0.023414 0.000000 0.000000 0.000000 0.011707 0.000000 0.000000 0.000000 0.015739 0.00000 0.00000 0.00000 Connelly, S. Bradbury, N.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 42.709 85.420 63.537 C14 H8 Cl2 N2 O3 323.131 2,6-dichloro-4-[5-(3-hydroxyphenyl)-1,3,4-oxadiazol-2-yl]phenol non-polymer C6 H14 N2 O5 S 226.251 n N~6~-sulfo-L-lysine L-peptide linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Y 1 N C Y 2 N C N 3 N O Y 4 N C Y 5 N C Y 6 N C Y 7 N C Y 8 N C Y 9 N O Y 10 N N Y 11 N N Y 12 N C Y 13 N C Y 14 N C Y 15 N C N 16 N CL Y 17 N C N 18 N O Y 19 N C N 20 N CL Y 21 N C N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N N N 31 S C N 32 N C N 33 N C N 34 N O N 35 N O N 36 N O N 37 N C N 38 N C N 39 N C N 40 N N N 41 N S N 42 N O N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N O N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N O N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N N N 72 S C N 73 N C N 74 N O N 75 N C N 76 N C N 77 N C N 78 N N N 79 N C N 80 N N N 81 N N N 82 N O N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N N N 99 S C N 100 N C N 101 N O N 102 N C N 103 N C N 104 N O N 105 N N N 106 N O N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N N N 116 S C N 117 N C N 118 N O N 119 N C N 120 N C N 121 N O N 122 N O N 123 N O N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N N N 132 R C N 133 N C N 134 N O N 135 N C N 136 N S N 137 N O N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 S C N 147 N C N 148 N O N 149 N C N 150 N C N 151 N C N 152 N O N 153 N O N 154 N O N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N N N 165 N C N 166 N C N 167 N O N 168 N O N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N N N 175 S C N 176 N C N 177 N O N 178 N C Y 179 N C Y 180 N N Y 181 N C Y 182 N C Y 183 N N N 184 N O N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N H N 197 N H N 198 N N N 199 S C N 200 N C N 201 N O N 202 S C N 203 N C N 204 N C N 205 N C N 206 N O N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N N N 221 S C N 222 N C N 223 N O N 224 N C N 225 N C N 226 N C N 227 N C N 228 N O N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N N N 243 S C N 244 N C N 245 N O N 246 N C N 247 N C N 248 N C N 249 N C N 250 N N N 251 N O N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N N N 268 S C N 269 N C N 270 N O N 271 N C N 272 N C N 273 N S N 274 N C N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 N C Y 292 N C Y 293 N C Y 294 N C Y 295 N C Y 296 N C Y 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N N N 311 S C N 312 N C N 313 N O N 314 N C N 315 N C N 316 N C N 317 N O N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N N N 328 S C N 329 N C N 330 N O N 331 N C N 332 N O N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N N N 342 S C N 343 N C N 344 N O N 345 R C N 346 N O N 347 N C N 348 N O N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C Y 363 N C Y 364 N C Y 365 N C Y 366 N N Y 367 N C Y 368 N C Y 369 N C Y 370 N C Y 371 N C N 372 N O N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N N N 386 S C N 387 N C N 388 N O N 389 N C Y 390 N C Y 391 N C Y 392 N C Y 393 N C Y 394 N C Y 395 N C N 396 N O N 397 N O N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N N N 410 S C N 411 N C N 412 N O N 413 N C N 414 N C N 415 N C N 416 N O N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 1 N sing N 2 N sing N 3 N sing Y 4 N doub Y 5 N sing Y 6 N sing Y 7 N doub Y 8 N doub Y 9 N sing N 10 N sing Y 11 N doub Y 12 N sing Y 13 N sing Y 14 N sing Y 15 N doub N 16 N sing Y 17 N doub Y 18 N sing Y 19 N sing N 20 N sing Y 21 N doub Y 22 N doub Y 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N doub N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N doub N 41 N sing N 42 N doub N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N doub N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N doub N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N doub N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N doub N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N doub N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N doub Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N doub N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N doub N 283 N sing N 284 N sing N 285 N sing N 286 N sing Y 287 N doub Y 288 N sing Y 289 N sing N 290 N sing Y 291 N doub N 292 N sing Y 293 N doub N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N doub N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N doub N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N doub N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing Y 356 N doub Y 357 N sing Y 358 N sing N 359 N sing Y 360 N doub Y 361 N sing Y 362 N sing N 363 N sing Y 364 N sing Y 365 N doub N 366 N sing Y 367 N doub N 368 N sing Y 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N doub N 380 N sing N 381 N sing N 382 N sing N 383 N sing Y 384 N doub Y 385 N sing Y 386 N sing N 387 N sing Y 388 N doub N 389 N sing Y 390 N doub N 391 N sing Y 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N doub N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing US J.Am.Chem.Soc. JACSAT 1520-5126 137 7404 7414 10.1021/jacs.5b03042 26051248 A Fluorogenic Aryl Fluorosulfate for Intraorganellar Transthyretin Imaging in Living Cells and in Caenorhabditis elegans. 2015 10.2210/pdb4ydm/pdb pdb_00004ydm 100 1 PIXEL 2014-01-08 PSI PILATUS 6M SINGLE WAVELENGTH M x-ray 1 0.97945 1.0 BL11-1 SSRL 0.97945 SYNCHROTRON SSRL BEAMLINE BL11-1 13856.417 Transthyretin UNP residues 21-147 2 man polymer 323.131 2,6-dichloro-4-[5-(3-hydroxyphenyl)-1,3,4-oxadiazol-2-yl]phenol 2 syn non-polymer 18.015 water 197 nat water ATTR,Prealbumin,TBPA no yes GPTGTGESKCPLMV(4AK)VLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTK SYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE GPTGTGESKCPLMVXVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 127 TTR, PALB 9606 Homo sapiens 562 Escherichia coli Epicurian gold Plasmid Biological sequence pmmHA 1 2.27 41.18 VAPOR DIFFUSION, SITTING DROP 5.5 The WT-TTR was concentrated to 4 mg/mL in 10 mM NaPi, 100 mM KCl, at pH 7.6 and co-crystallized at room temperature using the vapor-diffusion sitting drop method. Crystals were grown from 1.395 M sodium citrate, 3.5% v/v glycerol at pH 5.5. The crystals were frozen using a cryo-protectant solution of 1.395 M sodium citrate, pH 5.5, containing 10% v/v glycerol 298 entity_src_gen pdbx_struct_assembly_auth_evidence pdbx_struct_oper_list pdbx_validate_close_contact chem_comp_atom chem_comp_bond database_2 diffrn_radiation_wavelength pdbx_initial_refinement_model pdbx_struct_special_symmetry repository Initial release Advisory Author supporting evidence Derived calculations Source and taxonomy Data collection Database references Derived calculations Refinement description 1 0 2015-07-15 1 1 2017-11-01 1 2 2023-09-27 _entity_src_gen.pdbx_alt_source_flag _pdbx_struct_oper_list.symmetry_operation _database_2.pdbx_DOI _database_2.pdbx_database_accession _diffrn_radiation_wavelength.wavelength N RCSB Y RCSB 2015-02-22 REL REL 1 A O HOH 397 5.87 4AJ 2,6-dichloro-4-[5-(3-hydroxyphenyl)-1,3,4-oxadiazol-2-yl]phenol HOH water 2QGB PDB experimental model DRG 5 2 4AJ 4AJ 201 A DRG 6 2 4AJ 4AJ 201 B HOH 498 3 HOH HOH 301 A HOH 118 3 HOH HOH 302 A HOH 311 3 HOH HOH 303 A HOH 26 3 HOH HOH 304 A HOH 67 3 HOH HOH 305 A HOH 500 3 HOH HOH 306 A HOH 54 3 HOH HOH 307 A HOH 137 3 HOH HOH 308 A HOH 488 3 HOH HOH 309 A HOH 158 3 HOH HOH 310 A HOH 174 3 HOH HOH 311 A HOH 247 3 HOH HOH 312 A HOH 30 3 HOH HOH 313 A HOH 62 3 HOH HOH 314 A HOH 5 3 HOH HOH 315 A HOH 61 3 HOH HOH 316 A HOH 107 3 HOH HOH 317 A HOH 7 3 HOH HOH 318 A HOH 120 3 HOH HOH 319 A HOH 24 3 HOH HOH 320 A HOH 102 3 HOH HOH 321 A HOH 59 3 HOH HOH 322 A HOH 190 3 HOH HOH 323 A HOH 23 3 HOH HOH 324 A HOH 143 3 HOH HOH 325 A HOH 14 3 HOH HOH 326 A HOH 9 3 HOH HOH 327 A HOH 444 3 HOH HOH 328 A HOH 28 3 HOH HOH 329 A HOH 22 3 HOH HOH 330 A HOH 494 3 HOH HOH 331 A HOH 31 3 HOH HOH 332 A HOH 42 3 HOH HOH 333 A HOH 33 3 HOH HOH 334 A HOH 69 3 HOH HOH 335 A HOH 244 3 HOH HOH 336 A HOH 76 3 HOH HOH 337 A HOH 220 3 HOH HOH 338 A HOH 83 3 HOH HOH 339 A HOH 10 3 HOH HOH 340 A HOH 11 3 HOH HOH 341 A HOH 8 3 HOH HOH 342 A HOH 37 3 HOH HOH 343 A HOH 12 3 HOH HOH 344 A HOH 134 3 HOH HOH 345 A HOH 41 3 HOH HOH 346 A HOH 1 3 HOH HOH 347 A HOH 57 3 HOH HOH 348 A HOH 52 3 HOH HOH 349 A HOH 489 3 HOH HOH 350 A HOH 64 3 HOH HOH 351 A HOH 18 3 HOH HOH 352 A HOH 25 3 HOH HOH 353 A HOH 73 3 HOH HOH 354 A HOH 128 3 HOH HOH 355 A HOH 239 3 HOH HOH 356 A HOH 117 3 HOH HOH 357 A HOH 35 3 HOH HOH 358 A HOH 16 3 HOH HOH 359 A HOH 284 3 HOH HOH 360 A HOH 48 3 HOH HOH 361 A HOH 39 3 HOH HOH 362 A HOH 27 3 HOH HOH 363 A HOH 44 3 HOH HOH 364 A HOH 250 3 HOH HOH 365 A HOH 131 3 HOH HOH 366 A HOH 71 3 HOH HOH 367 A HOH 175 3 HOH HOH 368 A HOH 383 3 HOH HOH 369 A HOH 280 3 HOH HOH 370 A HOH 330 3 HOH HOH 371 A HOH 88 3 HOH HOH 372 A HOH 339 3 HOH HOH 373 A HOH 101 3 HOH HOH 374 A HOH 211 3 HOH HOH 375 A HOH 231 3 HOH HOH 376 A HOH 495 3 HOH HOH 377 A HOH 162 3 HOH HOH 378 A HOH 84 3 HOH HOH 379 A HOH 225 3 HOH HOH 380 A HOH 369 3 HOH HOH 381 A HOH 92 3 HOH HOH 382 A HOH 55 3 HOH HOH 383 A HOH 116 3 HOH HOH 384 A HOH 256 3 HOH HOH 385 A HOH 443 3 HOH HOH 386 A HOH 445 3 HOH HOH 387 A HOH 395 3 HOH HOH 388 A HOH 430 3 HOH HOH 389 A HOH 315 3 HOH HOH 390 A HOH 198 3 HOH HOH 391 A HOH 270 3 HOH HOH 392 A HOH 111 3 HOH HOH 393 A HOH 155 3 HOH HOH 394 A HOH 453 3 HOH HOH 395 A HOH 271 3 HOH HOH 396 A HOH 497 3 HOH HOH 397 A HOH 262 3 HOH HOH 301 B HOH 135 3 HOH HOH 302 B HOH 93 3 HOH HOH 303 B HOH 95 3 HOH HOH 304 B HOH 499 3 HOH HOH 305 B HOH 114 3 HOH HOH 306 B HOH 65 3 HOH HOH 307 B HOH 235 3 HOH HOH 308 B HOH 164 3 HOH HOH 309 B HOH 43 3 HOH HOH 310 B HOH 297 3 HOH HOH 311 B HOH 47 3 HOH HOH 312 B HOH 60 3 HOH HOH 313 B HOH 75 3 HOH HOH 314 B HOH 2 3 HOH HOH 315 B HOH 6 3 HOH HOH 316 B HOH 96 3 HOH HOH 317 B HOH 20 3 HOH HOH 318 B HOH 103 3 HOH HOH 319 B HOH 207 3 HOH HOH 320 B HOH 56 3 HOH HOH 321 B HOH 178 3 HOH HOH 322 B HOH 254 3 HOH HOH 323 B HOH 46 3 HOH HOH 324 B HOH 51 3 HOH HOH 325 B HOH 21 3 HOH HOH 326 B HOH 3 3 HOH HOH 327 B HOH 173 3 HOH HOH 328 B HOH 49 3 HOH HOH 329 B HOH 82 3 HOH HOH 330 B HOH 13 3 HOH HOH 331 B HOH 58 3 HOH HOH 332 B HOH 216 3 HOH HOH 333 B HOH 90 3 HOH HOH 334 B HOH 490 3 HOH HOH 335 B HOH 191 3 HOH HOH 336 B HOH 77 3 HOH HOH 337 B HOH 4 3 HOH HOH 338 B HOH 45 3 HOH HOH 339 B HOH 40 3 HOH HOH 340 B HOH 63 3 HOH HOH 341 B HOH 133 3 HOH HOH 342 B HOH 15 3 HOH HOH 343 B HOH 17 3 HOH HOH 344 B HOH 72 3 HOH HOH 345 B HOH 145 3 HOH HOH 346 B HOH 68 3 HOH HOH 347 B HOH 36 3 HOH HOH 348 B HOH 267 3 HOH HOH 349 B HOH 492 3 HOH HOH 350 B HOH 34 3 HOH HOH 351 B HOH 208 3 HOH HOH 352 B HOH 89 3 HOH HOH 353 B HOH 493 3 HOH HOH 354 B HOH 70 3 HOH HOH 355 B HOH 38 3 HOH HOH 356 B HOH 19 3 HOH HOH 357 B HOH 142 3 HOH HOH 358 B HOH 121 3 HOH HOH 359 B HOH 195 3 HOH HOH 360 B HOH 81 3 HOH HOH 361 B HOH 153 3 HOH HOH 362 B HOH 318 3 HOH HOH 363 B HOH 168 3 HOH HOH 364 B HOH 385 3 HOH HOH 365 B HOH 80 3 HOH HOH 366 B HOH 491 3 HOH HOH 367 B HOH 91 3 HOH HOH 368 B HOH 159 3 HOH HOH 369 B HOH 321 3 HOH HOH 370 B HOH 136 3 HOH HOH 371 B HOH 165 3 HOH HOH 372 B HOH 53 3 HOH HOH 373 B HOH 66 3 HOH HOH 374 B HOH 74 3 HOH HOH 375 B HOH 126 3 HOH HOH 376 B HOH 204 3 HOH HOH 377 B HOH 105 3 HOH HOH 378 B HOH 32 3 HOH HOH 379 B HOH 125 3 HOH HOH 380 B HOH 236 3 HOH HOH 381 B HOH 381 3 HOH HOH 382 B HOH 99 3 HOH HOH 383 B HOH 441 3 HOH HOH 384 B HOH 189 3 HOH HOH 385 B HOH 129 3 HOH HOH 386 B HOH 289 3 HOH HOH 387 B HOH 181 3 HOH HOH 388 B HOH 115 3 HOH HOH 389 B HOH 176 3 HOH HOH 390 B HOH 185 3 HOH HOH 391 B HOH 98 3 HOH HOH 392 B HOH 457 3 HOH HOH 393 B HOH 160 3 HOH HOH 394 B HOH 112 3 HOH HOH 395 B HOH 447 3 HOH HOH 396 B HOH 481 3 HOH HOH 397 B HOH 152 3 HOH HOH 398 B HOH 188 3 HOH HOH 399 B HOH 212 3 HOH HOH 400 B n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A CYS 10 n 10 CYS 10 A PRO 11 n 11 PRO 11 A LEU 12 n 12 LEU 12 A MET 13 n 13 MET 13 A VAL 14 n 14 VAL 14 A SYS 15 n 15 4AK 15 A VAL 16 n 16 VAL 16 A LEU 17 n 17 LEU 17 A ASP 18 n 18 ASP 18 A ALA 19 n 19 ALA 19 A VAL 20 n 20 VAL 20 A ARG 21 n 21 ARG 21 A GLY 22 n 22 GLY 22 A SER 23 n 23 SER 23 A PRO 24 n 24 PRO 24 A ALA 25 n 25 ALA 25 A ILE 26 n 26 ILE 26 A ASN 27 n 27 ASN 27 A VAL 28 n 28 VAL 28 A ALA 29 n 29 ALA 29 A VAL 30 n 30 VAL 30 A HIS 31 n 31 HIS 31 A VAL 32 n 32 VAL 32 A PHE 33 n 33 PHE 33 A ARG 34 n 34 ARG 34 A LYS 35 n 35 LYS 35 A ALA 36 n 36 ALA 36 A ALA 37 n 37 ALA 37 A ASP 38 n 38 ASP 38 A ASP 39 n 39 ASP 39 A THR 40 n 40 THR 40 A TRP 41 n 41 TRP 41 A GLU 42 n 42 GLU 42 A PRO 43 n 43 PRO 43 A PHE 44 n 44 PHE 44 A ALA 45 n 45 ALA 45 A SER 46 n 46 SER 46 A GLY 47 n 47 GLY 47 A LYS 48 n 48 LYS 48 A THR 49 n 49 THR 49 A SER 50 n 50 SER 50 A GLU 51 n 51 GLU 51 A SER 52 n 52 SER 52 A GLY 53 n 53 GLY 53 A GLU 54 n 54 GLU 54 A LEU 55 n 55 LEU 55 A HIS 56 n 56 HIS 56 A GLY 57 n 57 GLY 57 A LEU 58 n 58 LEU 58 A THR 59 n 59 THR 59 A THR 60 n 60 THR 60 A GLU 61 n 61 GLU 61 A GLU 62 n 62 GLU 62 A GLU 63 n 63 GLU 63 A PHE 64 n 64 PHE 64 A VAL 65 n 65 VAL 65 A GLU 66 n 66 GLU 66 A GLY 67 n 67 GLY 67 A ILE 68 n 68 ILE 68 A TYR 69 n 69 TYR 69 A LYS 70 n 70 LYS 70 A VAL 71 n 71 VAL 71 A GLU 72 n 72 GLU 72 A ILE 73 n 73 ILE 73 A ASP 74 n 74 ASP 74 A THR 75 n 75 THR 75 A LYS 76 n 76 LYS 76 A SER 77 n 77 SER 77 A TYR 78 n 78 TYR 78 A TRP 79 n 79 TRP 79 A LYS 80 n 80 LYS 80 A ALA 81 n 81 ALA 81 A LEU 82 n 82 LEU 82 A GLY 83 n 83 GLY 83 A ILE 84 n 84 ILE 84 A SER 85 n 85 SER 85 A PRO 86 n 86 PRO 86 A PHE 87 n 87 PHE 87 A HIS 88 n 88 HIS 88 A GLU 89 n 89 GLU 89 A HIS 90 n 90 HIS 90 A ALA 91 n 91 ALA 91 A GLU 92 n 92 GLU 92 A VAL 93 n 93 VAL 93 A VAL 94 n 94 VAL 94 A PHE 95 n 95 PHE 95 A THR 96 n 96 THR 96 A ALA 97 n 97 ALA 97 A ASN 98 n 98 ASN 98 A ASP 99 n 99 ASP 99 A SER 100 n 100 SER 100 A GLY 101 n 101 GLY 101 A PRO 102 n 102 PRO 102 A ARG 103 n 103 ARG 103 A ARG 104 n 104 ARG 104 A TYR 105 n 105 TYR 105 A THR 106 n 106 THR 106 A ILE 107 n 107 ILE 107 A ALA 108 n 108 ALA 108 A ALA 109 n 109 ALA 109 A LEU 110 n 110 LEU 110 A LEU 111 n 111 LEU 111 A SER 112 n 112 SER 112 A PRO 113 n 113 PRO 113 A TYR 114 n 114 TYR 114 A SER 115 n 115 SER 115 A TYR 116 n 116 TYR 116 A SER 117 n 117 SER 117 A THR 118 n 118 THR 118 A THR 119 n 119 THR 119 A ALA 120 n 120 ALA 120 A VAL 121 n 121 VAL 121 A VAL 122 n 122 VAL 122 A THR 123 n 123 THR 123 A ASN 124 n 124 ASN 124 A PRO 125 n 125 PRO 125 A n 126 126 A n 127 127 A n 1 1 B n 2 2 B n 3 3 B n 4 4 B n 5 5 B n 6 6 B n 7 7 B n 8 8 B n 9 9 B CYS 10 n 10 CYS 10 B PRO 11 n 11 PRO 11 B LEU 12 n 12 LEU 12 B MET 13 n 13 MET 13 B VAL 14 n 14 VAL 14 B SYS 15 n 15 4AK 15 B VAL 16 n 16 VAL 16 B LEU 17 n 17 LEU 17 B ASP 18 n 18 ASP 18 B ALA 19 n 19 ALA 19 B VAL 20 n 20 VAL 20 B ARG 21 n 21 ARG 21 B GLY 22 n 22 GLY 22 B SER 23 n 23 SER 23 B PRO 24 n 24 PRO 24 B ALA 25 n 25 ALA 25 B ILE 26 n 26 ILE 26 B ASN 27 n 27 ASN 27 B VAL 28 n 28 VAL 28 B ALA 29 n 29 ALA 29 B VAL 30 n 30 VAL 30 B HIS 31 n 31 HIS 31 B VAL 32 n 32 VAL 32 B PHE 33 n 33 PHE 33 B ARG 34 n 34 ARG 34 B LYS 35 n 35 LYS 35 B ALA 36 n 36 ALA 36 B ALA 37 n 37 ALA 37 B ASP 38 n 38 ASP 38 B ASP 39 n 39 ASP 39 B THR 40 n 40 THR 40 B TRP 41 n 41 TRP 41 B GLU 42 n 42 GLU 42 B PRO 43 n 43 PRO 43 B PHE 44 n 44 PHE 44 B ALA 45 n 45 ALA 45 B SER 46 n 46 SER 46 B GLY 47 n 47 GLY 47 B LYS 48 n 48 LYS 48 B THR 49 n 49 THR 49 B SER 50 n 50 SER 50 B GLU 51 n 51 GLU 51 B SER 52 n 52 SER 52 B GLY 53 n 53 GLY 53 B GLU 54 n 54 GLU 54 B LEU 55 n 55 LEU 55 B HIS 56 n 56 HIS 56 B GLY 57 n 57 GLY 57 B LEU 58 n 58 LEU 58 B THR 59 n 59 THR 59 B THR 60 n 60 THR 60 B GLU 61 n 61 GLU 61 B GLU 62 n 62 GLU 62 B GLU 63 n 63 GLU 63 B PHE 64 n 64 PHE 64 B VAL 65 n 65 VAL 65 B GLU 66 n 66 GLU 66 B GLY 67 n 67 GLY 67 B ILE 68 n 68 ILE 68 B TYR 69 n 69 TYR 69 B LYS 70 n 70 LYS 70 B VAL 71 n 71 VAL 71 B GLU 72 n 72 GLU 72 B ILE 73 n 73 ILE 73 B ASP 74 n 74 ASP 74 B THR 75 n 75 THR 75 B LYS 76 n 76 LYS 76 B SER 77 n 77 SER 77 B TYR 78 n 78 TYR 78 B TRP 79 n 79 TRP 79 B LYS 80 n 80 LYS 80 B ALA 81 n 81 ALA 81 B LEU 82 n 82 LEU 82 B GLY 83 n 83 GLY 83 B ILE 84 n 84 ILE 84 B SER 85 n 85 SER 85 B PRO 86 n 86 PRO 86 B PHE 87 n 87 PHE 87 B HIS 88 n 88 HIS 88 B GLU 89 n 89 GLU 89 B HIS 90 n 90 HIS 90 B ALA 91 n 91 ALA 91 B GLU 92 n 92 GLU 92 B VAL 93 n 93 VAL 93 B VAL 94 n 94 VAL 94 B PHE 95 n 95 PHE 95 B THR 96 n 96 THR 96 B ALA 97 n 97 ALA 97 B ASN 98 n 98 ASN 98 B ASP 99 n 99 ASP 99 B SER 100 n 100 SER 100 B GLY 101 n 101 GLY 101 B PRO 102 n 102 PRO 102 B ARG 103 n 103 ARG 103 B ARG 104 n 104 ARG 104 B TYR 105 n 105 TYR 105 B THR 106 n 106 THR 106 B ILE 107 n 107 ILE 107 B ALA 108 n 108 ALA 108 B ALA 109 n 109 ALA 109 B LEU 110 n 110 LEU 110 B LEU 111 n 111 LEU 111 B SER 112 n 112 SER 112 B PRO 113 n 113 PRO 113 B TYR 114 n 114 TYR 114 B SER 115 n 115 SER 115 B TYR 116 n 116 TYR 116 B SER 117 n 117 SER 117 B THR 118 n 118 THR 118 B THR 119 n 119 THR 119 B ALA 120 n 120 ALA 120 B VAL 121 n 121 VAL 121 B VAL 122 n 122 VAL 122 B THR 123 n 123 THR 123 B ASN 124 n 124 ASN 124 B n 125 125 B n 126 126 B n 127 127 B author_and_software_defined_assembly PISA 4 tetrameric gel filtration 6330 15.3 19210 A 4AK 15 modified residue A 4AK 15 LYS B 4AK 15 modified residue B 4AK 15 LYS 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_555 -x,-y,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A O SER 23 A O SER 23 A N ASP 18 A N ASP 18 A N LEU 17 A N LEU 17 A O LEU 111 A O LEU 111 A N SER 112 A N SER 112 A O SER 115 A O SER 115 A N TYR 116 A N TYR 116 B O THR 118 B O THR 118 B O SER 115 B O SER 115 B N SER 112 B N SER 112 B O ILE 107 B O ILE 107 B N MET 13 B N MET 13 B N ASP 18 B N ASP 18 B O SER 23 B O SER 23 A O LEU 55 A O LEU 55 A N VAL 14 A N VAL 14 A N LEU 17 A N LEU 17 A O LEU 111 A O LEU 111 A N SER 112 A N SER 112 A O SER 115 A O SER 115 A N TYR 116 A N TYR 116 B O THR 118 B O THR 118 B O SER 115 B O SER 115 B N SER 112 B N SER 112 B O ILE 107 B O ILE 107 B N MET 13 B N MET 13 B N VAL 14 B N VAL 14 B O LEU 55 B O LEU 55 A O ALA 45 A O ALA 45 A N VAL 32 A N VAL 32 A N HIS 31 A N HIS 31 A O GLU 72 A O GLU 72 A N ILE 73 A N ILE 73 A O ALA 91 A O ALA 91 A N GLU 89 A N GLU 89 B O VAL 94 B O VAL 94 B O ALA 91 B O ALA 91 B N ILE 73 B N ILE 73 B O GLU 72 B O GLU 72 B N HIS 31 B N HIS 31 B N VAL 32 B N VAL 32 B O ALA 45 B O ALA 45 1 A 4AJ 201 C 4AJ 1 A 4AJ 201 C 4AJ 1 A 4AJ 201 C 4AJ 1 A 4AJ 201 C 4AJ 1 B 4AJ 201 D 4AJ 1 B 4AJ 201 D 4AJ 1 B 4AJ 201 D 4AJ 1 B HOH 305 F HOH 1 A GLY 1 A GLY 1 1 Y 1 A PRO 2 A PRO 2 1 Y 1 A THR 3 A THR 3 1 Y 1 A GLY 4 A GLY 4 1 Y 1 A THR 5 A THR 5 1 Y 1 A GLY 6 A GLY 6 1 Y 1 A GLU 7 A GLU 7 1 Y 1 A SER 8 A SER 8 1 Y 1 A LYS 9 A LYS 9 1 Y 1 A LYS 126 A LYS 126 1 Y 1 A GLU 127 A GLU 127 1 Y 1 B GLY 1 B GLY 1 1 Y 1 B PRO 2 B PRO 2 1 Y 1 B THR 3 B THR 3 1 Y 1 B GLY 4 B GLY 4 1 Y 1 B THR 5 B THR 5 1 Y 1 B GLY 6 B GLY 6 1 Y 1 B GLU 7 B GLU 7 1 Y 1 B SER 8 B SER 8 1 Y 1 B LYS 9 B LYS 9 1 Y 1 B PRO 125 B PRO 125 1 Y 1 B LYS 126 B LYS 126 1 Y 1 B GLU 127 B GLU 127 1 Y 1 A B OE1 OE1 GLU GLU 92 92 2.00 1 A A O O HOH HOH 362 394 2.13 1 -19.28 2.10 111.70 92.42 B B B CB CA C PRO PRO PRO 102 102 102 N 1 A A C N VAL 4AK 14 15 0.167 0.023 1.336 1.503 A Y 1 A A C N VAL 4AK 14 15 0.173 0.023 1.336 1.509 B Y 1 A A O O ASP HOH 99 394 2.10 1_555 4_545 20.421 -0.94 0.00 0.00 0.85 0.00 0.08 0.977 0.970 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.17232 0.14575 0.14710 1.25 63.54 3263 61174 5.1 98.99 1.338 0.026 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.042 0.041 0.80 0.80 1.20 2qgb MAXIMUM LIKELIHOOD MASK 1.25 63.54 197 2032 42 0 1793 0.015 0.020 2042 0.000 0.020 1859 1.738 1.985 2822 2.970 3.002 4332 6.095 5.000 274 31.893 24.091 88 14.080 15.000 314 19.002 15.000 10 0.101 0.200 312 0.011 0.021 2344 0.014 0.020 460 2.086 1.627 977 2.024 1.623 976 2.692 2.444 1233 2.707 2.447 1234 3.693 2.121 1065 3.692 2.120 1066 4.146 3.017 1569 7.438 15.858 2344 7.437 15.858 2345 6.560 3.000 3901 59.370 5.000 58 13.420 5.000 3966 0.218 0.230 1.283 219 4141 20 91.73 1.250 38.200 4YDM 64492 64492 0.013 0.032 0.029 1 12.444 25.500 403587 6.300 99.100 0.498 1.250 1.320 1.600 55367 8993 0.215 0.498 1 3.400 6.200 0 95.800 0.318 1.320 1.400 2.400 55113 8787 0.137 0.318 1 5.300 6.300 0 99.200 0.188 1.400 1.490 4.100 54384 8355 0.079 0.188 1 8.700 6.500 0 100.000 0.111 1.490 1.610 6.900 48336 7758 0.048 0.111 1 13.900 6.200 0 99.200 0.070 1.610 1.770 10.800 47656 7220 0.029 0.070 1 21.500 6.600 0 100.000 0.042 1.770 1.980 17.000 39577 6500 0.018 0.042 1 33.400 6.100 0 99.700 0.030 1.980 2.280 22.500 37006 5799 0.013 0.030 1 50.200 6.400 0 99.900 0.026 2.280 2.800 23.600 29192 4936 0.012 0.026 1 55.800 5.900 0 99.800 0.021 2.800 3.950 28.000 23798 3890 0.009 0.021 1 72.100 6.100 0 99.900 0.016 3.950 38.200 31.600 13158 2254 0.007 0.016 1 74.900 5.800 0 99.700 refinement REFMAC 5.8.0049 data scaling SCALA 3.3.15 data extraction PDB_EXTRACT 3.15 High resolution crystal structure of human transthyretin bound to ligand and conjugates of 3-(5-(3,5-dichloro-4-hydroxyphenyl)-1,3,4-oxadiazol-2-yl)phenyl fluorosulfate 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N Tetramer confirmed by by size exclusion chromatography A ASP 74 A ASP 74 HELX_P A LEU 82 A LEU 82 1 AA1 9 B ASP 74 B ASP 74 HELX_P B LEU 82 B LEU 82 1 AA2 9 covale 1.503 both A A VAL 14 A C VAL 14 1_555 A 4AK 15 A N 4AK 15 1_555 covale 1.509 both B A VAL 14 A C VAL 14 1_555 A 4AK 15 A N 4AK 15 1_555 covale 1.330 both A A 4AK 15 A C 4AK 15 1_555 A VAL 16 A N VAL 16 1_555 covale 1.329 both B A 4AK 15 A C 4AK 15 1_555 A VAL 16 A N VAL 16 1_555 covale 1.318 both A B VAL 14 B C VAL 14 1_555 B 4AK 15 B N 4AK 15 1_555 covale 1.330 both B B VAL 14 B C VAL 14 1_555 B 4AK 15 B N 4AK 15 1_555 covale 1.282 both A B 4AK 15 B C 4AK 15 1_555 B VAL 16 B N VAL 16 1_555 covale 1.247 both B B 4AK 15 B C 4AK 15 1_555 B VAL 16 B N VAL 16 1_555 TRANSPORT PROTEIN Transthyretin, hormone transport protein, Thyroxine, retinol, TRANSPORT PROTEIN TTHY_HUMAN UNP 1 21 P02766 GPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE 21 147 4YDM 1 127 P02766 A 1 1 127 21 147 4YDM 1 127 P02766 B 1 1 127 8 8 8 anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A SER 23 A SER 23 A PRO 24 A PRO 24 A LEU 12 A LEU 12 A ASP 18 A ASP 18 A ARG 104 A ARG 104 A SER 112 A SER 112 A SER 115 A SER 115 A THR 123 A THR 123 B SER 115 B SER 115 B THR 123 B THR 123 B ARG 104 B ARG 104 B SER 112 B SER 112 B LEU 12 B LEU 12 B ASP 18 B ASP 18 B SER 23 B SER 23 B PRO 24 B PRO 24 A GLU 54 A GLU 54 A LEU 55 A LEU 55 A LEU 12 A LEU 12 A ASP 18 A ASP 18 A ARG 104 A ARG 104 A SER 112 A SER 112 A SER 115 A SER 115 A THR 123 A THR 123 B SER 115 B SER 115 B THR 123 B THR 123 B ARG 104 B ARG 104 B SER 112 B SER 112 B LEU 12 B LEU 12 B ASP 18 B ASP 18 B GLU 54 B GLU 54 B LEU 55 B LEU 55 A TRP 41 A TRP 41 A LYS 48 A LYS 48 A ALA 29 A ALA 29 A LYS 35 A LYS 35 A GLY 67 A GLY 67 A ILE 73 A ILE 73 A HIS 88 A HIS 88 A ALA 97 A ALA 97 B HIS 88 B HIS 88 B ALA 97 B ALA 97 B GLY 67 B GLY 67 B ILE 73 B ILE 73 B ALA 29 B ALA 29 B LYS 35 B LYS 35 B TRP 41 B TRP 41 B LYS 48 B LYS 48 binding site for residue 4AJ A 201 A 4AJ 201 Software 11 binding site for residue 4AJ B 201 B 4AJ 201 Software 15 A 4AK 15 A 4AK 15 11 2_555 A 4AK 15 A 4AK 15 11 1_555 A LEU 17 A LEU 17 11 2_555 A LEU 17 A LEU 17 11 1_555 A THR 106 A THR 106 11 1_555 A ALA 108 A ALA 108 11 2_555 A SER 117 A SER 117 11 2_555 A SER 117 A SER 117 11 1_555 A THR 118 A THR 118 11 2_555 A THR 118 A THR 118 11 1_555 A VAL 121 A VAL 121 11 1_555 B 4AK 15 B 4AK 15 15 1_555 B 4AK 15 B 4AK 15 15 2_555 B LEU 17 B LEU 17 15 1_555 B LEU 17 B LEU 17 15 2_555 B THR 106 B THR 106 15 2_555 B ALA 108 B ALA 108 15 1_555 B LEU 110 B LEU 110 15 2_555 B LEU 110 B LEU 110 15 1_555 B SER 117 B SER 117 15 2_555 B SER 117 B SER 117 15 1_555 B THR 118 B THR 118 15 2_555 B THR 118 B THR 118 15 1_555 B THR 119 B THR 119 15 2_555 B HOH 305 F HOH 15 2_555 B HOH 305 F HOH 15 1_555 18 P 21 21 2