data_4YMC # _entry.id 4YMC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.284 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4YMC WWPDB D_1000207698 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Intercalation of lambda-[Ru(phen)2(dppz)]2+ into d(CCGGTACCGG)2' 3U38 unspecified PDB 'Lambda-[Ru(phen)2(dppz)]2+ bound to d(CCGGATCCGG)2' 4E7Y unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4YMC _pdbx_database_status.recvd_initial_deposition_date 2015-03-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gurung, S.P.' 1 'Hall, J.P.' 2 'Cardin, C.J.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Reversal of a single base pair step controls guanine photo-oxidation by an intercalating Ru(II) dipyridophenazine complex.' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Keane, P.M.' 1 primary 'Gurung, S.P.' 2 primary 'Niyazi, H.' 3 primary 'Poynton, F.E.' 4 primary 'Hall, J.P.' 5 primary 'Sazanovich, I.V.' 6 primary 'Towrie, M.' 7 primary 'Teixeira, S.' 8 primary 'Mitchell, E.' 9 primary 'Forsyth, T.' 10 primary 'Gunnlaugsson, T.' 11 primary 'Quinn, S.J.' 12 primary 'Cardin, C.J.' 13 primary 'Kelly, J.M.' 14 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 4YMC _cell.details ? _cell.formula_units_Z ? _cell.length_a 47.380 _cell.length_a_esd ? _cell.length_b 47.380 _cell.length_b_esd ? _cell.length_c 33.830 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YMC _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*GP*GP*AP*TP*CP*CP*GP*G)-3') ; 3045.992 1 ? ? ? ? 2 non-polymer syn 'BARIUM ION' 137.327 1 ? ? ? ? 3 non-polymer syn 'Ru(tap)2(dppz) complex' 747.732 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 water nat water 18.015 20 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DG)(DG)(DA)(DT)(DC)(DC)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCGGATCCGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DG n 1 5 DA n 1 6 DT n 1 7 DC n 1 8 DC n 1 9 DG n 1 10 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4YMC _struct_ref.pdbx_db_accession 4YMC _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4YMC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 10 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4YMC _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 10 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight BA non-polymer . 'BARIUM ION' ? 'Ba 2' 137.327 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 RKL non-polymer . 'Ru(tap)2(dppz) complex' ? 'C38 H22 N12 Ru 2' 747.732 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4YMC _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.12 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 60.53 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;The crystals were grown, using the sitting drop method, by adding 1 uL of 2mM d(CCGGATCCGG) and 1 uL 4 mM rac-[Ru(TAP)2(dppz)].2Cl to 6 uL of a solution containing 10% (v/v) 2-methyl-2,4-pentanediol, 12 mM spermine-tetraHCL, 20mM BaCl2, 80mM KCl and 40 mM Na-cacodylate pH 7. This was equilibrated, at 18 C, against 500 uL 2-methyl-2,4-pentanediol. ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-02-28 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97949 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I02' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97949 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I02 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4YMC _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.88 _reflns.d_resolution_low 33.83 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 3423 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.7 _reflns.pdbx_Rmerge_I_obs 0.052 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.020 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 21.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.88 _reflns_shell.d_res_low 1.93 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.436 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 12.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.95 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][2] 0.95 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] -1.90 _refine.B_iso_max ? _refine.B_iso_mean 46.469 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.973 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4YMC _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.88 _refine.ls_d_res_low 33.83 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 3250 _refine.ls_number_reflns_R_free 149 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.85 _refine.ls_percent_reflns_R_free 4.4 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.20028 _refine.ls_R_factor_R_free 0.25736 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.19792 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.135 _refine.pdbx_overall_ESU_R_Free 0.143 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 4.915 _refine.overall_SU_ML 0.138 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 202 _refine_hist.pdbx_number_atoms_ligand 53 _refine_hist.number_atoms_solvent 20 _refine_hist.number_atoms_total 275 _refine_hist.d_res_high 1.88 _refine_hist.d_res_low 33.83 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.015 0.013 290 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.030 0.020 134 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.681 1.598 456 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 4.372 3.000 308 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.110 0.200 30 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.023 0.020 174 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 76 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 4.376 4.667 290 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 4.308 4.667 289 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 6.167 6.982 457 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 5.361 48.142 630 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 5.372 48.141 626 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.880 _refine_ls_shell.d_res_low 1.929 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 11 _refine_ls_shell.number_reflns_R_work 223 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.320 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.258 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 4YMC _struct.title 'Lambda-[Ru(TAP)2(dppz)]2+ bound to d(CCGGATCCGG)2' _struct.pdbx_descriptor ;DNA (5'-D(*CP*CP*GP*GP*AP*TP*CP*CP*GP*G)-3') ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4YMC _struct_keywords.text 'ruthenium, complex, DNA, intercalation' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A DG 4 O6 ? ? ? 1_555 B BA . BA ? ? A DG 4 A BA 101 1_555 ? ? ? ? ? ? ? 2.813 ? metalc2 metalc ? ? B BA . BA ? ? ? 1_555 E HOH . O ? ? A BA 101 A HOH 204 1_555 ? ? ? ? ? ? ? 2.775 ? metalc3 metalc ? ? B BA . BA ? ? ? 1_555 E HOH . O ? ? A BA 101 A HOH 202 1_555 ? ? ? ? ? ? ? 2.994 ? metalc4 metalc ? ? B BA . BA ? ? ? 1_555 E HOH . O ? ? A BA 101 A HOH 208 1_555 ? ? ? ? ? ? ? 2.841 ? metalc5 metalc ? ? B BA . BA ? ? ? 1_555 E HOH . O ? ? A BA 101 A HOH 210 1_555 ? ? ? ? ? ? ? 2.918 ? metalc6 metalc ? ? B BA . BA ? ? ? 1_555 E HOH . O ? ? A BA 101 A HOH 205 7_555 ? ? ? ? ? ? ? 2.758 ? hydrog1 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 10 O6 ? ? A DC 1 A DG 10 7_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? hydrog2 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 9 N1 ? ? A DC 2 A DG 9 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 9 O6 ? ? A DC 2 A DG 9 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 9 N2 ? ? A DC 2 A DG 9 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 3 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 3 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 3 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 7 N3 ? ? A DG 4 A DC 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC 7 O2 ? ? A DG 4 A DC 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC 7 N4 ? ? A DG 4 A DC 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A DT 6 N3 ? ? A DA 5 A DT 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DT 6 O4 ? ? A DA 5 A DT 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? A DT 6 N3 ? ? ? 1_555 A DA 5 N1 ? ? A DT 6 A DA 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? A DT 6 O4 ? ? ? 1_555 A DA 5 N6 ? ? A DT 6 A DA 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DG 4 N1 ? ? A DC 7 A DG 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DG 4 O6 ? ? A DC 7 A DG 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A DG 4 N2 ? ? A DC 7 A DG 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 3 N1 ? ? A DC 8 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 3 O6 ? ? A DC 8 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 3 N2 ? ? A DC 8 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 9 A DC 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 9 A DC 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 9 A DC 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DC 1 N4 ? ? A DG 10 A DC 1 7_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A BA 101 ? 8 'binding site for residue BA A 101' AC2 Software A RKL 102 ? 10 'binding site for residue RKL A 102' AC3 Software A CL 103 ? 3 'binding site for residue CL A 103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 DG A 3 ? DG A 3 . ? 1_555 ? 2 AC1 8 DG A 4 ? DG A 4 . ? 1_555 ? 3 AC1 8 HOH E . ? HOH A 204 . ? 1_555 ? 4 AC1 8 HOH E . ? HOH A 205 . ? 7_555 ? 5 AC1 8 HOH E . ? HOH A 210 . ? 1_555 ? 6 AC1 8 HOH E . ? HOH A 219 . ? 1_555 ? 7 AC1 8 HOH E . ? HOH A 202 . ? 1_555 ? 8 AC1 8 HOH E . ? HOH A 208 . ? 1_555 ? 9 AC2 10 DC A 1 ? DC A 1 . ? 3_544 ? 10 AC2 10 DC A 2 ? DC A 2 . ? 3_544 ? 11 AC2 10 DG A 3 ? DG A 3 . ? 3_544 ? 12 AC2 10 DG A 3 ? DG A 3 . ? 1_555 ? 13 AC2 10 DG A 4 ? DG A 4 . ? 1_555 ? 14 AC2 10 DC A 7 ? DC A 7 . ? 7_555 ? 15 AC2 10 DC A 8 ? DC A 8 . ? 7_555 ? 16 AC2 10 DG A 9 ? DG A 9 . ? 5_544 ? 17 AC2 10 DG A 10 ? DG A 10 . ? 5_544 ? 18 AC2 10 CL D . ? CL A 103 . ? 1_555 ? 19 AC3 3 DG A 4 ? DG A 4 . ? 1_555 ? 20 AC3 3 DA A 5 ? DA A 5 . ? 1_555 ? 21 AC3 3 RKL C . ? RKL A 102 . ? 1_555 ? # _atom_sites.entry_id 4YMC _atom_sites.fract_transf_matrix[1][1] 0.021106 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021106 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029560 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BA C CL N O P RU # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? 22.827 16.795 12.649 1.00 88.02 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? 23.724 16.053 11.800 1.00 86.50 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? 23.344 14.584 11.779 1.00 82.65 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? 22.996 13.863 12.978 1.00 83.02 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? 22.236 14.251 10.794 1.00 76.90 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? 22.711 14.298 9.457 1.00 70.35 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? 21.815 12.853 11.200 1.00 78.03 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? 22.443 12.623 12.569 1.00 74.24 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? 21.501 12.176 13.603 1.00 66.90 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? 21.455 10.819 13.938 1.00 58.39 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? 22.202 10.032 13.349 1.00 62.97 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? 20.599 10.400 14.895 1.00 64.83 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? 19.813 11.282 15.517 1.00 73.29 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? 18.984 10.824 16.459 1.00 71.89 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? 19.846 12.673 15.205 1.00 74.59 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? 20.690 13.071 14.243 1.00 71.51 ? 1 DC A C6 1 ATOM 17 P P . DC A 1 2 ? 22.014 15.333 8.450 1.00 90.02 ? 2 DC A P 1 ATOM 18 O OP1 . DC A 1 2 ? 22.961 16.471 8.227 1.00 94.42 ? 2 DC A OP1 1 ATOM 19 O OP2 . DC A 1 2 ? 20.610 15.585 8.909 1.00 84.75 ? 2 DC A OP2 1 ATOM 20 O "O5'" . DC A 1 2 ? 21.818 14.460 7.139 1.00 67.10 ? 2 DC A "O5'" 1 ATOM 21 C "C5'" . DC A 1 2 ? 21.378 13.140 7.314 1.00 57.85 ? 2 DC A "C5'" 1 ATOM 22 C "C4'" . DC A 1 2 ? 21.910 12.301 6.191 1.00 48.67 ? 2 DC A "C4'" 1 ATOM 23 O "O4'" . DC A 1 2 ? 21.892 10.951 6.678 1.00 51.01 ? 2 DC A "O4'" 1 ATOM 24 C "C3'" . DC A 1 2 ? 21.033 12.338 4.946 1.00 48.37 ? 2 DC A "C3'" 1 ATOM 25 O "O3'" . DC A 1 2 ? 21.738 12.822 3.807 1.00 44.75 ? 2 DC A "O3'" 1 ATOM 26 C "C2'" . DC A 1 2 ? 20.660 10.894 4.693 1.00 46.20 ? 2 DC A "C2'" 1 ATOM 27 C "C1'" . DC A 1 2 ? 20.926 10.182 5.997 1.00 44.51 ? 2 DC A "C1'" 1 ATOM 28 N N1 . DC A 1 2 ? 19.771 9.989 6.890 1.00 39.11 ? 2 DC A N1 1 ATOM 29 C C2 . DC A 1 2 ? 19.587 8.743 7.495 1.00 36.88 ? 2 DC A C2 1 ATOM 30 O O2 . DC A 1 2 ? 20.411 7.846 7.287 1.00 36.61 ? 2 DC A O2 1 ATOM 31 N N3 . DC A 1 2 ? 18.540 8.559 8.312 1.00 41.02 ? 2 DC A N3 1 ATOM 32 C C4 . DC A 1 2 ? 17.659 9.544 8.495 1.00 39.80 ? 2 DC A C4 1 ATOM 33 N N4 . DC A 1 2 ? 16.632 9.314 9.301 1.00 41.76 ? 2 DC A N4 1 ATOM 34 C C5 . DC A 1 2 ? 17.813 10.817 7.884 1.00 39.85 ? 2 DC A C5 1 ATOM 35 C C6 . DC A 1 2 ? 18.864 10.990 7.083 1.00 42.46 ? 2 DC A C6 1 ATOM 36 P P . DG A 1 3 ? 20.961 13.098 2.459 1.00 48.11 ? 3 DG A P 1 ATOM 37 O OP1 . DG A 1 3 ? 21.854 13.871 1.579 1.00 51.05 ? 3 DG A OP1 1 ATOM 38 O OP2 . DG A 1 3 ? 19.620 13.598 2.786 1.00 44.67 ? 3 DG A OP2 1 ATOM 39 O "O5'" . DG A 1 3 ? 20.929 11.688 1.739 1.00 44.26 ? 3 DG A "O5'" 1 ATOM 40 C "C5'" . DG A 1 3 ? 22.117 11.063 1.269 1.00 44.38 ? 3 DG A "C5'" 1 ATOM 41 C "C4'" . DG A 1 3 ? 21.864 9.611 0.934 1.00 47.29 ? 3 DG A "C4'" 1 ATOM 42 O "O4'" . DG A 1 3 ? 21.495 8.858 2.113 1.00 47.28 ? 3 DG A "O4'" 1 ATOM 43 C "C3'" . DG A 1 3 ? 20.752 9.375 -0.081 1.00 46.60 ? 3 DG A "C3'" 1 ATOM 44 O "O3'" . DG A 1 3 ? 21.364 9.371 -1.373 1.00 47.69 ? 3 DG A "O3'" 1 ATOM 45 C "C2'" . DG A 1 3 ? 20.201 8.019 0.323 1.00 45.91 ? 3 DG A "C2'" 1 ATOM 46 C "C1'" . DG A 1 3 ? 20.457 7.936 1.827 1.00 43.84 ? 3 DG A "C1'" 1 ATOM 47 N N9 . DG A 1 3 ? 19.314 8.297 2.660 1.00 37.63 ? 3 DG A N9 1 ATOM 48 C C8 . DG A 1 3 ? 18.543 9.424 2.533 1.00 38.20 ? 3 DG A C8 1 ATOM 49 N N7 . DG A 1 3 ? 17.607 9.510 3.434 1.00 33.97 ? 3 DG A N7 1 ATOM 50 C C5 . DG A 1 3 ? 17.744 8.352 4.183 1.00 33.49 ? 3 DG A C5 1 ATOM 51 C C6 . DG A 1 3 ? 17.007 7.895 5.298 1.00 31.84 ? 3 DG A C6 1 ATOM 52 O O6 . DG A 1 3 ? 16.053 8.441 5.867 1.00 35.05 ? 3 DG A O6 1 ATOM 53 N N1 . DG A 1 3 ? 17.519 6.698 5.790 1.00 29.64 ? 3 DG A N1 1 ATOM 54 C C2 . DG A 1 3 ? 18.566 6.005 5.229 1.00 32.38 ? 3 DG A C2 1 ATOM 55 N N2 . DG A 1 3 ? 18.903 4.860 5.817 1.00 33.01 ? 3 DG A N2 1 ATOM 56 N N3 . DG A 1 3 ? 19.267 6.431 4.198 1.00 38.22 ? 3 DG A N3 1 ATOM 57 C C4 . DG A 1 3 ? 18.796 7.593 3.719 1.00 36.14 ? 3 DG A C4 1 ATOM 58 P P . DG A 1 4 ? 20.665 10.080 -2.620 1.00 46.84 ? 4 DG A P 1 ATOM 59 O OP1 . DG A 1 4 ? 21.621 9.981 -3.748 1.00 49.78 ? 4 DG A OP1 1 ATOM 60 O OP2 . DG A 1 4 ? 20.167 11.388 -2.187 1.00 51.84 ? 4 DG A OP2 1 ATOM 61 O "O5'" . DG A 1 4 ? 19.446 9.108 -2.948 1.00 50.80 ? 4 DG A "O5'" 1 ATOM 62 C "C5'" . DG A 1 4 ? 19.691 7.768 -3.398 1.00 49.78 ? 4 DG A "C5'" 1 ATOM 63 C "C4'" . DG A 1 4 ? 18.380 7.049 -3.592 1.00 45.39 ? 4 DG A "C4'" 1 ATOM 64 O "O4'" . DG A 1 4 ? 17.676 7.046 -2.336 1.00 45.47 ? 4 DG A "O4'" 1 ATOM 65 C "C3'" . DG A 1 4 ? 17.441 7.730 -4.575 1.00 47.50 ? 4 DG A "C3'" 1 ATOM 66 O "O3'" . DG A 1 4 ? 16.651 6.710 -5.187 1.00 54.97 ? 4 DG A "O3'" 1 ATOM 67 C "C2'" . DG A 1 4 ? 16.588 8.590 -3.671 1.00 44.06 ? 4 DG A "C2'" 1 ATOM 68 C "C1'" . DG A 1 4 ? 16.423 7.657 -2.499 1.00 41.45 ? 4 DG A "C1'" 1 ATOM 69 N N9 . DG A 1 4 ? 16.058 8.280 -1.237 1.00 39.86 ? 4 DG A N9 1 ATOM 70 C C8 . DG A 1 4 ? 16.495 9.478 -0.736 1.00 40.92 ? 4 DG A C8 1 ATOM 71 N N7 . DG A 1 4 ? 15.974 9.769 0.424 1.00 42.56 ? 4 DG A N7 1 ATOM 72 C C5 . DG A 1 4 ? 15.145 8.696 0.705 1.00 37.67 ? 4 DG A C5 1 ATOM 73 C C6 . DG A 1 4 ? 14.337 8.430 1.840 1.00 38.68 ? 4 DG A C6 1 ATOM 74 O O6 . DG A 1 4 ? 14.157 9.130 2.840 1.00 45.57 ? 4 DG A O6 1 ATOM 75 N N1 . DG A 1 4 ? 13.656 7.231 1.710 1.00 40.92 ? 4 DG A N1 1 ATOM 76 C C2 . DG A 1 4 ? 13.752 6.386 0.638 1.00 35.25 ? 4 DG A C2 1 ATOM 77 N N2 . DG A 1 4 ? 13.031 5.259 0.712 1.00 35.08 ? 4 DG A N2 1 ATOM 78 N N3 . DG A 1 4 ? 14.530 6.601 -0.406 1.00 39.55 ? 4 DG A N3 1 ATOM 79 C C4 . DG A 1 4 ? 15.175 7.776 -0.317 1.00 38.70 ? 4 DG A C4 1 ATOM 80 P P . DA A 1 5 ? 16.012 6.929 -6.636 1.00 60.44 ? 5 DA A P 1 ATOM 81 O OP1 . DA A 1 5 ? 16.931 6.283 -7.630 1.00 56.12 ? 5 DA A OP1 1 ATOM 82 O OP2 . DA A 1 5 ? 15.604 8.358 -6.757 1.00 54.49 ? 5 DA A OP2 1 ATOM 83 O "O5'" . DA A 1 5 ? 14.609 6.204 -6.508 1.00 58.14 ? 5 DA A "O5'" 1 ATOM 84 C "C5'" . DA A 1 5 ? 14.524 4.790 -6.440 1.00 59.48 ? 5 DA A "C5'" 1 ATOM 85 C "C4'" . DA A 1 5 ? 13.136 4.454 -5.967 1.00 56.13 ? 5 DA A "C4'" 1 ATOM 86 O "O4'" . DA A 1 5 ? 13.011 4.945 -4.621 1.00 50.84 ? 5 DA A "O4'" 1 ATOM 87 C "C3'" . DA A 1 5 ? 12.040 5.145 -6.776 1.00 57.50 ? 5 DA A "C3'" 1 ATOM 88 O "O3'" . DA A 1 5 ? 11.016 4.257 -7.186 1.00 64.23 ? 5 DA A "O3'" 1 ATOM 89 C "C2'" . DA A 1 5 ? 11.387 6.101 -5.804 1.00 52.30 ? 5 DA A "C2'" 1 ATOM 90 C "C1'" . DA A 1 5 ? 11.759 5.544 -4.455 1.00 48.22 ? 5 DA A "C1'" 1 ATOM 91 N N9 . DA A 1 5 ? 11.943 6.634 -3.531 1.00 46.82 ? 5 DA A N9 1 ATOM 92 C C8 . DA A 1 5 ? 12.814 7.675 -3.698 1.00 39.18 ? 5 DA A C8 1 ATOM 93 N N7 . DA A 1 5 ? 12.771 8.555 -2.734 1.00 37.18 ? 5 DA A N7 1 ATOM 94 C C5 . DA A 1 5 ? 11.814 8.054 -1.869 1.00 38.84 ? 5 DA A C5 1 ATOM 95 C C6 . DA A 1 5 ? 11.292 8.534 -0.664 1.00 38.52 ? 5 DA A C6 1 ATOM 96 N N6 . DA A 1 5 ? 11.715 9.645 -0.066 1.00 42.59 ? 5 DA A N6 1 ATOM 97 N N1 . DA A 1 5 ? 10.341 7.798 -0.057 1.00 39.67 ? 5 DA A N1 1 ATOM 98 C C2 . DA A 1 5 ? 9.927 6.673 -0.649 1.00 40.39 ? 5 DA A C2 1 ATOM 99 N N3 . DA A 1 5 ? 10.323 6.133 -1.791 1.00 42.39 ? 5 DA A N3 1 ATOM 100 C C4 . DA A 1 5 ? 11.265 6.893 -2.370 1.00 36.40 ? 5 DA A C4 1 ATOM 101 P P . DT A 1 6 ? 10.026 4.725 -8.332 1.00 68.75 ? 6 DT A P 1 ATOM 102 O OP1 . DT A 1 6 ? 9.681 3.524 -9.131 1.00 82.07 ? 6 DT A OP1 1 ATOM 103 O OP2 . DT A 1 6 ? 10.613 5.938 -8.990 1.00 60.54 ? 6 DT A OP2 1 ATOM 104 O "O5'" . DT A 1 6 ? 8.694 5.081 -7.545 1.00 55.98 ? 6 DT A "O5'" 1 ATOM 105 C "C5'" . DT A 1 6 ? 8.246 4.284 -6.448 1.00 55.05 ? 6 DT A "C5'" 1 ATOM 106 C "C4'" . DT A 1 6 ? 7.142 5.020 -5.729 1.00 55.10 ? 6 DT A "C4'" 1 ATOM 107 O "O4'" . DT A 1 6 ? 7.687 5.769 -4.631 1.00 53.91 ? 6 DT A "O4'" 1 ATOM 108 C "C3'" . DT A 1 6 ? 6.386 6.030 -6.589 1.00 59.33 ? 6 DT A "C3'" 1 ATOM 109 O "O3'" . DT A 1 6 ? 5.141 5.426 -6.941 1.00 68.61 ? 6 DT A "O3'" 1 ATOM 110 C "C2'" . DT A 1 6 ? 6.149 7.213 -5.668 1.00 57.92 ? 6 DT A "C2'" 1 ATOM 111 C "C1'" . DT A 1 6 ? 6.858 6.872 -4.373 1.00 53.59 ? 6 DT A "C1'" 1 ATOM 112 N N1 . DT A 1 6 ? 7.708 7.953 -3.916 1.00 51.81 ? 6 DT A N1 1 ATOM 113 C C2 . DT A 1 6 ? 7.437 8.502 -2.693 1.00 48.38 ? 6 DT A C2 1 ATOM 114 O O2 . DT A 1 6 ? 6.540 8.103 -1.976 1.00 51.97 ? 6 DT A O2 1 ATOM 115 N N3 . DT A 1 6 ? 8.274 9.525 -2.326 1.00 49.90 ? 6 DT A N3 1 ATOM 116 C C4 . DT A 1 6 ? 9.317 10.049 -3.059 1.00 47.08 ? 6 DT A C4 1 ATOM 117 O O4 . DT A 1 6 ? 9.979 10.975 -2.601 1.00 51.26 ? 6 DT A O4 1 ATOM 118 C C5 . DT A 1 6 ? 9.529 9.438 -4.352 1.00 47.80 ? 6 DT A C5 1 ATOM 119 C C7 . DT A 1 6 ? 10.637 9.938 -5.223 1.00 50.80 ? 6 DT A C7 1 ATOM 120 C C6 . DT A 1 6 ? 8.730 8.427 -4.705 1.00 50.94 ? 6 DT A C6 1 ATOM 121 P P . DC A 1 7 ? 4.259 5.967 -8.144 1.00 65.37 ? 7 DC A P 1 ATOM 122 O OP1 . DC A 1 7 ? 3.131 5.014 -8.306 1.00 73.04 ? 7 DC A OP1 1 ATOM 123 O OP2 . DC A 1 7 ? 5.150 6.306 -9.304 1.00 51.06 ? 7 DC A OP2 1 ATOM 124 O "O5'" . DC A 1 7 ? 3.605 7.276 -7.527 1.00 58.06 ? 7 DC A "O5'" 1 ATOM 125 C "C5'" . DC A 1 7 ? 2.577 7.168 -6.539 1.00 50.42 ? 7 DC A "C5'" 1 ATOM 126 C "C4'" . DC A 1 7 ? 2.200 8.554 -6.087 1.00 49.73 ? 7 DC A "C4'" 1 ATOM 127 O "O4'" . DC A 1 7 ? 3.197 9.033 -5.166 1.00 49.78 ? 7 DC A "O4'" 1 ATOM 128 C "C3'" . DC A 1 7 ? 2.150 9.601 -7.188 1.00 44.71 ? 7 DC A "C3'" 1 ATOM 129 O "O3'" . DC A 1 7 ? 0.843 9.572 -7.783 1.00 44.32 ? 7 DC A "O3'" 1 ATOM 130 C "C2'" . DC A 1 7 ? 2.399 10.880 -6.411 1.00 47.34 ? 7 DC A "C2'" 1 ATOM 131 C "C1'" . DC A 1 7 ? 3.178 10.443 -5.166 1.00 48.33 ? 7 DC A "C1'" 1 ATOM 132 N N1 . DC A 1 7 ? 4.569 10.923 -5.146 1.00 49.37 ? 7 DC A N1 1 ATOM 133 C C2 . DC A 1 7 ? 5.041 11.589 -4.011 1.00 47.83 ? 7 DC A C2 1 ATOM 134 O O2 . DC A 1 7 ? 4.307 11.680 -3.018 1.00 45.63 ? 7 DC A O2 1 ATOM 135 N N3 . DC A 1 7 ? 6.293 12.101 -4.019 1.00 47.14 ? 7 DC A N3 1 ATOM 136 C C4 . DC A 1 7 ? 7.066 11.954 -5.095 1.00 41.68 ? 7 DC A C4 1 ATOM 137 N N4 . DC A 1 7 ? 8.293 12.461 -5.051 1.00 45.81 ? 7 DC A N4 1 ATOM 138 C C5 . DC A 1 7 ? 6.606 11.298 -6.269 1.00 45.64 ? 7 DC A C5 1 ATOM 139 C C6 . DC A 1 7 ? 5.361 10.806 -6.254 1.00 47.67 ? 7 DC A C6 1 ATOM 140 P P . DC A 1 8 ? 0.593 10.004 -9.297 1.00 47.39 ? 8 DC A P 1 ATOM 141 O OP1 . DC A 1 8 ? -0.762 9.578 -9.699 1.00 49.84 ? 8 DC A OP1 1 ATOM 142 O OP2 . DC A 1 8 ? 1.761 9.655 -10.129 1.00 46.86 ? 8 DC A OP2 1 ATOM 143 O "O5'" . DC A 1 8 ? 0.540 11.575 -9.233 1.00 46.27 ? 8 DC A "O5'" 1 ATOM 144 C "C5'" . DC A 1 8 ? -0.462 12.227 -8.480 1.00 45.68 ? 8 DC A "C5'" 1 ATOM 145 C "C4'" . DC A 1 8 ? -0.206 13.708 -8.579 1.00 40.82 ? 8 DC A "C4'" 1 ATOM 146 O "O4'" . DC A 1 8 ? 0.963 14.055 -7.813 1.00 39.40 ? 8 DC A "O4'" 1 ATOM 147 C "C3'" . DC A 1 8 ? 0.087 14.214 -9.978 1.00 40.77 ? 8 DC A "C3'" 1 ATOM 148 O "O3'" . DC A 1 8 ? -1.140 14.592 -10.593 1.00 41.91 ? 8 DC A "O3'" 1 ATOM 149 C "C2'" . DC A 1 8 ? 0.935 15.441 -9.724 1.00 38.89 ? 8 DC A "C2'" 1 ATOM 150 C "C1'" . DC A 1 8 ? 1.549 15.224 -8.344 1.00 36.35 ? 8 DC A "C1'" 1 ATOM 151 N N1 . DC A 1 8 ? 2.992 15.029 -8.299 1.00 37.42 ? 8 DC A N1 1 ATOM 152 C C2 . DC A 1 8 ? 3.775 15.914 -7.557 1.00 33.41 ? 8 DC A C2 1 ATOM 153 O O2 . DC A 1 8 ? 3.231 16.880 -7.005 1.00 42.20 ? 8 DC A O2 1 ATOM 154 N N3 . DC A 1 8 ? 5.104 15.710 -7.475 1.00 34.01 ? 8 DC A N3 1 ATOM 155 C C4 . DC A 1 8 ? 5.644 14.630 -8.040 1.00 36.04 ? 8 DC A C4 1 ATOM 156 N N4 . DC A 1 8 ? 6.953 14.449 -7.904 1.00 37.50 ? 8 DC A N4 1 ATOM 157 C C5 . DC A 1 8 ? 4.865 13.698 -8.785 1.00 34.54 ? 8 DC A C5 1 ATOM 158 C C6 . DC A 1 8 ? 3.553 13.918 -8.864 1.00 35.42 ? 8 DC A C6 1 ATOM 159 P P . DG A 1 9 ? -1.188 14.895 -12.126 1.00 42.69 ? 9 DG A P 1 ATOM 160 O OP1 . DG A 1 9 ? -2.613 14.859 -12.540 1.00 42.81 ? 9 DG A OP1 1 ATOM 161 O OP2 . DG A 1 9 ? -0.153 14.099 -12.844 1.00 45.93 ? 9 DG A OP2 1 ATOM 162 O "O5'" . DG A 1 9 ? -0.742 16.408 -12.220 1.00 42.41 ? 9 DG A "O5'" 1 ATOM 163 C "C5'" . DG A 1 9 ? -1.583 17.450 -11.731 1.00 41.60 ? 9 DG A "C5'" 1 ATOM 164 C "C4'" . DG A 1 9 ? -0.825 18.748 -11.803 1.00 42.73 ? 9 DG A "C4'" 1 ATOM 165 O "O4'" . DG A 1 9 ? 0.424 18.549 -11.116 1.00 42.94 ? 9 DG A "O4'" 1 ATOM 166 C "C3'" . DG A 1 9 ? -0.473 19.130 -13.234 1.00 49.14 ? 9 DG A "C3'" 1 ATOM 167 O "O3'" . DG A 1 9 ? -0.648 20.486 -13.596 1.00 57.69 ? 9 DG A "O3'" 1 ATOM 168 C "C2'" . DG A 1 9 ? 1.010 18.907 -13.340 1.00 46.83 ? 9 DG A "C2'" 1 ATOM 169 C "C1'" . DG A 1 9 ? 1.478 18.992 -11.915 1.00 42.96 ? 9 DG A "C1'" 1 ATOM 170 N N9 . DG A 1 9 ? 2.603 18.106 -11.704 1.00 39.21 ? 9 DG A N9 1 ATOM 171 C C8 . DG A 1 9 ? 2.853 16.922 -12.349 1.00 38.90 ? 9 DG A C8 1 ATOM 172 N N7 . DG A 1 9 ? 3.988 16.386 -12.004 1.00 35.87 ? 9 DG A N7 1 ATOM 173 C C5 . DG A 1 9 ? 4.520 17.273 -11.082 1.00 36.09 ? 9 DG A C5 1 ATOM 174 C C6 . DG A 1 9 ? 5.745 17.239 -10.375 1.00 35.16 ? 9 DG A C6 1 ATOM 175 O O6 . DG A 1 9 ? 6.637 16.386 -10.421 1.00 43.30 ? 9 DG A O6 1 ATOM 176 N N1 . DG A 1 9 ? 5.904 18.357 -9.572 1.00 38.34 ? 9 DG A N1 1 ATOM 177 C C2 . DG A 1 9 ? 4.984 19.363 -9.431 1.00 39.01 ? 9 DG A C2 1 ATOM 178 N N2 . DG A 1 9 ? 5.318 20.359 -8.608 1.00 43.32 ? 9 DG A N2 1 ATOM 179 N N3 . DG A 1 9 ? 3.849 19.418 -10.097 1.00 38.64 ? 9 DG A N3 1 ATOM 180 C C4 . DG A 1 9 ? 3.686 18.350 -10.904 1.00 37.04 ? 9 DG A C4 1 ATOM 181 P P . DG A 1 10 ? -1.066 20.800 -15.116 1.00 67.93 ? 10 DG A P 1 ATOM 182 O OP1 . DG A 1 10 ? -2.491 21.288 -15.061 1.00 76.72 ? 10 DG A OP1 1 ATOM 183 O OP2 . DG A 1 10 ? -0.726 19.601 -15.986 1.00 67.47 ? 10 DG A OP2 1 ATOM 184 O "O5'" . DG A 1 10 ? -0.093 22.015 -15.485 1.00 74.11 ? 10 DG A "O5'" 1 ATOM 185 C "C5'" . DG A 1 10 ? 1.318 21.823 -15.707 1.00 57.27 ? 10 DG A "C5'" 1 ATOM 186 C "C4'" . DG A 1 10 ? 2.012 23.162 -15.737 1.00 54.89 ? 10 DG A "C4'" 1 ATOM 187 O "O4'" . DG A 1 10 ? 3.109 23.163 -14.803 1.00 59.93 ? 10 DG A "O4'" 1 ATOM 188 C "C3'" . DG A 1 10 ? 2.635 23.535 -17.069 1.00 54.60 ? 10 DG A "C3'" 1 ATOM 189 O "O3'" . DG A 1 10 ? 1.617 24.079 -17.907 1.00 52.85 ? 10 DG A "O3'" 1 ATOM 190 C "C2'" . DG A 1 10 ? 3.739 24.496 -16.657 1.00 55.74 ? 10 DG A "C2'" 1 ATOM 191 C "C1'" . DG A 1 10 ? 4.172 23.993 -15.277 1.00 54.71 ? 10 DG A "C1'" 1 ATOM 192 N N9 . DG A 1 10 ? 5.392 23.186 -15.283 1.00 46.63 ? 10 DG A N9 1 ATOM 193 C C8 . DG A 1 10 ? 6.552 23.382 -14.571 1.00 43.37 ? 10 DG A C8 1 ATOM 194 N N7 . DG A 1 10 ? 7.444 22.453 -14.782 1.00 40.87 ? 10 DG A N7 1 ATOM 195 C C5 . DG A 1 10 ? 6.840 21.598 -15.691 1.00 42.59 ? 10 DG A C5 1 ATOM 196 C C6 . DG A 1 10 ? 7.321 20.415 -16.295 1.00 42.24 ? 10 DG A C6 1 ATOM 197 O O6 . DG A 1 10 ? 8.426 19.877 -16.164 1.00 55.96 ? 10 DG A O6 1 ATOM 198 N N1 . DG A 1 10 ? 6.371 19.853 -17.146 1.00 41.25 ? 10 DG A N1 1 ATOM 199 C C2 . DG A 1 10 ? 5.113 20.362 -17.371 1.00 43.02 ? 10 DG A C2 1 ATOM 200 N N2 . DG A 1 10 ? 4.333 19.684 -18.226 1.00 47.14 ? 10 DG A N2 1 ATOM 201 N N3 . DG A 1 10 ? 4.659 21.468 -16.822 1.00 43.16 ? 10 DG A N3 1 ATOM 202 C C4 . DG A 1 10 ? 5.567 22.031 -15.999 1.00 45.35 ? 10 DG A C4 1 HETATM 203 BA BA . BA B 2 . ? 15.474 11.616 2.861 1.00 46.54 ? 101 BA A BA 1 HETATM 204 RU RU . RKL C 3 . ? 15.733 0.822 0.936 1.00 40.34 ? 102 RKL A RU 1 HETATM 205 C C1 . RKL C 3 . ? 17.163 -0.959 2.443 1.00 39.01 ? 102 RKL A C1 1 HETATM 206 N N1 . RKL C 3 . ? 15.030 -0.994 1.386 1.00 37.21 ? 102 RKL A N1 1 HETATM 207 C C2 . RKL C 3 . ? 18.570 0.827 2.048 1.00 47.05 ? 102 RKL A C2 1 HETATM 208 N N2 . RKL C 3 . ? 17.402 0.238 1.914 1.00 38.91 ? 102 RKL A N2 1 HETATM 209 C C3 . RKL C 3 . ? 19.536 0.233 2.844 1.00 42.71 ? 102 RKL A C3 1 HETATM 210 N N3 . RKL C 3 . ? 18.770 -3.332 4.658 1.00 38.74 ? 102 RKL A N3 1 HETATM 211 C C4 . RKL C 3 . ? 19.325 -0.972 3.456 1.00 37.00 ? 102 RKL A C4 1 HETATM 212 N N4 . RKL C 3 . ? 16.376 -4.548 4.251 1.00 38.14 ? 102 RKL A N4 1 HETATM 213 C C5 . RKL C 3 . ? 18.113 -1.578 3.258 1.00 34.23 ? 102 RKL A C5 1 HETATM 214 N N5 . RKL C 3 . ? 16.357 0.076 -0.895 1.00 38.99 ? 102 RKL A N5 1 HETATM 215 C C6 . RKL C 3 . ? 17.850 -2.773 3.866 1.00 38.62 ? 102 RKL A C6 1 HETATM 216 N N6 . RKL C 3 . ? 16.603 -0.420 -3.642 1.00 40.46 ? 102 RKL A N6 1 HETATM 217 C C7 . RKL C 3 . ? 16.613 -3.382 3.661 1.00 38.40 ? 102 RKL A C7 1 HETATM 218 N N7 . RKL C 3 . ? 12.020 1.899 -1.763 1.00 40.72 ? 102 RKL A N7 1 HETATM 219 C C8 . RKL C 3 . ? 15.675 -2.793 2.831 1.00 39.14 ? 102 RKL A C8 1 HETATM 220 N N8 . RKL C 3 . ? 14.055 1.367 -0.086 1.00 38.23 ? 102 RKL A N8 1 HETATM 221 C C9 . RKL C 3 . ? 14.449 -3.388 2.627 1.00 38.47 ? 102 RKL A C9 1 HETATM 222 N N9 . RKL C 3 . ? 15.116 1.603 2.660 1.00 37.28 ? 102 RKL A N9 1 HETATM 223 C C10 . RKL C 3 . ? 15.917 -1.567 2.233 1.00 37.86 ? 102 RKL A C10 1 HETATM 224 N N10 . RKL C 3 . ? 14.305 3.168 4.694 1.00 40.01 ? 102 RKL A N10 1 HETATM 225 C C11 . RKL C 3 . ? 13.533 -2.748 1.813 1.00 38.21 ? 102 RKL A C11 1 HETATM 226 N N11 . RKL C 3 . ? 17.215 5.379 0.726 1.00 38.85 ? 102 RKL A N11 1 HETATM 227 C C12 . RKL C 3 . ? 13.821 -1.514 1.216 1.00 38.38 ? 102 RKL A C12 1 HETATM 228 N N12 . RKL C 3 . ? 16.490 2.679 0.548 1.00 39.86 ? 102 RKL A N12 1 HETATM 229 C C13 . RKL C 3 . ? 17.292 -5.096 5.047 1.00 37.84 ? 102 RKL A C13 1 HETATM 230 C C14 . RKL C 3 . ? 17.033 -6.304 5.673 1.00 39.05 ? 102 RKL A C14 1 HETATM 231 C C15 . RKL C 3 . ? 18.506 -4.505 5.249 1.00 39.10 ? 102 RKL A C15 1 HETATM 232 C C16 . RKL C 3 . ? 19.438 -5.075 6.078 1.00 38.92 ? 102 RKL A C16 1 HETATM 233 C C17 . RKL C 3 . ? 19.205 -6.284 6.689 1.00 40.29 ? 102 RKL A C17 1 HETATM 234 C C18 . RKL C 3 . ? 17.990 -6.896 6.490 1.00 38.83 ? 102 RKL A C18 1 HETATM 235 C C19 . RKL C 3 . ? 15.383 0.431 -1.808 1.00 38.89 ? 102 RKL A C19 1 HETATM 236 C C20 . RKL C 3 . ? 17.484 -0.431 -1.397 1.00 36.72 ? 102 RKL A C20 1 HETATM 237 C C21 . RKL C 3 . ? 17.591 -0.713 -2.758 1.00 38.06 ? 102 RKL A C21 1 HETATM 238 C C22 . RKL C 3 . ? 15.460 0.132 -3.165 1.00 42.24 ? 102 RKL A C22 1 HETATM 239 C C23 . RKL C 3 . ? 14.403 0.448 -4.050 1.00 38.59 ? 102 RKL A C23 1 HETATM 240 C C24 . RKL C 3 . ? 13.248 1.029 -3.580 1.00 41.29 ? 102 RKL A C24 1 HETATM 241 C C25 . RKL C 3 . ? 13.130 1.307 -2.235 1.00 39.11 ? 102 RKL A C25 1 HETATM 242 C C26 . RKL C 3 . ? 14.188 1.031 -1.357 1.00 38.05 ? 102 RKL A C26 1 HETATM 243 C C27 . RKL C 3 . ? 11.891 2.169 -0.481 1.00 37.61 ? 102 RKL A C27 1 HETATM 244 C C28 . RKL C 3 . ? 12.915 1.854 0.398 1.00 39.75 ? 102 RKL A C28 1 HETATM 245 C C29 . RKL C 3 . ? 15.384 2.897 2.630 1.00 36.88 ? 102 RKL A C29 1 HETATM 246 C C30 . RKL C 3 . ? 14.318 1.149 3.626 1.00 37.98 ? 102 RKL A C30 1 HETATM 247 C C31 . RKL C 3 . ? 13.972 1.952 4.640 1.00 36.75 ? 102 RKL A C31 1 HETATM 248 C C32 . RKL C 3 . ? 15.023 3.693 3.697 1.00 36.07 ? 102 RKL A C32 1 HETATM 249 C C33 . RKL C 3 . ? 15.364 5.003 3.747 1.00 39.68 ? 102 RKL A C33 1 HETATM 250 C C34 . RKL C 3 . ? 16.113 5.582 2.740 1.00 36.15 ? 102 RKL A C34 1 HETATM 251 C C35 . RKL C 3 . ? 16.494 4.802 1.692 1.00 40.13 ? 102 RKL A C35 1 HETATM 252 C C36 . RKL C 3 . ? 16.150 3.448 1.604 1.00 39.89 ? 102 RKL A C36 1 HETATM 253 C C37 . RKL C 3 . ? 17.559 4.589 -0.290 1.00 41.37 ? 102 RKL A C37 1 HETATM 254 C C38 . RKL C 3 . ? 17.230 3.236 -0.393 1.00 41.16 ? 102 RKL A C38 1 HETATM 255 CL CL . CL D 4 . ? 14.476 4.296 -2.234 1.00 61.90 ? 103 CL A CL 1 HETATM 256 O O . HOH E 5 . ? 18.070 12.528 -1.446 1.00 45.18 ? 201 HOH A O 1 HETATM 257 O O . HOH E 5 . ? 17.667 12.946 4.406 1.00 44.27 ? 202 HOH A O 1 HETATM 258 O O . HOH E 5 . ? 10.908 1.564 -6.793 1.00 54.45 ? 203 HOH A O 1 HETATM 259 O O . HOH E 5 . ? 14.819 10.835 5.442 1.00 35.12 ? 204 HOH A O 1 HETATM 260 O O . HOH E 5 . ? 11.967 12.803 -3.451 1.00 49.87 ? 205 HOH A O 1 HETATM 261 O O . HOH E 5 . ? 7.114 14.012 -12.026 1.00 45.41 ? 206 HOH A O 1 HETATM 262 O O . HOH E 5 . ? 14.105 11.072 -2.057 1.00 43.41 ? 207 HOH A O 1 HETATM 263 O O . HOH E 5 . ? 17.562 12.340 1.076 1.00 50.02 ? 208 HOH A O 1 HETATM 264 O O . HOH E 5 . ? 1.194 15.531 -15.081 1.00 53.03 ? 209 HOH A O 1 HETATM 265 O O . HOH E 5 . ? 14.051 12.073 0.355 1.00 59.27 ? 210 HOH A O 1 HETATM 266 O O . HOH E 5 . ? 7.853 12.250 -9.749 1.00 45.18 ? 211 HOH A O 1 HETATM 267 O O . HOH E 5 . ? 3.076 22.262 -7.764 1.00 49.29 ? 212 HOH A O 1 HETATM 268 O O . HOH E 5 . ? 5.854 5.854 -0.000 0.50 47.89 ? 213 HOH A O 1 HETATM 269 O O . HOH E 5 . ? 19.945 3.723 2.726 1.00 51.48 ? 214 HOH A O 1 HETATM 270 O O . HOH E 5 . ? 9.650 11.976 -8.004 1.00 47.42 ? 215 HOH A O 1 HETATM 271 O O . HOH E 5 . ? 2.015 26.167 -13.537 1.00 40.12 ? 216 HOH A O 1 HETATM 272 O O . HOH E 5 . ? 17.560 10.570 13.200 1.00 49.19 ? 217 HOH A O 1 HETATM 273 O O . HOH E 5 . ? 12.765 12.445 -5.851 1.00 50.46 ? 218 HOH A O 1 HETATM 274 O O . HOH E 5 . ? 15.088 13.860 3.302 1.00 53.70 ? 219 HOH A O 1 HETATM 275 O O . HOH E 5 . ? 15.861 12.184 -3.739 1.00 53.70 ? 220 HOH A O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DC 2 2 2 DC DC A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DA 5 5 5 DA DA A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DC 7 7 7 DC DC A . n A 1 8 DC 8 8 8 DC DC A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DG 10 10 10 DG DG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BA 1 101 1 BA BA A . C 3 RKL 1 102 2 RKL RKL A . D 4 CL 1 103 1 CL CL A . E 5 HOH 1 201 26 HOH HOH A . E 5 HOH 2 202 8 HOH HOH A . E 5 HOH 3 203 35 HOH HOH A . E 5 HOH 4 204 4 HOH HOH A . E 5 HOH 5 205 23 HOH HOH A . E 5 HOH 6 206 13 HOH HOH A . E 5 HOH 7 207 2 HOH HOH A . E 5 HOH 8 208 30 HOH HOH A . E 5 HOH 9 209 34 HOH HOH A . E 5 HOH 10 210 14 HOH HOH A . E 5 HOH 11 211 17 HOH HOH A . E 5 HOH 12 212 33 HOH HOH A . E 5 HOH 13 213 32 HOH HOH A . E 5 HOH 14 214 7 HOH HOH A . E 5 HOH 15 215 9 HOH HOH A . E 5 HOH 16 216 10 HOH HOH A . E 5 HOH 17 217 22 HOH HOH A . E 5 HOH 18 218 25 HOH HOH A . E 5 HOH 19 219 12 HOH HOH A . E 5 HOH 20 220 29 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1940 ? 1 MORE -57 ? 1 'SSA (A^2)' 4950 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 213 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 204 ? 1_555 69.4 ? 2 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 202 ? 1_555 137.7 ? 3 O ? E HOH . ? A HOH 204 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 202 ? 1_555 79.5 ? 4 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 208 ? 1_555 124.4 ? 5 O ? E HOH . ? A HOH 204 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 208 ? 1_555 146.1 ? 6 O ? E HOH . ? A HOH 202 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 208 ? 1_555 70.9 ? 7 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 210 ? 1_555 84.5 ? 8 O ? E HOH . ? A HOH 204 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 210 ? 1_555 136.7 ? 9 O ? E HOH . ? A HOH 202 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 210 ? 1_555 137.0 ? 10 O ? E HOH . ? A HOH 208 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 210 ? 1_555 77.2 ? 11 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 205 ? 7_555 70.2 ? 12 O ? E HOH . ? A HOH 204 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 205 ? 7_555 66.9 ? 13 O ? E HOH . ? A HOH 202 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 205 ? 7_555 122.8 ? 14 O ? E HOH . ? A HOH 208 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 205 ? 7_555 144.5 ? 15 O ? E HOH . ? A HOH 210 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? E HOH . ? A HOH 205 ? 7_555 72.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-03-23 2 'Structure model' 2 0 2017-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Author supporting evidence' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' pdbx_audit_support 3 2 'Structure model' pdbx_struct_conn_angle 4 2 'Structure model' struct_conn 5 2 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.occupancy' 6 2 'Structure model' '_pdbx_audit_support.funding_organization' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.value' 10 2 'Structure model' '_struct_conn.pdbx_dist_value' 11 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 2 'Structure model' '_struct_site_gen.auth_seq_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0073 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELX ? ? ? . 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "C5'" _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 DC _pdbx_validate_rmsd_angle.auth_seq_id_1 1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C4'" _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 DC _pdbx_validate_rmsd_angle.auth_seq_id_2 1 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 DC _pdbx_validate_rmsd_angle.auth_seq_id_3 1 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 122.21 _pdbx_validate_rmsd_angle.angle_target_value 109.80 _pdbx_validate_rmsd_angle.angle_deviation 12.41 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4YMC 'double helix' 4YMC 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 A DG 10 7_555 0.354 1.940 0.146 1.731 16.639 -80.865 1 A_DC1:DG10_A A 1 ? A 10 ? ? ? 1 A DC 2 1_555 A DG 9 7_555 0.287 -0.123 -0.103 -6.777 4.785 -1.137 2 A_DC2:DG9_A A 2 ? A 9 ? 19 1 1 A DG 3 1_555 A DC 8 7_555 -0.095 -0.028 0.082 22.643 -7.778 1.718 3 A_DG3:DC8_A A 3 ? A 8 ? 19 1 1 A DG 4 1_555 A DC 7 7_555 -0.069 -0.075 -0.136 -10.182 3.087 -0.671 4 A_DG4:DC7_A A 4 ? A 7 ? 19 1 1 A DA 5 1_555 A DT 6 7_555 -0.060 -0.403 0.293 -3.137 -7.416 2.704 5 A_DA5:DT6_A A 5 ? A 6 ? 20 1 1 A DT 6 1_555 A DA 5 7_555 0.060 -0.403 0.293 3.137 -7.416 2.704 6 A_DT6:DA5_A A 6 ? A 5 ? 20 1 1 A DC 7 1_555 A DG 4 7_555 0.069 -0.075 -0.136 10.182 3.087 -0.671 7 A_DC7:DG4_A A 7 ? A 4 ? 19 1 1 A DC 8 1_555 A DG 3 7_555 0.095 -0.028 0.082 -22.643 -7.778 1.718 8 A_DC8:DG3_A A 8 ? A 3 ? 19 1 1 A DG 9 1_555 A DC 2 7_555 -0.287 -0.123 -0.103 6.777 4.785 -1.137 9 A_DG9:DC2_A A 9 ? A 2 ? 19 1 1 A DG 10 1_555 A DC 1 7_555 -0.354 -1.940 -0.146 -1.731 -16.639 80.865 10 A_DG10:DC1_A A 10 ? A 1 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 A DG 10 7_555 A DC 2 1_555 A DG 9 7_555 -1.159 2.847 6.702 1.244 -9.922 -27.294 -0.851 -1.707 7.311 20.186 2.530 -29.035 1 AA_DC1DC2:DG9DG10_AA A 1 ? A 10 ? A 2 ? A 9 ? 1 A DC 2 1_555 A DG 9 7_555 A DG 3 1_555 A DC 8 7_555 -0.009 1.618 2.815 0.007 5.567 19.427 2.247 0.029 3.149 16.075 -0.020 20.202 2 AA_DC2DG3:DC8DG9_AA A 2 ? A 9 ? A 3 ? A 8 ? 1 A DG 3 1_555 A DC 8 7_555 A DG 4 1_555 A DC 7 7_555 -0.030 0.943 5.180 -2.511 49.860 13.700 -5.414 -0.293 2.326 75.533 3.804 51.652 3 AA_DG3DG4:DC7DC8_AA A 3 ? A 8 ? A 4 ? A 7 ? 1 A DG 4 1_555 A DC 7 7_555 A DA 5 1_555 A DT 6 7_555 -1.087 0.328 3.314 -8.380 9.368 32.801 -0.959 0.459 3.444 15.882 14.206 35.065 4 AA_DG4DA5:DT6DC7_AA A 4 ? A 7 ? A 5 ? A 6 ? 1 A DA 5 1_555 A DT 6 7_555 A DT 6 1_555 A DA 5 7_555 0.000 -0.781 3.211 0.000 8.581 28.978 -3.154 0.000 2.868 16.692 0.000 30.196 5 AA_DA5DT6:DA5DT6_AA A 5 ? A 6 ? A 6 ? A 5 ? 1 A DT 6 1_555 A DA 5 7_555 A DC 7 1_555 A DG 4 7_555 1.087 0.328 3.314 8.380 9.368 32.801 -0.959 -0.459 3.444 15.882 -14.206 35.065 6 AA_DT6DC7:DG4DA5_AA A 6 ? A 5 ? A 7 ? A 4 ? 1 A DC 7 1_555 A DG 4 7_555 A DC 8 1_555 A DG 3 7_555 0.030 0.943 5.180 2.511 49.860 13.700 -5.414 0.293 2.326 75.533 -3.804 51.652 7 AA_DC7DC8:DG3DG4_AA A 7 ? A 4 ? A 8 ? A 3 ? 1 A DC 8 1_555 A DG 3 7_555 A DG 9 1_555 A DC 2 7_555 0.009 1.618 2.815 -0.007 5.567 19.427 2.247 -0.029 3.149 16.075 0.020 20.202 8 AA_DC8DG9:DC2DG3_AA A 8 ? A 3 ? A 9 ? A 2 ? 1 A DG 9 1_555 A DC 2 7_555 A DG 10 1_555 A DC 1 7_555 4.466 5.813 0.796 165.201 -40.109 165.710 2.921 -2.174 1.158 -20.064 -82.638 178.758 9 AA_DG9DG10:DC1DC2_AA A 9 ? A 2 ? A 10 ? A 1 ? # _pdbx_audit_support.funding_organization 'Biotechnology and Biological Sciences Research Council' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number BB/K019279/1 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'BARIUM ION' BA 3 'Ru(tap)2(dppz) complex' RKL 4 'CHLORIDE ION' CL 5 water HOH #