122
0.2563
2.6931
156
2570
2726
17
96.0000
0.2233
0.2308
2.7557
105
2644
2749
17
96.0000
0.2735
0.2411
2.8246
112
2658
2770
17
97.0000
0.3507
0.2569
2.9009
159
2650
2809
17
97.0000
0.3879
0.2824
2.9863
147
2620
2767
17
97.0000
0.2996
0.2727
3.0826
146
2666
2812
17
98.0000
0.3184
0.2280
3.1928
119
2722
2841
17
99.0000
0.2867
0.2302
3.3206
140
2674
2814
17
99.0000
0.2800
0.2159
3.4716
127
2728
2855
17
99.0000
0.2790
0.2095
3.6546
209
2640
2849
17
99.0000
0.2161
0.1880
3.8834
160
2722
2882
17
99.0000
0.2251
0.1666
4.1830
114
2751
2865
17
100.0000
0.1813
0.1473
4.6035
158
2725
2883
17
99.0000
0.1871
0.1464
5.2685
151
2761
2912
17
100.0000
0.2015
0.1853
6.6337
157
2801
2958
17
100.0000
0.1899
0.1997
42.2865
128
2907
3035
17
99.0000
52.680
2.600
50.000
4XVO
47865
47865
0
0
0.104
0.043
0.110
1.958
1
25.413
9.000
307944
6.400
98.400
0.969
2.600
2.640
1.94
2328
0.758
0.424
0.949
1
5.700
0
95.800
0.787
2.640
2.690
2272
0.837
0.330
0.856
0.975
1
6.200
0
96.000
0.586
2.690
2.740
2331
0.879
0.238
0.634
1.031
1
6.400
0
96.700
0.522
2.740
2.800
2338
0.922
0.213
0.565
1.049
1
6.500
0
96.700
0.483
2.800
2.860
2310
0.938
0.196
0.522
1.074
1
6.500
0
96.900
0.391
2.860
2.930
2343
0.954
0.160
0.423
1.174
1
6.400
0
97.500
0.355
2.930
3.000
2361
0.950
0.145
0.384
1.154
1
6.400
0
97.600
0.258
3.000
3.080
2362
0.973
0.105
0.279
1.291
1
6.500
0
97.700
0.203
3.080
3.170
2360
0.980
0.083
0.220
1.441
1
6.500
0
98.700
0.164
3.170
3.280
2395
0.991
0.067
0.178
1.580
1
6.400
0
99.000
0.148
3.280
3.390
2394
0.990
0.061
0.160
1.771
1
6.500
0
98.900
0.125
3.390
3.530
2392
0.992
0.051
0.135
1.933
1
6.500
0
98.900
0.105
3.530
3.690
2409
0.992
0.043
0.114
2.100
1
6.500
0
99.300
0.091
3.690
3.880
2430
0.995
0.037
0.098
2.314
1
6.600
0
99.200
0.079
3.880
4.130
2400
0.997
0.033
0.086
2.392
1
6.500
0
99.600
0.071
4.130
4.450
2441
0.996
0.029
0.077
2.754
1
6.500
0
99.600
0.068
4.450
4.890
2463
0.997
0.028
0.074
3.116
1
6.600
0
99.600
0.073
4.890
5.600
2440
0.997
0.030
0.079
3.501
1
6.600
0
100.000
0.070
5.600
7.050
2496
0.997
0.029
0.076
3.396
1
6.600
0
100.000
0.052
7.050
50.000
2600
0.994
0.022
0.056
3.428
1
6.300
0
99.700
data reduction
HKL-3000
refinement
PHENIX
(phenix.refine: 1.8.2_1309)
data extraction
PDB_EXTRACT
3.15
data scaling
HKL-3000
phasing
HKL-3000
L,D-transpeptidase
L,D-transpeptidase from Mycobacterium smegmatis
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
biological unit is the same as asymmetric unit
A
ASP
74
A
ASP
38
HELX_P
A
SER
81
A
SER
45
1
AA1
8
A
ARG
186
A
ARG
150
HELX_P
A
GLY
189
A
GLY
153
5
AA2
4
A
PRO
219
A
PRO
183
HELX_P
A
VAL
222
A
VAL
186
5
AA3
4
A
SER
238
A
SER
202
HELX_P
A
VAL
249
A
VAL
213
1
AA4
12
B
ASP
74
B
ASP
38
HELX_P
B
SER
81
B
SER
45
1
AA5
8
B
ARG
186
B
ARG
150
HELX_P
B
GLY
189
B
GLY
153
5
AA6
4
B
PRO
219
B
PRO
183
HELX_P
B
VAL
222
B
VAL
186
5
AA7
4
B
SER
238
B
SER
202
HELX_P
B
VAL
249
B
VAL
213
1
AA8
12
C
ASP
74
C
ASP
38
HELX_P
C
SER
81
C
SER
45
1
AA9
8
C
ASP
88
C
ASP
52
HELX_P
C
SER
90
C
SER
54
5
AB1
3
C
ARG
186
C
ARG
150
HELX_P
C
GLY
189
C
GLY
153
5
AB2
4
C
PRO
219
C
PRO
183
HELX_P
C
VAL
222
C
VAL
186
5
AB3
4
C
SER
238
C
SER
202
HELX_P
C
VAL
249
C
VAL
213
1
AB4
12
covale
1.328
both
A
VAL
101
A
C
VAL
65
1_555
A
MSE
102
A
N
MSE
66
1_555
covale
1.329
both
A
MSE
102
A
C
MSE
66
1_555
A
GLU
103
A
N
GLU
67
1_555
covale
1.326
both
A
LYS
155
A
C
LYS
119
1_555
A
MSE
156
A
N
MSE
120
1_555
covale
1.339
both
A
MSE
156
A
C
MSE
120
1_555
A
PRO
157
A
N
PRO
121
1_555
covale
1.330
both
A
SER
159
A
C
SER
123
1_555
A
MSE
160
A
N
MSE
124
1_555
covale
1.329
both
A
MSE
160
A
C
MSE
124
1_555
A
GLY
161
A
N
GLY
125
1_555
covale
1.330
both
A
VAL
182
A
C
VAL
146
1_555
A
MSE
183
A
N
MSE
147
1_555
covale
1.330
both
A
MSE
183
A
C
MSE
147
1_555
A
ASP
184
A
N
ASP
148
1_555
covale
1.329
both
A
ASP
247
A
C
ASP
211
1_555
A
MSE
248
A
N
MSE
212
1_555
covale
1.329
both
A
MSE
248
A
C
MSE
212
1_555
A
VAL
249
A
N
VAL
213
1_555
covale
1.331
both
B
VAL
101
B
C
VAL
65
1_555
B
MSE
102
B
N
MSE
66
1_555
covale
1.328
both
B
MSE
102
B
C
MSE
66
1_555
B
GLU
103
B
N
GLU
67
1_555
covale
1.328
both
B
LYS
155
B
C
LYS
119
1_555
B
MSE
156
B
N
MSE
120
1_555
covale
1.339
both
B
MSE
156
B
C
MSE
120
1_555
B
PRO
157
B
N
PRO
121
1_555
covale
1.329
both
B
SER
159
B
C
SER
123
1_555
B
MSE
160
B
N
MSE
124
1_555
covale
1.329
both
B
MSE
160
B
C
MSE
124
1_555
B
GLY
161
B
N
GLY
125
1_555
covale
1.330
both
B
VAL
182
B
C
VAL
146
1_555
B
MSE
183
B
N
MSE
147
1_555
covale
1.330
both
B
MSE
183
B
C
MSE
147
1_555
B
ASP
184
B
N
ASP
148
1_555
covale
1.329
both
B
ASP
247
B
C
ASP
211
1_555
B
MSE
248
B
N
MSE
212
1_555
covale
1.331
both
B
MSE
248
B
C
MSE
212
1_555
B
VAL
249
B
N
VAL
213
1_555
covale
1.332
both
C
VAL
101
C
C
VAL
65
1_555
C
MSE
102
C
N
MSE
66
1_555
covale
1.329
both
C
MSE
102
C
C
MSE
66
1_555
C
GLU
103
C
N
GLU
67
1_555
covale
1.327
both
C
LYS
155
C
C
LYS
119
1_555
C
MSE
156
C
N
MSE
120
1_555
covale
1.340
both
C
MSE
156
C
C
MSE
120
1_555
C
PRO
157
C
N
PRO
121
1_555
covale
1.329
both
C
SER
159
C
C
SER
123
1_555
C
MSE
160
C
N
MSE
124
1_555
covale
1.329
both
C
MSE
160
C
C
MSE
124
1_555
C
GLY
161
C
N
GLY
125
1_555
covale
1.329
both
C
VAL
182
C
C
VAL
146
1_555
C
MSE
183
C
N
MSE
147
1_555
covale
1.331
both
C
MSE
183
C
C
MSE
147
1_555
C
ASP
184
C
N
ASP
148
1_555
covale
1.330
both
C
ASP
247
C
C
ASP
211
1_555
C
MSE
248
C
N
MSE
212
1_555
covale
1.331
both
C
MSE
248
C
C
MSE
212
1_555
C
VAL
249
C
N
VAL
213
1_555
TRANSFERASE
L, D-transpeptidase, Mycobacterium, Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, TRANSFERASE
A
GLU
51
A
GLU
15
1
A
PRO
52
A
PRO
16
1.14
B
GLU
51
B
GLU
15
1
B
PRO
52
B
PRO
16
0.41
C
GLU
51
C
GLU
15
1
C
PRO
52
C
PRO
16
1.20
I7G323_MYCS2
UNP
1
71
I7G323
AVSTPVEVAQVEPAAGAVVGVAHPVTVRFAEPVTDRRSAERSLRIASTDTSAGRFRWPEAAVMEWTPDEFWPAHSTISLS
VGGVKTSFNTGAEVLGVADIDAHTFTVSVDGEVLRKMPASMGKPKFPTPRGTFTALAKEPVVVMDSRTIGIPLSDPEGYK
LTVNHAVRVTWGGVYVHSAPWSVGSQGYANVSHGCINLSPDNAAWYYDMVSVGDPIIVQA
71
290
4XVO
40
259
I7G323
A
1
4
223
71
290
4XVO
40
259
I7G323
B
1
4
223
71
290
4XVO
40
259
I7G323
C
1
4
223
1
expression tag
SER
37
4XVO
A
I7G323
UNP
1
1
expression tag
ASN
38
4XVO
A
I7G323
UNP
2
1
expression tag
ALA
39
4XVO
A
I7G323
UNP
3
2
expression tag
SER
37
4XVO
B
I7G323
UNP
1
2
expression tag
ASN
38
4XVO
B
I7G323
UNP
2
2
expression tag
ALA
39
4XVO
B
I7G323
UNP
3
3
expression tag
SER
37
4XVO
C
I7G323
UNP
1
3
expression tag
ASN
38
4XVO
C
I7G323
UNP
2
3
expression tag
ALA
39
4XVO
C
I7G323
UNP
3
4
4
5
4
4
4
5
4
4
4
5
4
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
A
VAL
47
A
VAL
11
A
GLU
51
A
GLU
15
A
VAL
64
A
VAL
28
A
PHE
68
A
PHE
32
A
VAL
101
A
VAL
65
A
PRO
106
A
PRO
70
A
GLY
92
A
GLY
56
A
ARG
95
A
ARG
59
A
VAL
57
A
VAL
21
A
VAL
58
A
VAL
22
A
LYS
124
A
LYS
88
A
THR
129
A
THR
93
A
THR
115
A
THR
79
A
VAL
120
A
VAL
84
A
LEU
82
A
LEU
46
A
ILE
84
A
ILE
48
A
GLU
151
A
GLU
115
A
PRO
157
A
PRO
121
A
THR
143
A
THR
107
A
VAL
148
A
VAL
112
A
VAL
133
A
VAL
97
A
ASP
138
A
ASP
102
A
PRO
254
A
PRO
218
A
GLN
258
A
GLN
222
A
GLY
170
A
GLY
134
A
THR
173
A
THR
137
A
ALA
176
A
ALA
140
A
ASP
184
A
ASP
148
A
LYS
199
A
LYS
163
A
ARG
207
A
ARG
171
A
TYR
214
A
TYR
178
A
SER
217
A
SER
181
A
ILE
235
A
ILE
199
A
LEU
237
A
LEU
201
B
VAL
47
B
VAL
11
B
GLU
51
B
GLU
15
B
VAL
64
B
VAL
28
B
PHE
68
B
PHE
32
B
VAL
101
B
VAL
65
B
PRO
106
B
PRO
70
B
GLY
92
B
GLY
56
B
ARG
95
B
ARG
59
B
VAL
57
B
VAL
21
B
VAL
58
B
VAL
22
B
VAL
123
B
VAL
87
B
THR
129
B
THR
93
B
THR
115
B
THR
79
B
VAL
120
B
VAL
84
B
LEU
82
B
LEU
46
B
ILE
84
B
ILE
48
B
GLU
151
B
GLU
115
B
PRO
157
B
PRO
121
B
THR
143
B
THR
107
B
VAL
148
B
VAL
112
B
VAL
133
B
VAL
97
B
ASP
138
B
ASP
102
B
PRO
254
B
PRO
218
B
GLN
258
B
GLN
222
B
GLY
170
B
GLY
134
B
THR
173
B
THR
137
B
ALA
176
B
ALA
140
B
ASP
184
B
ASP
148
B
LYS
199
B
LYS
163
B
ARG
207
B
ARG
171
B
TYR
214
B
TYR
178
B
SER
217
B
SER
181
B
ILE
235
B
ILE
199
B
LEU
237
B
LEU
201
C
VAL
47
C
VAL
11
C
GLU
51
C
GLU
15
C
VAL
64
C
VAL
28
C
PHE
68
C
PHE
32
C
VAL
101
C
VAL
65
C
PRO
106
C
PRO
70
C
GLY
92
C
GLY
56
C
GLU
98
C
GLU
62
C
VAL
57
C
VAL
21
C
VAL
58
C
VAL
22
C
VAL
123
C
VAL
87
C
THR
129
C
THR
93
C
THR
115
C
THR
79
C
VAL
120
C
VAL
84
C
LEU
82
C
LEU
46
C
ILE
84
C
ILE
48
C
GLU
151
C
GLU
115
C
PRO
157
C
PRO
121
C
THR
143
C
THR
107
C
VAL
148
C
VAL
112
C
VAL
133
C
VAL
97
C
ASP
138
C
ASP
102
C
PRO
254
C
PRO
218
C
GLN
258
C
GLN
222
C
GLY
170
C
GLY
134
C
THR
173
C
THR
137
C
ALA
176
C
ALA
140
C
ASP
184
C
ASP
148
C
LYS
199
C
LYS
163
C
ARG
207
C
ARG
171
C
TYR
214
C
TYR
178
C
SER
217
C
SER
181
C
ILE
235
C
ILE
199
C
LEU
237
C
LEU
201
binding site for residue PO4 A 501
A
PO4
501
Software
7
binding site for residue PO4 A 502
A
PO4
502
Software
4
binding site for residue PO4 B 301
B
PO4
301
Software
8
binding site for residue PO4 C 301
C
PO4
301
Software
7
A
TYR
198
A
TYR
162
7
1_555
A
HIS
216
A
HIS
180
7
1_555
A
SER
231
A
SER
195
7
1_555
A
HIS
232
A
HIS
196
7
1_555
A
GLY
233
A
GLY
197
7
1_555
A
CYS
234
A
CYS
198
7
1_555
A
ASN
236
A
ASN
200
7
1_555
A
ARG
186
A
ARG
150
4
1_555
A
LEU
192
A
LEU
156
4
1_555
A
SER
193
A
SER
157
4
1_555
A
HOH
650
H
HOH
4
1_555
B
TYR
198
B
TYR
162
8
1_555
B
HIS
216
B
HIS
180
8
1_555
B
SER
231
B
SER
195
8
1_555
B
HIS
232
B
HIS
196
8
1_555
B
GLY
233
B
GLY
197
8
1_555
B
CYS
234
B
CYS
198
8
1_555
B
ASN
236
B
ASN
200
8
1_555
B
HOH
453
I
HOH
8
1_555
C
TYR
198
C
TYR
162
7
1_555
C
HIS
216
C
HIS
180
7
1_555
C
SER
231
C
SER
195
7
1_555
C
HIS
232
C
HIS
196
7
1_555
C
GLY
233
C
GLY
197
7
1_555
C
CYS
234
C
CYS
198
7
1_555
C
ASN
236
C
ASN
200
7
1_555
20
C 2 2 21