0.015051
0.000000
0.000000
0.000000
0.011131
0.000000
0.000000
0.000000
0.009213
0.00000
0.00000
0.00000
Sink, R.
Kotnik, M.
Zega, A.
Barreteau, H.
Gobec, S.
Blanot, D.
Dessen, A.
Contreras-Martel, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
66.440
89.840
108.540
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C3 H2 O4 -2
102.046
MALONATE ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C23 H36 N4 O20 P2
750.494
n
URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
S
P
N
6
N
O
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
C
N
11
R
C
N
12
N
O
N
13
S
C
N
14
N
O
N
15
R
C
N
16
N
O
N
17
R
C
Y
18
N
N
Y
19
N
C
Y
20
N
N
Y
21
N
C
Y
22
N
C
N
23
N
N
Y
24
N
N
Y
25
N
C
Y
26
N
N
Y
27
N
C
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
O
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
C
N
62
N
C
N
63
N
N
N
64
N
C
N
65
N
N
N
66
N
N
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
N
N
84
S
C
N
85
N
C
N
86
N
O
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
R
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
S
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
N
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
S
C
N
152
N
C
N
153
N
O
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
O
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
Y
184
N
C
Y
185
N
N
Y
186
N
C
Y
187
N
C
Y
188
N
N
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
S
C
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
N
N
226
S
C
N
227
N
C
N
228
N
O
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
N
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
N
C
N
277
N
C
N
278
N
S
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
C
N
293
N
C
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
O
N
298
N
O
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
N
C
N
329
N
C
N
330
N
C
N
331
N
O
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
N
346
N
O
N
347
N
O
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
R
C
N
360
N
O
N
361
N
C
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
N
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
N
386
N
O
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
N
410
N
O
N
411
N
O
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
N
N
424
N
C
N
425
N
N
N
426
N
C
N
427
N
C
N
428
N
C
N
429
N
O
N
430
N
O
N
431
R
C
N
432
R
C
N
433
N
O
N
434
S
C
N
435
R
C
N
436
N
O
N
437
N
O
N
438
N
C
N
439
N
O
N
440
R
P
N
441
N
O
N
442
N
O
N
443
N
O
N
444
R
P
N
445
N
O
N
446
N
O
N
447
N
O
N
448
R
C
N
449
R
C
N
450
N
N
N
451
N
C
N
452
N
O
N
453
N
C
N
454
R
C
N
455
N
O
N
456
S
C
N
457
N
O
N
458
R
C
N
459
N
O
N
460
N
C
N
461
N
O
N
462
R
C
N
463
N
C
N
464
N
O
N
465
N
C
N
466
N
N
N
467
S
C
N
468
N
C
N
469
N
O
N
470
N
O
N
471
N
C
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
N
N
509
S
C
N
510
N
C
N
511
N
O
N
512
N
C
N
513
N
C
N
514
N
C
N
515
N
O
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
Y
30
N
sing
Y
31
N
sing
Y
32
N
doub
N
33
N
sing
Y
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
doub
N
39
N
sing
N
40
N
sing
Y
41
N
sing
Y
42
N
doub
N
43
N
sing
Y
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
Y
184
N
sing
Y
185
N
doub
Y
186
N
doub
N
187
N
sing
Y
188
N
sing
N
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
Y
300
N
doub
Y
301
N
sing
Y
302
N
sing
N
303
N
sing
Y
304
N
doub
N
305
N
sing
Y
306
N
doub
N
307
N
sing
Y
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
doub
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
doub
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
doub
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
Y
369
N
doub
Y
370
N
sing
Y
371
N
sing
N
372
N
sing
Y
373
N
doub
Y
374
N
sing
Y
375
N
sing
N
376
N
sing
Y
377
N
sing
Y
378
N
doub
N
379
N
sing
Y
380
N
doub
N
381
N
sing
Y
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
Y
397
N
doub
Y
398
N
sing
Y
399
N
sing
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
doub
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
doub
N
419
N
doub
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
doub
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
doub
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
doub
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
doub
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
doub
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
US
PLoS ONE
1932-6203
11
e0152075
e0152075
10.1371/journal.pone.0152075
27031227
Crystallographic Study of Peptidoglycan Biosynthesis Enzyme MurD: Domain Movement Revisited.
2016
10.2210/pdb5a5f/pdb
pdb_00005a5f
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2008-04-30
ADSC CCD
SINGLE WAVELENGTH
M
x-ray
1
0.97623
1.0
ID29
ESRF
0.97623
SYNCHROTRON
ESRF BEAMLINE ID29
46976.332
UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
6.3.2.9
1
man
polymer
750.494
URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE
1
syn
non-polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
102.046
MALONATE ION
2
syn
non-polymer
18.015
water
269
nat
water
D-GLUTAMIC ACID-ADDING ENZYME, UDP-N-ACETYLMURAMOYL-L-ALANY L-D-GLUTAMATE SYNTHETASE, MURD LIGASE
no
no
ADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPS
LSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSS
FQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLN
HQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKA
TNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPR
VQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELGS
ADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPS
LSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSS
FQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLN
HQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKA
TNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPR
VQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELGS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
83333
Escherichia coli K-12
668369
Escherichia coli DH5[alpha]
1
3.37
63.55
NONE
7.4
4 MG/ML PROTEIN, 1 MM UMA, 5 MM AMP-PNP, 1 MM NAN3, 1 MM DTT, 20 MM HEPES, PH 7.4, 1.8 M NA-MALONATE
citation
entity_src_gen
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_site
repository
Initial release
Database references
Source and taxonomy
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2016-04-13
1
1
2018-02-28
1
2
2024-01-10
_citation.journal_abbrev
_citation.page_first
_citation.page_last
_citation.pdbx_database_id_DOI
_citation.title
_entity_src_gen.gene_src_strain
_entity_src_gen.pdbx_gene_src_scientific_name
_entity_src_gen.pdbx_host_org_scientific_name
_entity_src_gen.pdbx_host_org_strain
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
CRYSTAL STRUCTURE OF MURD LIGASE FROM ESCHERICHIA COLI
PDBE
Y
PDBE
2015-06-17
REL
REL
UMA
URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE
ADP
ADENOSINE-5'-DIPHOSPHATE
MLI
MALONATE ION
HOH
water
3UAG
PDB ENTRY 3UAG
PDB
experimental model
UMA
450
2
UMA
UMA
450
A
ADP
451
3
ADP
ADP
451
A
MLI
500
4
MLI
MLI
500
A
MLI
501
4
MLI
MLI
501
A
HOH
2001
5
HOH
HOH
2001
A
HOH
2002
5
HOH
HOH
2002
A
HOH
2003
5
HOH
HOH
2003
A
HOH
2004
5
HOH
HOH
2004
A
HOH
2005
5
HOH
HOH
2005
A
HOH
2006
5
HOH
HOH
2006
A
HOH
2007
5
HOH
HOH
2007
A
HOH
2008
5
HOH
HOH
2008
A
HOH
2009
5
HOH
HOH
2009
A
HOH
2010
5
HOH
HOH
2010
A
HOH
2011
5
HOH
HOH
2011
A
HOH
2012
5
HOH
HOH
2012
A
HOH
2013
5
HOH
HOH
2013
A
HOH
2014
5
HOH
HOH
2014
A
HOH
2015
5
HOH
HOH
2015
A
HOH
2016
5
HOH
HOH
2016
A
HOH
2017
5
HOH
HOH
2017
A
HOH
2018
5
HOH
HOH
2018
A
HOH
2019
5
HOH
HOH
2019
A
HOH
2020
5
HOH
HOH
2020
A
HOH
2021
5
HOH
HOH
2021
A
HOH
2022
5
HOH
HOH
2022
A
HOH
2023
5
HOH
HOH
2023
A
HOH
2024
5
HOH
HOH
2024
A
HOH
2025
5
HOH
HOH
2025
A
HOH
2026
5
HOH
HOH
2026
A
HOH
2027
5
HOH
HOH
2027
A
HOH
2028
5
HOH
HOH
2028
A
HOH
2029
5
HOH
HOH
2029
A
HOH
2030
5
HOH
HOH
2030
A
HOH
2031
5
HOH
HOH
2031
A
HOH
2032
5
HOH
HOH
2032
A
HOH
2033
5
HOH
HOH
2033
A
HOH
2034
5
HOH
HOH
2034
A
HOH
2035
5
HOH
HOH
2035
A
HOH
2036
5
HOH
HOH
2036
A
HOH
2037
5
HOH
HOH
2037
A
HOH
2038
5
HOH
HOH
2038
A
HOH
2039
5
HOH
HOH
2039
A
HOH
2040
5
HOH
HOH
2040
A
HOH
2041
5
HOH
HOH
2041
A
HOH
2042
5
HOH
HOH
2042
A
HOH
2043
5
HOH
HOH
2043
A
HOH
2044
5
HOH
HOH
2044
A
HOH
2045
5
HOH
HOH
2045
A
HOH
2046
5
HOH
HOH
2046
A
HOH
2047
5
HOH
HOH
2047
A
HOH
2048
5
HOH
HOH
2048
A
HOH
2049
5
HOH
HOH
2049
A
HOH
2050
5
HOH
HOH
2050
A
HOH
2051
5
HOH
HOH
2051
A
HOH
2052
5
HOH
HOH
2052
A
HOH
2053
5
HOH
HOH
2053
A
HOH
2054
5
HOH
HOH
2054
A
HOH
2055
5
HOH
HOH
2055
A
HOH
2056
5
HOH
HOH
2056
A
HOH
2057
5
HOH
HOH
2057
A
HOH
2058
5
HOH
HOH
2058
A
HOH
2059
5
HOH
HOH
2059
A
HOH
2060
5
HOH
HOH
2060
A
HOH
2061
5
HOH
HOH
2061
A
HOH
2062
5
HOH
HOH
2062
A
HOH
2063
5
HOH
HOH
2063
A
HOH
2064
5
HOH
HOH
2064
A
HOH
2065
5
HOH
HOH
2065
A
HOH
2066
5
HOH
HOH
2066
A
HOH
2067
5
HOH
HOH
2067
A
HOH
2068
5
HOH
HOH
2068
A
HOH
2069
5
HOH
HOH
2069
A
HOH
2070
5
HOH
HOH
2070
A
HOH
2071
5
HOH
HOH
2071
A
HOH
2072
5
HOH
HOH
2072
A
HOH
2073
5
HOH
HOH
2073
A
HOH
2074
5
HOH
HOH
2074
A
HOH
2075
5
HOH
HOH
2075
A
HOH
2076
5
HOH
HOH
2076
A
HOH
2077
5
HOH
HOH
2077
A
HOH
2078
5
HOH
HOH
2078
A
HOH
2079
5
HOH
HOH
2079
A
HOH
2080
5
HOH
HOH
2080
A
HOH
2081
5
HOH
HOH
2081
A
HOH
2082
5
HOH
HOH
2082
A
HOH
2083
5
HOH
HOH
2083
A
HOH
2084
5
HOH
HOH
2084
A
HOH
2085
5
HOH
HOH
2085
A
HOH
2086
5
HOH
HOH
2086
A
HOH
2087
5
HOH
HOH
2087
A
HOH
2088
5
HOH
HOH
2088
A
HOH
2089
5
HOH
HOH
2089
A
HOH
2090
5
HOH
HOH
2090
A
HOH
2091
5
HOH
HOH
2091
A
HOH
2092
5
HOH
HOH
2092
A
HOH
2093
5
HOH
HOH
2093
A
HOH
2094
5
HOH
HOH
2094
A
HOH
2095
5
HOH
HOH
2095
A
HOH
2096
5
HOH
HOH
2096
A
HOH
2097
5
HOH
HOH
2097
A
HOH
2098
5
HOH
HOH
2098
A
HOH
2099
5
HOH
HOH
2099
A
HOH
2100
5
HOH
HOH
2100
A
HOH
2101
5
HOH
HOH
2101
A
HOH
2102
5
HOH
HOH
2102
A
HOH
2103
5
HOH
HOH
2103
A
HOH
2104
5
HOH
HOH
2104
A
HOH
2105
5
HOH
HOH
2105
A
HOH
2106
5
HOH
HOH
2106
A
HOH
2107
5
HOH
HOH
2107
A
HOH
2108
5
HOH
HOH
2108
A
HOH
2109
5
HOH
HOH
2109
A
HOH
2110
5
HOH
HOH
2110
A
HOH
2111
5
HOH
HOH
2111
A
HOH
2112
5
HOH
HOH
2112
A
HOH
2113
5
HOH
HOH
2113
A
HOH
2114
5
HOH
HOH
2114
A
HOH
2115
5
HOH
HOH
2115
A
HOH
2116
5
HOH
HOH
2116
A
HOH
2117
5
HOH
HOH
2117
A
HOH
2118
5
HOH
HOH
2118
A
HOH
2119
5
HOH
HOH
2119
A
HOH
2120
5
HOH
HOH
2120
A
HOH
2121
5
HOH
HOH
2121
A
HOH
2122
5
HOH
HOH
2122
A
HOH
2123
5
HOH
HOH
2123
A
HOH
2124
5
HOH
HOH
2124
A
HOH
2125
5
HOH
HOH
2125
A
HOH
2126
5
HOH
HOH
2126
A
HOH
2127
5
HOH
HOH
2127
A
HOH
2128
5
HOH
HOH
2128
A
HOH
2129
5
HOH
HOH
2129
A
HOH
2130
5
HOH
HOH
2130
A
HOH
2131
5
HOH
HOH
2131
A
HOH
2132
5
HOH
HOH
2132
A
HOH
2133
5
HOH
HOH
2133
A
HOH
2134
5
HOH
HOH
2134
A
HOH
2135
5
HOH
HOH
2135
A
HOH
2136
5
HOH
HOH
2136
A
HOH
2137
5
HOH
HOH
2137
A
HOH
2138
5
HOH
HOH
2138
A
HOH
2139
5
HOH
HOH
2139
A
HOH
2140
5
HOH
HOH
2140
A
HOH
2141
5
HOH
HOH
2141
A
HOH
2142
5
HOH
HOH
2142
A
HOH
2143
5
HOH
HOH
2143
A
HOH
2144
5
HOH
HOH
2144
A
HOH
2145
5
HOH
HOH
2145
A
HOH
2146
5
HOH
HOH
2146
A
HOH
2147
5
HOH
HOH
2147
A
HOH
2148
5
HOH
HOH
2148
A
HOH
2149
5
HOH
HOH
2149
A
HOH
2150
5
HOH
HOH
2150
A
HOH
2151
5
HOH
HOH
2151
A
HOH
2152
5
HOH
HOH
2152
A
HOH
2153
5
HOH
HOH
2153
A
HOH
2154
5
HOH
HOH
2154
A
HOH
2155
5
HOH
HOH
2155
A
HOH
2156
5
HOH
HOH
2156
A
HOH
2157
5
HOH
HOH
2157
A
HOH
2158
5
HOH
HOH
2158
A
HOH
2159
5
HOH
HOH
2159
A
HOH
2160
5
HOH
HOH
2160
A
HOH
2161
5
HOH
HOH
2161
A
HOH
2162
5
HOH
HOH
2162
A
HOH
2163
5
HOH
HOH
2163
A
HOH
2164
5
HOH
HOH
2164
A
HOH
2165
5
HOH
HOH
2165
A
HOH
2166
5
HOH
HOH
2166
A
HOH
2167
5
HOH
HOH
2167
A
HOH
2168
5
HOH
HOH
2168
A
HOH
2169
5
HOH
HOH
2169
A
HOH
2170
5
HOH
HOH
2170
A
HOH
2171
5
HOH
HOH
2171
A
HOH
2172
5
HOH
HOH
2172
A
HOH
2173
5
HOH
HOH
2173
A
HOH
2174
5
HOH
HOH
2174
A
HOH
2175
5
HOH
HOH
2175
A
HOH
2176
5
HOH
HOH
2176
A
HOH
2177
5
HOH
HOH
2177
A
HOH
2178
5
HOH
HOH
2178
A
HOH
2179
5
HOH
HOH
2179
A
HOH
2180
5
HOH
HOH
2180
A
HOH
2181
5
HOH
HOH
2181
A
HOH
2182
5
HOH
HOH
2182
A
HOH
2183
5
HOH
HOH
2183
A
HOH
2184
5
HOH
HOH
2184
A
HOH
2185
5
HOH
HOH
2185
A
HOH
2186
5
HOH
HOH
2186
A
HOH
2187
5
HOH
HOH
2187
A
HOH
2188
5
HOH
HOH
2188
A
HOH
2189
5
HOH
HOH
2189
A
HOH
2190
5
HOH
HOH
2190
A
HOH
2191
5
HOH
HOH
2191
A
HOH
2192
5
HOH
HOH
2192
A
HOH
2193
5
HOH
HOH
2193
A
HOH
2194
5
HOH
HOH
2194
A
HOH
2195
5
HOH
HOH
2195
A
HOH
2196
5
HOH
HOH
2196
A
HOH
2197
5
HOH
HOH
2197
A
HOH
2198
5
HOH
HOH
2198
A
HOH
2199
5
HOH
HOH
2199
A
HOH
2200
5
HOH
HOH
2200
A
HOH
2201
5
HOH
HOH
2201
A
HOH
2202
5
HOH
HOH
2202
A
HOH
2203
5
HOH
HOH
2203
A
HOH
2204
5
HOH
HOH
2204
A
HOH
2205
5
HOH
HOH
2205
A
HOH
2206
5
HOH
HOH
2206
A
HOH
2207
5
HOH
HOH
2207
A
HOH
2208
5
HOH
HOH
2208
A
HOH
2209
5
HOH
HOH
2209
A
HOH
2210
5
HOH
HOH
2210
A
HOH
2211
5
HOH
HOH
2211
A
HOH
2212
5
HOH
HOH
2212
A
HOH
2213
5
HOH
HOH
2213
A
HOH
2214
5
HOH
HOH
2214
A
HOH
2215
5
HOH
HOH
2215
A
HOH
2216
5
HOH
HOH
2216
A
HOH
2217
5
HOH
HOH
2217
A
HOH
2218
5
HOH
HOH
2218
A
HOH
2219
5
HOH
HOH
2219
A
HOH
2220
5
HOH
HOH
2220
A
HOH
2221
5
HOH
HOH
2221
A
HOH
2222
5
HOH
HOH
2222
A
HOH
2223
5
HOH
HOH
2223
A
HOH
2224
5
HOH
HOH
2224
A
HOH
2225
5
HOH
HOH
2225
A
HOH
2226
5
HOH
HOH
2226
A
HOH
2227
5
HOH
HOH
2227
A
HOH
2228
5
HOH
HOH
2228
A
HOH
2229
5
HOH
HOH
2229
A
HOH
2230
5
HOH
HOH
2230
A
HOH
2231
5
HOH
HOH
2231
A
HOH
2232
5
HOH
HOH
2232
A
HOH
2233
5
HOH
HOH
2233
A
HOH
2234
5
HOH
HOH
2234
A
HOH
2235
5
HOH
HOH
2235
A
HOH
2236
5
HOH
HOH
2236
A
HOH
2237
5
HOH
HOH
2237
A
HOH
2238
5
HOH
HOH
2238
A
HOH
2239
5
HOH
HOH
2239
A
HOH
2240
5
HOH
HOH
2240
A
HOH
2241
5
HOH
HOH
2241
A
HOH
2242
5
HOH
HOH
2242
A
HOH
2243
5
HOH
HOH
2243
A
HOH
2244
5
HOH
HOH
2244
A
HOH
2245
5
HOH
HOH
2245
A
HOH
2246
5
HOH
HOH
2246
A
HOH
2247
5
HOH
HOH
2247
A
HOH
2248
5
HOH
HOH
2248
A
HOH
2249
5
HOH
HOH
2249
A
HOH
2250
5
HOH
HOH
2250
A
HOH
2251
5
HOH
HOH
2251
A
HOH
2252
5
HOH
HOH
2252
A
HOH
2253
5
HOH
HOH
2253
A
HOH
2254
5
HOH
HOH
2254
A
HOH
2255
5
HOH
HOH
2255
A
HOH
2256
5
HOH
HOH
2256
A
HOH
2257
5
HOH
HOH
2257
A
HOH
2258
5
HOH
HOH
2258
A
HOH
2259
5
HOH
HOH
2259
A
HOH
2260
5
HOH
HOH
2260
A
HOH
2261
5
HOH
HOH
2261
A
HOH
2262
5
HOH
HOH
2262
A
HOH
2263
5
HOH
HOH
2263
A
HOH
2264
5
HOH
HOH
2264
A
HOH
2265
5
HOH
HOH
2265
A
HOH
2266
5
HOH
HOH
2266
A
HOH
2267
5
HOH
HOH
2267
A
HOH
2268
5
HOH
HOH
2268
A
HOH
2269
5
HOH
HOH
2269
A
ALA
1
n
1
ALA
1
A
ASP
2
n
2
ASP
2
A
TYR
3
n
3
TYR
3
A
GLN
4
n
4
GLN
4
A
GLY
5
n
5
GLY
5
A
LYS
6
n
6
LYS
6
A
ASN
7
n
7
ASN
7
A
VAL
8
n
8
VAL
8
A
VAL
9
n
9
VAL
9
A
ILE
10
n
10
ILE
10
A
ILE
11
n
11
ILE
11
A
GLY
12
n
12
GLY
12
A
LEU
13
n
13
LEU
13
A
GLY
14
n
14
GLY
14
A
LEU
15
n
15
LEU
15
A
THR
16
n
16
THR
16
A
GLY
17
n
17
GLY
17
A
LEU
18
n
18
LEU
18
A
SER
19
n
19
SER
19
A
CYS
20
n
20
CYS
20
A
VAL
21
n
21
VAL
21
A
ASP
22
n
22
ASP
22
A
PHE
23
n
23
PHE
23
A
PHE
24
n
24
PHE
24
A
LEU
25
n
25
LEU
25
A
ALA
26
n
26
ALA
26
A
ARG
27
n
27
ARG
27
A
GLY
28
n
28
GLY
28
A
VAL
29
n
29
VAL
29
A
THR
30
n
30
THR
30
A
PRO
31
n
31
PRO
31
A
ARG
32
n
32
ARG
32
A
VAL
33
n
33
VAL
33
A
MET
34
n
34
MET
34
A
ASP
35
n
35
ASP
35
A
THR
36
n
36
THR
36
A
ARG
37
n
37
ARG
37
A
MET
38
n
38
MET
38
A
THR
39
n
39
THR
39
A
PRO
40
n
40
PRO
40
A
PRO
41
n
41
PRO
41
A
GLY
42
n
42
GLY
42
A
LEU
43
n
43
LEU
43
A
ASP
44
n
44
ASP
44
A
LYS
45
n
45
LYS
45
A
LEU
46
n
46
LEU
46
A
PRO
47
n
47
PRO
47
A
GLU
48
n
48
GLU
48
A
ALA
49
n
49
ALA
49
A
VAL
50
n
50
VAL
50
A
GLU
51
n
51
GLU
51
A
ARG
52
n
52
ARG
52
A
HIS
53
n
53
HIS
53
A
THR
54
n
54
THR
54
A
GLY
55
n
55
GLY
55
A
SER
56
n
56
SER
56
A
LEU
57
n
57
LEU
57
A
ASN
58
n
58
ASN
58
A
ASP
59
n
59
ASP
59
A
GLU
60
n
60
GLU
60
A
TRP
61
n
61
TRP
61
A
LEU
62
n
62
LEU
62
A
MET
63
n
63
MET
63
A
ALA
64
n
64
ALA
64
A
ALA
65
n
65
ALA
65
A
ASP
66
n
66
ASP
66
A
LEU
67
n
67
LEU
67
A
ILE
68
n
68
ILE
68
A
VAL
69
n
69
VAL
69
A
ALA
70
n
70
ALA
70
A
SER
71
n
71
SER
71
A
PRO
72
n
72
PRO
72
A
GLY
73
n
73
GLY
73
A
ILE
74
n
74
ILE
74
A
ALA
75
n
75
ALA
75
A
LEU
76
n
76
LEU
76
A
ALA
77
n
77
ALA
77
A
HIS
78
n
78
HIS
78
A
PRO
79
n
79
PRO
79
A
SER
80
n
80
SER
80
A
LEU
81
n
81
LEU
81
A
SER
82
n
82
SER
82
A
ALA
83
n
83
ALA
83
A
ALA
84
n
84
ALA
84
A
ALA
85
n
85
ALA
85
A
ASP
86
n
86
ASP
86
A
ALA
87
n
87
ALA
87
A
GLY
88
n
88
GLY
88
A
ILE
89
n
89
ILE
89
A
GLU
90
n
90
GLU
90
A
ILE
91
n
91
ILE
91
A
VAL
92
n
92
VAL
92
A
GLY
93
n
93
GLY
93
A
ASP
94
n
94
ASP
94
A
ILE
95
n
95
ILE
95
A
GLU
96
n
96
GLU
96
A
LEU
97
n
97
LEU
97
A
PHE
98
n
98
PHE
98
A
CYS
99
n
99
CYS
99
A
ARG
100
n
100
ARG
100
A
GLU
101
n
101
GLU
101
A
ALA
102
n
102
ALA
102
A
GLN
103
n
103
GLN
103
A
ALA
104
n
104
ALA
104
A
PRO
105
n
105
PRO
105
A
ILE
106
n
106
ILE
106
A
VAL
107
n
107
VAL
107
A
ALA
108
n
108
ALA
108
A
ILE
109
n
109
ILE
109
A
THR
110
n
110
THR
110
A
GLY
111
n
111
GLY
111
A
SER
112
n
112
SER
112
A
ASN
113
n
113
ASN
113
A
GLY
114
n
114
GLY
114
A
LYS
115
n
115
LYS
115
A
SER
116
n
116
SER
116
A
THR
117
n
117
THR
117
A
VAL
118
n
118
VAL
118
A
THR
119
n
119
THR
119
A
THR
120
n
120
THR
120
A
LEU
121
n
121
LEU
121
A
VAL
122
n
122
VAL
122
A
GLY
123
n
123
GLY
123
A
GLU
124
n
124
GLU
124
A
MET
125
n
125
MET
125
A
ALA
126
n
126
ALA
126
A
LYS
127
n
127
LYS
127
A
ALA
128
n
128
ALA
128
A
ALA
129
n
129
ALA
129
A
GLY
130
n
130
GLY
130
A
VAL
131
n
131
VAL
131
A
ASN
132
n
132
ASN
132
A
VAL
133
n
133
VAL
133
A
GLY
134
n
134
GLY
134
A
VAL
135
n
135
VAL
135
A
GLY
136
n
136
GLY
136
A
GLY
137
n
137
GLY
137
A
ASN
138
n
138
ASN
138
A
ILE
139
n
139
ILE
139
A
GLY
140
n
140
GLY
140
A
LEU
141
n
141
LEU
141
A
PRO
142
n
142
PRO
142
A
ALA
143
n
143
ALA
143
A
LEU
144
n
144
LEU
144
A
MET
145
n
145
MET
145
A
LEU
146
n
146
LEU
146
A
LEU
147
n
147
LEU
147
A
ASP
148
n
148
ASP
148
A
ASP
149
n
149
ASP
149
A
GLU
150
n
150
GLU
150
A
CYS
151
n
151
CYS
151
A
GLU
152
n
152
GLU
152
A
LEU
153
n
153
LEU
153
A
TYR
154
n
154
TYR
154
A
VAL
155
n
155
VAL
155
A
LEU
156
n
156
LEU
156
A
GLU
157
n
157
GLU
157
A
LEU
158
n
158
LEU
158
A
SER
159
n
159
SER
159
A
SER
160
n
160
SER
160
A
PHE
161
n
161
PHE
161
A
GLN
162
n
162
GLN
162
A
LEU
163
n
163
LEU
163
A
GLU
164
n
164
GLU
164
A
THR
165
n
165
THR
165
A
THR
166
n
166
THR
166
A
SER
167
n
167
SER
167
A
SER
168
n
168
SER
168
A
LEU
169
n
169
LEU
169
A
GLN
170
n
170
GLN
170
A
ALA
171
n
171
ALA
171
A
VAL
172
n
172
VAL
172
A
ALA
173
n
173
ALA
173
A
ALA
174
n
174
ALA
174
A
THR
175
n
175
THR
175
A
ILE
176
n
176
ILE
176
A
LEU
177
n
177
LEU
177
A
ASN
178
n
178
ASN
178
A
VAL
179
n
179
VAL
179
A
THR
180
n
180
THR
180
A
GLU
181
n
181
GLU
181
A
ASP
182
n
182
ASP
182
A
HIS
183
n
183
HIS
183
A
MET
184
n
184
MET
184
A
ASP
185
n
185
ASP
185
A
ARG
186
n
186
ARG
186
A
TYR
187
n
187
TYR
187
A
PRO
188
n
188
PRO
188
A
PHE
189
n
189
PHE
189
A
GLY
190
n
190
GLY
190
A
LEU
191
n
191
LEU
191
A
GLN
192
n
192
GLN
192
A
GLN
193
n
193
GLN
193
A
TYR
194
n
194
TYR
194
A
ARG
195
n
195
ARG
195
A
ALA
196
n
196
ALA
196
A
ALA
197
n
197
ALA
197
A
LYS
198
n
198
LYS
198
A
LEU
199
n
199
LEU
199
A
ARG
200
n
200
ARG
200
A
ILE
201
n
201
ILE
201
A
TYR
202
n
202
TYR
202
A
GLU
203
n
203
GLU
203
A
ASN
204
n
204
ASN
204
A
ALA
205
n
205
ALA
205
A
LYS
206
n
206
LYS
206
A
VAL
207
n
207
VAL
207
A
CYS
208
n
208
CYS
208
A
VAL
209
n
209
VAL
209
A
VAL
210
n
210
VAL
210
A
ASN
211
n
211
ASN
211
A
ALA
212
n
212
ALA
212
A
ASP
213
n
213
ASP
213
A
ASP
214
n
214
ASP
214
A
ALA
215
n
215
ALA
215
A
LEU
216
n
216
LEU
216
A
THR
217
n
217
THR
217
A
MET
218
n
218
MET
218
A
PRO
219
n
219
PRO
219
A
ILE
220
n
220
ILE
220
A
ARG
221
n
221
ARG
221
A
n
222
222
A
n
223
223
A
n
224
224
A
n
225
225
A
n
226
226
A
CYS
227
n
227
CYS
227
A
VAL
228
n
228
VAL
228
A
SER
229
n
229
SER
229
A
PHE
230
n
230
PHE
230
A
GLY
231
n
231
GLY
231
A
VAL
232
n
232
VAL
232
A
ASN
233
n
233
ASN
233
A
MET
234
n
234
MET
234
A
GLY
235
n
235
GLY
235
A
ASP
236
n
236
ASP
236
A
TYR
237
n
237
TYR
237
A
HIS
238
n
238
HIS
238
A
LEU
239
n
239
LEU
239
A
ASN
240
n
240
ASN
240
A
HIS
241
n
241
HIS
241
A
GLN
242
n
242
GLN
242
A
GLN
243
n
243
GLN
243
A
GLY
244
n
244
GLY
244
A
GLU
245
n
245
GLU
245
A
THR
246
n
246
THR
246
A
TRP
247
n
247
TRP
247
A
LEU
248
n
248
LEU
248
A
ARG
249
n
249
ARG
249
A
VAL
250
n
250
VAL
250
A
LYS
251
n
251
LYS
251
A
GLY
252
n
252
GLY
252
A
GLU
253
n
253
GLU
253
A
LYS
254
n
254
LYS
254
A
VAL
255
n
255
VAL
255
A
LEU
256
n
256
LEU
256
A
ASN
257
n
257
ASN
257
A
VAL
258
n
258
VAL
258
A
LYS
259
n
259
LYS
259
A
GLU
260
n
260
GLU
260
A
MET
261
n
261
MET
261
A
LYS
262
n
262
LYS
262
A
LEU
263
n
263
LEU
263
A
SER
264
n
264
SER
264
A
GLY
265
n
265
GLY
265
A
GLN
266
n
266
GLN
266
A
HIS
267
n
267
HIS
267
A
ASN
268
n
268
ASN
268
A
TYR
269
n
269
TYR
269
A
THR
270
n
270
THR
270
A
ASN
271
n
271
ASN
271
A
ALA
272
n
272
ALA
272
A
LEU
273
n
273
LEU
273
A
ALA
274
n
274
ALA
274
A
ALA
275
n
275
ALA
275
A
LEU
276
n
276
LEU
276
A
ALA
277
n
277
ALA
277
A
LEU
278
n
278
LEU
278
A
ALA
279
n
279
ALA
279
A
ASP
280
n
280
ASP
280
A
ALA
281
n
281
ALA
281
A
ALA
282
n
282
ALA
282
A
GLY
283
n
283
GLY
283
A
LEU
284
n
284
LEU
284
A
PRO
285
n
285
PRO
285
A
ARG
286
n
286
ARG
286
A
ALA
287
n
287
ALA
287
A
SER
288
n
288
SER
288
A
SER
289
n
289
SER
289
A
LEU
290
n
290
LEU
290
A
LYS
291
n
291
LYS
291
A
ALA
292
n
292
ALA
292
A
LEU
293
n
293
LEU
293
A
THR
294
n
294
THR
294
A
THR
295
n
295
THR
295
A
PHE
296
n
296
PHE
296
A
THR
297
n
297
THR
297
A
GLY
298
n
298
GLY
298
A
LEU
299
n
299
LEU
299
A
PRO
300
n
300
PRO
300
A
HIS
301
n
301
HIS
301
A
ARG
302
n
302
ARG
302
A
PHE
303
n
303
PHE
303
A
GLU
304
n
304
GLU
304
A
VAL
305
n
305
VAL
305
A
VAL
306
n
306
VAL
306
A
LEU
307
n
307
LEU
307
A
GLU
308
n
308
GLU
308
A
HIS
309
n
309
HIS
309
A
ASN
310
n
310
ASN
310
A
GLY
311
n
311
GLY
311
A
VAL
312
n
312
VAL
312
A
ARG
313
n
313
ARG
313
A
TRP
314
n
314
TRP
314
A
ILE
315
n
315
ILE
315
A
ASN
316
n
316
ASN
316
A
ASP
317
n
317
ASP
317
A
SER
318
n
318
SER
318
A
LYS
319
n
319
LYS
319
A
ALA
320
n
320
ALA
320
A
THR
321
n
321
THR
321
A
ASN
322
n
322
ASN
322
A
VAL
323
n
323
VAL
323
A
GLY
324
n
324
GLY
324
A
SER
325
n
325
SER
325
A
THR
326
n
326
THR
326
A
GLU
327
n
327
GLU
327
A
ALA
328
n
328
ALA
328
A
ALA
329
n
329
ALA
329
A
LEU
330
n
330
LEU
330
A
ASN
331
n
331
ASN
331
A
GLY
332
n
332
GLY
332
A
LEU
333
n
333
LEU
333
A
HIS
334
n
334
HIS
334
A
VAL
335
n
335
VAL
335
A
ASP
336
n
336
ASP
336
A
GLY
337
n
337
GLY
337
A
THR
338
n
338
THR
338
A
LEU
339
n
339
LEU
339
A
HIS
340
n
340
HIS
340
A
LEU
341
n
341
LEU
341
A
LEU
342
n
342
LEU
342
A
LEU
343
n
343
LEU
343
A
GLY
344
n
344
GLY
344
A
GLY
345
n
345
GLY
345
A
ASP
346
n
346
ASP
346
A
GLY
347
n
347
GLY
347
A
LYS
348
n
348
LYS
348
A
SER
349
n
349
SER
349
A
ALA
350
n
350
ALA
350
A
ASP
351
n
351
ASP
351
A
PHE
352
n
352
PHE
352
A
SER
353
n
353
SER
353
A
PRO
354
n
354
PRO
354
A
LEU
355
n
355
LEU
355
A
ALA
356
n
356
ALA
356
A
ARG
357
n
357
ARG
357
A
TYR
358
n
358
TYR
358
A
LEU
359
n
359
LEU
359
A
ASN
360
n
360
ASN
360
A
GLY
361
n
361
GLY
361
A
ASP
362
n
362
ASP
362
A
ASN
363
n
363
ASN
363
A
VAL
364
n
364
VAL
364
A
ARG
365
n
365
ARG
365
A
LEU
366
n
366
LEU
366
A
TYR
367
n
367
TYR
367
A
CYS
368
n
368
CYS
368
A
PHE
369
n
369
PHE
369
A
GLY
370
n
370
GLY
370
A
ARG
371
n
371
ARG
371
A
ASP
372
n
372
ASP
372
A
GLY
373
n
373
GLY
373
A
ALA
374
n
374
ALA
374
A
GLN
375
n
375
GLN
375
A
LEU
376
n
376
LEU
376
A
ALA
377
n
377
ALA
377
A
ALA
378
n
378
ALA
378
A
LEU
379
n
379
LEU
379
A
ARG
380
n
380
ARG
380
A
PRO
381
n
381
PRO
381
A
GLU
382
n
382
GLU
382
A
VAL
383
n
383
VAL
383
A
ALA
384
n
384
ALA
384
A
GLU
385
n
385
GLU
385
A
GLN
386
n
386
GLN
386
A
THR
387
n
387
THR
387
A
GLU
388
n
388
GLU
388
A
THR
389
n
389
THR
389
A
MET
390
n
390
MET
390
A
GLU
391
n
391
GLU
391
A
GLN
392
n
392
GLN
392
A
ALA
393
n
393
ALA
393
A
MET
394
n
394
MET
394
A
ARG
395
n
395
ARG
395
A
LEU
396
n
396
LEU
396
A
LEU
397
n
397
LEU
397
A
ALA
398
n
398
ALA
398
A
PRO
399
n
399
PRO
399
A
ARG
400
n
400
ARG
400
A
VAL
401
n
401
VAL
401
A
GLN
402
n
402
GLN
402
A
PRO
403
n
403
PRO
403
A
GLY
404
n
404
GLY
404
A
ASP
405
n
405
ASP
405
A
MET
406
n
406
MET
406
A
VAL
407
n
407
VAL
407
A
LEU
408
n
408
LEU
408
A
LEU
409
n
409
LEU
409
A
SER
410
n
410
SER
410
A
PRO
411
n
411
PRO
411
A
ALA
412
n
412
ALA
412
A
CYS
413
n
413
CYS
413
A
ALA
414
n
414
ALA
414
A
SER
415
n
415
SER
415
A
LEU
416
n
416
LEU
416
A
ASP
417
n
417
ASP
417
A
GLN
418
n
418
GLN
418
A
PHE
419
n
419
PHE
419
A
LYS
420
n
420
LYS
420
A
ASN
421
n
421
ASN
421
A
PHE
422
n
422
PHE
422
A
GLU
423
n
423
GLU
423
A
GLN
424
n
424
GLN
424
A
ARG
425
n
425
ARG
425
A
GLY
426
n
426
GLY
426
A
ASN
427
n
427
ASN
427
A
GLU
428
n
428
GLU
428
A
PHE
429
n
429
PHE
429
A
ALA
430
n
430
ALA
430
A
ARG
431
n
431
ARG
431
A
LEU
432
n
432
LEU
432
A
ALA
433
n
433
ALA
433
A
LYS
434
n
434
LYS
434
A
GLU
435
n
435
GLU
435
A
LEU
436
n
436
LEU
436
A
GLY
437
n
437
GLY
437
A
SER
438
n
438
SER
438
A
4.3463
0.3906
-1.1674
3.3946
-1.2157
2.4679
0.0678
0.6654
0.2185
-0.4239
0.0447
0.2256
0.0538
-0.3296
-0.1125
0.1224
0.0238
-0.0197
0.2707
0.0822
0.0835
refined
8.3294
75.8096
-22.2046
X-RAY DIFFRACTION
2.0093
0.2220
-0.4416
1.4647
-0.8216
3.4677
-0.0162
0.0614
-0.0693
-0.0149
0.0278
0.1239
0.1157
-0.1351
-0.0116
0.0095
-0.0082
0.0085
0.0094
0.0005
0.0867
refined
1.5161
63.9083
4.4001
X-RAY DIFFRACTION
3.1661
-0.1887
-0.0190
4.0610
1.5912
3.1722
-0.0330
-0.1699
0.1640
0.1141
0.0356
-0.0625
-0.0618
-0.0264
-0.0027
0.1017
-0.0306
0.0040
0.0517
-0.0524
0.0952
refined
7.3997
86.2102
19.9980
X-RAY DIFFRACTION
A
1
A
92
X-RAY DIFFRACTION
1
A
94
A
295
X-RAY DIFFRACTION
2
A
304
A
439
X-RAY DIFFRACTION
3
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
HIS
53
A
N
HIS
53
A
O
VAL
33
A
O
VAL
33
A
N
ARG
32
A
N
ARG
32
A
O
VAL
8
A
O
VAL
8
A
N
VAL
9
A
N
VAL
9
A
O
LEU
67
A
O
LEU
67
A
N
ILE
68
A
N
ILE
68
A
O
GLU
90
A
O
GLU
90
A
N
GLY
134
A
N
GLY
134
A
O
LEU
153
A
O
LEU
153
A
N
LEU
156
A
N
LEU
156
A
O
VAL
107
A
O
VAL
107
A
N
ALA
108
A
N
ALA
108
A
O
ALA
173
A
O
ALA
173
A
N
ALA
174
A
N
ALA
174
A
O
VAL
207
A
O
VAL
207
A
N
VAL
210
A
N
VAL
210
A
O
VAL
228
A
O
VAL
228
A
N
GLN
242
A
N
GLN
242
A
O
GLU
245
A
O
GLU
245
A
N
VAL
250
A
N
VAL
250
A
O
GLU
253
A
O
GLU
253
A
N
HIS
309
A
N
HIS
309
A
O
VAL
312
A
O
VAL
312
A
N
ILE
315
A
N
ILE
315
A
O
VAL
407
A
O
VAL
407
A
N
LEU
408
A
N
LEU
408
A
O
HIS
340
A
O
HIS
340
A
N
LEU
341
A
N
LEU
341
A
O
ARG
365
A
O
ARG
365
A
N
CYS
368
A
N
CYS
368
A
O
GLU
385
A
O
GLU
385
1
A
GLY
222
A
GLY
222
1
Y
1
A
ALA
223
A
ALA
223
1
Y
1
A
ASP
224
A
ASP
224
1
Y
1
A
GLU
225
A
GLU
225
1
Y
1
A
ARG
226
A
ARG
226
1
Y
1
-14.41
2.30
115.30
100.89
A
A
A
CA
CB
CG
LEU
LEU
LEU
376
376
376
N
1
A
LEU
13
-117.26
53.23
1
A
GLU
181
-49.03
108.14
1
A
LEU
256
-174.93
138.75
1
A
PHE
303
33.23
58.08
1
A
ARG
380
-164.54
81.26
35.207
-1.26
0.00
0.00
0.47
0.00
0.79
0.960
0.944
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.23227
0.19809
0.19982
1.90
46.47
2561
48594
5.0
98.57
6.549
0.100
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.126
0.124
0.80
0.80
1.20
PDB ENTRY 3UAG
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
1.90
46.47
269
3613
90
0
3254
0.011
0.019
3439
1.492
2.001
4686
7.027
5.000
444
37.133
24.545
143
13.906
15.000
560
16.115
15.000
21
0.121
0.200
545
0.009
0.021
2576
1.970
1.833
1744
2.622
2.734
2179
3.087
2.147
1695
0.463
0.411
1.949
174
3479
20
97.21
37.009
1.90
46.46
5A5F
51890
3.0
0.06
1
23.75
5.4
98.2
0.62
1.90
2.01
3.22
1
5.5
94.8
refinement
REFMAC
5.7.0032
data reduction
XDS
data scaling
XSCALE
phasing
PHASER
CRYSTAL STRUCTURE OF MURD LIGASE FROM ESCHERICHIA COLI IN COMPLEX WITH UMA AND ADP
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
A
GLY
14
A
GLY
14
HELX_P
A
ARG
27
A
ARG
27
1
1
14
A
GLY
42
A
GLY
42
HELX_P
A
LEU
46
A
LEU
46
5
2
5
A
ASN
58
A
ASN
58
HELX_P
A
ALA
65
A
ALA
65
1
3
8
A
HIS
78
A
HIS
78
HELX_P
A
ALA
87
A
ALA
87
1
4
10
A
GLY
93
A
GLY
93
HELX_P
A
ALA
102
A
ALA
102
1
5
10
A
GLY
114
A
GLY
114
HELX_P
A
ALA
129
A
ALA
129
1
6
16
A
PRO
142
A
PRO
142
HELX_P
A
LEU
147
A
LEU
147
5
7
6
A
SER
159
A
SER
159
HELX_P
A
THR
165
A
THR
165
1
8
7
A
HIS
183
A
HIS
183
HELX_P
A
TYR
187
A
TYR
187
5
9
5
A
GLY
190
A
GLY
190
HELX_P
A
ARG
200
A
ARG
200
1
10
11
A
ILE
201
A
ILE
201
HELX_P
A
GLU
203
A
GLU
203
5
11
3
A
ASP
214
A
ASP
214
HELX_P
A
MET
218
A
MET
218
5
12
5
A
LYS
259
A
LYS
259
HELX_P
A
MET
261
A
MET
261
5
13
3
A
GLY
265
A
GLY
265
HELX_P
A
ALA
282
A
ALA
282
1
14
18
A
PRO
285
A
PRO
285
HELX_P
A
PHE
296
A
PHE
296
1
15
12
A
ASN
322
A
ASN
322
HELX_P
A
GLY
332
A
GLY
332
1
16
11
A
PHE
352
A
PHE
352
HELX_P
A
LEU
359
A
LEU
359
5
17
8
A
ASP
372
A
ASP
372
HELX_P
A
ALA
378
A
ALA
378
1
18
7
A
LEU
379
A
LEU
379
HELX_P
A
GLU
382
A
GLU
382
5
19
4
A
THR
389
A
THR
389
HELX_P
A
ALA
398
A
ALA
398
1
20
10
A
PRO
399
A
PRO
399
HELX_P
A
VAL
401
A
VAL
401
5
21
3
A
ASN
421
A
ASN
421
HELX_P
A
SER
438
A
SER
438
1
22
18
disulf
2.048
B
B
A
CYS
208
A
SG
CYS
208
1_555
A
CYS
227
A
SG
CYS
227
1_555
LIGASE
LIGASE, PEPTIDOGLYCAN SYNTHESIS, ADP-FORMING ENZYME, CELL WALL, CELL SHAPE, CELL CYCLE, NUCLEOTIDE-BINDING, ATP- BINDING, CELL DIVISION, LIGAND, CONFORMATION
MURD_ECOLI
UNP
1
P14900
2
438
5A5F
1
437
P14900
A
1
1
437
1
expression tag
SER
438
5A5F
A
P14900
UNP
438
5
6
3
6
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
A
ARG
52
A
ARG
52
A
THR
54
A
THR
54
A
ARG
32
A
ARG
32
A
ASP
35
A
ASP
35
A
VAL
8
A
VAL
8
A
ILE
11
A
ILE
11
A
LEU
67
A
LEU
67
A
ALA
70
A
ALA
70
A
GLU
90
A
GLU
90
A
VAL
92
A
VAL
92
A
VAL
133
A
VAL
133
A
GLY
137
A
GLY
137
A
LEU
153
A
LEU
153
A
GLU
157
A
GLU
157
A
ILE
106
A
ILE
106
A
THR
110
A
THR
110
A
ALA
173
A
ALA
173
A
ILE
176
A
ILE
176
A
VAL
207
A
VAL
207
A
ASN
211
A
ASN
211
A
VAL
228
A
VAL
228
A
PHE
230
A
PHE
230
A
TYR
237
A
TYR
237
A
GLN
242
A
GLN
242
A
GLU
245
A
GLU
245
A
VAL
250
A
VAL
250
A
GLU
253
A
GLU
253
A
ASN
257
A
ASN
257
A
GLU
304
A
GLU
304
A
HIS
309
A
HIS
309
A
VAL
312
A
VAL
312
A
ASN
316
A
ASN
316
A
MET
406
A
MET
406
A
LEU
409
A
LEU
409
A
LEU
339
A
LEU
339
A
GLY
344
A
GLY
344
A
VAL
364
A
VAL
364
A
PHE
369
A
PHE
369
A
ALA
384
A
ALA
384
A
GLN
386
A
GLN
386
BINDING SITE FOR RESIDUE UMA A 450
A
UMA
450
Software
24
BINDING SITE FOR RESIDUE ADP A 451
A
ADP
451
Software
22
BINDING SITE FOR RESIDUE MLI A 500
A
MLI
500
Software
6
BINDING SITE FOR RESIDUE MLI A 501
A
MLI
501
Software
5
A
GLY
14
A
GLY
14
24
1_555
A
LEU
15
A
LEU
15
24
1_555
A
THR
16
A
THR
16
24
1_555
A
ASP
35
A
ASP
35
24
1_555
A
THR
36
A
THR
36
24
1_555
A
ARG
37
A
ARG
37
24
1_555
A
SER
71
A
SER
71
24
1_555
A
PRO
72
A
PRO
72
24
1_555
A
GLY
73
A
GLY
73
24
1_555
A
GLY
137
A
GLY
137
24
1_555
A
ASN
138
A
ASN
138
24
1_555
A
GLY
140
A
GLY
140
24
1_555
A
SER
159
A
SER
159
24
1_555
A
GLN
162
A
GLN
162
24
1_555
A
HIS
183
A
HIS
183
24
1_555
A
HOH
2009
F
HOH
24
1_555
A
HOH
2010
F
HOH
24
1_555
A
HOH
2012
F
HOH
24
1_555
A
HOH
2059
F
HOH
24
1_555
A
HOH
2071
F
HOH
24
1_555
A
HOH
2095
F
HOH
24
1_555
A
HOH
2265
F
HOH
24
1_555
A
HOH
2266
F
HOH
24
1_555
A
HOH
2267
F
HOH
24
1_555
A
ASN
113
A
ASN
113
22
1_555
A
GLY
114
A
GLY
114
22
1_555
A
LYS
115
A
LYS
115
22
1_555
A
SER
116
A
SER
116
22
1_555
A
THR
117
A
THR
117
22
1_555
A
ASN
178
A
ASN
178
22
1_555
A
HIS
267
A
HIS
267
22
1_555
A
ASN
271
A
ASN
271
22
1_555
A
ARG
302
A
ARG
302
22
1_555
A
PHE
303
A
PHE
303
22
1_555
A
ASP
317
A
ASP
317
22
1_555
A
LYS
319
A
LYS
319
22
1_555
A
ALA
320
A
ALA
320
22
1_555
A
SER
325
A
SER
325
22
1_555
A
ALA
328
A
ALA
328
22
1_555
A
HOH
2068
F
HOH
22
1_555
A
HOH
2071
F
HOH
22
1_555
A
HOH
2072
F
HOH
22
1_555
A
HOH
2074
F
HOH
22
1_555
A
HOH
2119
F
HOH
22
1_555
A
HOH
2184
F
HOH
22
1_555
A
HOH
2268
F
HOH
22
1_555
A
THR
321
A
THR
321
6
1_555
A
ALA
414
A
ALA
414
6
1_555
A
SER
415
A
SER
415
6
1_555
A
ASN
421
A
ASN
421
6
1_555
A
PHE
422
A
PHE
422
6
1_555
A
HOH
2212
F
HOH
6
1_555
A
HIS
241
A
HIS
241
5
1_555
A
THR
246
A
THR
246
5
1_555
A
HIS
334
A
HIS
334
5
1_555
A
HOH
2181
F
HOH
5
1_555
A
HOH
2269
F
HOH
5
1_555
19
P 21 21 21