0.012234
0.007063
0.000000
0.000000
0.014127
0.000000
0.000000
0.000000
0.023492
0.00000
0.00000
0.00000
Ha, N.C.
Kim, J.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
81.738
81.738
42.568
C6 H16 N5 O 1
174.224
n
ARGININEAMIDE
L-peptide linking
C2 H3 O2 -1
59.044
ACETATE ION
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C7 H11 N O5
189.166
N-ACETYL-L-GLUTAMATE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H8 N O6 P
185.072
n
PHOSPHOSERINE
PHOSPHONOSERINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Immunity
IUNIEH
2048
1074-7613
19
341
352
10.1016/S1074-7613(03)00234-6
14499110
The structure of a Bcl-xL/Bim fragment complex: implications for Bim function.
2003
To be published
0353
Complex structure of BCL-XL and mutated BIM BH3 domain
100
1
CCD
2012-11-06
ADSC QUANTUM 270
SINGLE WAVELENGTH
M
x-ray
1
0.97934
1.0
5C (4A)
PAL/PLS
0.97934
SYNCHROTRON
PAL/PLS BEAMLINE 5C (4A)
21925.014
Bcl-2-like protein 1
UNP RESIDUES 2-196
2
man
polymer
2669.820
BH3BIM
2
syn
polymer
59.044
ACETATE ION
3
syn
non-polymer
35.453
CHLORIDE ION
3
syn
non-polymer
18.015
water
117
nat
water
Bcl2-L-1,Apoptosis regulator Bcl-X
no
no
SQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVI
PMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQV
LVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYG
SQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVI
PMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQV
LVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYG
A,F
polypeptide(L)
no
yes
(NLG)IWIAQELRSRGD(SEP)FNAYYA(AAR)
XIWIAQELRSRGDSFNAYYAR
B,G
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Mouse
sample
1
195
Bcl2l1, Bcl2l, Bclx
10090
Mus musculus
562
Escherichia coli
Biological sequence
1.67
26.30
VAPOR DIFFUSION, HANGING DROP
4.6
0.1 M sodium acetate (pH 4.6), 0.01 M calcium chloride and 15% v/v 2-methyl-2,4-pentanediol
287
repository
Initial release
1
0
2016-04-13
N
RCSB
Y
PDBJ
2015-03-04
REL
REL
ACT
ACETATE ION
CL
CHLORIDE ION
HOH
water
32630
synthetic construct
sample
1
21
ACT
1
3
ACT
ACT
201
A
CL
1
4
CL
CL
202
A
CL
2
4
CL
CL
203
A
ACT
1
3
ACT
ACT
204
A
ACT
1
3
ACT
ACT
201
F
CL
2
4
CL
CL
202
F
HOH
51
5
HOH
HOH
301
A
HOH
43
5
HOH
HOH
302
A
HOH
18
5
HOH
HOH
303
A
HOH
92
5
HOH
HOH
304
A
HOH
8
5
HOH
HOH
305
A
HOH
13
5
HOH
HOH
306
A
HOH
1
5
HOH
HOH
307
A
HOH
35
5
HOH
HOH
308
A
HOH
38
5
HOH
HOH
309
A
HOH
98
5
HOH
HOH
310
A
HOH
56
5
HOH
HOH
311
A
HOH
17
5
HOH
HOH
312
A
HOH
160
5
HOH
HOH
313
A
HOH
88
5
HOH
HOH
314
A
HOH
231
5
HOH
HOH
315
A
HOH
47
5
HOH
HOH
316
A
HOH
3
5
HOH
HOH
317
A
HOH
29
5
HOH
HOH
318
A
HOH
255
5
HOH
HOH
319
A
HOH
79
5
HOH
HOH
320
A
HOH
93
5
HOH
HOH
321
A
HOH
50
5
HOH
HOH
322
A
HOH
154
5
HOH
HOH
323
A
HOH
107
5
HOH
HOH
324
A
HOH
64
5
HOH
HOH
325
A
HOH
235
5
HOH
HOH
326
A
HOH
59
5
HOH
HOH
327
A
HOH
180
5
HOH
HOH
328
A
HOH
5
5
HOH
HOH
329
A
HOH
16
5
HOH
HOH
330
A
HOH
20
5
HOH
HOH
331
A
HOH
25
5
HOH
HOH
332
A
HOH
27
5
HOH
HOH
333
A
HOH
28
5
HOH
HOH
334
A
HOH
32
5
HOH
HOH
335
A
HOH
42
5
HOH
HOH
336
A
HOH
46
5
HOH
HOH
337
A
HOH
53
5
HOH
HOH
338
A
HOH
58
5
HOH
HOH
339
A
HOH
102
5
HOH
HOH
340
A
HOH
105
5
HOH
HOH
341
A
HOH
134
5
HOH
HOH
342
A
HOH
138
5
HOH
HOH
343
A
HOH
168
5
HOH
HOH
344
A
HOH
175
5
HOH
HOH
345
A
HOH
198
5
HOH
HOH
346
A
HOH
258
5
HOH
HOH
347
A
HOH
130
5
HOH
HOH
101
B
HOH
94
5
HOH
HOH
102
B
HOH
116
5
HOH
HOH
103
B
HOH
12
5
HOH
HOH
104
B
HOH
31
5
HOH
HOH
105
B
HOH
36
5
HOH
HOH
106
B
HOH
45
5
HOH
HOH
107
B
HOH
74
5
HOH
HOH
108
B
HOH
83
5
HOH
HOH
109
B
HOH
115
5
HOH
HOH
110
B
HOH
122
5
HOH
HOH
111
B
HOH
177
5
HOH
HOH
112
B
HOH
65
5
HOH
HOH
301
F
HOH
140
5
HOH
HOH
302
F
HOH
7
5
HOH
HOH
303
F
HOH
136
5
HOH
HOH
304
F
HOH
21
5
HOH
HOH
305
F
HOH
239
5
HOH
HOH
306
F
HOH
96
5
HOH
HOH
307
F
HOH
108
5
HOH
HOH
308
F
HOH
4
5
HOH
HOH
309
F
HOH
109
5
HOH
HOH
310
F
HOH
66
5
HOH
HOH
311
F
HOH
76
5
HOH
HOH
312
F
HOH
69
5
HOH
HOH
313
F
HOH
2
5
HOH
HOH
314
F
HOH
62
5
HOH
HOH
315
F
HOH
104
5
HOH
HOH
316
F
HOH
170
5
HOH
HOH
317
F
HOH
182
5
HOH
HOH
318
F
HOH
196
5
HOH
HOH
319
F
HOH
193
5
HOH
HOH
320
F
HOH
97
5
HOH
HOH
321
F
HOH
256
5
HOH
HOH
322
F
HOH
6
5
HOH
HOH
323
F
HOH
10
5
HOH
HOH
324
F
HOH
14
5
HOH
HOH
325
F
HOH
15
5
HOH
HOH
326
F
HOH
23
5
HOH
HOH
327
F
HOH
26
5
HOH
HOH
328
F
HOH
30
5
HOH
HOH
329
F
HOH
33
5
HOH
HOH
330
F
HOH
40
5
HOH
HOH
331
F
HOH
48
5
HOH
HOH
332
F
HOH
54
5
HOH
HOH
333
F
HOH
57
5
HOH
HOH
334
F
HOH
60
5
HOH
HOH
335
F
HOH
63
5
HOH
HOH
336
F
HOH
77
5
HOH
HOH
337
F
HOH
81
5
HOH
HOH
338
F
HOH
82
5
HOH
HOH
339
F
HOH
85
5
HOH
HOH
340
F
HOH
87
5
HOH
HOH
341
F
HOH
90
5
HOH
HOH
342
F
HOH
106
5
HOH
HOH
343
F
HOH
110
5
HOH
HOH
344
F
HOH
112
5
HOH
HOH
345
F
HOH
127
5
HOH
HOH
346
F
HOH
133
5
HOH
HOH
347
F
HOH
169
5
HOH
HOH
348
F
HOH
203
5
HOH
HOH
349
F
HOH
234
5
HOH
HOH
350
F
HOH
24
5
HOH
HOH
101
G
HOH
22
5
HOH
HOH
102
G
HOH
162
5
HOH
HOH
103
G
HOH
132
5
HOH
HOH
104
G
HOH
89
5
HOH
HOH
105
G
HOH
41
5
HOH
HOH
106
G
HOH
49
5
HOH
HOH
107
G
HOH
148
5
HOH
HOH
108
G
SER
2
n
1
SER
2
A
GLN
3
n
2
GLN
3
A
SER
4
n
3
SER
4
A
ASN
5
n
4
ASN
5
A
ARG
6
n
5
ARG
6
A
GLU
7
n
6
GLU
7
A
LEU
8
n
7
LEU
8
A
VAL
9
n
8
VAL
9
A
VAL
10
n
9
VAL
10
A
ASP
11
n
10
ASP
11
A
PHE
12
n
11
PHE
12
A
LEU
13
n
12
LEU
13
A
SER
14
n
13
SER
14
A
TYR
15
n
14
TYR
15
A
LYS
16
n
15
LYS
16
A
LEU
17
n
16
LEU
17
A
SER
18
n
17
SER
18
A
GLN
19
n
18
GLN
19
A
LYS
20
n
19
LYS
20
A
GLY
21
n
20
GLY
21
A
TYR
22
n
21
TYR
22
A
SER
23
n
22
SER
23
A
TRP
24
n
23
TRP
24
A
SER
25
n
24
SER
25
A
GLN
26
n
25
GLN
26
A
PHE
27
n
26
PHE
27
A
SER
28
n
27
SER
28
A
ASP
29
n
28
ASP
29
A
VAL
30
n
29
VAL
30
A
n
30
31
A
n
31
32
A
n
32
33
A
n
33
34
A
n
34
35
A
n
35
36
A
n
36
37
A
n
37
38
A
n
38
39
A
n
39
40
A
n
40
41
A
n
41
42
A
n
42
43
A
n
43
44
A
n
44
45
A
n
45
46
A
n
46
47
A
n
47
48
A
n
48
49
A
n
49
50
A
n
50
51
A
n
51
52
A
n
52
53
A
n
53
54
A
n
54
55
A
n
55
56
A
n
56
57
A
n
57
58
A
n
58
59
A
n
59
60
A
n
60
61
A
n
61
62
A
n
62
63
A
n
63
64
A
n
64
65
A
n
65
66
A
n
66
67
A
n
67
68
A
n
68
69
A
n
69
70
A
n
70
71
A
n
71
72
A
n
72
73
A
n
73
74
A
n
74
75
A
n
75
76
A
n
76
77
A
n
77
78
A
n
78
79
A
n
79
80
A
n
80
81
A
n
81
82
A
n
82
83
A
ALA
44
n
83
ALA
84
A
ALA
85
n
84
ALA
85
A
VAL
86
n
85
VAL
86
A
LYS
87
n
86
LYS
87
A
GLN
88
n
87
GLN
88
A
ALA
89
n
88
ALA
89
A
LEU
90
n
89
LEU
90
A
ARG
91
n
90
ARG
91
A
GLU
92
n
91
GLU
92
A
ALA
93
n
92
ALA
93
A
GLY
94
n
93
GLY
94
A
ASP
95
n
94
ASP
95
A
GLU
96
n
95
GLU
96
A
PHE
97
n
96
PHE
97
A
GLU
98
n
97
GLU
98
A
LEU
99
n
98
LEU
99
A
ARG
100
n
99
ARG
100
A
TYR
101
n
100
TYR
101
A
ARG
102
n
101
ARG
102
A
ARG
103
n
102
ARG
103
A
ALA
104
n
103
ALA
104
A
PHE
105
n
104
PHE
105
A
SER
106
n
105
SER
106
A
ASP
107
n
106
ASP
107
A
LEU
108
n
107
LEU
108
A
THR
109
n
108
THR
109
A
SER
110
n
109
SER
110
A
GLN
111
n
110
GLN
111
A
LEU
112
n
111
LEU
112
A
HIS
113
n
112
HIS
113
A
ILE
114
n
113
ILE
114
A
THR
115
n
114
THR
115
A
PRO
116
n
115
PRO
116
A
GLY
117
n
116
GLY
117
A
THR
118
n
117
THR
118
A
ALA
119
n
118
ALA
119
A
TYR
120
n
119
TYR
120
A
GLN
121
n
120
GLN
121
A
SER
122
n
121
SER
122
A
PHE
123
n
122
PHE
123
A
GLU
124
n
123
GLU
124
A
GLN
125
n
124
GLN
125
A
VAL
126
n
125
VAL
126
A
VAL
127
n
126
VAL
127
A
ASN
128
n
127
ASN
128
A
GLU
129
n
128
GLU
129
A
LEU
130
n
129
LEU
130
A
PHE
131
n
130
PHE
131
A
ARG
132
n
131
ARG
132
A
ASP
133
n
132
ASP
133
A
GLY
134
n
133
GLY
134
A
VAL
135
n
134
VAL
135
A
ASN
136
n
135
ASN
136
A
TRP
137
n
136
TRP
137
A
GLY
138
n
137
GLY
138
A
ARG
139
n
138
ARG
139
A
ILE
140
n
139
ILE
140
A
VAL
141
n
140
VAL
141
A
ALA
142
n
141
ALA
142
A
PHE
143
n
142
PHE
143
A
PHE
144
n
143
PHE
144
A
SER
145
n
144
SER
145
A
PHE
146
n
145
PHE
146
A
GLY
147
n
146
GLY
147
A
GLY
148
n
147
GLY
148
A
ALA
149
n
148
ALA
149
A
LEU
150
n
149
LEU
150
A
CYS
151
n
150
CYS
151
A
VAL
152
n
151
VAL
152
A
GLU
153
n
152
GLU
153
A
SER
154
n
153
SER
154
A
VAL
155
n
154
VAL
155
A
ASP
156
n
155
ASP
156
A
LYS
157
n
156
LYS
157
A
GLU
158
n
157
GLU
158
A
MET
159
n
158
MET
159
A
GLN
160
n
159
GLN
160
A
VAL
161
n
160
VAL
161
A
LEU
162
n
161
LEU
162
A
VAL
163
n
162
VAL
163
A
SER
164
n
163
SER
164
A
ARG
165
n
164
ARG
165
A
ILE
166
n
165
ILE
166
A
ALA
167
n
166
ALA
167
A
SER
168
n
167
SER
168
A
TRP
169
n
168
TRP
169
A
MET
170
n
169
MET
170
A
ALA
171
n
170
ALA
171
A
THR
172
n
171
THR
172
A
TYR
173
n
172
TYR
173
A
LEU
174
n
173
LEU
174
A
ASN
175
n
174
ASN
175
A
ASP
176
n
175
ASP
176
A
HIS
177
n
176
HIS
177
A
LEU
178
n
177
LEU
178
A
GLU
179
n
178
GLU
179
A
PRO
180
n
179
PRO
180
A
TRP
181
n
180
TRP
181
A
ILE
182
n
181
ILE
182
A
GLN
183
n
182
GLN
183
A
GLU
184
n
183
GLU
184
A
ASN
185
n
184
ASN
185
A
GLY
186
n
185
GLY
186
A
GLY
187
n
186
GLY
187
A
TRP
188
n
187
TRP
188
A
ASP
189
n
188
ASP
189
A
THR
190
n
189
THR
190
A
PHE
191
n
190
PHE
191
A
VAL
192
n
191
VAL
192
A
ASP
193
n
192
ASP
193
A
LEU
194
n
193
LEU
194
A
TYR
195
n
194
TYR
195
A
GLY
196
n
195
GLY
196
A
NLG
1
n
1
NLG
1
B
ILE
2
n
2
ILE
2
B
TRP
3
n
3
TRP
3
B
ILE
4
n
4
ILE
4
B
ALA
5
n
5
ALA
5
B
GLN
6
n
6
GLN
6
B
GLU
7
n
7
GLU
7
B
LEU
8
n
8
LEU
8
B
ARG
9
n
9
ARG
9
B
SER
10
n
10
SER
10
B
ARG
11
n
11
ARG
11
B
GLY
12
n
12
GLY
12
B
ASP
13
n
13
ASP
13
B
SEP
14
n
14
SEP
14
B
PHE
15
n
15
PHE
15
B
ASN
16
n
16
ASN
16
B
ALA
17
n
17
ALA
17
B
TYR
18
n
18
TYR
18
B
TYR
19
n
19
TYR
19
B
ALA
20
n
20
ALA
20
B
ARN
21
n
21
AAR
21
B
SER
2
n
1
SER
2
F
GLN
3
n
2
GLN
3
F
SER
4
n
3
SER
4
F
ASN
5
n
4
ASN
5
F
ARG
6
n
5
ARG
6
F
GLU
7
n
6
GLU
7
F
LEU
8
n
7
LEU
8
F
VAL
9
n
8
VAL
9
F
VAL
10
n
9
VAL
10
F
ASP
11
n
10
ASP
11
F
PHE
12
n
11
PHE
12
F
LEU
13
n
12
LEU
13
F
SER
14
n
13
SER
14
F
TYR
15
n
14
TYR
15
F
LYS
16
n
15
LYS
16
F
LEU
17
n
16
LEU
17
F
SER
18
n
17
SER
18
F
GLN
19
n
18
GLN
19
F
LYS
20
n
19
LYS
20
F
GLY
21
n
20
GLY
21
F
TYR
22
n
21
TYR
22
F
SER
23
n
22
SER
23
F
TRP
24
n
23
TRP
24
F
SER
25
n
24
SER
25
F
GLN
26
n
25
GLN
26
F
PHE
27
n
26
PHE
27
F
SER
28
n
27
SER
28
F
ASP
29
n
28
ASP
29
F
VAL
30
n
29
VAL
30
F
n
30
31
F
n
31
32
F
n
32
33
F
n
33
34
F
n
34
35
F
n
35
36
F
n
36
37
F
n
37
38
F
n
38
39
F
n
39
40
F
n
40
41
F
n
41
42
F
n
42
43
F
n
43
44
F
n
44
45
F
n
45
46
F
n
46
47
F
n
47
48
F
n
48
49
F
n
49
50
F
n
50
51
F
n
51
52
F
n
52
53
F
n
53
54
F
n
54
55
F
n
55
56
F
n
56
57
F
n
57
58
F
n
58
59
F
n
59
60
F
n
60
61
F
n
61
62
F
n
62
63
F
n
63
64
F
n
64
65
F
n
65
66
F
n
66
67
F
n
67
68
F
n
68
69
F
n
69
70
F
n
70
71
F
n
71
72
F
n
72
73
F
n
73
74
F
n
74
75
F
n
75
76
F
n
76
77
F
n
77
78
F
n
78
79
F
n
79
80
F
n
80
81
F
n
81
82
F
n
82
83
F
ALA
44
n
83
ALA
84
F
ALA
85
n
84
ALA
85
F
VAL
86
n
85
VAL
86
F
LYS
87
n
86
LYS
87
F
GLN
88
n
87
GLN
88
F
ALA
89
n
88
ALA
89
F
LEU
90
n
89
LEU
90
F
ARG
91
n
90
ARG
91
F
GLU
92
n
91
GLU
92
F
ALA
93
n
92
ALA
93
F
GLY
94
n
93
GLY
94
F
ASP
95
n
94
ASP
95
F
GLU
96
n
95
GLU
96
F
PHE
97
n
96
PHE
97
F
GLU
98
n
97
GLU
98
F
LEU
99
n
98
LEU
99
F
ARG
100
n
99
ARG
100
F
TYR
101
n
100
TYR
101
F
ARG
102
n
101
ARG
102
F
ARG
103
n
102
ARG
103
F
ALA
104
n
103
ALA
104
F
PHE
105
n
104
PHE
105
F
SER
106
n
105
SER
106
F
ASP
107
n
106
ASP
107
F
LEU
108
n
107
LEU
108
F
THR
109
n
108
THR
109
F
SER
110
n
109
SER
110
F
GLN
111
n
110
GLN
111
F
LEU
112
n
111
LEU
112
F
HIS
113
n
112
HIS
113
F
ILE
114
n
113
ILE
114
F
THR
115
n
114
THR
115
F
PRO
116
n
115
PRO
116
F
GLY
117
n
116
GLY
117
F
THR
118
n
117
THR
118
F
ALA
119
n
118
ALA
119
F
TYR
120
n
119
TYR
120
F
GLN
121
n
120
GLN
121
F
SER
122
n
121
SER
122
F
PHE
123
n
122
PHE
123
F
GLU
124
n
123
GLU
124
F
GLN
125
n
124
GLN
125
F
VAL
126
n
125
VAL
126
F
VAL
127
n
126
VAL
127
F
ASN
128
n
127
ASN
128
F
GLU
129
n
128
GLU
129
F
LEU
130
n
129
LEU
130
F
PHE
131
n
130
PHE
131
F
ARG
132
n
131
ARG
132
F
ASP
133
n
132
ASP
133
F
GLY
134
n
133
GLY
134
F
VAL
135
n
134
VAL
135
F
ASN
136
n
135
ASN
136
F
TRP
137
n
136
TRP
137
F
GLY
138
n
137
GLY
138
F
ARG
139
n
138
ARG
139
F
ILE
140
n
139
ILE
140
F
VAL
141
n
140
VAL
141
F
ALA
142
n
141
ALA
142
F
PHE
143
n
142
PHE
143
F
PHE
144
n
143
PHE
144
F
SER
145
n
144
SER
145
F
PHE
146
n
145
PHE
146
F
GLY
147
n
146
GLY
147
F
GLY
148
n
147
GLY
148
F
ALA
149
n
148
ALA
149
F
LEU
150
n
149
LEU
150
F
CYS
151
n
150
CYS
151
F
VAL
152
n
151
VAL
152
F
GLU
153
n
152
GLU
153
F
SER
154
n
153
SER
154
F
VAL
155
n
154
VAL
155
F
ASP
156
n
155
ASP
156
F
LYS
157
n
156
LYS
157
F
GLU
158
n
157
GLU
158
F
MET
159
n
158
MET
159
F
GLN
160
n
159
GLN
160
F
VAL
161
n
160
VAL
161
F
LEU
162
n
161
LEU
162
F
VAL
163
n
162
VAL
163
F
SER
164
n
163
SER
164
F
ARG
165
n
164
ARG
165
F
ILE
166
n
165
ILE
166
F
ALA
167
n
166
ALA
167
F
SER
168
n
167
SER
168
F
TRP
169
n
168
TRP
169
F
MET
170
n
169
MET
170
F
ALA
171
n
170
ALA
171
F
THR
172
n
171
THR
172
F
TYR
173
n
172
TYR
173
F
LEU
174
n
173
LEU
174
F
ASN
175
n
174
ASN
175
F
ASP
176
n
175
ASP
176
F
HIS
177
n
176
HIS
177
F
LEU
178
n
177
LEU
178
F
GLU
179
n
178
GLU
179
F
PRO
180
n
179
PRO
180
F
TRP
181
n
180
TRP
181
F
ILE
182
n
181
ILE
182
F
GLN
183
n
182
GLN
183
F
GLU
184
n
183
GLU
184
F
ASN
185
n
184
ASN
185
F
GLY
186
n
185
GLY
186
F
GLY
187
n
186
GLY
187
F
TRP
188
n
187
TRP
188
F
ASP
189
n
188
ASP
189
F
THR
190
n
189
THR
190
F
PHE
191
n
190
PHE
191
F
VAL
192
n
191
VAL
192
F
ASP
193
n
192
ASP
193
F
LEU
194
n
193
LEU
194
F
TYR
195
n
194
TYR
195
F
GLY
196
n
195
GLY
196
F
NLG
1
n
1
NLG
1
G
ILE
2
n
2
ILE
2
G
TRP
3
n
3
TRP
3
G
ILE
4
n
4
ILE
4
G
ALA
5
n
5
ALA
5
G
GLN
6
n
6
GLN
6
G
GLU
7
n
7
GLU
7
G
LEU
8
n
8
LEU
8
G
ARG
9
n
9
ARG
9
G
SER
10
n
10
SER
10
G
ARG
11
n
11
ARG
11
G
GLY
12
n
12
GLY
12
G
ASP
13
n
13
ASP
13
G
SEP
14
n
14
SEP
14
G
PHE
15
n
15
PHE
15
G
ASN
16
n
16
ASN
16
G
ALA
17
n
17
ALA
17
G
TYR
18
n
18
TYR
18
G
TYR
19
n
19
TYR
19
G
ALA
20
n
20
ALA
20
G
ARN
21
n
21
AAR
21
G
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
2810
-36
8040
2940
-24
7940
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
GLU
31
A
GLU
30
1
Y
1
A
GLU
32
A
GLU
31
1
Y
1
A
ASN
33
A
ASN
32
1
Y
1
A
ARG
34
A
ARG
33
1
Y
1
A
THR
35
A
THR
34
1
Y
1
A
GLU
36
A
GLU
35
1
Y
1
A
ALA
37
A
ALA
36
1
Y
1
A
PRO
38
A
PRO
37
1
Y
1
A
GLU
39
A
GLU
38
1
Y
1
A
GLU
40
A
GLU
39
1
Y
1
A
THR
41
A
THR
40
1
Y
1
A
GLU
42
A
GLU
41
1
Y
1
A
ALA
43
A
ALA
42
1
Y
1
A
GLU
44
A
GLU
43
1
Y
1
A
ARG
45
A
ARG
44
1
Y
1
A
GLU
46
A
GLU
45
1
Y
1
A
THR
47
A
THR
46
1
Y
1
A
PRO
48
A
PRO
47
1
Y
1
A
SER
49
A
SER
48
1
Y
1
A
ALA
50
A
ALA
49
1
Y
1
A
ILE
51
A
ILE
50
1
Y
1
A
ASN
52
A
ASN
51
1
Y
1
A
GLY
53
A
GLY
52
1
Y
1
A
ASN
54
A
ASN
53
1
Y
1
A
PRO
55
A
PRO
54
1
Y
1
A
SER
56
A
SER
55
1
Y
1
A
TRP
57
A
TRP
56
1
Y
1
A
HIS
58
A
HIS
57
1
Y
1
A
LEU
59
A
LEU
58
1
Y
1
A
ALA
60
A
ALA
59
1
Y
1
A
ASP
61
A
ASP
60
1
Y
1
A
SER
62
A
SER
61
1
Y
1
A
PRO
63
A
PRO
62
1
Y
1
A
ALA
64
A
ALA
63
1
Y
1
A
VAL
65
A
VAL
64
1
Y
1
A
ASN
66
A
ASN
65
1
Y
1
A
GLY
67
A
GLY
66
1
Y
1
A
ALA
68
A
ALA
67
1
Y
1
A
THR
69
A
THR
68
1
Y
1
A
GLY
70
A
GLY
69
1
Y
1
A
HIS
71
A
HIS
70
1
Y
1
A
SER
72
A
SER
71
1
Y
1
A
SER
73
A
SER
72
1
Y
1
A
SER
74
A
SER
73
1
Y
1
A
LEU
75
A
LEU
74
1
Y
1
A
ASP
76
A
ASP
75
1
Y
1
A
ALA
77
A
ALA
76
1
Y
1
A
ARG
78
A
ARG
77
1
Y
1
A
GLU
79
A
GLU
78
1
Y
1
A
VAL
80
A
VAL
79
1
Y
1
A
ILE
81
A
ILE
80
1
Y
1
A
PRO
82
A
PRO
81
1
Y
1
A
MET
83
A
MET
82
1
Y
1
F
GLU
31
C
GLU
30
1
Y
1
F
GLU
32
C
GLU
31
1
Y
1
F
ASN
33
C
ASN
32
1
Y
1
F
ARG
34
C
ARG
33
1
Y
1
F
THR
35
C
THR
34
1
Y
1
F
GLU
36
C
GLU
35
1
Y
1
F
ALA
37
C
ALA
36
1
Y
1
F
PRO
38
C
PRO
37
1
Y
1
F
GLU
39
C
GLU
38
1
Y
1
F
GLU
40
C
GLU
39
1
Y
1
F
THR
41
C
THR
40
1
Y
1
F
GLU
42
C
GLU
41
1
Y
1
F
ALA
43
C
ALA
42
1
Y
1
F
GLU
44
C
GLU
43
1
Y
1
F
ARG
45
C
ARG
44
1
Y
1
F
GLU
46
C
GLU
45
1
Y
1
F
THR
47
C
THR
46
1
Y
1
F
PRO
48
C
PRO
47
1
Y
1
F
SER
49
C
SER
48
1
Y
1
F
ALA
50
C
ALA
49
1
Y
1
F
ILE
51
C
ILE
50
1
Y
1
F
ASN
52
C
ASN
51
1
Y
1
F
GLY
53
C
GLY
52
1
Y
1
F
ASN
54
C
ASN
53
1
Y
1
F
PRO
55
C
PRO
54
1
Y
1
F
SER
56
C
SER
55
1
Y
1
F
TRP
57
C
TRP
56
1
Y
1
F
HIS
58
C
HIS
57
1
Y
1
F
LEU
59
C
LEU
58
1
Y
1
F
ALA
60
C
ALA
59
1
Y
1
F
ASP
61
C
ASP
60
1
Y
1
F
SER
62
C
SER
61
1
Y
1
F
PRO
63
C
PRO
62
1
Y
1
F
ALA
64
C
ALA
63
1
Y
1
F
VAL
65
C
VAL
64
1
Y
1
F
ASN
66
C
ASN
65
1
Y
1
F
GLY
67
C
GLY
66
1
Y
1
F
ALA
68
C
ALA
67
1
Y
1
F
THR
69
C
THR
68
1
Y
1
F
GLY
70
C
GLY
69
1
Y
1
F
HIS
71
C
HIS
70
1
Y
1
F
SER
72
C
SER
71
1
Y
1
F
SER
73
C
SER
72
1
Y
1
F
SER
74
C
SER
73
1
Y
1
F
LEU
75
C
LEU
74
1
Y
1
F
ASP
76
C
ASP
75
1
Y
1
F
ALA
77
C
ALA
76
1
Y
1
F
ARG
78
C
ARG
77
1
Y
1
F
GLU
79
C
GLU
78
1
Y
1
F
VAL
80
C
VAL
79
1
Y
1
F
ILE
81
C
ILE
80
1
Y
1
F
PRO
82
C
PRO
81
1
Y
1
F
MET
83
C
MET
82
1
Y
0.2275
0.1923
0.1941
1.700
19.633
1745
34825
5.01
99.55
0.26
1
FREE R-VALUE
2.05
24.26
0.90
1.11
ML
FLAT BULK SOLVENT MODEL
1.700
19.633
117
2812
15
0
2680
0.007
2767
1.177
3747
16.797
998
0.072
376
0.004
489
0.3789
0.3467
1.7500
146
2674
98.00
0.3385
0.3090
1.8064
135
2806
99.00
0.2903
0.2816
1.8710
137
2743
99.00
0.2933
0.2415
1.9458
136
2768
99.00
0.2823
0.2214
2.0343
154
2750
100.00
0.2674
0.2032
2.1414
151
2775
100.00
0.2116
0.1662
2.2754
161
2722
100.00
0.1985
0.1710
2.4508
125
2772
100.00
0.2264
0.1736
2.6968
141
2784
100.00
0.2287
0.1703
3.0858
153
2762
100.00
0.1831
0.1576
3.8828
165
2767
100.00
0.1774
0.1643
19.6341
141
2757
100.00
1.65
50
4YK9
37932
1
2.08
6.4
99.2
refinement
PHENIX
(phenix.refine: 1.8.2_1309)
data processing
HKL-2000
model building
Coot
phasing
MOLREP
BCL-XL, BH3BIM
Complex structure of BCL-XL and mutated BIM BH3 domain
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
3
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
A
SER
2
A
SER
1
HELX_P
A
GLN
19
A
GLN
18
1
AA1
18
A
SER
23
A
SER
22
HELX_P
A
SER
28
A
SER
27
1
AA2
6
A
ALA
85
A
ALA
84
HELX_P
A
TYR
101
A
TYR
100
1
AA3
17
A
TYR
101
A
TYR
100
HELX_P
A
LEU
112
A
LEU
111
1
AA4
12
A
THR
118
A
THR
117
HELX_P
A
PHE
131
A
PHE
130
1
AA5
14
A
ASN
136
A
ASN
135
HELX_P
A
LYS
157
A
LYS
156
1
AA6
22
A
VAL
161
A
VAL
160
HELX_P
A
LEU
178
A
LEU
177
1
AA7
18
A
LEU
178
A
LEU
177
HELX_P
A
ASN
185
A
ASN
184
1
AA8
8
A
GLY
186
A
GLY
185
HELX_P
A
GLY
196
A
GLY
195
1
AA9
11
B
ILE
2
B
ILE
2
HELX_P
B
ALA
20
B
ALA
20
1
AB1
19
F
GLN
3
C
GLN
2
HELX_P
F
LYS
20
C
LYS
19
1
AB2
18
F
SER
23
C
SER
22
HELX_P
F
SER
28
C
SER
27
1
AB3
6
F
ALA
85
C
ALA
84
HELX_P
F
TYR
101
C
TYR
100
1
AB4
17
F
TYR
101
C
TYR
100
HELX_P
F
LEU
112
C
LEU
111
1
AB5
12
F
THR
118
C
THR
117
HELX_P
F
PHE
131
C
PHE
130
1
AB6
14
F
ASN
136
C
ASN
135
HELX_P
F
LYS
157
C
LYS
156
1
AB7
22
F
VAL
161
C
VAL
160
HELX_P
F
LEU
178
C
LEU
177
1
AB8
18
F
LEU
178
C
LEU
177
HELX_P
F
ASN
185
C
ASN
184
1
AB9
8
F
GLY
186
C
GLY
185
HELX_P
F
GLY
196
C
GLY
195
1
AC1
11
G
ILE
2
D
ILE
2
HELX_P
G
ALA
20
D
ALA
20
1
AC2
19
covale
1.330
both
B
NLG
1
B
C
NLG
1
1_555
B
ILE
2
B
N
ILE
2
1_555
covale
1.327
both
B
ASP
13
B
C
ASP
13
1_555
B
SEP
14
B
N
SEP
14
1_555
covale
1.328
both
B
SEP
14
B
C
SEP
14
1_555
B
PHE
15
B
N
PHE
15
1_555
covale
1.327
both
B
ALA
20
B
C
ALA
20
1_555
B
AAR
21
B
N
AAR
21
1_555
covale
1.330
both
G
NLG
1
D
C
NLG
1
1_555
G
ILE
2
D
N
ILE
2
1_555
covale
1.325
both
G
ASP
13
D
C
ASP
13
1_555
G
SEP
14
D
N
SEP
14
1_555
covale
1.330
both
G
SEP
14
D
C
SEP
14
1_555
G
PHE
15
D
N
PHE
15
1_555
covale
1.332
both
G
ALA
20
D
C
ALA
20
1_555
G
AAR
21
D
N
AAR
21
1_555
APOPTOSIS
BCL-XL, BIM, BH3, complex, APOPTOSIS
B2CL1_MOUSE
UNP
1
2
Q64373
SQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVI
PMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQV
LVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYG
4YK9
PDB
2
1
4YK9
2
196
4YK9
2
196
Q64373
A
1
1
195
1
21
4YK9
1
21
4YK9
B
2
1
21
2
196
4YK9
2
196
Q64373
F
1
1
195
1
21
4YK9
1
21
4YK9
G
2
1
21
binding site for residue ACT A 201
A
ACT
201
Software
6
binding site for residue CL A 202
A
CL
202
Software
4
binding site for residue CL A 203
A
CL
203
Software
1
binding site for residue ACT A 204
A
ACT
204
Software
7
binding site for residue ACT F 201
F
ACT
201
Software
2
binding site for residue CL F 202
F
CL
202
Software
4
binding site for Di-peptide NLG G 1 and ILE G 2
G
NLG
1
Software
10
binding site for Di-peptide ASP G 13 and SEP G 14
G
ASP
13
Software
16
binding site for Di-peptide SEP G 14 and PHE G 15
G
SEP
14
Software
14
binding site for Di-peptide ALA G 20 and AAR G 21
G
ALA
20
Software
12
A
ARG
100
A
ARG
99
6
1_555
A
TYR
101
A
TYR
100
6
1_555
B
SEP
14
B
SEP
14
6
1_555
B
PHE
15
B
PHE
15
6
1_555
F
THR
109
C
THR
108
6
1_555
F
HOH
338
M
HOH
6
1_555
A
ASP
107
A
ASP
106
4
1_555
A
HOH
301
K
HOH
4
1_555
B
GLU
7
B
GLU
7
4
1_555
F
TYR
22
C
TYR
21
4
1_555
A
ARG
132
A
ARG
131
1
1_555
A
THR
109
A
THR
108
7
1_555
A
SER
110
A
SER
109
7
1_555
A
HOH
312
K
HOH
7
1_555
F
ARG
100
C
ARG
99
7
1_554
F
TYR
101
C
TYR
100
7
1_554
G
SEP
14
D
SEP
14
7
1_554
G
PHE
15
D
PHE
15
7
1_554
F
ASN
136
C
ASN
135
2
1_555
F
ARG
139
C
ARG
138
2
1_555
A
TYR
22
A
TYR
21
4
1_556
A
HOH
320
K
HOH
4
1_556
F
ASP
107
C
ASP
106
4
1_555
G
GLU
7
D
GLU
7
4
1_555
F
GLN
111
C
GLN
110
10
1_555
F
LEU
112
C
LEU
111
10
1_555
F
SER
122
C
SER
121
10
1_555
F
GLN
125
C
GLN
124
10
1_555
F
VAL
126
C
VAL
125
10
1_555
F
ASN
128
C
ASN
127
10
3_555
G
TRP
3
D
TRP
3
10
1_555
G
ILE
4
D
ILE
4
10
1_555
G
ALA
5
D
ALA
5
10
1_555
G
GLN
6
D
GLN
6
10
1_555
A
ARG
102
A
ARG
101
16
1_556
A
ACT
204
H
ACT
16
1_556
A
HOH
312
K
HOH
16
1_556
F
TYR
101
C
TYR
100
16
1_555
F
ASN
136
C
ASN
135
16
1_555
F
ARG
139
C
ARG
138
16
1_555
F
HOH
303
M
HOH
16
1_556
G
ARG
9
D
ARG
9
16
1_555
G
SER
10
D
SER
10
16
1_555
G
ARG
11
D
ARG
11
16
1_555
G
GLY
12
D
GLY
12
16
1_555
G
PHE
15
D
PHE
15
16
1_555
G
ASN
16
D
ASN
16
16
1_555
G
ALA
17
D
ALA
17
16
1_555
G
TYR
18
D
TYR
18
16
1_555
G
HOH
108
N
HOH
16
1_555
A
ARG
102
A
ARG
101
14
1_556
A
ACT
204
H
ACT
14
1_556
A
HOH
312
K
HOH
14
1_556
F
TYR
101
C
TYR
100
14
1_555
F
TYR
195
C
TYR
194
14
1_555
F
HOH
303
M
HOH
14
1_556
G
SER
10
D
SER
10
14
1_555
G
ARG
11
D
ARG
11
14
1_555
G
GLY
12
D
GLY
12
14
1_555
G
ASP
13
D
ASP
13
14
1_555
G
ASN
16
D
ASN
16
14
1_555
G
ALA
17
D
ALA
17
14
1_555
G
TYR
18
D
TYR
18
14
1_555
G
TYR
19
D
TYR
19
14
1_555
F
SER
25
C
SER
24
12
1_556
F
GLN
26
C
GLN
25
12
1_556
F
PHE
27
C
PHE
26
12
1_556
F
SER
28
C
SER
27
12
1_556
F
ASP
29
C
ASP
28
12
1_556
F
GLN
160
C
GLN
159
12
1_556
F
ASP
193
C
ASP
192
12
1_555
G
ASN
16
D
ASN
16
12
1_555
G
TYR
18
D
TYR
18
12
1_555
G
TYR
19
D
TYR
19
12
1_555
G
HOH
102
N
HOH
12
1_555
G
HOH
107
N
HOH
12
1_555
143
P 3