0.014210
0.000000
0.002641
0.000000
0.013986
0.000000
0.000000
0.000000
0.014003
0.00000
0.00000
0.00000
Ruehmann, E.
Heine, A.
Klebe, G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
100.53
90.00
70.373
71.500
72.636
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O S
78.133
DIMETHYL SULFOXIDE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C9 H11 N O6 S
261.252
n
O-SULFO-L-TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
C7 H6 Cl N O
155.582
3-CHLORO-BENZAMIDE
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
S
N
89
N
O
N
90
N
C
N
91
N
C
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
S
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
N
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
C
N
148
N
O
N
149
N
C
N
150
N
O
N
151
N
C
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
N
C
Y
166
N
C
Y
167
N
N
Y
168
N
C
Y
169
N
C
Y
170
N
N
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
O
N
183
N
H
N
184
N
H
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
S
C
N
190
N
C
N
191
N
C
N
192
N
C
N
193
N
O
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
N
N
208
S
C
N
209
N
C
N
210
N
O
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
C
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
N
N
230
S
C
N
231
N
C
N
232
N
O
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
N
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
N
N
255
S
C
N
256
N
C
N
257
N
O
N
258
N
C
N
259
N
C
N
260
N
S
N
261
N
C
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
NA
N
275
R
C
N
276
R
C
N
277
R
C
N
278
S
C
N
279
R
C
N
280
N
C
N
281
N
C
N
282
N
C
N
283
N
N
N
284
N
O
N
285
N
O
N
286
N
O
N
287
N
O
N
288
N
O
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
P
N
329
N
O
N
330
N
O
N
331
N
O
N
332
N
O
N
333
N
N
N
334
S
C
N
335
N
C
N
336
N
O
N
337
N
C
N
338
N
C
N
339
N
C
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
N
N
351
S
C
N
352
N
C
N
353
N
O
N
354
N
C
N
355
N
O
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
N
N
365
S
C
N
366
N
C
N
367
N
O
N
368
R
C
N
369
N
O
N
370
N
C
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
N
Y
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
N
395
N
O
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
N
N
409
S
C
N
410
N
C
N
411
N
O
N
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
Y
418
N
C
N
419
N
O
N
420
N
O
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
N
N
433
S
C
N
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
Y
440
N
C
N
441
N
O
N
442
N
S
N
443
N
O
N
444
N
O
N
445
N
O
N
446
N
C
N
447
N
O
N
448
N
O
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
N
N
461
S
C
N
462
N
C
N
463
N
O
N
464
N
C
N
465
N
C
N
466
N
C
N
467
N
O
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
Y
479
N
C
N
480
N
CL
Y
481
N
C
Y
482
N
C
Y
483
N
C
Y
484
N
C
Y
485
N
C
N
486
N
C
N
487
N
N
N
488
N
O
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
Y
162
N
sing
Y
163
N
doub
Y
164
N
doub
N
165
N
sing
Y
166
N
sing
N
167
N
sing
Y
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
doub
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
Y
300
N
doub
Y
301
N
sing
Y
302
N
sing
N
303
N
sing
Y
304
N
doub
N
305
N
sing
Y
306
N
doub
N
307
N
sing
Y
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
Y
373
N
doub
Y
374
N
sing
Y
375
N
sing
N
376
N
sing
Y
377
N
doub
Y
378
N
sing
Y
379
N
sing
N
380
N
sing
Y
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
Y
401
N
doub
Y
402
N
sing
Y
403
N
sing
N
404
N
sing
Y
405
N
doub
N
406
N
sing
Y
407
N
doub
N
408
N
sing
Y
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
Y
423
N
doub
Y
424
N
sing
Y
425
N
sing
N
426
N
sing
Y
427
N
doub
N
428
N
sing
Y
429
N
doub
N
430
N
sing
Y
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
doub
N
436
N
doub
N
437
N
sing
N
438
N
sing
N
439
N
doub
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
doub
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
Y
461
N
sing
Y
462
N
doub
Y
463
N
doub
Y
464
N
sing
N
465
N
sing
Y
466
N
doub
Y
467
N
sing
N
468
N
sing
N
469
N
doub
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
58
6960
10.1021/ACS.JMEDCHEM.5B00812
26270568
Fragments Can Bind Either More Enthalpy or Entropy-Driven: Crystal Structures and Residual Hydration Pattern Suggest Why.
2015
10.2210/pdb5afy/pdb
pdb_00005afy
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
113
1
CCD
2013-07-18
MARMOSAIC 225 mm CCD
SINGLE WAVELENGTH
M
x-ray
1
0.91841
1.0
14.2
BESSY
0.91841
SYNCHROTRON
BESSY BEAMLINE 14.2
29651.105
Prothrombin
3.4.21.5
RESIDUES 364-621
1
nat
polymer
HIRUDIN (54-65) (SULFATED)
1548.580
Hirudin-2
1
syn
polymer
3432.829
Prothrombin
3.4.21.5
RESIDUES 333-361
1
nat
polymer
22.990
SODIUM ION
2
syn
non-polymer
155.582
3-CHLORO-BENZAMIDE
1
syn
non-polymer
78.133
DIMETHYL SULFOXIDE
2
syn
non-polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
92.094
GLYCEROL
2
syn
non-polymer
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
non-polymer
18.015
water
326
nat
water
Coagulation factor II
Hirudin II
Coagulation factor II
no
no
IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM
LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL
QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY
THVFRLKKWIQKVIDQFG
IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM
LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL
QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY
THVFRLKKWIQKVIDQFG
H
polypeptide(L)
no
yes
GDFEEIPEE(TYS)LQ
GDFEEIPEEYLQ
I
polypeptide(L)
no
no
EADCGLRPLFEKKSLEDKTERELLESYID
EADCGLRPLFEKKSLEDKTERELLESYID
L
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
PURIFIED FROM HUMAN BLOOD PLASMA
sample
1
258
9606
Homo sapiens
human
PURIFIED FROM HUMAN BLOOD PLASMA
sample
1
29
9606
Homo sapiens
1
2.5
50.71
NONE
7.5
SEE MATERIALS AND METHODS SECTION OF PUBLICATION, pH 7.5
atom_site
pdbx_database_status
struct_conn
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
pdbx_struct_conn_angle
struct_conn
struct_site
struct_site_gen
atom_site
atom_site_anisotrop
chem_comp
database_2
entity
entity_name_com
entity_poly
entity_poly_seq
entity_src_nat
pdbx_entity_nonpoly
pdbx_entity_src_syn
pdbx_nonpoly_scheme
pdbx_poly_seq_scheme
pdbx_struct_assembly_gen
pdbx_struct_conn_angle
pdbx_struct_mod_residue
pdbx_struct_special_symmetry
pdbx_unobs_or_zero_occ_residues
struct_asym
struct_conn
struct_ref
struct_ref_seq
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Database references
Atomic model
Data collection
Derived calculations
Other
Data collection
Derived calculations
Structure summary
Advisory
Atomic model
Data collection
Database references
Derived calculations
Polymer sequence
Source and taxonomy
Structure summary
Data collection
Refinement description
1
0
2015-08-26
1
1
2015-09-23
2
0
2019-10-23
2
1
2020-07-29
3
0
2022-12-07
3
1
2024-01-31
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_pdbx_database_status.status_code_sf
_struct_conn.pdbx_leaving_atom_flag
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.group_PDB
_atom_site.label_alt_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.occupancy
_atom_site.pdbx_PDB_ins_code
_atom_site.type_symbol
_atom_site_anisotrop.U[1][1]
_atom_site_anisotrop.U[1][2]
_atom_site_anisotrop.U[1][3]
_atom_site_anisotrop.U[2][2]
_atom_site_anisotrop.U[2][3]
_atom_site_anisotrop.U[3][3]
_atom_site_anisotrop.id
_atom_site_anisotrop.pdbx_PDB_ins_code
_atom_site_anisotrop.pdbx_auth_asym_id
_atom_site_anisotrop.pdbx_auth_atom_id
_atom_site_anisotrop.pdbx_auth_comp_id
_atom_site_anisotrop.pdbx_auth_seq_id
_atom_site_anisotrop.pdbx_label_alt_id
_atom_site_anisotrop.pdbx_label_asym_id
_atom_site_anisotrop.pdbx_label_atom_id
_atom_site_anisotrop.pdbx_label_comp_id
_atom_site_anisotrop.pdbx_label_seq_id
_atom_site_anisotrop.type_symbol
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly_seq.mon_id
_entity_src_nat.common_name
_entity_src_nat.pdbx_beg_seq_num
_entity_src_nat.pdbx_end_seq_num
_entity_src_nat.pdbx_organism_scientific
_pdbx_entity_src_syn.organism_common_name
_pdbx_entity_src_syn.organism_scientific
_pdbx_entity_src_syn.pdbx_beg_seq_num
_pdbx_entity_src_syn.pdbx_end_seq_num
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.details
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_special_symmetry.label_asym_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref.db_code
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_seq_one_letter_code
_struct_ref_seq.pdbx_db_accession
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
THROMBIN IN COMPLEX WITH 4-METHOXY-N-(2-PYRIDINYL) BENZAMIDE
THROMBIN IN COMPLEX WITH (2R)-2-(BENZYLSULFONYLAMINO)-N -(2-((4-CARBAMIMIDOYLPHENYL)METHYLAMINO)-2-OXO-PROPYL)- 3-PHENYL-PROPANAMIDE
SHEET
DETERMINATION METHOD: DSSP
THE SHEETS PRESENTED AS "HB" IN EACH CHAIN ON SHEET RECORDS
BELOW IS ACTUALLY AN 6-STRANDED BARREL THIS IS REPRESENTED BY
A 7-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS
ARE IDENTICAL.
PDBE
Y
PDBE
2015-01-27
REL
REL
NA
SODIUM ION
WCE
3-CHLORO-BENZAMIDE
DMS
DIMETHYL SULFOXIDE
PO4
PHOSPHATE ION
GOL
GLYCEROL
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
HOH
water
6421
medicinal leech
Hirudo medicinalis
sample
1
12
ASP 14L WAS NOT BUILD DUE TO LACK OF ELECTRON DESITY
RESIDUES 148-149E AND 246 WERE NOT BUILD DUE TO LACK OF
ELECTRON DESITY
4UE7
PDB ENTRY 4UE7
PDB
experimental model
NA
1246
4
NA
NA
1246
H
NA
1247
4
NA
NA
1247
H
WCE
1248
5
WCE
WCE
1248
H
DMS
1249
6
DMS
DMS
1249
H
DMS
1250
6
DMS
DMS
1250
H
PO4
1251
7
PO4
PO4
1251
H
GOL
1252
8
GOL
GOL
1252
H
GOL
1253
8
GOL
GOL
1253
H
NAG
1256
9
NAG
NAG
1256
H
HOH
2001
10
HOH
HOH
2001
H
HOH
2002
10
HOH
HOH
2002
H
HOH
2003
10
HOH
HOH
2003
H
HOH
2004
10
HOH
HOH
2004
H
HOH
2005
10
HOH
HOH
2005
H
HOH
2006
10
HOH
HOH
2006
H
HOH
2007
10
HOH
HOH
2007
H
HOH
2008
10
HOH
HOH
2008
H
HOH
2009
10
HOH
HOH
2009
H
HOH
2010
10
HOH
HOH
2010
H
HOH
2011
10
HOH
HOH
2011
H
HOH
2012
10
HOH
HOH
2012
H
HOH
2013
10
HOH
HOH
2013
H
HOH
2014
10
HOH
HOH
2014
H
HOH
2015
10
HOH
HOH
2015
H
HOH
2016
10
HOH
HOH
2016
H
HOH
2017
10
HOH
HOH
2017
H
HOH
2018
10
HOH
HOH
2018
H
HOH
2019
10
HOH
HOH
2019
H
HOH
2020
10
HOH
HOH
2020
H
HOH
2021
10
HOH
HOH
2021
H
HOH
2022
10
HOH
HOH
2022
H
HOH
2023
10
HOH
HOH
2023
H
HOH
2024
10
HOH
HOH
2024
H
HOH
2025
10
HOH
HOH
2025
H
HOH
2026
10
HOH
HOH
2026
H
HOH
2027
10
HOH
HOH
2027
H
HOH
2028
10
HOH
HOH
2028
H
HOH
2029
10
HOH
HOH
2029
H
HOH
2030
10
HOH
HOH
2030
H
HOH
2031
10
HOH
HOH
2031
H
HOH
2032
10
HOH
HOH
2032
H
HOH
2033
10
HOH
HOH
2033
H
HOH
2034
10
HOH
HOH
2034
H
HOH
2035
10
HOH
HOH
2035
H
HOH
2036
10
HOH
HOH
2036
H
HOH
2037
10
HOH
HOH
2037
H
HOH
2038
10
HOH
HOH
2038
H
HOH
2039
10
HOH
HOH
2039
H
HOH
2040
10
HOH
HOH
2040
H
HOH
2041
10
HOH
HOH
2041
H
HOH
2042
10
HOH
HOH
2042
H
HOH
2043
10
HOH
HOH
2043
H
HOH
2044
10
HOH
HOH
2044
H
HOH
2045
10
HOH
HOH
2045
H
HOH
2046
10
HOH
HOH
2046
H
HOH
2047
10
HOH
HOH
2047
H
HOH
2048
10
HOH
HOH
2048
H
HOH
2049
10
HOH
HOH
2049
H
HOH
2050
10
HOH
HOH
2050
H
HOH
2051
10
HOH
HOH
2051
H
HOH
2052
10
HOH
HOH
2052
H
HOH
2053
10
HOH
HOH
2053
H
HOH
2054
10
HOH
HOH
2054
H
HOH
2055
10
HOH
HOH
2055
H
HOH
2056
10
HOH
HOH
2056
H
HOH
2057
10
HOH
HOH
2057
H
HOH
2058
10
HOH
HOH
2058
H
HOH
2059
10
HOH
HOH
2059
H
HOH
2060
10
HOH
HOH
2060
H
HOH
2061
10
HOH
HOH
2061
H
HOH
2062
10
HOH
HOH
2062
H
HOH
2063
10
HOH
HOH
2063
H
HOH
2064
10
HOH
HOH
2064
H
HOH
2065
10
HOH
HOH
2065
H
HOH
2066
10
HOH
HOH
2066
H
HOH
2067
10
HOH
HOH
2067
H
HOH
2068
10
HOH
HOH
2068
H
HOH
2069
10
HOH
HOH
2069
H
HOH
2070
10
HOH
HOH
2070
H
HOH
2071
10
HOH
HOH
2071
H
HOH
2072
10
HOH
HOH
2072
H
HOH
2073
10
HOH
HOH
2073
H
HOH
2074
10
HOH
HOH
2074
H
HOH
2075
10
HOH
HOH
2075
H
HOH
2076
10
HOH
HOH
2076
H
HOH
2077
10
HOH
HOH
2077
H
HOH
2078
10
HOH
HOH
2078
H
HOH
2079
10
HOH
HOH
2079
H
HOH
2080
10
HOH
HOH
2080
H
HOH
2081
10
HOH
HOH
2081
H
HOH
2082
10
HOH
HOH
2082
H
HOH
2083
10
HOH
HOH
2083
H
HOH
2084
10
HOH
HOH
2084
H
HOH
2085
10
HOH
HOH
2085
H
HOH
2086
10
HOH
HOH
2086
H
HOH
2087
10
HOH
HOH
2087
H
HOH
2088
10
HOH
HOH
2088
H
HOH
2089
10
HOH
HOH
2089
H
HOH
2090
10
HOH
HOH
2090
H
HOH
2091
10
HOH
HOH
2091
H
HOH
2092
10
HOH
HOH
2092
H
HOH
2093
10
HOH
HOH
2093
H
HOH
2094
10
HOH
HOH
2094
H
HOH
2095
10
HOH
HOH
2095
H
HOH
2096
10
HOH
HOH
2096
H
HOH
2097
10
HOH
HOH
2097
H
HOH
2098
10
HOH
HOH
2098
H
HOH
2099
10
HOH
HOH
2099
H
HOH
2100
10
HOH
HOH
2100
H
HOH
2101
10
HOH
HOH
2101
H
HOH
2102
10
HOH
HOH
2102
H
HOH
2103
10
HOH
HOH
2103
H
HOH
2104
10
HOH
HOH
2104
H
HOH
2105
10
HOH
HOH
2105
H
HOH
2106
10
HOH
HOH
2106
H
HOH
2107
10
HOH
HOH
2107
H
HOH
2108
10
HOH
HOH
2108
H
HOH
2109
10
HOH
HOH
2109
H
HOH
2110
10
HOH
HOH
2110
H
HOH
2111
10
HOH
HOH
2111
H
HOH
2112
10
HOH
HOH
2112
H
HOH
2113
10
HOH
HOH
2113
H
HOH
2114
10
HOH
HOH
2114
H
HOH
2115
10
HOH
HOH
2115
H
HOH
2116
10
HOH
HOH
2116
H
HOH
2117
10
HOH
HOH
2117
H
HOH
2118
10
HOH
HOH
2118
H
HOH
2119
10
HOH
HOH
2119
H
HOH
2120
10
HOH
HOH
2120
H
HOH
2121
10
HOH
HOH
2121
H
HOH
2122
10
HOH
HOH
2122
H
HOH
2123
10
HOH
HOH
2123
H
HOH
2124
10
HOH
HOH
2124
H
HOH
2125
10
HOH
HOH
2125
H
HOH
2126
10
HOH
HOH
2126
H
HOH
2127
10
HOH
HOH
2127
H
HOH
2128
10
HOH
HOH
2128
H
HOH
2129
10
HOH
HOH
2129
H
HOH
2130
10
HOH
HOH
2130
H
HOH
2131
10
HOH
HOH
2131
H
HOH
2132
10
HOH
HOH
2132
H
HOH
2133
10
HOH
HOH
2133
H
HOH
2134
10
HOH
HOH
2134
H
HOH
2135
10
HOH
HOH
2135
H
HOH
2136
10
HOH
HOH
2136
H
HOH
2137
10
HOH
HOH
2137
H
HOH
2138
10
HOH
HOH
2138
H
HOH
2139
10
HOH
HOH
2139
H
HOH
2140
10
HOH
HOH
2140
H
HOH
2141
10
HOH
HOH
2141
H
HOH
2142
10
HOH
HOH
2142
H
HOH
2143
10
HOH
HOH
2143
H
HOH
2144
10
HOH
HOH
2144
H
HOH
2145
10
HOH
HOH
2145
H
HOH
2146
10
HOH
HOH
2146
H
HOH
2147
10
HOH
HOH
2147
H
HOH
2148
10
HOH
HOH
2148
H
HOH
2149
10
HOH
HOH
2149
H
HOH
2150
10
HOH
HOH
2150
H
HOH
2151
10
HOH
HOH
2151
H
HOH
2152
10
HOH
HOH
2152
H
HOH
2153
10
HOH
HOH
2153
H
HOH
2154
10
HOH
HOH
2154
H
HOH
2155
10
HOH
HOH
2155
H
HOH
2156
10
HOH
HOH
2156
H
HOH
2157
10
HOH
HOH
2157
H
HOH
2158
10
HOH
HOH
2158
H
HOH
2159
10
HOH
HOH
2159
H
HOH
2160
10
HOH
HOH
2160
H
HOH
2161
10
HOH
HOH
2161
H
HOH
2162
10
HOH
HOH
2162
H
HOH
2163
10
HOH
HOH
2163
H
HOH
2164
10
HOH
HOH
2164
H
HOH
2165
10
HOH
HOH
2165
H
HOH
2166
10
HOH
HOH
2166
H
HOH
2167
10
HOH
HOH
2167
H
HOH
2168
10
HOH
HOH
2168
H
HOH
2169
10
HOH
HOH
2169
H
HOH
2170
10
HOH
HOH
2170
H
HOH
2171
10
HOH
HOH
2171
H
HOH
2172
10
HOH
HOH
2172
H
HOH
2173
10
HOH
HOH
2173
H
HOH
2174
10
HOH
HOH
2174
H
HOH
2175
10
HOH
HOH
2175
H
HOH
2176
10
HOH
HOH
2176
H
HOH
2177
10
HOH
HOH
2177
H
HOH
2178
10
HOH
HOH
2178
H
HOH
2179
10
HOH
HOH
2179
H
HOH
2180
10
HOH
HOH
2180
H
HOH
2181
10
HOH
HOH
2181
H
HOH
2182
10
HOH
HOH
2182
H
HOH
2183
10
HOH
HOH
2183
H
HOH
2184
10
HOH
HOH
2184
H
HOH
2185
10
HOH
HOH
2185
H
HOH
2186
10
HOH
HOH
2186
H
HOH
2187
10
HOH
HOH
2187
H
HOH
2188
10
HOH
HOH
2188
H
HOH
2189
10
HOH
HOH
2189
H
HOH
2190
10
HOH
HOH
2190
H
HOH
2191
10
HOH
HOH
2191
H
HOH
2192
10
HOH
HOH
2192
H
HOH
2193
10
HOH
HOH
2193
H
HOH
2194
10
HOH
HOH
2194
H
HOH
2195
10
HOH
HOH
2195
H
HOH
2196
10
HOH
HOH
2196
H
HOH
2197
10
HOH
HOH
2197
H
HOH
2198
10
HOH
HOH
2198
H
HOH
2199
10
HOH
HOH
2199
H
HOH
2200
10
HOH
HOH
2200
H
HOH
2201
10
HOH
HOH
2201
H
HOH
2202
10
HOH
HOH
2202
H
HOH
2203
10
HOH
HOH
2203
H
HOH
2204
10
HOH
HOH
2204
H
HOH
2205
10
HOH
HOH
2205
H
HOH
2206
10
HOH
HOH
2206
H
HOH
2207
10
HOH
HOH
2207
H
HOH
2208
10
HOH
HOH
2208
H
HOH
2209
10
HOH
HOH
2209
H
HOH
2210
10
HOH
HOH
2210
H
HOH
2211
10
HOH
HOH
2211
H
HOH
2212
10
HOH
HOH
2212
H
HOH
2213
10
HOH
HOH
2213
H
HOH
2214
10
HOH
HOH
2214
H
HOH
2215
10
HOH
HOH
2215
H
HOH
2216
10
HOH
HOH
2216
H
HOH
2217
10
HOH
HOH
2217
H
HOH
2218
10
HOH
HOH
2218
H
HOH
2219
10
HOH
HOH
2219
H
HOH
2220
10
HOH
HOH
2220
H
HOH
2221
10
HOH
HOH
2221
H
HOH
2222
10
HOH
HOH
2222
H
HOH
2223
10
HOH
HOH
2223
H
HOH
2224
10
HOH
HOH
2224
H
HOH
2225
10
HOH
HOH
2225
H
HOH
2226
10
HOH
HOH
2226
H
HOH
2227
10
HOH
HOH
2227
H
HOH
2228
10
HOH
HOH
2228
H
HOH
2229
10
HOH
HOH
2229
H
HOH
2230
10
HOH
HOH
2230
H
HOH
2231
10
HOH
HOH
2231
H
HOH
2232
10
HOH
HOH
2232
H
HOH
2233
10
HOH
HOH
2233
H
HOH
2234
10
HOH
HOH
2234
H
HOH
2235
10
HOH
HOH
2235
H
HOH
2236
10
HOH
HOH
2236
H
HOH
2237
10
HOH
HOH
2237
H
HOH
2238
10
HOH
HOH
2238
H
HOH
2239
10
HOH
HOH
2239
H
HOH
2240
10
HOH
HOH
2240
H
HOH
2241
10
HOH
HOH
2241
H
HOH
2242
10
HOH
HOH
2242
H
HOH
2243
10
HOH
HOH
2243
H
HOH
2244
10
HOH
HOH
2244
H
HOH
2245
10
HOH
HOH
2245
H
HOH
2246
10
HOH
HOH
2246
H
HOH
2247
10
HOH
HOH
2247
H
HOH
2248
10
HOH
HOH
2248
H
HOH
2249
10
HOH
HOH
2249
H
HOH
2250
10
HOH
HOH
2250
H
HOH
2251
10
HOH
HOH
2251
H
HOH
2252
10
HOH
HOH
2252
H
HOH
2253
10
HOH
HOH
2253
H
HOH
2254
10
HOH
HOH
2254
H
HOH
2255
10
HOH
HOH
2255
H
HOH
2256
10
HOH
HOH
2256
H
HOH
2257
10
HOH
HOH
2257
H
HOH
2258
10
HOH
HOH
2258
H
HOH
2259
10
HOH
HOH
2259
H
HOH
2260
10
HOH
HOH
2260
H
HOH
2261
10
HOH
HOH
2261
H
HOH
2262
10
HOH
HOH
2262
H
HOH
2263
10
HOH
HOH
2263
H
HOH
2264
10
HOH
HOH
2264
H
HOH
2265
10
HOH
HOH
2265
H
HOH
2266
10
HOH
HOH
2266
H
HOH
2267
10
HOH
HOH
2267
H
HOH
2268
10
HOH
HOH
2268
H
HOH
2269
10
HOH
HOH
2269
H
HOH
2270
10
HOH
HOH
2270
H
HOH
2271
10
HOH
HOH
2271
H
HOH
2272
10
HOH
HOH
2272
H
HOH
2273
10
HOH
HOH
2273
H
HOH
2274
10
HOH
HOH
2274
H
HOH
2275
10
HOH
HOH
2275
H
HOH
2276
10
HOH
HOH
2276
H
HOH
2277
10
HOH
HOH
2277
H
HOH
2278
10
HOH
HOH
2278
H
HOH
2279
10
HOH
HOH
2279
H
HOH
2280
10
HOH
HOH
2280
H
HOH
2281
10
HOH
HOH
2281
H
HOH
2282
10
HOH
HOH
2282
H
HOH
2283
10
HOH
HOH
2283
H
HOH
2284
10
HOH
HOH
2284
H
HOH
2001
10
HOH
HOH
2001
I
HOH
2002
10
HOH
HOH
2002
I
HOH
2003
10
HOH
HOH
2003
I
HOH
2004
10
HOH
HOH
2004
I
HOH
2001
10
HOH
HOH
2001
L
HOH
2002
10
HOH
HOH
2002
L
HOH
2003
10
HOH
HOH
2003
L
HOH
2004
10
HOH
HOH
2004
L
HOH
2005
10
HOH
HOH
2005
L
HOH
2006
10
HOH
HOH
2006
L
HOH
2007
10
HOH
HOH
2007
L
HOH
2008
10
HOH
HOH
2008
L
HOH
2009
10
HOH
HOH
2009
L
HOH
2010
10
HOH
HOH
2010
L
HOH
2011
10
HOH
HOH
2011
L
HOH
2012
10
HOH
HOH
2012
L
HOH
2013
10
HOH
HOH
2013
L
HOH
2014
10
HOH
HOH
2014
L
HOH
2015
10
HOH
HOH
2015
L
HOH
2016
10
HOH
HOH
2016
L
HOH
2017
10
HOH
HOH
2017
L
HOH
2018
10
HOH
HOH
2018
L
HOH
2019
10
HOH
HOH
2019
L
HOH
2020
10
HOH
HOH
2020
L
HOH
2021
10
HOH
HOH
2021
L
HOH
2022
10
HOH
HOH
2022
L
HOH
2023
10
HOH
HOH
2023
L
HOH
2024
10
HOH
HOH
2024
L
HOH
2025
10
HOH
HOH
2025
L
HOH
2026
10
HOH
HOH
2026
L
HOH
2027
10
HOH
HOH
2027
L
HOH
2028
10
HOH
HOH
2028
L
HOH
2029
10
HOH
HOH
2029
L
HOH
2030
10
HOH
HOH
2030
L
HOH
2031
10
HOH
HOH
2031
L
HOH
2032
10
HOH
HOH
2032
L
HOH
2033
10
HOH
HOH
2033
L
HOH
2034
10
HOH
HOH
2034
L
HOH
2035
10
HOH
HOH
2035
L
HOH
2036
10
HOH
HOH
2036
L
HOH
2037
10
HOH
HOH
2037
L
HOH
2038
10
HOH
HOH
2038
L
ILE
16
n
1
ILE
16
H
VAL
17
n
2
VAL
17
H
GLU
18
n
3
GLU
18
H
GLY
19
n
4
GLY
19
H
SER
20
n
5
SER
20
H
ASP
21
n
6
ASP
21
H
ALA
22
n
7
ALA
22
H
GLU
23
n
8
GLU
23
H
ILE
24
n
9
ILE
24
H
GLY
25
n
10
GLY
25
H
MET
26
n
11
MET
26
H
SER
27
n
12
SER
27
H
PRO
28
n
13
PRO
28
H
TRP
29
n
14
TRP
29
H
GLN
30
n
15
GLN
30
H
VAL
31
n
16
VAL
31
H
MET
32
n
17
MET
32
H
LEU
33
n
18
LEU
33
H
PHE
34
n
19
PHE
34
H
ARG
35
n
20
ARG
35
H
LYS
36
n
21
LYS
36
H
SER
36
n
22
A
SER
36
H
PRO
37
n
23
PRO
37
H
GLN
38
n
24
GLN
38
H
GLU
39
n
25
GLU
39
H
LEU
40
n
26
LEU
40
H
LEU
41
n
27
LEU
41
H
CYS
42
n
28
CYS
42
H
GLY
43
n
29
GLY
43
H
ALA
44
n
30
ALA
44
H
SER
45
n
31
SER
45
H
LEU
46
n
32
LEU
46
H
ILE
47
n
33
ILE
47
H
SER
48
n
34
SER
48
H
ASP
49
n
35
ASP
49
H
ARG
50
n
36
ARG
50
H
TRP
51
n
37
TRP
51
H
VAL
52
n
38
VAL
52
H
LEU
53
n
39
LEU
53
H
THR
54
n
40
THR
54
H
ALA
55
n
41
ALA
55
H
ALA
56
n
42
ALA
56
H
HIS
57
n
43
HIS
57
H
CYS
58
n
44
CYS
58
H
LEU
59
n
45
LEU
59
H
LEU
60
n
46
LEU
60
H
TYR
60
n
47
A
TYR
60
H
PRO
60
n
48
B
PRO
60
H
PRO
60
n
49
C
PRO
60
H
TRP
60
n
50
D
TRP
60
H
ASP
60
n
51
E
ASP
60
H
LYS
60
n
52
F
LYS
60
H
ASN
60
n
53
G
ASN
60
H
PHE
60
n
54
H
PHE
60
H
THR
60
n
55
I
THR
60
H
GLU
61
n
56
GLU
61
H
ASN
62
n
57
ASN
62
H
ASP
63
n
58
ASP
63
H
LEU
64
n
59
LEU
64
H
LEU
65
n
60
LEU
65
H
VAL
66
n
61
VAL
66
H
ARG
67
n
62
ARG
67
H
ILE
68
n
63
ILE
68
H
GLY
69
n
64
GLY
69
H
LYS
70
n
65
LYS
70
H
HIS
71
n
66
HIS
71
H
SER
72
n
67
SER
72
H
ARG
73
n
68
ARG
73
H
THR
74
n
69
THR
74
H
ARG
75
n
70
ARG
75
H
TYR
76
n
71
TYR
76
H
GLU
77
n
72
GLU
77
H
ARG
77
n
73
A
ARG
77
H
ASN
78
n
74
ASN
78
H
ILE
79
n
75
ILE
79
H
GLU
80
n
76
GLU
80
H
LYS
81
n
77
LYS
81
H
ILE
82
n
78
ILE
82
H
SER
83
n
79
SER
83
H
MET
84
n
80
MET
84
H
LEU
85
n
81
LEU
85
H
GLU
86
n
82
GLU
86
H
LYS
87
n
83
LYS
87
H
ILE
88
n
84
ILE
88
H
TYR
89
n
85
TYR
89
H
ILE
90
n
86
ILE
90
H
HIS
91
n
87
HIS
91
H
PRO
92
n
88
PRO
92
H
ARG
93
n
89
ARG
93
H
TYR
94
n
90
TYR
94
H
ASN
95
n
91
ASN
95
H
TRP
96
n
92
TRP
96
H
ARG
97
n
93
ARG
97
H
GLU
97
n
94
A
GLU
97
H
ASN
98
n
95
ASN
98
H
LEU
99
n
96
LEU
99
H
ASP
100
n
97
ASP
100
H
ARG
101
n
98
ARG
101
H
ASP
102
n
99
ASP
102
H
ILE
103
n
100
ILE
103
H
ALA
104
n
101
ALA
104
H
LEU
105
n
102
LEU
105
H
MET
106
n
103
MET
106
H
LYS
107
n
104
LYS
107
H
LEU
108
n
105
LEU
108
H
LYS
109
n
106
LYS
109
H
LYS
110
n
107
LYS
110
H
PRO
111
n
108
PRO
111
H
VAL
112
n
109
VAL
112
H
ALA
113
n
110
ALA
113
H
PHE
114
n
111
PHE
114
H
SER
115
n
112
SER
115
H
ASP
116
n
113
ASP
116
H
TYR
117
n
114
TYR
117
H
ILE
118
n
115
ILE
118
H
HIS
119
n
116
HIS
119
H
PRO
120
n
117
PRO
120
H
VAL
121
n
118
VAL
121
H
CYS
122
n
119
CYS
122
H
LEU
123
n
120
LEU
123
H
PRO
124
n
121
PRO
124
H
ASP
125
n
122
ASP
125
H
ARG
126
n
123
ARG
126
H
GLU
127
n
124
GLU
127
H
THR
128
n
125
THR
128
H
ALA
129
n
126
ALA
129
H
ALA
129
n
127
A
ALA
129
H
SER
129
n
128
B
SER
129
H
LEU
129
n
129
C
LEU
129
H
LEU
130
n
130
LEU
130
H
GLN
131
n
131
GLN
131
H
ALA
132
n
132
ALA
132
H
GLY
133
n
133
GLY
133
H
TYR
134
n
134
TYR
134
H
LYS
135
n
135
LYS
135
H
GLY
136
n
136
GLY
136
H
ARG
137
n
137
ARG
137
H
VAL
138
n
138
VAL
138
H
THR
139
n
139
THR
139
H
GLY
140
n
140
GLY
140
H
TRP
141
n
141
TRP
141
H
GLY
142
n
142
GLY
142
H
ASN
143
n
143
ASN
143
H
LEU
144
n
144
LEU
144
H
LYS
145
n
145
LYS
145
H
GLU
146
n
146
GLU
146
H
THR
147
n
147
THR
147
H
n
148
A
147
H
n
149
B
147
H
n
150
C
147
H
n
151
D
147
H
n
152
E
147
H
n
153
F
147
H
n
154
G
147
H
GLY
150
n
155
GLY
150
H
GLN
151
n
156
GLN
151
H
PRO
152
n
157
PRO
152
H
SER
153
n
158
SER
153
H
VAL
154
n
159
VAL
154
H
LEU
155
n
160
LEU
155
H
GLN
156
n
161
GLN
156
H
VAL
157
n
162
VAL
157
H
VAL
158
n
163
VAL
158
H
ASN
159
n
164
ASN
159
H
LEU
160
n
165
LEU
160
H
PRO
161
n
166
PRO
161
H
ILE
162
n
167
ILE
162
H
VAL
163
n
168
VAL
163
H
GLU
164
n
169
GLU
164
H
ARG
165
n
170
ARG
165
H
PRO
166
n
171
PRO
166
H
VAL
167
n
172
VAL
167
H
CYS
168
n
173
CYS
168
H
LYS
169
n
174
LYS
169
H
ASP
170
n
175
ASP
170
H
SER
171
n
176
SER
171
H
THR
172
n
177
THR
172
H
ARG
173
n
178
ARG
173
H
ILE
174
n
179
ILE
174
H
ARG
175
n
180
ARG
175
H
ILE
176
n
181
ILE
176
H
THR
177
n
182
THR
177
H
ASP
178
n
183
ASP
178
H
ASN
179
n
184
ASN
179
H
MET
180
n
185
MET
180
H
PHE
181
n
186
PHE
181
H
CYS
182
n
187
CYS
182
H
ALA
183
n
188
ALA
183
H
GLY
184
n
189
GLY
184
H
TYR
184
n
190
A
TYR
184
H
LYS
185
n
191
LYS
185
H
PRO
186
n
192
PRO
186
H
ASP
186
n
193
A
ASP
186
H
GLU
186
n
194
B
GLU
186
H
GLY
186
n
195
C
GLY
186
H
LYS
186
n
196
D
LYS
186
H
ARG
187
n
197
ARG
187
H
GLY
188
n
198
GLY
188
H
ASP
189
n
199
ASP
189
H
ALA
190
n
200
ALA
190
H
CYS
191
n
201
CYS
191
H
GLU
192
n
202
GLU
192
H
GLY
193
n
203
GLY
193
H
ASP
194
n
204
ASP
194
H
SER
195
n
205
SER
195
H
GLY
196
n
206
GLY
196
H
GLY
197
n
207
GLY
197
H
PRO
198
n
208
PRO
198
H
PHE
199
n
209
PHE
199
H
VAL
200
n
210
VAL
200
H
MET
201
n
211
MET
201
H
LYS
202
n
212
LYS
202
H
SER
203
n
213
SER
203
H
PRO
204
n
214
PRO
204
H
PHE
204
n
215
A
PHE
204
H
ASN
204
n
216
B
ASN
204
H
ASN
205
n
217
ASN
205
H
ARG
206
n
218
ARG
206
H
TRP
207
n
219
TRP
207
H
TYR
208
n
220
TYR
208
H
GLN
209
n
221
GLN
209
H
MET
210
n
222
MET
210
H
GLY
211
n
223
GLY
211
H
ILE
212
n
224
ILE
212
H
VAL
213
n
225
VAL
213
H
SER
214
n
226
SER
214
H
TRP
215
n
227
TRP
215
H
GLY
216
n
228
GLY
216
H
GLU
217
n
229
GLU
217
H
GLY
219
n
230
GLY
219
H
CYS
220
n
231
CYS
220
H
ASP
221
n
232
ASP
221
H
ARG
221
n
233
A
ARG
221
H
ASP
222
n
234
ASP
222
H
GLY
223
n
235
GLY
223
H
LYS
224
n
236
LYS
224
H
TYR
225
n
237
TYR
225
H
GLY
226
n
238
GLY
226
H
PHE
227
n
239
PHE
227
H
TYR
228
n
240
TYR
228
H
THR
229
n
241
THR
229
H
HIS
230
n
242
HIS
230
H
VAL
231
n
243
VAL
231
H
PHE
232
n
244
PHE
232
H
ARG
233
n
245
ARG
233
H
LEU
234
n
246
LEU
234
H
LYS
235
n
247
LYS
235
H
LYS
236
n
248
LYS
236
H
TRP
237
n
249
TRP
237
H
ILE
238
n
250
ILE
238
H
GLN
239
n
251
GLN
239
H
LYS
240
n
252
LYS
240
H
VAL
241
n
253
VAL
241
H
ILE
242
n
254
ILE
242
H
ASP
243
n
255
ASP
243
H
GLN
244
n
256
GLN
244
H
PHE
245
n
257
PHE
245
H
GLY
246
n
258
GLY
246
H
GLY
554
n
1
GLY
554
I
ASP
555
n
2
ASP
555
I
PHE
556
n
3
PHE
556
I
GLU
557
n
4
GLU
557
I
GLU
558
n
5
GLU
558
I
ILE
559
n
6
ILE
559
I
PRO
560
n
7
PRO
560
I
GLU
561
n
8
GLU
561
I
GLU
562
n
9
GLU
562
I
TYS
1255
n
10
TYS
563
I
LEU
564
n
11
LEU
564
I
GLN
565
n
12
GLN
565
I
GLU
1
n
1
C
GLU
1
L
ALA
1
n
2
B
ALA
1
L
ASP
1
n
3
A
ASP
1
L
CYS
1
n
4
CYS
1
L
GLY
2
n
5
GLY
2
L
LEU
3
n
6
LEU
3
L
ARG
4
n
7
ARG
4
L
PRO
5
n
8
PRO
5
L
LEU
6
n
9
LEU
6
L
PHE
7
n
10
PHE
7
L
GLU
8
n
11
GLU
8
L
LYS
9
n
12
LYS
9
L
LYS
10
n
13
LYS
10
L
SER
11
n
14
SER
11
L
LEU
12
n
15
LEU
12
L
GLU
13
n
16
GLU
13
L
ASP
14
n
17
ASP
14
L
LYS
14
n
18
A
LYS
14
L
THR
14
n
19
B
THR
14
L
GLU
14
n
20
C
GLU
14
L
ARG
14
n
21
D
ARG
14
L
GLU
14
n
22
E
GLU
14
L
LEU
14
n
23
F
LEU
14
L
LEU
14
n
24
G
LEU
14
L
GLU
14
n
25
H
GLU
14
L
SER
14
n
26
I
SER
14
L
TYR
14
n
27
J
TYR
14
L
ILE
14
n
28
K
ILE
14
L
ASP
15
n
29
ASP
15
L
author_and_software_defined_assembly
PISA
3
trimeric
5090
-35.0
12760
H
LYS
169
A
O
LYS
174
1_555
H
NA
1247
E
NA
NA
1_555
H
THR
172
A
O
THR
177
1_555
81.8
H
LYS
169
A
O
LYS
174
1_555
H
NA
1247
E
NA
NA
1_555
A
H
PHE
204
A
O
PHE
215
4_746
100.5
H
THR
172
A
O
THR
177
1_555
H
NA
1247
E
NA
NA
1_555
A
H
PHE
204
A
O
PHE
215
4_746
98.7
H
LYS
169
A
O
LYS
174
1_555
H
NA
1247
E
NA
NA
1_555
H
HOH
2211
M
O
HOH
1_555
69.2
H
THR
172
A
O
THR
177
1_555
H
NA
1247
E
NA
NA
1_555
H
HOH
2211
M
O
HOH
1_555
78.6
A
H
PHE
204
A
O
PHE
215
4_746
H
NA
1247
E
NA
NA
1_555
H
HOH
2211
M
O
HOH
1_555
169.6
H
LYS
169
A
O
LYS
174
1_555
H
NA
1247
E
NA
NA
1_555
H
HOH
2212
M
O
HOH
1_555
82.2
H
THR
172
A
O
THR
177
1_555
H
NA
1247
E
NA
NA
1_555
H
HOH
2212
M
O
HOH
1_555
163.8
A
H
PHE
204
A
O
PHE
215
4_746
H
NA
1247
E
NA
NA
1_555
H
HOH
2212
M
O
HOH
1_555
81.5
H
HOH
2211
M
O
HOH
1_555
H
NA
1247
E
NA
NA
1_555
H
HOH
2212
M
O
HOH
1_555
98.3
H
LYS
169
A
O
LYS
174
1_555
H
NA
1247
E
NA
NA
1_555
H
HOH
2216
M
O
HOH
1_555
173.6
H
THR
172
A
O
THR
177
1_555
H
NA
1247
E
NA
NA
1_555
H
HOH
2216
M
O
HOH
1_555
94.8
A
H
PHE
204
A
O
PHE
215
4_746
H
NA
1247
E
NA
NA
1_555
H
HOH
2216
M
O
HOH
1_555
85.3
H
HOH
2211
M
O
HOH
1_555
H
NA
1247
E
NA
NA
1_555
H
HOH
2216
M
O
HOH
1_555
104.8
H
HOH
2212
M
O
HOH
1_555
H
NA
1247
E
NA
NA
1_555
H
HOH
2216
M
O
HOH
1_555
101.4
A
H
ARG
221
A
O
ARG
233
1_555
H
NA
1246
D
NA
NA
1_555
H
LYS
224
A
O
LYS
236
1_555
94.5
A
H
ARG
221
A
O
ARG
233
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2230
M
O
HOH
1_555
161.1
H
LYS
224
A
O
LYS
236
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2230
M
O
HOH
1_555
70.3
A
H
ARG
221
A
O
ARG
233
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2231
M
O
HOH
1_555
86.8
H
LYS
224
A
O
LYS
236
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2231
M
O
HOH
1_555
91.3
H
HOH
2230
M
O
HOH
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2231
M
O
HOH
1_555
82.6
A
H
ARG
221
A
O
ARG
233
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2240
M
O
HOH
1_555
99.2
H
LYS
224
A
O
LYS
236
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2240
M
O
HOH
1_555
84.4
H
HOH
2230
M
O
HOH
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2240
M
O
HOH
1_555
90.6
H
HOH
2231
M
O
HOH
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2240
M
O
HOH
1_555
172.9
A
H
ARG
221
A
O
ARG
233
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2265
M
O
HOH
1_555
105.9
H
LYS
224
A
O
LYS
236
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2265
M
O
HOH
1_555
158.8
H
HOH
2230
M
O
HOH
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2265
M
O
HOH
1_555
88.5
H
HOH
2231
M
O
HOH
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2265
M
O
HOH
1_555
84.1
H
HOH
2240
M
O
HOH
1_555
H
NA
1246
D
NA
NA
1_555
H
HOH
2265
M
O
HOH
1_555
97.9
I
TYS
563
modified residue
B
TYS
10
TYR
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
H
N
SER
20
A
N
SER
5
H
O
VAL
157
A
O
VAL
162
H
N
LEU
160
A
N
LEU
165
H
O
GLY
136
A
O
GLY
136
H
N
THR
139
A
N
THR
139
H
O
PRO
198
A
O
PRO
208
H
N
MET
201
A
N
MET
211
H
O
TYR
208
A
O
TYR
220
H
N
SER
214
A
N
SER
226
H
O
PHE
227
A
O
PHE
239
H
N
TYR
228
A
N
TYR
240
H
O
PHE
181
A
O
PHE
186
H
N
ARG
35
A
N
ARG
20
H
O
GLU
39
A
O
GLU
25
H
N
SER
45
A
N
SER
31
H
O
LEU
53
A
O
LEU
39
H
N
THR
54
A
N
THR
40
H
O
ALA
104
A
O
ALA
101
H
O
LYS
107
A
O
LYS
104
H
N
GLU
86
A
N
GLU
82
H
N
LEU
85
A
N
LEU
81
H
O
LEU
64
A
O
LEU
59
H
N
ARG
67
A
N
ARG
62
H
O
MET
32
A
O
MET
17
A
H
N
TYR
60
A
N
TYR
47
F
H
O
LYS
60
A
O
LYS
52
1
H
ARG
75
A
ARG
70
1
H
HOH
2103
M
HOH
A
1
H
OG
SER
36
A
OG
SER
22
1
Y
1
H
NE
ARG
50
A
NE
ARG
36
1
Y
1
H
CZ
ARG
50
A
CZ
ARG
36
1
Y
1
H
NH1
ARG
50
A
NH1
ARG
36
1
Y
1
H
NH2
ARG
50
A
NH2
ARG
36
1
Y
1
H
OE1
GLU
86
A
OE1
GLU
82
1
Y
1
H
OE2
GLU
86
A
OE2
GLU
82
1
Y
1
H
CE
LYS
87
A
CE
LYS
83
1
Y
1
H
NZ
LYS
87
A
NZ
LYS
83
1
Y
1
H
NZ
LYS
109
A
NZ
LYS
106
1
Y
1
H
CE
LYS
110
A
CE
LYS
107
1
Y
1
H
NZ
LYS
110
A
NZ
LYS
107
1
Y
1
H
OG1
THR
147
A
OG1
THR
147
1
Y
1
H
CG2
THR
147
A
CG2
THR
147
1
Y
D
1
H
CE
LYS
186
A
CE
LYS
196
1
Y
D
1
H
NZ
LYS
186
A
NZ
LYS
196
1
Y
1
H
CD
GLU
192
A
CD
GLU
202
1
Y
1
H
OE1
GLU
192
A
OE1
GLU
202
1
Y
1
H
OE2
GLU
192
A
OE2
GLU
202
1
Y
1
H
CD
LYS
236
A
CD
LYS
248
1
Y
1
H
CE
LYS
236
A
CE
LYS
248
1
Y
1
H
NZ
LYS
236
A
NZ
LYS
248
1
Y
1
H
CD
LYS
240
A
CD
LYS
252
1
Y
1
H
CE
LYS
240
A
CE
LYS
252
1
Y
1
H
NZ
LYS
240
A
NZ
LYS
252
1
Y
1
H
CG
GLN
244
A
CG
GLN
256
1
Y
1
H
CD
GLN
244
A
CD
GLN
256
1
Y
1
H
OE1
GLN
244
A
OE1
GLN
256
1
Y
1
H
NE2
GLN
244
A
NE2
GLN
256
1
Y
1
H
CA
GLY
246
A
CA
GLY
258
1
Y
1
H
C
GLY
246
A
C
GLY
258
1
Y
1
H
O
GLY
246
A
O
GLY
258
1
Y
1
I
CG
ASP
555
B
CG
ASP
2
1
Y
1
I
OD1
ASP
555
B
OD1
ASP
2
1
Y
1
I
OD2
ASP
555
B
OD2
ASP
2
1
Y
1
I
CG
GLU
558
B
CG
GLU
5
1
Y
1
I
CD
GLU
558
B
CD
GLU
5
1
Y
1
I
OE1
GLU
558
B
OE1
GLU
5
1
Y
1
I
OE2
GLU
558
B
OE2
GLU
5
1
Y
1
I
CG
GLU
561
B
CG
GLU
8
1
Y
1
I
CD
GLU
561
B
CD
GLU
8
1
Y
1
I
OE1
GLU
561
B
OE1
GLU
8
1
Y
1
I
OE2
GLU
561
B
OE2
GLU
8
1
Y
1
I
OE1
GLU
562
B
OE1
GLU
9
1
Y
1
I
OE2
GLU
562
B
OE2
GLU
9
1
Y
1
I
CD1
LEU
564
B
CD1
LEU
11
1
Y
1
I
CD2
LEU
564
B
CD2
LEU
11
1
Y
1
I
CG
GLN
565
B
CG
GLN
12
1
Y
1
I
CD
GLN
565
B
CD
GLN
12
1
Y
1
I
OE1
GLN
565
B
OE1
GLN
12
1
Y
1
I
NE2
GLN
565
B
NE2
GLN
12
1
Y
C
1
L
CG
GLU
1
C
CG
GLU
1
1
Y
C
1
L
CD
GLU
1
C
CD
GLU
1
1
Y
C
1
L
OE1
GLU
1
C
OE1
GLU
1
1
Y
C
1
L
OE2
GLU
1
C
OE2
GLU
1
1
Y
1
L
CA
ASP
15
C
CA
ASP
29
1
Y
1
L
C
ASP
15
C
C
ASP
29
1
Y
1
L
O
ASP
15
C
O
ASP
29
1
Y
1
L
CB
ASP
15
C
CB
ASP
29
1
Y
1
L
CG
ASP
15
C
CG
ASP
29
1
Y
1
L
OD1
ASP
15
C
OD1
ASP
29
1
Y
1
L
OD2
ASP
15
C
OD2
ASP
29
1
Y
A
1
H
TRP
147
A
TRP
148
1
Y
B
1
H
THR
147
A
THR
149
1
Y
C
1
H
ALA
147
A
ALA
150
1
Y
D
1
H
ASN
147
A
ASN
151
1
Y
E
1
H
VAL
147
A
VAL
152
1
Y
F
1
H
GLY
147
A
GLY
153
1
Y
G
1
H
LYS
147
A
LYS
154
1
Y
1
H
H
OE2
O
GLU
HOH
127
2270
2.19
1_555
4_756
A
1
H
TYR
60
-153.40
84.75
G
1
H
ASN
60
-158.53
80.89
1
H
HIS
71
-130.09
-62.61
1
H
ILE
79
-127.12
-62.38
A
1
H
GLU
97
-117.86
-70.29
1
L
PHE
7
-129.42
-90.72
18.90
DISORDERED REGIONS WERE NOT MODELED.
0.1382
0.1220
0.1228
1.120
18.446
6768
134537
5.0
99.25
0.08
1
1.34
MOLECULAR REPLACEMENT
11.84
0.90
1.11
PDB ENTRY 4UE7
ML
FLAT BULK SOLVENT MODEL
1.120
18.446
326
2690
67
0
2297
0.011
2523
1.445
3424
15.260
1000
0.092
361
0.009
437
0.2099
0.2040
1.1325
220
4096
96.00
0.1888
0.1789
1.1458
218
4266
99.00
0.1743
0.1757
1.1597
240
4231
100.00
0.1739
0.1607
1.1744
182
4331
100.00
0.1603
0.1594
1.1899
244
4259
100.00
0.1838
0.1551
1.2062
221
4243
100.00
0.1667
0.1474
1.2234
241
4311
100.00
0.1691
0.1386
1.2417
226
4226
100.00
0.1537
0.1327
1.2611
230
4292
100.00
0.1431
0.1278
1.2817
259
4268
100.00
0.1519
0.1227
1.3038
220
4255
100.00
0.1443
0.1141
1.3275
231
4314
100.00
0.1304
0.1098
1.3530
210
4301
100.00
0.1182
0.1057
1.3807
229
4256
100.00
0.1281
0.1009
1.4107
190
4310
100.00
0.1153
0.0916
1.4435
234
4252
100.00
0.1073
0.0922
1.4796
210
4340
100.00
0.1087
0.0895
1.5195
215
4287
100.00
0.1138
0.0842
1.5642
246
4278
100.00
0.1064
0.0872
1.6147
231
4275
100.00
0.1125
0.0907
1.6724
234
4272
100.00
0.1132
0.0932
1.7393
238
4260
100.00
0.1164
0.0999
1.8184
213
4270
100.00
0.1214
0.1096
1.9141
215
4300
99.00
0.1341
0.1085
2.0339
264
4233
99.00
0.1325
0.1077
2.1907
240
4268
99.00
0.1469
0.1174
2.4108
226
4275
99.00
0.1467
0.1289
2.7586
227
4254
98.00
0.1509
0.1364
3.4718
207
4183
97.00
0.1450
0.1456
18.4487
207
4063
92.00
11.39
1.12
18.45
5AFY
134540
2.5
0.04
1
25.70
3.1
99.3
0.40
1.12
1.16
2.50
1
2.8
98.5
refinement
PHENIX
(PHENIX.REFINE)
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHASER
Thrombin in complex with 3-chloro-benzamide
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
6
N
N
6
N
N
7
N
N
8
N
N
8
N
N
9
N
N
10
N
N
10
N
N
10
N
N
H
ALA
55
A
ALA
41
HELX_P
H
CYS
58
A
CYS
44
5
1
4
H
PRO
60
A
PRO
48
HELX_P
H
ASP
60
A
ASP
51
5
2
4
B
E
H
THR
60
A
THR
55
HELX_P
H
ASN
62
A
ASN
57
5
3
3
I
H
ASP
125
A
ASP
122
HELX_P
H
LEU
130
A
LEU
130
1
4
9
H
GLU
164
A
GLU
169
HELX_P
H
SER
171
A
SER
176
1
5
8
H
LYS
185
A
LYS
191
HELX_P
H
GLY
186
A
GLY
195
5
6
5
C
H
LEU
234
A
LEU
246
HELX_P
H
PHE
245
A
PHE
257
1
7
12
L
PHE
7
C
PHE
10
HELX_P
L
SER
11
C
SER
14
5
8
5
L
THR
14
C
THR
19
HELX_P
L
TYR
14
C
TYR
27
1
9
9
B
J
disulf
2.059
H
CYS
42
A
SG
CYS
28
1_555
H
CYS
58
A
SG
CYS
44
1_555
disulf
2.054
H
CYS
122
A
SG
CYS
119
1_555
L
CYS
1
C
SG
CYS
4
1_555
disulf
2.037
H
CYS
168
A
SG
CYS
173
1_555
H
CYS
182
A
SG
CYS
187
1_555
disulf
2.054
H
CYS
191
A
SG
CYS
201
1_555
H
CYS
220
A
SG
CYS
231
1_555
covale
1.428
one
G
N-Glycosylation
H
ASN
60
A
ND2
ASN
53
1_555
H
NAG
1256
L
C1
NAG
1_555
covale
1.332
both
I
GLU
562
B
C
GLU
9
1_555
I
TYS
563
B
N
TYS
10
1_555
covale
1.329
both
I
TYS
563
B
C
TYS
10
1_555
I
LEU
564
B
N
LEU
11
1_555
metalc
2.362
H
LYS
169
A
O
LYS
174
1_555
H
NA
1247
E
NA
NA
1_555
metalc
2.315
H
THR
172
A
O
THR
177
1_555
H
NA
1247
E
NA
NA
1_555
metalc
2.373
A
H
PHE
204
A
O
PHE
215
4_746
H
NA
1247
E
NA
NA
1_555
metalc
2.321
A
H
ARG
221
A
O
ARG
233
1_555
H
NA
1246
D
NA
NA
1_555
metalc
2.362
H
LYS
224
A
O
LYS
236
1_555
H
NA
1246
D
NA
NA
1_555
metalc
2.478
H
NA
1246
D
NA
NA
1_555
H
HOH
2230
M
O
HOH
1_555
metalc
2.648
H
NA
1246
D
NA
NA
1_555
H
HOH
2231
M
O
HOH
1_555
metalc
2.355
H
NA
1246
D
NA
NA
1_555
H
HOH
2240
M
O
HOH
1_555
metalc
2.385
H
NA
1246
D
NA
NA
1_555
H
HOH
2265
M
O
HOH
1_555
metalc
2.612
H
NA
1247
E
NA
NA
1_555
H
HOH
2211
M
O
HOH
1_555
metalc
2.420
H
NA
1247
E
NA
NA
1_555
H
HOH
2212
M
O
HOH
1_555
metalc
2.374
H
NA
1247
E
NA
NA
1_555
H
HOH
2216
M
O
HOH
1_555
BLOOD CLOTTING
HYDROLASE, HYDROLASE INHIBITOR COMPLEX, SERINE PROTEASE, BLOOD COAGULATION, BLOOD CLOTTING, CONVERTION OF FIBRINOGEN TO FIBRIN, BLOOD CLOTTING INHIBITOR, THROMBIN INHIBITOR, FRAGMENT, GLYCOSYLATION, BLOOD
H
SER
36
A
SER
22
A
1
H
PRO
37
A
PRO
23
-3.89
THRB_HUMAN
UNP
1
364
P00734
IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM
LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL
QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY
THVFRLKKWIQKVIDQFG
HIR2_HIRME
UNP
2
54
P28504
GDFEEIPEEYLQ
THRB_HUMAN
UNP
3
333
P00734
EADCGLRPLFEKKSLEDKTERELLESYID
364
621
5AFY
16
246
P00734
H
1
1
258
54
65
5AFY
554
565
P28504
I
2
1
12
333
361
5AFY
1
15
P00734
C
L
3
1
29
7
7
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
H
SER
20
A
SER
5
H
ASP
21
A
ASP
6
H
GLN
156
A
GLN
161
H
PRO
161
A
PRO
166
H
LYS
135
A
LYS
135
H
GLY
140
A
GLY
140
H
PRO
198
A
PRO
208
H
LYS
202
A
LYS
212
H
TRP
207
A
TRP
219
H
TRP
215
A
TRP
227
H
GLY
226
A
GLY
238
H
HIS
230
A
HIS
242
H
MET
180
A
MET
185
H
ALA
183
A
ALA
188
H
GLN
30
A
GLN
15
H
ARG
35
A
ARG
20
H
GLU
39
A
GLU
25
H
LEU
46
A
LEU
32
H
TRP
51
A
TRP
37
H
THR
54
A
THR
40
H
ALA
104
A
ALA
101
H
LEU
108
A
LEU
105
H
LYS
81
A
LYS
77
H
ILE
90
A
ILE
86
H
LEU
64
A
LEU
59
H
ILE
68
A
ILE
63
H
GLN
30
A
GLN
15
H
ARG
35
A
ARG
20
H
LEU
60
A
LEU
46
H
TYR
60
A
TYR
47
A
H
LYS
60
A
LYS
52
H
ASN
60
A
ASN
53
F
G
5
C 1 2 1