0.022923 0.000000 0.007038 0.000000 0.018344 0.000000 0.000000 0.000000 0.015754 0.000000 0.000000 0.000000 Wang, R. Li, Y. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.000 107.070 90.000 43.624 54.514 66.402 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C21 H18 N O4 1 348.372 1,2-dimethoxy-12-methyl[1,3]benzodioxolo[5,6-c]phenanthridin-12-ium chelerythrine non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H Y 74 N C Y 75 N C Y 76 N C Y 77 N C Y 78 N C Y 79 N C Y 80 N C Y 81 N C Y 82 N N Y 83 N C Y 84 N C Y 85 N C N 86 N C Y 87 N C Y 88 N C Y 89 N C Y 90 N C N 91 N O N 92 N C N 93 N O N 94 N C Y 95 N C Y 96 N C N 97 N O N 98 N C N 99 N O N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N N N 119 R C N 120 N C N 121 N O N 122 N C N 123 N S N 124 N O N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N N N 133 S C N 134 N C N 135 N O N 136 N C N 137 N C N 138 N C N 139 N O N 140 N N N 141 N O N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N N N 153 S C N 154 N C N 155 N O N 156 N C N 157 N C N 158 N C N 159 N O N 160 N O N 161 N O N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N N N 172 N C N 173 N C N 174 N O N 175 N O N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N N N 182 S C N 183 N C N 184 N O N 185 N C Y 186 N C Y 187 N N Y 188 N C Y 189 N C Y 190 N N N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N O N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 S C N 210 N C N 211 N C N 212 N C N 213 N O N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N N N 228 S C N 229 N C N 230 N O N 231 N C N 232 N C N 233 N C N 234 N C N 235 N O N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N N N 250 S C N 251 N C N 252 N O N 253 N C N 254 N C N 255 N C N 256 N C N 257 N N N 258 N O N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N N N 275 S C N 276 N C N 277 N O N 278 N C N 279 N C N 280 N S N 281 N C N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 S C N 296 N C N 297 N O N 298 N C Y 299 N C Y 300 N C Y 301 N C Y 302 N C Y 303 N C Y 304 N C N 305 N O N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N N N 318 S C N 319 N C N 320 N O N 321 N C N 322 N C N 323 N C N 324 N O N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C N 339 N O N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 R C N 353 N O N 354 N C N 355 N O N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N N N 366 S C N 367 N C N 368 N O N 369 N C Y 370 N C Y 371 N C Y 372 N C Y 373 N C Y 374 N C Y 375 N C N 376 N O N 377 N O N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N N N 390 S C N 391 N C N 392 N O N 393 N C N 394 N C N 395 N C N 396 N O N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing Y 70 N doub Y 71 N sing Y 72 N sing Y 73 N sing Y 74 N doub Y 75 N sing Y 76 N sing Y 77 N doub Y 78 N sing Y 79 N sing Y 80 N sing Y 81 N doub Y 82 N doub N 83 N sing Y 84 N doub Y 85 N sing Y 86 N sing Y 87 N sing Y 88 N sing Y 89 N doub N 90 N sing Y 91 N doub N 92 N sing N 93 N sing N 94 N sing Y 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N doub N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N doub N 184 N sing N 185 N sing N 186 N sing N 187 N sing Y 188 N sing Y 189 N doub Y 190 N doub N 191 N sing Y 192 N sing N 193 N sing Y 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N doub N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N doub N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing Y 296 N doub Y 297 N sing Y 298 N sing N 299 N sing Y 300 N doub N 301 N sing Y 302 N doub N 303 N sing Y 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N doub N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N doub N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N doub N 361 N sing N 362 N sing N 363 N sing N 364 N sing Y 365 N doub Y 366 N sing Y 367 N sing N 368 N sing Y 369 N doub N 370 N sing Y 371 N doub N 372 N sing Y 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N doub N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing UK Sci Rep 2045-2322 5 12222 12222 10.1038/srep12222 26183621 Selective targeting of PPAR gamma by the natural product chelerythrine with a unique binding mode and improved antidiabetic potency. 2015 10.2210/pdb4y29/pdb pdb_00004y29 100 1 CCD 2013-05-31 ADSC QUANTUM 315r double crystal SINGLE WAVELENGTH M x-ray 1 1.0050 1.0 BL17U SSRF 1.0050 SYNCHROTRON SSRF BEAMLINE BL17U 30704.734 Peroxisome proliferator-activated receptor gamma UNP residues 236-504 1 man polymer 1173.379 Peptide from Nuclear receptor coactivator 1 1 syn polymer 348.372 1,2-dimethoxy-12-methyl[1,3]benzodioxolo[5,6-c]phenanthridin-12-ium 1 nat non-polymer 18.015 water 197 nat water PPAR-gamma,Nuclear receptor subfamily 1 group C member 3 NCoA-1,Class E basic helix-loop-helix protein 74,bHLHe74,Protein Hin-2,RIP160,Renal carcinoma antigen NY-REN-52,Steroid receptor coactivator 1,SRC-1 no no SADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQF RSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPK FEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVT EHVQLLQVIKKTETDMSLHPLLQEIYKDL SADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQF RSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPK FEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVT EHVQLLQVIKKTETDMSLHPLLQEIYKDL A polypeptide(L) no no KSLLQQLLTE KSLLQQLLTE B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 269 PPARG, NR1C3 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21(DE3) plasmid Biological sequence pET24 1 2.37 48.05 VAPOR DIFFUSION, HANGING DROP 0.2 M Sodium thiocyanate, 20% w/v PEG 3350 293.15 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_oper_list repository Initial release Data collection Database references Derived calculations Refinement description 1 0 2015-09-09 1 1 2023-11-08 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_oper_list.symmetry_operation China National Natural Science Foundation of China 31270776 N RCSB Y PDBJ 2015-02-09 REL REL CTI 1,2-dimethoxy-12-methyl[1,3]benzodioxolo[5,6-c]phenanthridin-12-ium HOH water 9606 Human Homo sapiens sample 1 10 3U9Q PDB experimental model CTI 501 3 CTI CTI 501 A HOH 605 4 HOH HOH 601 A HOH 601 4 HOH HOH 602 A HOH 611 4 HOH HOH 603 A HOH 602 4 HOH HOH 604 A HOH 607 4 HOH HOH 605 A HOH 617 4 HOH HOH 606 A HOH 604 4 HOH HOH 607 A HOH 606 4 HOH HOH 608 A HOH 612 4 HOH HOH 609 A HOH 613 4 HOH HOH 610 A HOH 618 4 HOH HOH 611 A HOH 615 4 HOH HOH 612 A HOH 614 4 HOH HOH 613 A HOH 603 4 HOH HOH 614 A HOH 609 4 HOH HOH 615 A HOH 629 4 HOH HOH 616 A HOH 610 4 HOH HOH 617 A HOH 623 4 HOH HOH 618 A HOH 621 4 HOH HOH 619 A HOH 627 4 HOH HOH 620 A HOH 616 4 HOH HOH 621 A HOH 620 4 HOH HOH 622 A HOH 619 4 HOH HOH 623 A HOH 626 4 HOH HOH 624 A HOH 622 4 HOH HOH 625 A HOH 628 4 HOH HOH 626 A HOH 608 4 HOH HOH 627 A HOH 625 4 HOH HOH 628 A HOH 637 4 HOH HOH 629 A HOH 632 4 HOH HOH 630 A HOH 644 4 HOH HOH 631 A HOH 645 4 HOH HOH 632 A HOH 652 4 HOH HOH 633 A HOH 638 4 HOH HOH 634 A HOH 648 4 HOH HOH 635 A HOH 647 4 HOH HOH 636 A HOH 624 4 HOH HOH 637 A HOH 630 4 HOH HOH 638 A HOH 653 4 HOH HOH 639 A HOH 640 4 HOH HOH 640 A HOH 650 4 HOH HOH 641 A HOH 654 4 HOH HOH 642 A HOH 633 4 HOH HOH 643 A HOH 635 4 HOH HOH 644 A HOH 662 4 HOH HOH 645 A HOH 636 4 HOH HOH 646 A HOH 659 4 HOH HOH 647 A HOH 642 4 HOH HOH 648 A HOH 657 4 HOH HOH 649 A HOH 641 4 HOH HOH 650 A HOH 651 4 HOH HOH 651 A HOH 660 4 HOH HOH 652 A HOH 634 4 HOH HOH 653 A HOH 646 4 HOH HOH 654 A HOH 655 4 HOH HOH 655 A HOH 665 4 HOH HOH 656 A HOH 643 4 HOH HOH 657 A HOH 668 4 HOH HOH 658 A HOH 656 4 HOH HOH 659 A HOH 676 4 HOH HOH 660 A HOH 667 4 HOH HOH 661 A HOH 639 4 HOH HOH 662 A HOH 675 4 HOH HOH 663 A HOH 663 4 HOH HOH 664 A HOH 683 4 HOH HOH 665 A HOH 666 4 HOH HOH 666 A HOH 685 4 HOH HOH 667 A HOH 649 4 HOH HOH 668 A HOH 677 4 HOH HOH 669 A HOH 658 4 HOH HOH 670 A HOH 664 4 HOH HOH 671 A HOH 671 4 HOH HOH 672 A HOH 672 4 HOH HOH 673 A HOH 679 4 HOH HOH 674 A HOH 661 4 HOH HOH 675 A HOH 670 4 HOH HOH 676 A HOH 687 4 HOH HOH 677 A HOH 689 4 HOH HOH 678 A HOH 678 4 HOH HOH 679 A HOH 688 4 HOH HOH 680 A HOH 701 4 HOH HOH 681 A HOH 706 4 HOH HOH 682 A HOH 680 4 HOH HOH 683 A HOH 669 4 HOH HOH 684 A HOH 697 4 HOH HOH 685 A HOH 693 4 HOH HOH 686 A HOH 681 4 HOH HOH 687 A HOH 682 4 HOH HOH 688 A HOH 699 4 HOH HOH 689 A HOH 691 4 HOH HOH 690 A HOH 700 4 HOH HOH 691 A HOH 696 4 HOH HOH 692 A HOH 686 4 HOH HOH 693 A HOH 690 4 HOH HOH 694 A HOH 728 4 HOH HOH 695 A HOH 709 4 HOH HOH 696 A HOH 711 4 HOH HOH 697 A HOH 708 4 HOH HOH 698 A HOH 727 4 HOH HOH 699 A HOH 684 4 HOH HOH 700 A HOH 703 4 HOH HOH 701 A HOH 692 4 HOH HOH 702 A HOH 717 4 HOH HOH 703 A HOH 704 4 HOH HOH 704 A HOH 694 4 HOH HOH 705 A HOH 702 4 HOH HOH 706 A HOH 723 4 HOH HOH 707 A HOH 720 4 HOH HOH 708 A HOH 710 4 HOH HOH 709 A HOH 724 4 HOH HOH 710 A HOH 698 4 HOH HOH 711 A HOH 719 4 HOH HOH 712 A HOH 714 4 HOH HOH 713 A HOH 715 4 HOH HOH 714 A HOH 713 4 HOH HOH 715 A HOH 718 4 HOH HOH 716 A HOH 707 4 HOH HOH 717 A HOH 721 4 HOH HOH 718 A HOH 695 4 HOH HOH 719 A HOH 726 4 HOH HOH 720 A HOH 732 4 HOH HOH 721 A HOH 712 4 HOH HOH 722 A HOH 730 4 HOH HOH 723 A HOH 729 4 HOH HOH 724 A HOH 733 4 HOH HOH 725 A HOH 705 4 HOH HOH 726 A HOH 735 4 HOH HOH 727 A HOH 736 4 HOH HOH 728 A HOH 734 4 HOH HOH 729 A HOH 716 4 HOH HOH 730 A HOH 737 4 HOH HOH 731 A HOH 731 4 HOH HOH 732 A HOH 738 4 HOH HOH 733 A HOH 739 4 HOH HOH 734 A HOH 722 4 HOH HOH 735 A HOH 745 4 HOH HOH 736 A HOH 748 4 HOH HOH 737 A HOH 742 4 HOH HOH 738 A HOH 746 4 HOH HOH 739 A HOH 743 4 HOH HOH 740 A HOH 750 4 HOH HOH 741 A HOH 741 4 HOH HOH 742 A HOH 753 4 HOH HOH 743 A HOH 747 4 HOH HOH 744 A HOH 749 4 HOH HOH 745 A HOH 744 4 HOH HOH 746 A HOH 752 4 HOH HOH 747 A HOH 740 4 HOH HOH 748 A HOH 755 4 HOH HOH 749 A HOH 754 4 HOH HOH 750 A HOH 756 4 HOH HOH 751 A HOH 757 4 HOH HOH 752 A HOH 759 4 HOH HOH 753 A HOH 758 4 HOH HOH 754 A HOH 766 4 HOH HOH 755 A HOH 760 4 HOH HOH 756 A HOH 765 4 HOH HOH 757 A HOH 762 4 HOH HOH 758 A HOH 761 4 HOH HOH 759 A HOH 764 4 HOH HOH 760 A HOH 767 4 HOH HOH 761 A HOH 763 4 HOH HOH 762 A HOH 768 4 HOH HOH 763 A HOH 773 4 HOH HOH 764 A HOH 770 4 HOH HOH 765 A HOH 772 4 HOH HOH 766 A HOH 769 4 HOH HOH 767 A HOH 776 4 HOH HOH 768 A HOH 778 4 HOH HOH 769 A HOH 779 4 HOH HOH 770 A HOH 775 4 HOH HOH 771 A HOH 774 4 HOH HOH 772 A HOH 777 4 HOH HOH 773 A HOH 780 4 HOH HOH 774 A HOH 781 4 HOH HOH 775 A HOH 783 4 HOH HOH 776 A HOH 786 4 HOH HOH 777 A HOH 784 4 HOH HOH 778 A HOH 785 4 HOH HOH 779 A HOH 787 4 HOH HOH 780 A HOH 782 4 HOH HOH 781 A HOH 791 4 HOH HOH 782 A HOH 788 4 HOH HOH 783 A HOH 790 4 HOH HOH 784 A HOH 793 4 HOH HOH 785 A HOH 792 4 HOH HOH 786 A HOH 794 4 HOH HOH 787 A HOH 796 4 HOH HOH 788 A HOH 795 4 HOH HOH 789 A HOH 797 4 HOH HOH 790 A HOH 798 4 HOH HOH 791 A HOH 799 4 HOH HOH 792 A HOH 800 4 HOH HOH 793 A HOH 801 4 HOH HOH 794 A HOH 1502 4 HOH HOH 1501 B HOH 1503 4 HOH HOH 1502 B HOH 1504 4 HOH HOH 1503 B SER 208 n 1 SER 208 A ALA 209 n 2 ALA 209 A ASP 210 n 3 ASP 210 A LEU 211 n 4 LEU 211 A ARG 212 n 5 ARG 212 A ALA 213 n 6 ALA 213 A LEU 214 n 7 LEU 214 A ALA 215 n 8 ALA 215 A LYS 216 n 9 LYS 216 A HIS 217 n 10 HIS 217 A LEU 218 n 11 LEU 218 A TYR 219 n 12 TYR 219 A ASP 220 n 13 ASP 220 A SER 221 n 14 SER 221 A TYR 222 n 15 TYR 222 A ILE 223 n 16 ILE 223 A LYS 224 n 17 LYS 224 A SER 225 n 18 SER 225 A PHE 226 n 19 PHE 226 A PRO 227 n 20 PRO 227 A LEU 228 n 21 LEU 228 A THR 229 n 22 THR 229 A LYS 230 n 23 LYS 230 A ALA 231 n 24 ALA 231 A LYS 232 n 25 LYS 232 A ALA 233 n 26 ALA 233 A ARG 234 n 27 ARG 234 A ALA 235 n 28 ALA 235 A ILE 236 n 29 ILE 236 A LEU 237 n 30 LEU 237 A THR 238 n 31 THR 238 A GLY 239 n 32 GLY 239 A LYS 240 n 33 LYS 240 A THR 241 n 34 THR 241 A THR 242 n 35 THR 242 A ASP 243 n 36 ASP 243 A LYS 244 n 37 LYS 244 A SER 245 n 38 SER 245 A PRO 246 n 39 PRO 246 A PHE 247 n 40 PHE 247 A VAL 248 n 41 VAL 248 A ILE 249 n 42 ILE 249 A TYR 250 n 43 TYR 250 A ASP 251 n 44 ASP 251 A MET 252 n 45 MET 252 A ASN 253 n 46 ASN 253 A SER 254 n 47 SER 254 A LEU 255 n 48 LEU 255 A MET 256 n 49 MET 256 A MET 257 n 50 MET 257 A GLY 258 n 51 GLY 258 A GLU 259 n 52 GLU 259 A ASP 260 n 53 ASP 260 A LYS 261 n 54 LYS 261 A ILE 262 n 55 ILE 262 A n 56 263 A n 57 264 A n 58 265 A n 59 266 A n 60 267 A n 61 268 A n 62 269 A n 63 270 A n 64 271 A n 65 272 A n 66 273 A n 67 274 A LYS 275 n 68 LYS 275 A GLU 276 n 69 GLU 276 A VAL 277 n 70 VAL 277 A ALA 278 n 71 ALA 278 A ILE 279 n 72 ILE 279 A ARG 280 n 73 ARG 280 A ILE 281 n 74 ILE 281 A PHE 282 n 75 PHE 282 A GLN 283 n 76 GLN 283 A GLY 284 n 77 GLY 284 A CYS 285 n 78 CYS 285 A GLN 286 n 79 GLN 286 A PHE 287 n 80 PHE 287 A ARG 288 n 81 ARG 288 A SER 289 n 82 SER 289 A VAL 290 n 83 VAL 290 A GLU 291 n 84 GLU 291 A ALA 292 n 85 ALA 292 A VAL 293 n 86 VAL 293 A GLN 294 n 87 GLN 294 A GLU 295 n 88 GLU 295 A ILE 296 n 89 ILE 296 A THR 297 n 90 THR 297 A GLU 298 n 91 GLU 298 A TYR 299 n 92 TYR 299 A ALA 300 n 93 ALA 300 A LYS 301 n 94 LYS 301 A SER 302 n 95 SER 302 A ILE 303 n 96 ILE 303 A PRO 304 n 97 PRO 304 A GLY 305 n 98 GLY 305 A PHE 306 n 99 PHE 306 A VAL 307 n 100 VAL 307 A ASN 308 n 101 ASN 308 A LEU 309 n 102 LEU 309 A ASP 310 n 103 ASP 310 A LEU 311 n 104 LEU 311 A ASN 312 n 105 ASN 312 A ASP 313 n 106 ASP 313 A GLN 314 n 107 GLN 314 A VAL 315 n 108 VAL 315 A THR 316 n 109 THR 316 A LEU 317 n 110 LEU 317 A LEU 318 n 111 LEU 318 A LYS 319 n 112 LYS 319 A TYR 320 n 113 TYR 320 A GLY 321 n 114 GLY 321 A VAL 322 n 115 VAL 322 A HIS 323 n 116 HIS 323 A GLU 324 n 117 GLU 324 A ILE 325 n 118 ILE 325 A ILE 326 n 119 ILE 326 A TYR 327 n 120 TYR 327 A THR 328 n 121 THR 328 A MET 329 n 122 MET 329 A LEU 330 n 123 LEU 330 A ALA 331 n 124 ALA 331 A SER 332 n 125 SER 332 A LEU 333 n 126 LEU 333 A MET 334 n 127 MET 334 A ASN 335 n 128 ASN 335 A LYS 336 n 129 LYS 336 A ASP 337 n 130 ASP 337 A GLY 338 n 131 GLY 338 A VAL 339 n 132 VAL 339 A LEU 340 n 133 LEU 340 A ILE 341 n 134 ILE 341 A SER 342 n 135 SER 342 A GLU 343 n 136 GLU 343 A GLY 344 n 137 GLY 344 A GLN 345 n 138 GLN 345 A GLY 346 n 139 GLY 346 A PHE 347 n 140 PHE 347 A MET 348 n 141 MET 348 A THR 349 n 142 THR 349 A ARG 350 n 143 ARG 350 A GLU 351 n 144 GLU 351 A PHE 352 n 145 PHE 352 A LEU 353 n 146 LEU 353 A LYS 354 n 147 LYS 354 A SER 355 n 148 SER 355 A LEU 356 n 149 LEU 356 A ARG 357 n 150 ARG 357 A LYS 358 n 151 LYS 358 A PRO 359 n 152 PRO 359 A PHE 360 n 153 PHE 360 A GLY 361 n 154 GLY 361 A ASP 362 n 155 ASP 362 A PHE 363 n 156 PHE 363 A MET 364 n 157 MET 364 A GLU 365 n 158 GLU 365 A PRO 366 n 159 PRO 366 A LYS 367 n 160 LYS 367 A PHE 368 n 161 PHE 368 A GLU 369 n 162 GLU 369 A PHE 370 n 163 PHE 370 A ALA 371 n 164 ALA 371 A VAL 372 n 165 VAL 372 A LYS 373 n 166 LYS 373 A PHE 374 n 167 PHE 374 A ASN 375 n 168 ASN 375 A ALA 376 n 169 ALA 376 A LEU 377 n 170 LEU 377 A GLU 378 n 171 GLU 378 A LEU 379 n 172 LEU 379 A ASP 380 n 173 ASP 380 A ASP 381 n 174 ASP 381 A SER 382 n 175 SER 382 A ASP 383 n 176 ASP 383 A LEU 384 n 177 LEU 384 A ALA 385 n 178 ALA 385 A ILE 386 n 179 ILE 386 A PHE 387 n 180 PHE 387 A ILE 388 n 181 ILE 388 A ALA 389 n 182 ALA 389 A VAL 390 n 183 VAL 390 A ILE 391 n 184 ILE 391 A ILE 392 n 185 ILE 392 A LEU 393 n 186 LEU 393 A SER 394 n 187 SER 394 A GLY 395 n 188 GLY 395 A ASP 396 n 189 ASP 396 A ARG 397 n 190 ARG 397 A PRO 398 n 191 PRO 398 A GLY 399 n 192 GLY 399 A LEU 400 n 193 LEU 400 A LEU 401 n 194 LEU 401 A ASN 402 n 195 ASN 402 A VAL 403 n 196 VAL 403 A LYS 404 n 197 LYS 404 A PRO 405 n 198 PRO 405 A ILE 406 n 199 ILE 406 A GLU 407 n 200 GLU 407 A ASP 408 n 201 ASP 408 A ILE 409 n 202 ILE 409 A GLN 410 n 203 GLN 410 A ASP 411 n 204 ASP 411 A ASN 412 n 205 ASN 412 A LEU 413 n 206 LEU 413 A LEU 414 n 207 LEU 414 A GLN 415 n 208 GLN 415 A ALA 416 n 209 ALA 416 A LEU 417 n 210 LEU 417 A GLU 418 n 211 GLU 418 A LEU 419 n 212 LEU 419 A GLN 420 n 213 GLN 420 A LEU 421 n 214 LEU 421 A LYS 422 n 215 LYS 422 A LEU 423 n 216 LEU 423 A ASN 424 n 217 ASN 424 A HIS 425 n 218 HIS 425 A PRO 426 n 219 PRO 426 A GLU 427 n 220 GLU 427 A SER 428 n 221 SER 428 A SER 429 n 222 SER 429 A GLN 430 n 223 GLN 430 A LEU 431 n 224 LEU 431 A PHE 432 n 225 PHE 432 A ALA 433 n 226 ALA 433 A LYS 434 n 227 LYS 434 A LEU 435 n 228 LEU 435 A LEU 436 n 229 LEU 436 A GLN 437 n 230 GLN 437 A LYS 438 n 231 LYS 438 A MET 439 n 232 MET 439 A THR 440 n 233 THR 440 A ASP 441 n 234 ASP 441 A LEU 442 n 235 LEU 442 A ARG 443 n 236 ARG 443 A GLN 444 n 237 GLN 444 A ILE 445 n 238 ILE 445 A VAL 446 n 239 VAL 446 A THR 447 n 240 THR 447 A GLU 448 n 241 GLU 448 A HIS 449 n 242 HIS 449 A VAL 450 n 243 VAL 450 A GLN 451 n 244 GLN 451 A LEU 452 n 245 LEU 452 A LEU 453 n 246 LEU 453 A GLN 454 n 247 GLN 454 A VAL 455 n 248 VAL 455 A ILE 456 n 249 ILE 456 A LYS 457 n 250 LYS 457 A LYS 458 n 251 LYS 458 A THR 459 n 252 THR 459 A GLU 460 n 253 GLU 460 A THR 461 n 254 THR 461 A ASP 462 n 255 ASP 462 A MET 463 n 256 MET 463 A SER 464 n 257 SER 464 A LEU 465 n 258 LEU 465 A HIS 466 n 259 HIS 466 A PRO 467 n 260 PRO 467 A LEU 468 n 261 LEU 468 A LEU 469 n 262 LEU 469 A GLN 470 n 263 GLN 470 A GLU 471 n 264 GLU 471 A ILE 472 n 265 ILE 472 A TYR 473 n 266 TYR 473 A LYS 474 n 267 LYS 474 A ASP 475 n 268 ASP 475 A LEU 476 n 269 LEU 476 A LYS 1432 n 1 LYS 1432 B SER 1433 n 2 SER 1433 B LEU 1434 n 3 LEU 1434 B LEU 1435 n 4 LEU 1435 B GLN 1436 n 5 GLN 1436 B GLN 1437 n 6 GLN 1437 B LEU 1438 n 7 LEU 1438 B LEU 1439 n 8 LEU 1439 B THR 1440 n 9 THR 1440 B GLU 1441 n 10 GLU 1441 B author_and_software_defined_assembly PISA 2 dimeric 980 -9 13070 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 249 A N ILE 42 A O PHE 347 A O PHE 140 A O MET 348 A O MET 141 A N VAL 339 A N VAL 132 A O GLY 338 A O GLY 131 A N ASN 335 A N ASN 128 1 A LYS 263 A LYS 56 1 Y 1 A PHE 264 A PHE 57 1 Y 1 A LYS 265 A LYS 58 1 Y 1 A HIS 266 A HIS 59 1 Y 1 A ILE 267 A ILE 60 1 Y 1 A THR 268 A THR 61 1 Y 1 A PRO 269 A PRO 62 1 Y 1 A LEU 270 A LEU 63 1 Y 1 A GLN 271 A GLN 64 1 Y 1 A GLU 272 A GLU 65 1 Y 1 A GLN 273 A GLN 66 1 Y 1 A SER 274 A SER 67 1 Y 1 6.48 0.90 118.30 124.78 A A A CB CG OD1 ASP ASP ASP 383 383 383 N 1 A A CB SG CYS CYS 285 285 -0.097 0.016 1.812 1.715 N 1 A LYS 240 -145.53 23.32 1 A ASP 243 -58.75 -151.37 1 A LYS 244 56.43 -154.98 1 A GLU 259 -23.45 -53.78 1 A ASP 260 -66.86 50.21 1 A LYS 261 -175.30 82.47 1 A ASN 335 -124.44 -169.99 1 A LEU 393 -82.40 49.63 1 A THR 459 -142.40 -128.44 1 A GLU 460 21.69 86.77 1 A MET 463 -44.07 152.37 1 A ASP 475 67.83 -84.59 82.830 26.6000 6.110 -0.0100 0.0000 0.0200 0.0200 0.0000 0.0100 0.9490 0.9310 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY 0.2187 0.1770 0.1791 1.9800 41.3600 1068 19842 5.1000 99.9400 0.2127 0.1718 0.8657 3.4340 0.0980 0.1703 0.1522 RANDOM 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT 0.1700 0.1520 0.8000 0.8000 1.4000 3U9Q MAXIMUM LIKELIHOOD MASK 1.9800 41.3600 197 2358 39.00 31.50 26 0 2135 267 0.026 0.022 2197 2.069 2.011 2962 5.853 5.000 264 39.019 25.532 94 14.554 15.000 429 15.788 15.000 8 0.148 0.200 344 0.010 0.021 1579 1.536 1.500 1330 2.770 2.000 2152 4.056 3.000 867 6.770 4.500 810 0.3100 0.2160 2.0310 82 1448 1530 20 100.0000 1.980 50.000 4Y29 21090 0.068 1.198 1 24.830 11.600 110768 5.300 99.900 0.356 1.980 2.010 1051 0.893 1 5.200 0 100.000 0.317 2.010 2.050 1028 0.934 1 5.200 0 100.000 0.263 2.050 2.090 1073 0.960 1 5.200 0 100.000 0.223 2.090 2.130 1039 1.024 1 5.300 0 100.000 0.216 2.130 2.180 1059 0.996 1 5.300 0 100.000 0.185 2.180 2.230 1018 1.027 1 5.300 0 100.000 0.160 2.230 2.290 1058 1.148 1 5.300 0 100.000 0.145 2.290 2.350 1056 1.100 1 5.200 0 100.000 0.131 2.350 2.420 1034 1.127 1 5.300 0 100.000 0.116 2.420 2.490 1061 1.176 1 5.300 0 100.000 0.105 2.490 2.580 1057 1.156 1 5.300 0 100.000 0.094 2.580 2.690 1048 1.232 1 5.300 0 100.000 0.080 2.690 2.810 1041 1.226 1 5.300 0 100.000 0.068 2.810 2.960 1060 1.223 1 5.300 0 100.000 0.060 2.960 3.140 1057 1.335 1 5.300 0 100.000 0.053 3.140 3.390 1062 1.701 1 5.300 0 100.000 0.044 3.390 3.730 1053 1.652 1 5.300 0 99.900 0.033 3.730 4.260 1067 1.361 1 5.300 0 99.900 0.030 4.260 5.370 1069 1.286 1 5.300 0 99.300 0.027 5.370 50.000 1099 1.382 1 5.000 0 99.700 refinement REFMAC 5.7.0029 data reduction SCALEPACK phasing PHASER 2.5.1 data extraction PDB_EXTRACT 3.15 Identification of a novel PPARg ligand that regulates metabolism 1 N N 2 N N 3 N N 4 N N 4 N N A SER 208 A SER 1 HELX_P A PHE 226 A PHE 19 1 AA1 19 A THR 229 A THR 22 HELX_P A GLY 239 A GLY 32 1 AA2 11 A ASP 251 A ASP 44 HELX_P A GLU 259 A GLU 52 1 AA3 9 A GLU 276 A GLU 69 HELX_P A ILE 303 A ILE 96 1 AA4 28 A ASP 310 A ASP 103 HELX_P A LEU 333 A LEU 126 1 AA5 24 A ARG 350 A ARG 143 HELX_P A SER 355 A SER 148 1 AA6 6 A PRO 359 A PRO 152 HELX_P A PHE 363 A PHE 156 5 AA7 5 A MET 364 A MET 157 HELX_P A ALA 376 A ALA 169 1 AA8 13 A ASP 380 A ASP 173 HELX_P A LEU 393 A LEU 186 1 AA9 14 A ASN 402 A ASN 195 HELX_P A HIS 425 A HIS 218 1 AB1 24 A GLN 430 A GLN 223 HELX_P A LYS 458 A LYS 251 1 AB2 29 A HIS 466 A HIS 259 HELX_P A LYS 474 A LYS 267 1 AB3 9 B SER 1433 B SER 2 HELX_P B GLU 1441 B GLU 10 1 AB4 9 DNA BINDING PROTEIN/TRANSCRIPTION AF-2 helix, ligand binding pocket, three-layer helical sandwich, transcription regulator PPARg, NR1C3, Peroxisome proliferator-activated receptor gamma, NHR, nuclear receptor, coactivator, Transcription factor, DNA BINDING PROTEIN-TRANSCRIPTION complex A LYS 244 A LYS 37 1 A SER 245 A SER 38 7.22 A LYS 261 A LYS 54 1 A ILE 262 A ILE 55 -12.07 A LYS 358 A LYS 151 1 A PRO 359 A PRO 152 -7.75 PPARG_HUMAN UNP 1 236 P37231 SADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQF RSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPK FEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVT EHVQLLQVIKKTETDMSLHPLLQEIYKDL NCOA1_HUMAN UNP 2 1432 Q15788 KSLLQQLLTE 236 504 4Y29 208 476 P37231 A 1 1 269 1432 1441 4Y29 1432 1441 Q15788 B 2 1 10 4 parallel anti-parallel anti-parallel A PHE 247 A PHE 40 A ILE 249 A ILE 42 A GLY 346 A GLY 139 A THR 349 A THR 142 A GLY 338 A GLY 131 A ILE 341 A ILE 134 A MET 334 A MET 127 A ASN 335 A ASN 128 binding site for residue CTI A 501 A CTI 501 Software 11 A ILE 281 A ILE 74 11 1_555 A CYS 285 A CYS 78 11 1_555 A ARG 288 A ARG 81 11 1_555 A SER 289 A SER 82 11 1_555 A LEU 330 A LEU 123 11 1_555 A LEU 333 A LEU 126 11 1_555 A LEU 340 A LEU 133 11 1_555 A LEU 353 A LEU 146 11 1_555 A PHE 360 A PHE 153 11 1_555 A MET 364 A MET 157 11 1_555 A HOH 742 D HOH 11 1_555 4 P 1 21 1