0.015902 0.000000 0.004558 0.000000 0.012305 0.000000 0.000000 0.000000 0.015858 0.00000 0.00000 0.00000 Rouge, R. Wang, W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 105.99 90.00 62.886 81.266 65.598 C17 H21 N7 S 355.461 2-(4-aminopiperidin-1-yl)-N-(5-cyclopropyl-1H-pyrazol-3-yl)thieno[3,2-d]pyrimidin-4-amine non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C2 H6 O S 78.133 DIMETHYL SULFOXIDE non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Med.Chem. JMCMAR 0151 0022-2623 58 5121 5136 10.1021/acs.jmedchem.5b00572 26030457 Structure-Guided Design of Group I Selective p21-Activated Kinase Inhibitors. 2015 93 1 CCD 2010-06-23 MARMOSAIC 325 mm CCD SINGLE WAVELENGTH M x-ray 1 0.97946 1.0 BL9-2 SSRL 0.97946 SYNCHROTRON SSRL BEAMLINE BL9-2 33573.547 Serine/threonine-protein kinase PAK 1 2.7.11.1 Protein kinase domain residue 249-545 D389N 2 man polymer 355.461 2-(4-aminopiperidin-1-yl)-N-(5-cyclopropyl-1H-pyrazol-3-yl)thieno[3,2-d]pyrimidin-4-amine 2 syn non-polymer 96.063 SULFATE ION 1 syn non-polymer 78.133 DIMETHYL SULFOXIDE 1 syn non-polymer 18.015 water 57 nat water Alpha-PAK,p21-activated kinase 1,PAK-1,p65-PAK no no GSDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNI VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTD FGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKNNHGNS GSDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNI VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTD FGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKNNHGNS A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 301 PAK1 9606 Homo sapiens 562 Escherichia coli Biological sequence 2.40 48.74 VAPOR DIFFUSION, SITTING DROP 8 25% PEG 3500, 0.2M Ammonium Sulfate and 0.1M Tris pH 8 292 repository Initial release Database references 1 0 2015-07-01 1 1 2015-07-15 N RCSB Y RCSB 2015-05-21 REL REL 4T3 2-(4-aminopiperidin-1-yl)-N-(5-cyclopropyl-1H-pyrazol-3-yl)thieno[3,2-d]pyrimidin-4-amine SO4 SULFATE ION DMS DIMETHYL SULFOXIDE HOH water LIG 1 2 4T3 4T3 601 A SO4 1 3 SO4 SO4 602 A LIG 1 2 4T3 4T3 601 B DMS 1 4 DMS DMS 602 B HOH 42 5 HOH HOH 701 A HOH 54 5 HOH HOH 702 A HOH 52 5 HOH HOH 703 A HOH 10 5 HOH HOH 704 A HOH 53 5 HOH HOH 705 A HOH 8 5 HOH HOH 706 A HOH 56 5 HOH HOH 707 A HOH 41 5 HOH HOH 708 A HOH 7 5 HOH HOH 709 A HOH 6 5 HOH HOH 710 A HOH 51 5 HOH HOH 711 A HOH 9 5 HOH HOH 712 A HOH 1 5 HOH HOH 713 A HOH 30 5 HOH HOH 714 A HOH 5 5 HOH HOH 715 A HOH 4 5 HOH HOH 716 A HOH 58 5 HOH HOH 717 A HOH 43 5 HOH HOH 718 A HOH 3 5 HOH HOH 719 A HOH 55 5 HOH HOH 720 A HOH 57 5 HOH HOH 721 A HOH 40 5 HOH HOH 722 A HOH 24 5 HOH HOH 701 B HOH 32 5 HOH HOH 702 B HOH 39 5 HOH HOH 703 B HOH 12 5 HOH HOH 704 B HOH 37 5 HOH HOH 705 B HOH 26 5 HOH HOH 706 B HOH 28 5 HOH HOH 707 B HOH 15 5 HOH HOH 708 B HOH 48 5 HOH HOH 709 B HOH 36 5 HOH HOH 710 B HOH 19 5 HOH HOH 711 B HOH 23 5 HOH HOH 712 B HOH 22 5 HOH HOH 713 B HOH 29 5 HOH HOH 714 B HOH 13 5 HOH HOH 715 B HOH 38 5 HOH HOH 716 B HOH 20 5 HOH HOH 717 B HOH 18 5 HOH HOH 718 B HOH 14 5 HOH HOH 719 B HOH 11 5 HOH HOH 720 B HOH 17 5 HOH HOH 721 B HOH 49 5 HOH HOH 722 B HOH 31 5 HOH HOH 723 B HOH 50 5 HOH HOH 724 B HOH 27 5 HOH HOH 725 B HOH 44 5 HOH HOH 726 B HOH 45 5 HOH HOH 727 B HOH 47 5 HOH HOH 728 B HOH 16 5 HOH HOH 729 B HOH 21 5 HOH HOH 730 B HOH 35 5 HOH HOH 731 B HOH 25 5 HOH HOH 732 B HOH 34 5 HOH HOH 733 B HOH 33 5 HOH HOH 734 B HOH 46 5 HOH HOH 735 B n 1 248 A SER 249 n 2 SER 249 A ASP 250 n 3 ASP 250 A GLU 251 n 4 GLU 251 A GLU 252 n 5 GLU 252 A ILE 253 n 6 ILE 253 A LEU 254 n 7 LEU 254 A GLU 255 n 8 GLU 255 A LYS 256 n 9 LYS 256 A LEU 257 n 10 LEU 257 A ARG 258 n 11 ARG 258 A SER 259 n 12 SER 259 A ILE 260 n 13 ILE 260 A VAL 261 n 14 VAL 261 A SER 262 n 15 SER 262 A VAL 263 n 16 VAL 263 A GLY 264 n 17 GLY 264 A ASP 265 n 18 ASP 265 A PRO 266 n 19 PRO 266 A LYS 267 n 20 LYS 267 A LYS 268 n 21 LYS 268 A LYS 269 n 22 LYS 269 A TYR 270 n 23 TYR 270 A THR 271 n 24 THR 271 A ARG 272 n 25 ARG 272 A PHE 273 n 26 PHE 273 A GLU 274 n 27 GLU 274 A LYS 275 n 28 LYS 275 A ILE 276 n 29 ILE 276 A GLY 277 n 30 GLY 277 A GLN 278 n 31 GLN 278 A GLY 279 n 32 GLY 279 A ALA 280 n 33 ALA 280 A SER 281 n 34 SER 281 A GLY 282 n 35 GLY 282 A THR 283 n 36 THR 283 A VAL 284 n 37 VAL 284 A TYR 285 n 38 TYR 285 A THR 286 n 39 THR 286 A ALA 287 n 40 ALA 287 A MET 288 n 41 MET 288 A ASP 289 n 42 ASP 289 A VAL 290 n 43 VAL 290 A ALA 291 n 44 ALA 291 A THR 292 n 45 THR 292 A GLY 293 n 46 GLY 293 A GLN 294 n 47 GLN 294 A GLU 295 n 48 GLU 295 A VAL 296 n 49 VAL 296 A ALA 297 n 50 ALA 297 A ILE 298 n 51 ILE 298 A LYS 299 n 52 LYS 299 A GLN 300 n 53 GLN 300 A n 54 301 A n 55 302 A n 56 303 A n 57 304 A n 58 305 A GLN 306 n 59 GLN 306 A PRO 307 n 60 PRO 307 A LYS 308 n 61 LYS 308 A LYS 309 n 62 LYS 309 A GLU 310 n 63 GLU 310 A LEU 311 n 64 LEU 311 A ILE 312 n 65 ILE 312 A ILE 313 n 66 ILE 313 A ASN 314 n 67 ASN 314 A GLU 315 n 68 GLU 315 A ILE 316 n 69 ILE 316 A LEU 317 n 70 LEU 317 A VAL 318 n 71 VAL 318 A MET 319 n 72 MET 319 A ARG 320 n 73 ARG 320 A GLU 321 n 74 GLU 321 A ASN 322 n 75 ASN 322 A LYS 323 n 76 LYS 323 A ASN 324 n 77 ASN 324 A PRO 325 n 78 PRO 325 A ASN 326 n 79 ASN 326 A ILE 327 n 80 ILE 327 A VAL 328 n 81 VAL 328 A ASN 329 n 82 ASN 329 A TYR 330 n 83 TYR 330 A LEU 331 n 84 LEU 331 A ASP 332 n 85 ASP 332 A SER 333 n 86 SER 333 A TYR 334 n 87 TYR 334 A LEU 335 n 88 LEU 335 A VAL 336 n 89 VAL 336 A GLY 337 n 90 GLY 337 A ASP 338 n 91 ASP 338 A GLU 339 n 92 GLU 339 A LEU 340 n 93 LEU 340 A TRP 341 n 94 TRP 341 A VAL 342 n 95 VAL 342 A VAL 343 n 96 VAL 343 A MET 344 n 97 MET 344 A GLU 345 n 98 GLU 345 A TYR 346 n 99 TYR 346 A LEU 347 n 100 LEU 347 A ALA 348 n 101 ALA 348 A GLY 349 n 102 GLY 349 A GLY 350 n 103 GLY 350 A SER 351 n 104 SER 351 A LEU 352 n 105 LEU 352 A THR 353 n 106 THR 353 A ASP 354 n 107 ASP 354 A VAL 355 n 108 VAL 355 A VAL 356 n 109 VAL 356 A THR 357 n 110 THR 357 A GLU 358 n 111 GLU 358 A THR 359 n 112 THR 359 A CYS 360 n 113 CYS 360 A MET 361 n 114 MET 361 A ASP 362 n 115 ASP 362 A GLU 363 n 116 GLU 363 A GLY 364 n 117 GLY 364 A GLN 365 n 118 GLN 365 A ILE 366 n 119 ILE 366 A ALA 367 n 120 ALA 367 A ALA 368 n 121 ALA 368 A VAL 369 n 122 VAL 369 A CYS 370 n 123 CYS 370 A ARG 371 n 124 ARG 371 A GLU 372 n 125 GLU 372 A CYS 373 n 126 CYS 373 A LEU 374 n 127 LEU 374 A GLN 375 n 128 GLN 375 A ALA 376 n 129 ALA 376 A LEU 377 n 130 LEU 377 A GLU 378 n 131 GLU 378 A PHE 379 n 132 PHE 379 A LEU 380 n 133 LEU 380 A HIS 381 n 134 HIS 381 A SER 382 n 135 SER 382 A ASN 383 n 136 ASN 383 A GLN 384 n 137 GLN 384 A VAL 385 n 138 VAL 385 A ILE 386 n 139 ILE 386 A HIS 387 n 140 HIS 387 A ARG 388 n 141 ARG 388 A ASN 389 n 142 ASN 389 A ILE 390 n 143 ILE 390 A LYS 391 n 144 LYS 391 A SER 392 n 145 SER 392 A ASP 393 n 146 ASP 393 A ASN 394 n 147 ASN 394 A ILE 395 n 148 ILE 395 A LEU 396 n 149 LEU 396 A LEU 397 n 150 LEU 397 A GLY 398 n 151 GLY 398 A MET 399 n 152 MET 399 A ASP 400 n 153 ASP 400 A GLY 401 n 154 GLY 401 A SER 402 n 155 SER 402 A VAL 403 n 156 VAL 403 A LYS 404 n 157 LYS 404 A LEU 405 n 158 LEU 405 A THR 406 n 159 THR 406 A ASP 407 n 160 ASP 407 A PHE 408 n 161 PHE 408 A GLY 409 n 162 GLY 409 A PHE 410 n 163 PHE 410 A CYS 411 n 164 CYS 411 A ALA 412 n 165 ALA 412 A GLN 413 n 166 GLN 413 A ILE 414 n 167 ILE 414 A THR 415 n 168 THR 415 A PRO 416 n 169 PRO 416 A GLU 417 n 170 GLU 417 A GLN 418 n 171 GLN 418 A SER 419 n 172 SER 419 A LYS 420 n 173 LYS 420 A ARG 421 n 174 ARG 421 A SER 422 n 175 SER 422 A THR 423 n 176 THR 423 A MET 424 n 177 MET 424 A VAL 425 n 178 VAL 425 A GLY 426 n 179 GLY 426 A THR 427 n 180 THR 427 A PRO 428 n 181 PRO 428 A TYR 429 n 182 TYR 429 A TRP 430 n 183 TRP 430 A MET 431 n 184 MET 431 A ALA 432 n 185 ALA 432 A PRO 433 n 186 PRO 433 A GLU 434 n 187 GLU 434 A VAL 435 n 188 VAL 435 A VAL 436 n 189 VAL 436 A THR 437 n 190 THR 437 A ARG 438 n 191 ARG 438 A LYS 439 n 192 LYS 439 A ALA 440 n 193 ALA 440 A TYR 441 n 194 TYR 441 A GLY 442 n 195 GLY 442 A PRO 443 n 196 PRO 443 A LYS 444 n 197 LYS 444 A VAL 445 n 198 VAL 445 A ASP 446 n 199 ASP 446 A ILE 447 n 200 ILE 447 A TRP 448 n 201 TRP 448 A SER 449 n 202 SER 449 A LEU 450 n 203 LEU 450 A GLY 451 n 204 GLY 451 A ILE 452 n 205 ILE 452 A MET 453 n 206 MET 453 A ALA 454 n 207 ALA 454 A ILE 455 n 208 ILE 455 A GLU 456 n 209 GLU 456 A MET 457 n 210 MET 457 A ILE 458 n 211 ILE 458 A GLU 459 n 212 GLU 459 A GLY 460 n 213 GLY 460 A GLU 461 n 214 GLU 461 A PRO 462 n 215 PRO 462 A PRO 463 n 216 PRO 463 A TYR 464 n 217 TYR 464 A LEU 465 n 218 LEU 465 A ASN 466 n 219 ASN 466 A GLU 467 n 220 GLU 467 A ASN 468 n 221 ASN 468 A PRO 469 n 222 PRO 469 A LEU 470 n 223 LEU 470 A ARG 471 n 224 ARG 471 A ALA 472 n 225 ALA 472 A LEU 473 n 226 LEU 473 A TYR 474 n 227 TYR 474 A LEU 475 n 228 LEU 475 A ILE 476 n 229 ILE 476 A ALA 477 n 230 ALA 477 A THR 478 n 231 THR 478 A ASN 479 n 232 ASN 479 A GLY 480 n 233 GLY 480 A THR 481 n 234 THR 481 A PRO 482 n 235 PRO 482 A GLU 483 n 236 GLU 483 A LEU 484 n 237 LEU 484 A GLN 485 n 238 GLN 485 A ASN 486 n 239 ASN 486 A PRO 487 n 240 PRO 487 A GLU 488 n 241 GLU 488 A LYS 489 n 242 LYS 489 A LEU 490 n 243 LEU 490 A SER 491 n 244 SER 491 A ALA 492 n 245 ALA 492 A ILE 493 n 246 ILE 493 A PHE 494 n 247 PHE 494 A ARG 495 n 248 ARG 495 A ASP 496 n 249 ASP 496 A PHE 497 n 250 PHE 497 A LEU 498 n 251 LEU 498 A ASN 499 n 252 ASN 499 A ARG 500 n 253 ARG 500 A CYS 501 n 254 CYS 501 A LEU 502 n 255 LEU 502 A GLU 503 n 256 GLU 503 A MET 504 n 257 MET 504 A ASP 505 n 258 ASP 505 A VAL 506 n 259 VAL 506 A GLU 507 n 260 GLU 507 A LYS 508 n 261 LYS 508 A ARG 509 n 262 ARG 509 A GLY 510 n 263 GLY 510 A SER 511 n 264 SER 511 A ALA 512 n 265 ALA 512 A LYS 513 n 266 LYS 513 A GLU 514 n 267 GLU 514 A LEU 515 n 268 LEU 515 A LEU 516 n 269 LEU 516 A GLN 517 n 270 GLN 517 A HIS 518 n 271 HIS 518 A GLN 519 n 272 GLN 519 A PHE 520 n 273 PHE 520 A LEU 521 n 274 LEU 521 A LYS 522 n 275 LYS 522 A ILE 523 n 276 ILE 523 A ALA 524 n 277 ALA 524 A LYS 525 n 278 LYS 525 A PRO 526 n 279 PRO 526 A LEU 527 n 280 LEU 527 A SER 528 n 281 SER 528 A SER 529 n 282 SER 529 A LEU 530 n 283 LEU 530 A THR 531 n 284 THR 531 A PRO 532 n 285 PRO 532 A LEU 533 n 286 LEU 533 A ILE 534 n 287 ILE 534 A ALA 535 n 288 ALA 535 A ALA 536 n 289 ALA 536 A ALA 537 n 290 ALA 537 A LYS 538 n 291 LYS 538 A GLU 539 n 292 GLU 539 A ALA 540 n 293 ALA 540 A THR 541 n 294 THR 541 A n 295 542 A n 296 543 A n 297 544 A n 298 545 A n 299 546 A n 300 547 A n 301 548 A n 1 248 B SER 249 n 2 SER 249 B ASP 250 n 3 ASP 250 B GLU 251 n 4 GLU 251 B GLU 252 n 5 GLU 252 B ILE 253 n 6 ILE 253 B LEU 254 n 7 LEU 254 B GLU 255 n 8 GLU 255 B LYS 256 n 9 LYS 256 B LEU 257 n 10 LEU 257 B ARG 258 n 11 ARG 258 B SER 259 n 12 SER 259 B ILE 260 n 13 ILE 260 B VAL 261 n 14 VAL 261 B SER 262 n 15 SER 262 B VAL 263 n 16 VAL 263 B GLY 264 n 17 GLY 264 B ASP 265 n 18 ASP 265 B PRO 266 n 19 PRO 266 B LYS 267 n 20 LYS 267 B LYS 268 n 21 LYS 268 B LYS 269 n 22 LYS 269 B TYR 270 n 23 TYR 270 B THR 271 n 24 THR 271 B ARG 272 n 25 ARG 272 B PHE 273 n 26 PHE 273 B GLU 274 n 27 GLU 274 B LYS 275 n 28 LYS 275 B ILE 276 n 29 ILE 276 B GLY 277 n 30 GLY 277 B GLN 278 n 31 GLN 278 B GLY 279 n 32 GLY 279 B ALA 280 n 33 ALA 280 B SER 281 n 34 SER 281 B GLY 282 n 35 GLY 282 B THR 283 n 36 THR 283 B VAL 284 n 37 VAL 284 B TYR 285 n 38 TYR 285 B THR 286 n 39 THR 286 B ALA 287 n 40 ALA 287 B MET 288 n 41 MET 288 B ASP 289 n 42 ASP 289 B VAL 290 n 43 VAL 290 B ALA 291 n 44 ALA 291 B THR 292 n 45 THR 292 B GLY 293 n 46 GLY 293 B GLN 294 n 47 GLN 294 B GLU 295 n 48 GLU 295 B VAL 296 n 49 VAL 296 B ALA 297 n 50 ALA 297 B ILE 298 n 51 ILE 298 B LYS 299 n 52 LYS 299 B GLN 300 n 53 GLN 300 B MET 301 n 54 MET 301 B ASN 302 n 55 ASN 302 B LEU 303 n 56 LEU 303 B GLN 304 n 57 GLN 304 B GLN 305 n 58 GLN 305 B n 59 306 B PRO 307 n 60 PRO 307 B LYS 308 n 61 LYS 308 B LYS 309 n 62 LYS 309 B GLU 310 n 63 GLU 310 B LEU 311 n 64 LEU 311 B ILE 312 n 65 ILE 312 B ILE 313 n 66 ILE 313 B ASN 314 n 67 ASN 314 B GLU 315 n 68 GLU 315 B ILE 316 n 69 ILE 316 B LEU 317 n 70 LEU 317 B VAL 318 n 71 VAL 318 B MET 319 n 72 MET 319 B ARG 320 n 73 ARG 320 B GLU 321 n 74 GLU 321 B ASN 322 n 75 ASN 322 B LYS 323 n 76 LYS 323 B ASN 324 n 77 ASN 324 B PRO 325 n 78 PRO 325 B ASN 326 n 79 ASN 326 B ILE 327 n 80 ILE 327 B VAL 328 n 81 VAL 328 B ASN 329 n 82 ASN 329 B TYR 330 n 83 TYR 330 B LEU 331 n 84 LEU 331 B ASP 332 n 85 ASP 332 B SER 333 n 86 SER 333 B TYR 334 n 87 TYR 334 B LEU 335 n 88 LEU 335 B VAL 336 n 89 VAL 336 B GLY 337 n 90 GLY 337 B ASP 338 n 91 ASP 338 B GLU 339 n 92 GLU 339 B LEU 340 n 93 LEU 340 B TRP 341 n 94 TRP 341 B VAL 342 n 95 VAL 342 B VAL 343 n 96 VAL 343 B MET 344 n 97 MET 344 B GLU 345 n 98 GLU 345 B TYR 346 n 99 TYR 346 B LEU 347 n 100 LEU 347 B ALA 348 n 101 ALA 348 B GLY 349 n 102 GLY 349 B GLY 350 n 103 GLY 350 B SER 351 n 104 SER 351 B LEU 352 n 105 LEU 352 B THR 353 n 106 THR 353 B ASP 354 n 107 ASP 354 B VAL 355 n 108 VAL 355 B VAL 356 n 109 VAL 356 B THR 357 n 110 THR 357 B GLU 358 n 111 GLU 358 B THR 359 n 112 THR 359 B CYS 360 n 113 CYS 360 B MET 361 n 114 MET 361 B ASP 362 n 115 ASP 362 B GLU 363 n 116 GLU 363 B GLY 364 n 117 GLY 364 B GLN 365 n 118 GLN 365 B ILE 366 n 119 ILE 366 B ALA 367 n 120 ALA 367 B ALA 368 n 121 ALA 368 B VAL 369 n 122 VAL 369 B CYS 370 n 123 CYS 370 B ARG 371 n 124 ARG 371 B GLU 372 n 125 GLU 372 B CYS 373 n 126 CYS 373 B LEU 374 n 127 LEU 374 B GLN 375 n 128 GLN 375 B ALA 376 n 129 ALA 376 B LEU 377 n 130 LEU 377 B GLU 378 n 131 GLU 378 B PHE 379 n 132 PHE 379 B LEU 380 n 133 LEU 380 B HIS 381 n 134 HIS 381 B SER 382 n 135 SER 382 B ASN 383 n 136 ASN 383 B GLN 384 n 137 GLN 384 B VAL 385 n 138 VAL 385 B ILE 386 n 139 ILE 386 B HIS 387 n 140 HIS 387 B ARG 388 n 141 ARG 388 B ASN 389 n 142 ASN 389 B ILE 390 n 143 ILE 390 B LYS 391 n 144 LYS 391 B SER 392 n 145 SER 392 B ASP 393 n 146 ASP 393 B ASN 394 n 147 ASN 394 B ILE 395 n 148 ILE 395 B LEU 396 n 149 LEU 396 B LEU 397 n 150 LEU 397 B GLY 398 n 151 GLY 398 B MET 399 n 152 MET 399 B ASP 400 n 153 ASP 400 B GLY 401 n 154 GLY 401 B SER 402 n 155 SER 402 B VAL 403 n 156 VAL 403 B LYS 404 n 157 LYS 404 B LEU 405 n 158 LEU 405 B THR 406 n 159 THR 406 B ASP 407 n 160 ASP 407 B PHE 408 n 161 PHE 408 B GLY 409 n 162 GLY 409 B PHE 410 n 163 PHE 410 B CYS 411 n 164 CYS 411 B ALA 412 n 165 ALA 412 B GLN 413 n 166 GLN 413 B ILE 414 n 167 ILE 414 B THR 415 n 168 THR 415 B PRO 416 n 169 PRO 416 B GLU 417 n 170 GLU 417 B GLN 418 n 171 GLN 418 B SER 419 n 172 SER 419 B LYS 420 n 173 LYS 420 B ARG 421 n 174 ARG 421 B SER 422 n 175 SER 422 B THR 423 n 176 THR 423 B MET 424 n 177 MET 424 B VAL 425 n 178 VAL 425 B GLY 426 n 179 GLY 426 B THR 427 n 180 THR 427 B PRO 428 n 181 PRO 428 B TYR 429 n 182 TYR 429 B TRP 430 n 183 TRP 430 B MET 431 n 184 MET 431 B ALA 432 n 185 ALA 432 B PRO 433 n 186 PRO 433 B GLU 434 n 187 GLU 434 B VAL 435 n 188 VAL 435 B VAL 436 n 189 VAL 436 B THR 437 n 190 THR 437 B ARG 438 n 191 ARG 438 B LYS 439 n 192 LYS 439 B ALA 440 n 193 ALA 440 B TYR 441 n 194 TYR 441 B GLY 442 n 195 GLY 442 B PRO 443 n 196 PRO 443 B LYS 444 n 197 LYS 444 B VAL 445 n 198 VAL 445 B ASP 446 n 199 ASP 446 B ILE 447 n 200 ILE 447 B TRP 448 n 201 TRP 448 B SER 449 n 202 SER 449 B LEU 450 n 203 LEU 450 B GLY 451 n 204 GLY 451 B ILE 452 n 205 ILE 452 B MET 453 n 206 MET 453 B ALA 454 n 207 ALA 454 B ILE 455 n 208 ILE 455 B GLU 456 n 209 GLU 456 B MET 457 n 210 MET 457 B ILE 458 n 211 ILE 458 B GLU 459 n 212 GLU 459 B GLY 460 n 213 GLY 460 B GLU 461 n 214 GLU 461 B PRO 462 n 215 PRO 462 B PRO 463 n 216 PRO 463 B TYR 464 n 217 TYR 464 B LEU 465 n 218 LEU 465 B ASN 466 n 219 ASN 466 B GLU 467 n 220 GLU 467 B ASN 468 n 221 ASN 468 B PRO 469 n 222 PRO 469 B LEU 470 n 223 LEU 470 B ARG 471 n 224 ARG 471 B ALA 472 n 225 ALA 472 B LEU 473 n 226 LEU 473 B TYR 474 n 227 TYR 474 B LEU 475 n 228 LEU 475 B ILE 476 n 229 ILE 476 B ALA 477 n 230 ALA 477 B THR 478 n 231 THR 478 B ASN 479 n 232 ASN 479 B GLY 480 n 233 GLY 480 B THR 481 n 234 THR 481 B PRO 482 n 235 PRO 482 B GLU 483 n 236 GLU 483 B LEU 484 n 237 LEU 484 B GLN 485 n 238 GLN 485 B ASN 486 n 239 ASN 486 B PRO 487 n 240 PRO 487 B GLU 488 n 241 GLU 488 B LYS 489 n 242 LYS 489 B LEU 490 n 243 LEU 490 B SER 491 n 244 SER 491 B ALA 492 n 245 ALA 492 B ILE 493 n 246 ILE 493 B PHE 494 n 247 PHE 494 B ARG 495 n 248 ARG 495 B ASP 496 n 249 ASP 496 B PHE 497 n 250 PHE 497 B LEU 498 n 251 LEU 498 B ASN 499 n 252 ASN 499 B ARG 500 n 253 ARG 500 B CYS 501 n 254 CYS 501 B LEU 502 n 255 LEU 502 B GLU 503 n 256 GLU 503 B MET 504 n 257 MET 504 B ASP 505 n 258 ASP 505 B VAL 506 n 259 VAL 506 B GLU 507 n 260 GLU 507 B LYS 508 n 261 LYS 508 B ARG 509 n 262 ARG 509 B GLY 510 n 263 GLY 510 B SER 511 n 264 SER 511 B ALA 512 n 265 ALA 512 B LYS 513 n 266 LYS 513 B GLU 514 n 267 GLU 514 B LEU 515 n 268 LEU 515 B LEU 516 n 269 LEU 516 B GLN 517 n 270 GLN 517 B HIS 518 n 271 HIS 518 B GLN 519 n 272 GLN 519 B PHE 520 n 273 PHE 520 B LEU 521 n 274 LEU 521 B LYS 522 n 275 LYS 522 B ILE 523 n 276 ILE 523 B ALA 524 n 277 ALA 524 B LYS 525 n 278 LYS 525 B PRO 526 n 279 PRO 526 B LEU 527 n 280 LEU 527 B SER 528 n 281 SER 528 B SER 529 n 282 SER 529 B LEU 530 n 283 LEU 530 B THR 531 n 284 THR 531 B PRO 532 n 285 PRO 532 B LEU 533 n 286 LEU 533 B ILE 534 n 287 ILE 534 B ALA 535 n 288 ALA 535 B ALA 536 n 289 ALA 536 B ALA 537 n 290 ALA 537 B LYS 538 n 291 LYS 538 B GLU 539 n 292 GLU 539 B ALA 540 n 293 ALA 540 B THR 541 n 294 THR 541 B n 295 542 B n 296 543 B n 297 544 B n 298 545 B n 299 546 B n 300 547 B n 301 548 B 0.4875 0.2207 -0.3676 0.4748 -0.1044 0.4552 -0.5323 0.5947 -0.8551 -0.1087 0.1559 0.1643 -0.1281 -0.3972 -0.2233 0.5050 0.0128 0.0896 0.7165 -0.2304 0.7689 refined 22.1204 -20.6544 6.7888 X-RAY DIFFRACTION 1.3041 -0.0964 -0.1404 0.8542 0.3135 1.3101 -0.1406 -0.0493 -0.0639 0.0411 0.1224 -0.1078 -0.1158 0.2639 0.0000 0.2960 0.0109 -0.0322 0.3250 -0.0097 0.2503 refined 24.7699 0.5385 21.1922 X-RAY DIFFRACTION 0.3873 -0.0481 0.0389 0.4661 0.4854 0.4982 -0.1185 -0.2539 -0.1114 0.3300 0.1333 0.1358 0.5103 -0.0237 -0.0000 0.5118 -0.0029 0.0370 0.4644 -0.0722 0.4921 refined -3.2687 -14.4954 -14.4131 X-RAY DIFFRACTION 0.7307 0.2828 0.1406 0.2285 -0.2754 0.5337 -0.0707 -0.1219 0.0961 0.0317 0.0397 0.0343 0.0557 -0.0116 -0.0000 0.2535 0.0199 -0.0015 0.2225 -0.0109 0.2574 refined 15.0553 5.8490 -16.0666 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 chain A and resid 249:346 X-RAY DIFFRACTION 2 chain A and resid 347:541 or chain A and resid 601 X-RAY DIFFRACTION 3 chain B and resid 249:346 X-RAY DIFFRACTION 4 chain B and resid 347:541 or chain B and resid 601 author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLU 274 A N GLU 27 A O THR 286 A O THR 39 A N ALA 287 A N ALA 40 A O VAL 296 A O VAL 49 A N ALA 297 A N ALA 50 A O MET 344 A O MET 97 A O VAL 343 A O VAL 96 A N LEU 331 A N LEU 84 A N GLY 350 A N GLY 103 A O LEU 397 A O LEU 150 A N LEU 396 A N LEU 149 A O LYS 404 A O LYS 157 A N ILE 386 A N ILE 139 A O ALA 412 A O ALA 165 B N GLU 274 B N GLU 27 B O THR 286 B O THR 39 B N TYR 285 B N TYR 38 B O ILE 298 B O ILE 51 B N MET 301 B N MET 54 B O LEU 340 B O LEU 93 B O VAL 343 B O VAL 96 B N LEU 331 B N LEU 84 B N LEU 396 B N LEU 149 B O LYS 404 B O LYS 157 1 A CG ASP 250 A CG ASP 3 1 Y 1 A OD1 ASP 250 A OD1 ASP 3 1 Y 1 A OD2 ASP 250 A OD2 ASP 3 1 Y 1 A CG ARG 272 A CG ARG 25 1 Y 1 A CD ARG 272 A CD ARG 25 1 Y 1 A NE ARG 272 A NE ARG 25 1 Y 1 A CZ ARG 272 A CZ ARG 25 1 Y 1 A NH1 ARG 272 A NH1 ARG 25 1 Y 1 A NH2 ARG 272 A NH2 ARG 25 1 Y 1 A CG GLN 278 A CG GLN 31 1 Y 1 A CD GLN 278 A CD GLN 31 1 Y 1 A OE1 GLN 278 A OE1 GLN 31 1 Y 1 A NE2 GLN 278 A NE2 GLN 31 1 Y 1 A CG LYS 439 A CG LYS 192 1 Y 1 A CD LYS 439 A CD LYS 192 1 Y 1 A CE LYS 439 A CE LYS 192 1 Y 1 A NZ LYS 439 A NZ LYS 192 1 Y 1 B CG GLU 251 B CG GLU 4 1 Y 1 B CD GLU 251 B CD GLU 4 1 Y 1 B OE1 GLU 251 B OE1 GLU 4 1 Y 1 B OE2 GLU 251 B OE2 GLU 4 1 Y 1 B CG ARG 258 B CG ARG 11 1 Y 1 B CD ARG 258 B CD ARG 11 1 Y 1 B NE ARG 258 B NE ARG 11 1 Y 1 B CZ ARG 258 B CZ ARG 11 1 Y 1 B NH1 ARG 258 B NH1 ARG 11 1 Y 1 B NH2 ARG 258 B NH2 ARG 11 1 Y 1 B CG GLN 304 B CG GLN 57 1 Y 1 B CD GLN 304 B CD GLN 57 1 Y 1 B OE1 GLN 304 B OE1 GLN 57 1 Y 1 B NE2 GLN 304 B NE2 GLN 57 1 Y 1 B CG LYS 309 B CG LYS 62 1 Y 1 B CD LYS 309 B CD LYS 62 1 Y 1 B CE LYS 309 B CE LYS 62 1 Y 1 B NZ LYS 309 B NZ LYS 62 1 Y 1 B CG ASP 338 B CG ASP 91 1 Y 1 B OD1 ASP 338 B OD1 ASP 91 1 Y 1 B OD2 ASP 338 B OD2 ASP 91 1 Y 1 B CG GLN 485 B CG GLN 238 1 Y 1 B CD GLN 485 B CD GLN 238 1 Y 1 B OE1 GLN 485 B OE1 GLN 238 1 Y 1 B NE2 GLN 485 B NE2 GLN 238 1 Y 1 A GLY 248 A GLY 1 1 Y 1 A MET 301 A MET 54 1 Y 1 A ASN 302 A ASN 55 1 Y 1 A LEU 303 A LEU 56 1 Y 1 A GLN 304 A GLN 57 1 Y 1 A GLN 305 A GLN 58 1 Y 1 A LYS 542 A LYS 295 1 Y 1 A ASN 543 A ASN 296 1 Y 1 A ASN 544 A ASN 297 1 Y 1 A HIS 545 A HIS 298 1 Y 1 A GLY 546 A GLY 299 1 Y 1 A ASN 547 A ASN 300 1 Y 1 A SER 548 A SER 301 1 Y 1 B GLY 248 B GLY 1 1 Y 1 B GLN 306 B GLN 59 1 Y 1 B LYS 542 B LYS 295 1 Y 1 B ASN 543 B ASN 296 1 Y 1 B ASN 544 B ASN 297 1 Y 1 B HIS 545 B HIS 298 1 Y 1 B GLY 546 B GLY 299 1 Y 1 B ASN 547 B ASN 300 1 Y 1 B SER 548 B SER 301 1 Y 1 B B O NZ ALA LYS 348 538 2.15 1 A GLN 278 -171.86 135.65 1 A ALA 280 53.70 -84.58 1 A TYR 285 -122.23 -164.89 1 A LYS 308 45.69 73.59 1 A LEU 331 -115.78 -84.22 1 A LEU 335 -155.67 15.81 1 A TRP 341 -114.82 66.33 1 A ASN 389 -144.80 40.67 1 A ASP 407 61.35 95.10 1 A SER 422 -153.91 16.89 1 A ARG 438 -54.49 73.61 1 B GLN 278 -168.79 89.62 1 B GLN 304 -53.33 84.36 1 B LEU 331 -100.10 -61.08 1 B ASP 338 58.99 7.59 1 B ARG 388 68.83 -12.31 1 B TYR 464 60.76 -14.09 0.2482 0.1921 0.1950 2.60 34.898 916 18181 5.04 92.31 0.40 1 FREE R-VALUE 1.35 MOLECULAR REPLACEMENT 28.79 0.90 1.11 ML FLAT BULK SOLVENT MODEL 2.60 34.898 57 4605 59 0 4489 0.004 4629 0.893 6270 14.415 1730 0.030 723 0.004 797 0.3725 0.2527 2.7355 92 1737 65.00 0.3398 0.2452 2.9068 128 2225 84.00 0.3099 0.2337 3.1311 129 2581 97.00 0.2877 0.2183 3.4459 155 2633 100.00 0.2243 0.1848 3.9439 136 2680 100.00 0.2070 0.1666 4.9667 138 2670 100.00 0.2252 0.1741 34.9014 138 2739 100.00 2.6 50 4ZY4 5203 1 20.4 3.5 92.4 refinement PHENIX 1.9_1692 data reduction HKL-2000 data scaling HKL-2000 phasing PHASER Serine/threonine-protein kinase PAK 1 (E.C.2.7.11.1) Crystal structure of P21 activated kinase 1 in complex with an inhibitor compound 4 1 N N 1 N N 2 N N 3 N N 2 N N 4 N N 5 N N 5 N N A ILE 253 A ILE 6 HELX_P A VAL 261 A VAL 14 1 AA1 9 A ASP 265 A ASP 18 HELX_P A LYS 268 A LYS 21 5 AA2 4 A LYS 309 A LYS 62 HELX_P A GLU 321 A GLU 74 1 AA3 13 A LEU 352 A LEU 105 HELX_P A THR 359 A THR 112 1 AA4 8 A ASP 362 A ASP 115 HELX_P A ASN 383 A ASN 136 1 AA5 22 A LYS 391 A LYS 144 HELX_P A ASP 393 A ASP 146 5 AA6 3 A THR 427 A THR 180 HELX_P A MET 431 A MET 184 5 AA7 5 A ALA 432 A ALA 185 HELX_P A THR 437 A THR 190 1 AA8 6 A PRO 443 A PRO 196 HELX_P A GLY 460 A GLY 213 1 AA9 18 A ASN 468 A ASN 221 HELX_P A GLY 480 A GLY 233 1 AB1 13 A ASN 486 A ASN 239 HELX_P A LEU 490 A LEU 243 5 AB2 5 A SER 491 A SER 244 HELX_P A LEU 502 A LEU 255 1 AB3 12 A SER 511 A SER 264 HELX_P A LEU 516 A LEU 269 1 AB4 6 A GLN 517 A GLN 270 HELX_P A ALA 524 A ALA 277 5 AB5 8 A PRO 526 A PRO 279 HELX_P A SER 529 A SER 282 5 AB6 4 A LEU 530 A LEU 283 HELX_P A GLU 539 A GLU 292 1 AB7 10 B ASP 250 B ASP 3 HELX_P B VAL 261 B VAL 14 1 AB8 12 B ASP 265 B ASP 18 HELX_P B LYS 269 B LYS 22 1 AB9 5 B LYS 308 B LYS 61 HELX_P B ASN 322 B ASN 75 1 AC1 15 B SER 351 B SER 104 HELX_P B THR 359 B THR 112 1 AC2 9 B ASP 362 B ASP 115 HELX_P B ASN 383 B ASN 136 1 AC3 22 B LYS 391 B LYS 144 HELX_P B ASP 393 B ASP 146 5 AC4 3 B ALA 432 B ALA 185 HELX_P B THR 437 B THR 190 1 AC5 6 B PRO 443 B PRO 196 HELX_P B GLY 460 B GLY 213 1 AC6 18 B ASN 468 B ASN 221 HELX_P B ASN 479 B ASN 232 1 AC7 12 B ASN 486 B ASN 239 HELX_P B LEU 490 B LEU 243 5 AC8 5 B SER 491 B SER 244 HELX_P B LEU 502 B LEU 255 1 AC9 12 B SER 511 B SER 264 HELX_P B LEU 516 B LEU 269 1 AD1 6 B GLN 517 B GLN 270 HELX_P B ALA 524 B ALA 277 5 AD2 8 B PRO 526 B PRO 279 HELX_P B SER 529 B SER 282 5 AD3 4 B LEU 530 B LEU 283 HELX_P B ALA 540 B ALA 293 1 AD4 11 disulf 2.038 A CYS 360 A SG CYS 113 1_555 B CYS 360 B SG CYS 113 1_556 TRANSFERASE/TRANSFERASE INHIBITOR kinase, Inhibitor, Complex, TRANSFERASE-TRANSFERASE INHIBITOR complex A ASP 250 A ASP 3 1 A GLU 251 A GLU 4 0.24 A SER 281 A SER 34 1 A GLY 282 A GLY 35 -2.62 A GLN 306 A GLN 59 1 A PRO 307 A PRO 60 -4.02 PAK1_HUMAN UNP 1 249 Q13153 SDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIV NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDF GFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPE KLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKNNH 249 545 4ZY4 249 545 Q13153 A 1 2 298 249 545 4ZY4 249 545 Q13153 B 1 2 298 1 expression tag GLY 248 4ZY4 A Q13153 UNP 1 1 ASP engineered mutation ASN 389 4ZY4 A Q13153 UNP 389 142 1 expression tag GLY 546 4ZY4 A Q13153 UNP 299 1 expression tag ASN 547 4ZY4 A Q13153 UNP 300 1 expression tag SER 548 4ZY4 A Q13153 UNP 301 2 expression tag GLY 248 4ZY4 B Q13153 UNP 1 2 ASP engineered mutation ASN 389 4ZY4 B Q13153 UNP 389 142 2 expression tag GLY 546 4ZY4 B Q13153 UNP 299 2 expression tag ASN 547 4ZY4 B Q13153 UNP 300 2 expression tag SER 548 4ZY4 B Q13153 UNP 301 5 3 2 5 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A TYR 270 A TYR 23 A GLN 278 A GLN 31 A THR 283 A THR 36 A ASP 289 A ASP 42 A GLU 295 A GLU 48 A LYS 299 A LYS 52 A TRP 341 A TRP 94 A GLU 345 A GLU 98 A TYR 330 A TYR 83 A TYR 334 A TYR 87 A GLY 350 A GLY 103 A SER 351 A SER 104 A ILE 395 A ILE 148 A LEU 397 A LEU 150 A VAL 403 A VAL 156 A LEU 405 A LEU 158 A VAL 385 A VAL 138 A ILE 386 A ILE 139 A ALA 412 A ALA 165 A GLN 413 A GLN 166 B TYR 270 B TYR 23 B GLN 278 B GLN 31 B THR 283 B THR 36 B ASP 289 B ASP 42 B GLU 295 B GLU 48 B ASN 302 B ASN 55 B GLU 339 B GLU 92 B GLU 345 B GLU 98 B TYR 330 B TYR 83 B LEU 335 B LEU 88 B ILE 395 B ILE 148 B LEU 397 B LEU 150 B VAL 403 B VAL 156 B LEU 405 B LEU 158 binding site for residue 4T3 A 601 A 4T3 601 Software 8 binding site for residue SO4 A 602 A SO4 602 Software 3 binding site for residue 4T3 B 601 B 4T3 601 Software 10 binding site for residue DMS B 602 B DMS 602 Software 4 A ALA 297 A ALA 50 8 1_555 A MET 344 A MET 97 8 1_555 A GLU 345 A GLU 98 8 1_555 A TYR 346 A TYR 99 8 1_555 A LEU 347 A LEU 100 8 1_555 A ALA 348 A ALA 101 8 1_555 A ASP 393 A ASP 146 8 1_555 A LEU 396 A LEU 149 8 1_555 A ARG 388 A ARG 141 3 1_555 A ARG 421 A ARG 174 3 1_555 A THR 423 A THR 176 3 1_555 B GLU 345 B GLU 98 10 1_555 B TYR 346 B TYR 99 10 1_555 B LEU 347 B LEU 100 10 1_555 B GLY 350 B GLY 103 10 1_555 B ASP 393 B ASP 146 10 1_555 B ASN 394 B ASN 147 10 1_555 B LEU 396 B LEU 149 10 1_555 B THR 406 B THR 159 10 1_555 B ASP 407 B ASP 160 10 1_555 B HOH 725 H HOH 10 1_555 B VAL 328 B VAL 81 4 1_555 B THR 406 B THR 159 4 1_555 B ASP 407 B ASP 160 4 1_555 B PHE 408 B PHE 161 4 1_555 4 P 1 21 1