0.016947 0.000000 0.000000 -0.000000 0.015151 0.000000 0.000000 -0.000000 0.012453 0.000000 0.000000 0.000000 Tang, Y. Bellon, S. Cochran, A.G. Poy, F. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 59.009 66.001 80.302 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C10 H18 N2 O3 214.262 n N-6-crotonyl-L-lysine L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N C N 187 N C N 188 N C N 189 N N N 190 N C N 191 N O N 192 N C N 193 N C N 194 N C N 195 N C N 196 N O N 197 N O N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N C N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N N N 239 S C N 240 N C N 241 N O N 242 N C N 243 N C N 244 N C N 245 N C N 246 N N N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N N N 264 S C N 265 N C N 266 N O N 267 N C N 268 N C N 269 N S N 270 N C N 271 N O N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N N N 284 S C N 285 N C N 286 N O N 287 N C Y 288 N C Y 289 N C Y 290 N C Y 291 N C Y 292 N C Y 293 N C N 294 N O N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N N N 307 S C N 308 N C N 309 N O N 310 N C N 311 N C N 312 N C N 313 N O N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 N C N 328 N O N 329 N O N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N N N 338 S C N 339 N C N 340 N O N 341 R C N 342 N O N 343 N C N 344 N O N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N N N 355 S C N 356 N C N 357 N O N 358 N C Y 359 N C Y 360 N C Y 361 N C Y 362 N N Y 363 N C Y 364 N C Y 365 N C Y 366 N C Y 367 N C N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N N N 382 S C N 383 N C N 384 N O N 385 N C Y 386 N C Y 387 N C Y 388 N C Y 389 N C Y 390 N C Y 391 N C N 392 N O N 393 N O N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N N N 406 S C N 407 N C N 408 N O N 409 N C N 410 N C N 411 N C N 412 N O N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 E doub N 175 N sing N 176 N doub N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N doub N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N doub N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing Y 280 N doub Y 281 N sing Y 282 N sing N 283 N sing Y 284 N doub N 285 N sing Y 286 N doub N 287 N sing Y 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N doub N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N doub N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing Y 349 N doub Y 350 N sing Y 351 N sing N 352 N sing Y 353 N doub Y 354 N sing Y 355 N sing N 356 N sing Y 357 N sing Y 358 N doub N 359 N sing Y 360 N doub N 361 N sing Y 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N doub N 373 N sing N 374 N sing N 375 N sing N 376 N sing Y 377 N doub Y 378 N sing Y 379 N sing N 380 N sing Y 381 N doub N 382 N sing Y 383 N doub N 384 N sing Y 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N doub N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing UK Structure STRUE6 2005 0969-2126 23 1801 1814 10.1016/j.str.2015.08.004 26365797 A Subset of Human Bromodomains Recognizes Butyryllysine and Crotonyllysine Histone Peptide Modifications. 2015 10.2210/pdb4yyn/pdb pdb_00004yyn 100 1 CCD 2013-07-08 RAYONIX MX300-HS Si(111) SINGLE WAVELENGTH M x-ray 1 1.000 1.0 22-ID APS 1.000 SYNCHROTRON APS BEAMLINE 22-ID 16576.604 Transcription initiation factor TFIID subunit 1 bromodomain (UNP residues 1497-1638) 2 man polymer lysine residues crotonylated 1110.249 Histone H4 N-terminal tail (UNP residues 2-12) 1 syn polymer 18.015 water 84 nat water Cell cycle gene 1 protein, TBP-associated factor 250 kDa, p250, Transcription initiation factor TFIID 250 kDa subunit, TAFII250 no no GSPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNL ILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMT GSPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNL ILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMT A,B polypeptide(L) no yes SGRG(KCR)GG(KCR)GLG SGRGXGGXGLG Z polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 144 TAF1, BA2R, CCG1, CCGS, TAF2A 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) plasmid Biological sequence pRSF 1 2.31 46.77 VAPOR DIFFUSION, SITTING DROP 7.5 0.2 M calcium acetate, 20% w/v PEG3350 277 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_oper_list chem_comp_atom chem_comp_bond repository Initial release Database references Database references Experimental preparation Data collection Database references Derived calculations Refinement description Data collection 1 0 2015-09-16 1 1 2015-09-30 1 2 2015-10-14 1 3 2016-03-09 1 4 2023-09-27 1 5 2023-11-15 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_oper_list.symmetry_operation _chem_comp_atom.atom_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 N RCSB Y RCSB 2015-03-24 REL REL HOH water 9606 Human Homo sapiens sample 1 11 1EQF PDB entry 1EQF PDB experimental model HOH 28 3 HOH HOH 1701 A HOH 17 3 HOH HOH 1702 A HOH 80 3 HOH HOH 1703 A HOH 40 3 HOH HOH 1704 A HOH 38 3 HOH HOH 1705 A HOH 35 3 HOH HOH 1706 A HOH 3 3 HOH HOH 1707 A HOH 54 3 HOH HOH 1708 A HOH 53 3 HOH HOH 1709 A HOH 24 3 HOH HOH 1710 A HOH 2 3 HOH HOH 1711 A HOH 25 3 HOH HOH 1712 A HOH 9 3 HOH HOH 1713 A HOH 4 3 HOH HOH 1714 A HOH 73 3 HOH HOH 1715 A HOH 6 3 HOH HOH 1716 A HOH 55 3 HOH HOH 1717 A HOH 39 3 HOH HOH 1718 A HOH 65 3 HOH HOH 1719 A HOH 43 3 HOH HOH 1720 A HOH 8 3 HOH HOH 1721 A HOH 70 3 HOH HOH 1722 A HOH 58 3 HOH HOH 1723 A HOH 64 3 HOH HOH 1724 A HOH 16 3 HOH HOH 1725 A HOH 51 3 HOH HOH 1726 A HOH 1 3 HOH HOH 1727 A HOH 15 3 HOH HOH 1728 A HOH 78 3 HOH HOH 1729 A HOH 29 3 HOH HOH 1730 A HOH 30 3 HOH HOH 1731 A HOH 31 3 HOH HOH 1732 A HOH 56 3 HOH HOH 1733 A HOH 52 3 HOH HOH 1734 A HOH 27 3 HOH HOH 1735 A HOH 81 3 HOH HOH 1736 A HOH 68 3 HOH HOH 1701 B HOH 46 3 HOH HOH 1702 B HOH 59 3 HOH HOH 1703 B HOH 79 3 HOH HOH 1704 B HOH 22 3 HOH HOH 1705 B HOH 44 3 HOH HOH 1706 B HOH 36 3 HOH HOH 1707 B HOH 18 3 HOH HOH 1708 B HOH 12 3 HOH HOH 1709 B HOH 7 3 HOH HOH 1710 B HOH 66 3 HOH HOH 1711 B HOH 26 3 HOH HOH 1712 B HOH 83 3 HOH HOH 1713 B HOH 42 3 HOH HOH 1714 B HOH 82 3 HOH HOH 1715 B HOH 14 3 HOH HOH 1716 B HOH 84 3 HOH HOH 1717 B HOH 34 3 HOH HOH 1718 B HOH 69 3 HOH HOH 1719 B HOH 71 3 HOH HOH 1720 B HOH 13 3 HOH HOH 1721 B HOH 49 3 HOH HOH 1722 B HOH 61 3 HOH HOH 1723 B HOH 21 3 HOH HOH 1724 B HOH 10 3 HOH HOH 1725 B HOH 50 3 HOH HOH 1726 B HOH 11 3 HOH HOH 1727 B HOH 67 3 HOH HOH 1728 B HOH 37 3 HOH HOH 1729 B HOH 23 3 HOH HOH 1730 B HOH 57 3 HOH HOH 1731 B HOH 19 3 HOH HOH 1732 B HOH 20 3 HOH HOH 1733 B HOH 63 3 HOH HOH 1734 B HOH 77 3 HOH HOH 1735 B HOH 47 3 HOH HOH 1736 B HOH 75 3 HOH HOH 1737 B HOH 48 3 HOH HOH 1738 B HOH 76 3 HOH HOH 1739 B HOH 74 3 HOH HOH 1740 B HOH 32 3 HOH HOH 1741 B HOH 33 3 HOH HOH 101 Z HOH 41 3 HOH HOH 102 Z HOH 5 3 HOH HOH 103 Z HOH 72 3 HOH HOH 104 Z HOH 45 3 HOH HOH 105 Z HOH 62 3 HOH HOH 106 Z HOH 60 3 HOH HOH 107 Z n 1 1495 A n 2 1496 A n 3 1497 A n 4 1498 A n 5 1499 A n 6 1500 A ASP 1501 n 7 ASP 1501 A ASP 1502 n 8 ASP 1502 A ASP 1503 n 9 ASP 1503 A GLN 1504 n 10 GLN 1504 A VAL 1505 n 11 VAL 1505 A ALA 1506 n 12 ALA 1506 A PHE 1507 n 13 PHE 1507 A SER 1508 n 14 SER 1508 A PHE 1509 n 15 PHE 1509 A ILE 1510 n 16 ILE 1510 A LEU 1511 n 17 LEU 1511 A ASP 1512 n 18 ASP 1512 A ASN 1513 n 19 ASN 1513 A ILE 1514 n 20 ILE 1514 A VAL 1515 n 21 VAL 1515 A THR 1516 n 22 THR 1516 A GLN 1517 n 23 GLN 1517 A LYS 1518 n 24 LYS 1518 A MET 1519 n 25 MET 1519 A MET 1520 n 26 MET 1520 A ALA 1521 n 27 ALA 1521 A VAL 1522 n 28 VAL 1522 A PRO 1523 n 29 PRO 1523 A ASP 1524 n 30 ASP 1524 A SER 1525 n 31 SER 1525 A TRP 1526 n 32 TRP 1526 A PRO 1527 n 33 PRO 1527 A PHE 1528 n 34 PHE 1528 A HIS 1529 n 35 HIS 1529 A HIS 1530 n 36 HIS 1530 A PRO 1531 n 37 PRO 1531 A VAL 1532 n 38 VAL 1532 A ASN 1533 n 39 ASN 1533 A LYS 1534 n 40 LYS 1534 A LYS 1535 n 41 LYS 1535 A PHE 1536 n 42 PHE 1536 A VAL 1537 n 43 VAL 1537 A PRO 1538 n 44 PRO 1538 A ASP 1539 n 45 ASP 1539 A TYR 1540 n 46 TYR 1540 A TYR 1541 n 47 TYR 1541 A LYS 1542 n 48 LYS 1542 A VAL 1543 n 49 VAL 1543 A ILE 1544 n 50 ILE 1544 A VAL 1545 n 51 VAL 1545 A ASN 1546 n 52 ASN 1546 A PRO 1547 n 53 PRO 1547 A MET 1548 n 54 MET 1548 A ASP 1549 n 55 ASP 1549 A LEU 1550 n 56 LEU 1550 A GLU 1551 n 57 GLU 1551 A THR 1552 n 58 THR 1552 A ILE 1553 n 59 ILE 1553 A ARG 1554 n 60 ARG 1554 A LYS 1555 n 61 LYS 1555 A ASN 1556 n 62 ASN 1556 A ILE 1557 n 63 ILE 1557 A SER 1558 n 64 SER 1558 A LYS 1559 n 65 LYS 1559 A HIS 1560 n 66 HIS 1560 A LYS 1561 n 67 LYS 1561 A TYR 1562 n 68 TYR 1562 A GLN 1563 n 69 GLN 1563 A SER 1564 n 70 SER 1564 A ARG 1565 n 71 ARG 1565 A GLU 1566 n 72 GLU 1566 A SER 1567 n 73 SER 1567 A PHE 1568 n 74 PHE 1568 A LEU 1569 n 75 LEU 1569 A ASP 1570 n 76 ASP 1570 A ASP 1571 n 77 ASP 1571 A VAL 1572 n 78 VAL 1572 A ASN 1573 n 79 ASN 1573 A LEU 1574 n 80 LEU 1574 A ILE 1575 n 81 ILE 1575 A LEU 1576 n 82 LEU 1576 A ALA 1577 n 83 ALA 1577 A ASN 1578 n 84 ASN 1578 A SER 1579 n 85 SER 1579 A VAL 1580 n 86 VAL 1580 A LYS 1581 n 87 LYS 1581 A TYR 1582 n 88 TYR 1582 A ASN 1583 n 89 ASN 1583 A GLY 1584 n 90 GLY 1584 A PRO 1585 n 91 PRO 1585 A GLU 1586 n 92 GLU 1586 A SER 1587 n 93 SER 1587 A GLN 1588 n 94 GLN 1588 A TYR 1589 n 95 TYR 1589 A THR 1590 n 96 THR 1590 A LYS 1591 n 97 LYS 1591 A THR 1592 n 98 THR 1592 A ALA 1593 n 99 ALA 1593 A GLN 1594 n 100 GLN 1594 A GLU 1595 n 101 GLU 1595 A ILE 1596 n 102 ILE 1596 A VAL 1597 n 103 VAL 1597 A ASN 1598 n 104 ASN 1598 A VAL 1599 n 105 VAL 1599 A CYS 1600 n 106 CYS 1600 A TYR 1601 n 107 TYR 1601 A GLN 1602 n 108 GLN 1602 A THR 1603 n 109 THR 1603 A LEU 1604 n 110 LEU 1604 A THR 1605 n 111 THR 1605 A GLU 1606 n 112 GLU 1606 A TYR 1607 n 113 TYR 1607 A ASP 1608 n 114 ASP 1608 A GLU 1609 n 115 GLU 1609 A HIS 1610 n 116 HIS 1610 A LEU 1611 n 117 LEU 1611 A THR 1612 n 118 THR 1612 A GLN 1613 n 119 GLN 1613 A LEU 1614 n 120 LEU 1614 A GLU 1615 n 121 GLU 1615 A LYS 1616 n 122 LYS 1616 A ASP 1617 n 123 ASP 1617 A ILE 1618 n 124 ILE 1618 A CYS 1619 n 125 CYS 1619 A THR 1620 n 126 THR 1620 A ALA 1621 n 127 ALA 1621 A LYS 1622 n 128 LYS 1622 A GLU 1623 n 129 GLU 1623 A ALA 1624 n 130 ALA 1624 A ALA 1625 n 131 ALA 1625 A LEU 1626 n 132 LEU 1626 A GLU 1627 n 133 GLU 1627 A GLU 1628 n 134 GLU 1628 A ALA 1629 n 135 ALA 1629 A GLU 1630 n 136 GLU 1630 A n 137 1631 A n 138 1632 A n 139 1633 A n 140 1634 A n 141 1635 A n 142 1636 A n 143 1637 A n 144 1638 A n 1 1495 B n 2 1496 B n 3 1497 B n 4 1498 B n 5 1499 B n 6 1500 B n 7 1501 B ASP 1502 n 8 ASP 1502 B ASP 1503 n 9 ASP 1503 B GLN 1504 n 10 GLN 1504 B VAL 1505 n 11 VAL 1505 B ALA 1506 n 12 ALA 1506 B PHE 1507 n 13 PHE 1507 B SER 1508 n 14 SER 1508 B PHE 1509 n 15 PHE 1509 B ILE 1510 n 16 ILE 1510 B LEU 1511 n 17 LEU 1511 B ASP 1512 n 18 ASP 1512 B ASN 1513 n 19 ASN 1513 B ILE 1514 n 20 ILE 1514 B VAL 1515 n 21 VAL 1515 B THR 1516 n 22 THR 1516 B GLN 1517 n 23 GLN 1517 B LYS 1518 n 24 LYS 1518 B MET 1519 n 25 MET 1519 B MET 1520 n 26 MET 1520 B ALA 1521 n 27 ALA 1521 B VAL 1522 n 28 VAL 1522 B PRO 1523 n 29 PRO 1523 B ASP 1524 n 30 ASP 1524 B SER 1525 n 31 SER 1525 B TRP 1526 n 32 TRP 1526 B PRO 1527 n 33 PRO 1527 B PHE 1528 n 34 PHE 1528 B HIS 1529 n 35 HIS 1529 B HIS 1530 n 36 HIS 1530 B PRO 1531 n 37 PRO 1531 B VAL 1532 n 38 VAL 1532 B ASN 1533 n 39 ASN 1533 B LYS 1534 n 40 LYS 1534 B LYS 1535 n 41 LYS 1535 B PHE 1536 n 42 PHE 1536 B VAL 1537 n 43 VAL 1537 B PRO 1538 n 44 PRO 1538 B ASP 1539 n 45 ASP 1539 B TYR 1540 n 46 TYR 1540 B TYR 1541 n 47 TYR 1541 B LYS 1542 n 48 LYS 1542 B VAL 1543 n 49 VAL 1543 B ILE 1544 n 50 ILE 1544 B VAL 1545 n 51 VAL 1545 B ASN 1546 n 52 ASN 1546 B PRO 1547 n 53 PRO 1547 B MET 1548 n 54 MET 1548 B ASP 1549 n 55 ASP 1549 B LEU 1550 n 56 LEU 1550 B GLU 1551 n 57 GLU 1551 B THR 1552 n 58 THR 1552 B ILE 1553 n 59 ILE 1553 B ARG 1554 n 60 ARG 1554 B LYS 1555 n 61 LYS 1555 B ASN 1556 n 62 ASN 1556 B ILE 1557 n 63 ILE 1557 B SER 1558 n 64 SER 1558 B LYS 1559 n 65 LYS 1559 B HIS 1560 n 66 HIS 1560 B LYS 1561 n 67 LYS 1561 B TYR 1562 n 68 TYR 1562 B GLN 1563 n 69 GLN 1563 B SER 1564 n 70 SER 1564 B ARG 1565 n 71 ARG 1565 B GLU 1566 n 72 GLU 1566 B SER 1567 n 73 SER 1567 B PHE 1568 n 74 PHE 1568 B LEU 1569 n 75 LEU 1569 B ASP 1570 n 76 ASP 1570 B ASP 1571 n 77 ASP 1571 B VAL 1572 n 78 VAL 1572 B ASN 1573 n 79 ASN 1573 B LEU 1574 n 80 LEU 1574 B ILE 1575 n 81 ILE 1575 B LEU 1576 n 82 LEU 1576 B ALA 1577 n 83 ALA 1577 B ASN 1578 n 84 ASN 1578 B SER 1579 n 85 SER 1579 B VAL 1580 n 86 VAL 1580 B LYS 1581 n 87 LYS 1581 B TYR 1582 n 88 TYR 1582 B ASN 1583 n 89 ASN 1583 B GLY 1584 n 90 GLY 1584 B PRO 1585 n 91 PRO 1585 B GLU 1586 n 92 GLU 1586 B SER 1587 n 93 SER 1587 B GLN 1588 n 94 GLN 1588 B TYR 1589 n 95 TYR 1589 B THR 1590 n 96 THR 1590 B LYS 1591 n 97 LYS 1591 B THR 1592 n 98 THR 1592 B ALA 1593 n 99 ALA 1593 B GLN 1594 n 100 GLN 1594 B GLU 1595 n 101 GLU 1595 B ILE 1596 n 102 ILE 1596 B VAL 1597 n 103 VAL 1597 B ASN 1598 n 104 ASN 1598 B VAL 1599 n 105 VAL 1599 B CYS 1600 n 106 CYS 1600 B TYR 1601 n 107 TYR 1601 B GLN 1602 n 108 GLN 1602 B THR 1603 n 109 THR 1603 B LEU 1604 n 110 LEU 1604 B THR 1605 n 111 THR 1605 B GLU 1606 n 112 GLU 1606 B TYR 1607 n 113 TYR 1607 B ASP 1608 n 114 ASP 1608 B GLU 1609 n 115 GLU 1609 B HIS 1610 n 116 HIS 1610 B LEU 1611 n 117 LEU 1611 B THR 1612 n 118 THR 1612 B GLN 1613 n 119 GLN 1613 B LEU 1614 n 120 LEU 1614 B GLU 1615 n 121 GLU 1615 B LYS 1616 n 122 LYS 1616 B ASP 1617 n 123 ASP 1617 B ILE 1618 n 124 ILE 1618 B CYS 1619 n 125 CYS 1619 B THR 1620 n 126 THR 1620 B ALA 1621 n 127 ALA 1621 B LYS 1622 n 128 LYS 1622 B GLU 1623 n 129 GLU 1623 B ALA 1624 n 130 ALA 1624 B ALA 1625 n 131 ALA 1625 B LEU 1626 n 132 LEU 1626 B GLU 1627 n 133 GLU 1627 B GLU 1628 n 134 GLU 1628 B ALA 1629 n 135 ALA 1629 B n 136 1630 B n 137 1631 B n 138 1632 B n 139 1633 B n 140 1634 B n 141 1635 B n 142 1636 B n 143 1637 B n 144 1638 B SER 1 n 1 SER 1 Z GLY 2 n 2 GLY 2 Z ARG 3 n 3 ARG 3 Z GLY 4 n 4 GLY 4 Z KCR 5 n 5 KCR 5 Z GLY 6 n 6 GLY 6 Z GLY 7 n 7 GLY 7 Z KCR 8 n 8 KCR 8 Z GLY 9 n 9 GLY 9 Z LEU 10 n 10 LEU 10 Z GLY 11 n 11 GLY 11 Z 0.8715 0.8386 0.7486 1.9821 0.8307 0.8324 -0.0533 0.0980 -0.0619 -0.0256 0.1092 -0.0840 -0.0127 0.0306 -0.0559 0.0108 -0.0129 0.0167 0.0327 -0.0052 0.1195 refined -8.7053 19.4680 -0.3730 X-RAY DIFFRACTION 1.5215 -0.7002 1.0264 0.9968 -0.3677 1.8007 0.1048 0.0767 0.1187 -0.0560 -0.1504 -0.0748 -0.1723 0.0050 0.0456 0.1051 0.0486 -0.0036 0.0530 -0.0011 0.1282 refined -15.5901 50.3008 -10.9170 X-RAY DIFFRACTION A 1501 A 1630 X-RAY DIFFRACTION 1 B 1502 B 1629 X-RAY DIFFRACTION 2 author_and_software_defined_assembly PISA 3 trimeric 2900 -15 14590 Z KCR 5 modified residue C KCR 5 LYS Z KCR 8 modified residue C KCR 8 LYS 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A GLY 1495 A GLY 1 1 Y 1 A SER 1496 A SER 2 1 Y 1 A PRO 1497 A PRO 3 1 Y 1 A LEU 1498 A LEU 4 1 Y 1 A LEU 1499 A LEU 5 1 Y 1 A ASP 1500 A ASP 6 1 Y 1 A LEU 1631 A LEU 137 1 Y 1 A GLU 1632 A GLU 138 1 Y 1 A SER 1633 A SER 139 1 Y 1 A LEU 1634 A LEU 140 1 Y 1 A ASP 1635 A ASP 141 1 Y 1 A PRO 1636 A PRO 142 1 Y 1 A MET 1637 A MET 143 1 Y 1 A THR 1638 A THR 144 1 Y 1 B GLY 1495 B GLY 1 1 Y 1 B SER 1496 B SER 2 1 Y 1 B PRO 1497 B PRO 3 1 Y 1 B LEU 1498 B LEU 4 1 Y 1 B LEU 1499 B LEU 5 1 Y 1 B ASP 1500 B ASP 6 1 Y 1 B ASP 1501 B ASP 7 1 Y 1 B GLU 1630 B GLU 136 1 Y 1 B LEU 1631 B LEU 137 1 Y 1 B GLU 1632 B GLU 138 1 Y 1 B SER 1633 B SER 139 1 Y 1 B LEU 1634 B LEU 140 1 Y 1 B ASP 1635 B ASP 141 1 Y 1 B PRO 1636 B PRO 142 1 Y 1 B MET 1637 B MET 143 1 Y 1 B THR 1638 B THR 144 1 Y 1 -9.31 1.50 119.30 109.99 A A A C N CA TRP PRO PRO 1526 1527 1527 Y 1 11.34 0.90 118.30 129.64 A A A CB CG OD1 ASP ASP ASP 1570 1570 1570 N 1 -8.44 0.90 118.30 109.86 A A A CB CG OD2 ASP ASP ASP 1570 1570 1570 N 1 B B C O ASP ASP 1502 1502 0.114 0.019 1.229 1.343 N 1 A ALA 1629 -77.20 46.88 99.920 38.4630 20.470 0.0200 -0.0000 -0.0000 0.0200 0.0000 -0.0400 0.9550 0.9400 0.2433 0.2125 0.2141 1.8500 34.3000 1383 26139 5.0000 99.7800 6.4590 0.1020 RANDOM 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT 0.1470 0.1350 0.8000 0.8000 1.2000 PDB entry 1EQF MAXIMUM LIKELIHOOD MASK 1.8500 34.3000 84 2266 37.57 0 0 2182 269 0.020 0.019 2260 1.990 1.959 3067 6.326 5.000 274 40.744 26.071 112 16.337 15.000 394 21.867 15.000 5 0.135 0.200 340 0.012 0.021 1729 0.3020 0.2780 1.8940 110 1838 1948 20 97.9400 1.850 50.000 4YYN 27577 0.062 1.045 1 25.945 11.900 167197 6.100 99.900 0.833 1.850 1.920 2692 1.028 1 6.100 0 100.000 0.510 1.920 1.990 2722 1.058 1 6.200 0 100.000 0.335 1.990 2.080 2703 1.066 1 6.100 0 100.000 0.208 2.080 2.190 2723 1.053 1 6.200 0 100.000 0.142 2.190 2.330 2734 1.033 1 6.100 0 100.000 0.118 2.330 2.510 2746 1.064 1 6.200 0 100.000 0.084 2.510 2.760 2761 1.012 1 6.100 0 100.000 0.058 2.760 3.160 2763 1.041 1 6.100 0 100.000 0.051 3.160 3.990 2804 1.027 1 5.900 0 100.000 0.040 3.990 50.000 2929 1.063 1 5.700 0 99.400 data collection HKL-2000 data scaling SCALEPACK phasing PHASER refinement REFMAC 5.7.0029 data extraction PDB_EXTRACT 3.15 Crystal structure of TAF1 BD2 Bromodomain bound to a crotonyllysine peptide 1 N N 1 N N 2 N N 3 N N 3 N N 3 N N A ASP 1501 A ASP 7 HELX_P A LYS 1518 A LYS 24 1 AA1 18 A SER 1525 A SER 31 HELX_P A HIS 1530 A HIS 36 5 AA2 6 A ASP 1539 A ASP 45 HELX_P A ILE 1544 A ILE 50 1 AA3 6 A ASP 1549 A ASP 55 HELX_P A LYS 1559 A LYS 65 1 AA4 11 A SER 1564 A SER 70 HELX_P A GLY 1584 A GLY 90 1 AA5 21 A SER 1587 A SER 93 HELX_P A TYR 1607 A TYR 113 1 AA6 21 A TYR 1607 A TYR 113 HELX_P A ALA 1629 A ALA 135 1 AA7 23 B ASP 1503 B ASP 9 HELX_P B LYS 1518 B LYS 24 1 AA8 16 B SER 1525 B SER 31 HELX_P B HIS 1529 B HIS 35 5 AA9 5 B ASP 1539 B ASP 45 HELX_P B ILE 1544 B ILE 50 1 AB1 6 B ASP 1549 B ASP 55 HELX_P B LYS 1559 B LYS 65 1 AB2 11 B SER 1564 B SER 70 HELX_P B GLY 1584 B GLY 90 1 AB3 21 B SER 1587 B SER 93 HELX_P B TYR 1607 B TYR 113 1 AB4 21 B TYR 1607 B TYR 113 HELX_P B ALA 1629 B ALA 135 1 AB5 23 covale 1.325 both Z GLY 4 C C GLY 4 1_555 Z KCR 5 C N KCR 5 1_555 covale 1.330 both Z KCR 5 C C KCR 5 1_555 Z GLY 6 C N GLY 6 1_555 covale 1.325 both Z GLY 7 C C GLY 7 1_555 Z KCR 8 C N KCR 8 1_555 covale 1.337 both Z KCR 8 C C KCR 8 1_555 Z GLY 9 C N GLY 9 1_555 PROTEIN BINDING Bromodomain-crotonyllysine complex, PROTEIN BINDING TAF1_HUMAN UNP 1 1497 P21675 PLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLIL ANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMT H4_HUMAN UNP 2 2 P62805 SGRGKGGKGLG 1497 1638 4YYN 1497 1638 P21675 A 1 3 144 1497 1638 4YYN 1497 1638 P21675 B 1 3 144 2 12 4YYN 1 11 P62805 Z 2 1 11 1 expression tag GLY 1495 4YYN A P21675 UNP 1 1 expression tag SER 1496 4YYN A P21675 UNP 2 2 expression tag GLY 1495 4YYN B P21675 UNP 1 2 expression tag SER 1496 4YYN B P21675 UNP 2 19 P 21 21 21