0.014656
0.000000
0.000000
0.000000
0.013442
0.000000
0.000000
0.000000
0.012517
0.00000
0.00000
0.00000
Nagae, M.
Yamaguchi, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
68.232
74.392
79.890
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
1089-8638
428
4087
4099
10.1016/j.jmb.2016.08.023
27569046
3D Structure and Interaction of p24 beta and p24 delta Golgi Dynamics Domains: Implication for p24 Complex Formation and Cargo Transport
2016
95
1
CCD
2011-11-07
ADSC QUANTUM 270
SINGLE WAVELENGTH
M
x-ray
1
0.98
1.0
BL-17A
Photon Factory
0.98
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-17A
11345.822
Transmembrane emp24 domain-containing protein 10
UNP residues 32-132
L1G/G2S
4
man
polymer
96.063
SULFATE ION
5
syn
non-polymer
18.015
water
90
nat
water
21 kDa transmembrane-trafficking protein,Transmembrane protein Tmp21,p24 family protein delta-1,p24delta1
no
no
GSISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCF
ESKGTGRIPDQLVILDMKHGVEA
GSISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCF
ESKGTGRIPDQLVILDMKHGVEA
A,B,C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Rat
sample
1
103
Tmed10, Tmp21
10116
Rattus norvegicus
562
Escherichia coli
Biological sequence
pCOLD
2.23
44.94
VAPOR DIFFUSION, HANGING DROP
5.5
0.1 M sodium citrate (pH 5.5) and 2.0 M ammonium sulfate
293
citation
diffrn_source
pdbx_struct_oper_list
repository
Initial release
Database references
Data collection
Database references
Derived calculations
1
0
2016-09-14
1
1
2016-10-19
1
2
2020-02-26
_citation.journal_id_CSD
_diffrn_source.pdbx_synchrotron_site
_pdbx_struct_oper_list.symmetry_operation
Japan
MEXT
25121738
N
PDBJ
Y
PDBJ
2015-10-23
REL
REL
SO4
SULFATE ION
HOH
water
SO4
3
2
SO4
SO4
201
A
SO4
1
2
SO4
SO4
201
B
SO4
4
2
SO4
SO4
202
B
SO4
2
2
SO4
SO4
201
D
SO4
5
2
SO4
SO4
202
D
HOH
61
3
HOH
HOH
301
A
HOH
8
3
HOH
HOH
302
A
HOH
60
3
HOH
HOH
303
A
HOH
67
3
HOH
HOH
304
A
HOH
1
3
HOH
HOH
305
A
HOH
14
3
HOH
HOH
306
A
HOH
9
3
HOH
HOH
307
A
HOH
58
3
HOH
HOH
308
A
HOH
15
3
HOH
HOH
309
A
HOH
10
3
HOH
HOH
310
A
HOH
4
3
HOH
HOH
311
A
HOH
72
3
HOH
HOH
312
A
HOH
2
3
HOH
HOH
313
A
HOH
69
3
HOH
HOH
314
A
HOH
3
3
HOH
HOH
315
A
HOH
21
3
HOH
HOH
316
A
HOH
20
3
HOH
HOH
317
A
HOH
19
3
HOH
HOH
318
A
HOH
11
3
HOH
HOH
319
A
HOH
17
3
HOH
HOH
320
A
HOH
68
3
HOH
HOH
321
A
HOH
62
3
HOH
HOH
322
A
HOH
70
3
HOH
HOH
323
A
HOH
22
3
HOH
HOH
324
A
HOH
24
3
HOH
HOH
325
A
HOH
73
3
HOH
HOH
326
A
HOH
18
3
HOH
HOH
327
A
HOH
7
3
HOH
HOH
328
A
HOH
16
3
HOH
HOH
329
A
HOH
59
3
HOH
HOH
330
A
HOH
6
3
HOH
HOH
331
A
HOH
86
3
HOH
HOH
332
A
HOH
5
3
HOH
HOH
301
B
HOH
52
3
HOH
HOH
302
B
HOH
65
3
HOH
HOH
303
B
HOH
47
3
HOH
HOH
304
B
HOH
82
3
HOH
HOH
305
B
HOH
13
3
HOH
HOH
306
B
HOH
87
3
HOH
HOH
307
B
HOH
57
3
HOH
HOH
308
B
HOH
45
3
HOH
HOH
309
B
HOH
49
3
HOH
HOH
310
B
HOH
48
3
HOH
HOH
311
B
HOH
85
3
HOH
HOH
312
B
HOH
44
3
HOH
HOH
313
B
HOH
53
3
HOH
HOH
314
B
HOH
12
3
HOH
HOH
315
B
HOH
84
3
HOH
HOH
316
B
HOH
46
3
HOH
HOH
317
B
HOH
51
3
HOH
HOH
318
B
HOH
54
3
HOH
HOH
319
B
HOH
55
3
HOH
HOH
320
B
HOH
83
3
HOH
HOH
321
B
HOH
66
3
HOH
HOH
322
B
HOH
56
3
HOH
HOH
323
B
HOH
50
3
HOH
HOH
324
B
HOH
35
3
HOH
HOH
201
C
HOH
32
3
HOH
HOH
202
C
HOH
27
3
HOH
HOH
203
C
HOH
33
3
HOH
HOH
204
C
HOH
31
3
HOH
HOH
205
C
HOH
30
3
HOH
HOH
206
C
HOH
37
3
HOH
HOH
207
C
HOH
75
3
HOH
HOH
208
C
HOH
23
3
HOH
HOH
209
C
HOH
26
3
HOH
HOH
210
C
HOH
80
3
HOH
HOH
211
C
HOH
63
3
HOH
HOH
212
C
HOH
28
3
HOH
HOH
213
C
HOH
89
3
HOH
HOH
214
C
HOH
34
3
HOH
HOH
215
C
HOH
79
3
HOH
HOH
216
C
HOH
76
3
HOH
HOH
217
C
HOH
71
3
HOH
HOH
218
C
HOH
36
3
HOH
HOH
219
C
HOH
77
3
HOH
HOH
220
C
HOH
64
3
HOH
HOH
221
C
HOH
78
3
HOH
HOH
222
C
HOH
88
3
HOH
HOH
223
C
HOH
39
3
HOH
HOH
224
C
HOH
29
3
HOH
HOH
225
C
HOH
74
3
HOH
HOH
301
D
HOH
81
3
HOH
HOH
302
D
HOH
90
3
HOH
HOH
303
D
HOH
43
3
HOH
HOH
304
D
HOH
41
3
HOH
HOH
305
D
HOH
25
3
HOH
HOH
306
D
HOH
40
3
HOH
HOH
307
D
HOH
38
3
HOH
HOH
308
D
HOH
42
3
HOH
HOH
309
D
GLY
30
n
1
GLY
30
A
SER
31
n
2
SER
31
A
ILE
32
n
3
ILE
32
A
SER
33
n
4
SER
33
A
PHE
34
n
5
PHE
34
A
HIS
35
n
6
HIS
35
A
LEU
36
n
7
LEU
36
A
PRO
37
n
8
PRO
37
A
VAL
38
n
9
VAL
38
A
ASN
39
n
10
ASN
39
A
SER
40
n
11
SER
40
A
ARG
41
n
12
ARG
41
A
LYS
42
n
13
LYS
42
A
CYS
43
n
14
CYS
43
A
LEU
44
n
15
LEU
44
A
ARG
45
n
16
ARG
45
A
GLU
46
n
17
GLU
46
A
GLU
47
n
18
GLU
47
A
ILE
48
n
19
ILE
48
A
HIS
49
n
20
HIS
49
A
LYS
50
n
21
LYS
50
A
ASP
51
n
22
ASP
51
A
LEU
52
n
23
LEU
52
A
LEU
53
n
24
LEU
53
A
VAL
54
n
25
VAL
54
A
THR
55
n
26
THR
55
A
GLY
56
n
27
GLY
56
A
ALA
57
n
28
ALA
57
A
TYR
58
n
29
TYR
58
A
GLU
59
n
30
GLU
59
A
ILE
60
n
31
ILE
60
A
THR
61
n
32
THR
61
A
ASP
62
n
33
ASP
62
A
GLN
63
n
34
GLN
63
A
SER
64
n
35
SER
64
A
GLY
65
n
36
GLY
65
A
GLY
66
n
37
GLY
66
A
ALA
67
n
38
ALA
67
A
GLY
68
n
39
GLY
68
A
GLY
69
n
40
GLY
69
A
LEU
70
n
41
LEU
70
A
ARG
71
n
42
ARG
71
A
THR
72
n
43
THR
72
A
HIS
73
n
44
HIS
73
A
LEU
74
n
45
LEU
74
A
LYS
75
n
46
LYS
75
A
ILE
76
n
47
ILE
76
A
THR
77
n
48
THR
77
A
ASP
78
n
49
ASP
78
A
SER
79
n
50
SER
79
A
ALA
80
n
51
ALA
80
A
GLY
81
n
52
GLY
81
A
HIS
82
n
53
HIS
82
A
ILE
83
n
54
ILE
83
A
LEU
84
n
55
LEU
84
A
TYR
85
n
56
TYR
85
A
ALA
86
n
57
ALA
86
A
LYS
87
n
58
LYS
87
A
GLU
88
n
59
GLU
88
A
ASP
89
n
60
ASP
89
A
ALA
90
n
61
ALA
90
A
THR
91
n
62
THR
91
A
LYS
92
n
63
LYS
92
A
GLY
93
n
64
GLY
93
A
LYS
94
n
65
LYS
94
A
PHE
95
n
66
PHE
95
A
ALA
96
n
67
ALA
96
A
PHE
97
n
68
PHE
97
A
THR
98
n
69
THR
98
A
THR
99
n
70
THR
99
A
GLU
100
n
71
GLU
100
A
ASP
101
n
72
ASP
101
A
TYR
102
n
73
TYR
102
A
ASP
103
n
74
ASP
103
A
MET
104
n
75
MET
104
A
PHE
105
n
76
PHE
105
A
GLU
106
n
77
GLU
106
A
VAL
107
n
78
VAL
107
A
CYS
108
n
79
CYS
108
A
PHE
109
n
80
PHE
109
A
GLU
110
n
81
GLU
110
A
SER
111
n
82
SER
111
A
LYS
112
n
83
LYS
112
A
GLY
113
n
84
GLY
113
A
THR
114
n
85
THR
114
A
GLY
115
n
86
GLY
115
A
ARG
116
n
87
ARG
116
A
ILE
117
n
88
ILE
117
A
PRO
118
n
89
PRO
118
A
ASP
119
n
90
ASP
119
A
GLN
120
n
91
GLN
120
A
LEU
121
n
92
LEU
121
A
VAL
122
n
93
VAL
122
A
ILE
123
n
94
ILE
123
A
LEU
124
n
95
LEU
124
A
ASP
125
n
96
ASP
125
A
MET
126
n
97
MET
126
A
LYS
127
n
98
LYS
127
A
HIS
128
n
99
HIS
128
A
GLY
129
n
100
GLY
129
A
n
101
130
A
n
102
131
A
n
103
132
A
GLY
30
n
1
GLY
30
B
SER
31
n
2
SER
31
B
ILE
32
n
3
ILE
32
B
SER
33
n
4
SER
33
B
PHE
34
n
5
PHE
34
B
HIS
35
n
6
HIS
35
B
LEU
36
n
7
LEU
36
B
PRO
37
n
8
PRO
37
B
VAL
38
n
9
VAL
38
B
ASN
39
n
10
ASN
39
B
SER
40
n
11
SER
40
B
ARG
41
n
12
ARG
41
B
LYS
42
n
13
LYS
42
B
CYS
43
n
14
CYS
43
B
LEU
44
n
15
LEU
44
B
ARG
45
n
16
ARG
45
B
GLU
46
n
17
GLU
46
B
GLU
47
n
18
GLU
47
B
ILE
48
n
19
ILE
48
B
HIS
49
n
20
HIS
49
B
LYS
50
n
21
LYS
50
B
ASP
51
n
22
ASP
51
B
LEU
52
n
23
LEU
52
B
LEU
53
n
24
LEU
53
B
VAL
54
n
25
VAL
54
B
THR
55
n
26
THR
55
B
GLY
56
n
27
GLY
56
B
ALA
57
n
28
ALA
57
B
TYR
58
n
29
TYR
58
B
GLU
59
n
30
GLU
59
B
ILE
60
n
31
ILE
60
B
THR
61
n
32
THR
61
B
ASP
62
n
33
ASP
62
B
GLN
63
n
34
GLN
63
B
SER
64
n
35
SER
64
B
GLY
65
n
36
GLY
65
B
GLY
66
n
37
GLY
66
B
ALA
67
n
38
ALA
67
B
GLY
68
n
39
GLY
68
B
GLY
69
n
40
GLY
69
B
LEU
70
n
41
LEU
70
B
ARG
71
n
42
ARG
71
B
THR
72
n
43
THR
72
B
HIS
73
n
44
HIS
73
B
LEU
74
n
45
LEU
74
B
LYS
75
n
46
LYS
75
B
ILE
76
n
47
ILE
76
B
THR
77
n
48
THR
77
B
ASP
78
n
49
ASP
78
B
SER
79
n
50
SER
79
B
ALA
80
n
51
ALA
80
B
GLY
81
n
52
GLY
81
B
HIS
82
n
53
HIS
82
B
ILE
83
n
54
ILE
83
B
LEU
84
n
55
LEU
84
B
TYR
85
n
56
TYR
85
B
ALA
86
n
57
ALA
86
B
LYS
87
n
58
LYS
87
B
GLU
88
n
59
GLU
88
B
ASP
89
n
60
ASP
89
B
ALA
90
n
61
ALA
90
B
THR
91
n
62
THR
91
B
LYS
92
n
63
LYS
92
B
GLY
93
n
64
GLY
93
B
LYS
94
n
65
LYS
94
B
PHE
95
n
66
PHE
95
B
ALA
96
n
67
ALA
96
B
PHE
97
n
68
PHE
97
B
THR
98
n
69
THR
98
B
THR
99
n
70
THR
99
B
GLU
100
n
71
GLU
100
B
ASP
101
n
72
ASP
101
B
TYR
102
n
73
TYR
102
B
ASP
103
n
74
ASP
103
B
MET
104
n
75
MET
104
B
PHE
105
n
76
PHE
105
B
GLU
106
n
77
GLU
106
B
VAL
107
n
78
VAL
107
B
CYS
108
n
79
CYS
108
B
PHE
109
n
80
PHE
109
B
GLU
110
n
81
GLU
110
B
SER
111
n
82
SER
111
B
LYS
112
n
83
LYS
112
B
GLY
113
n
84
GLY
113
B
THR
114
n
85
THR
114
B
GLY
115
n
86
GLY
115
B
ARG
116
n
87
ARG
116
B
ILE
117
n
88
ILE
117
B
PRO
118
n
89
PRO
118
B
ASP
119
n
90
ASP
119
B
GLN
120
n
91
GLN
120
B
LEU
121
n
92
LEU
121
B
VAL
122
n
93
VAL
122
B
ILE
123
n
94
ILE
123
B
LEU
124
n
95
LEU
124
B
ASP
125
n
96
ASP
125
B
MET
126
n
97
MET
126
B
LYS
127
n
98
LYS
127
B
HIS
128
n
99
HIS
128
B
n
100
129
B
n
101
130
B
n
102
131
B
n
103
132
B
GLY
30
n
1
GLY
30
C
SER
31
n
2
SER
31
C
ILE
32
n
3
ILE
32
C
SER
33
n
4
SER
33
C
PHE
34
n
5
PHE
34
C
HIS
35
n
6
HIS
35
C
LEU
36
n
7
LEU
36
C
PRO
37
n
8
PRO
37
C
VAL
38
n
9
VAL
38
C
ASN
39
n
10
ASN
39
C
SER
40
n
11
SER
40
C
ARG
41
n
12
ARG
41
C
LYS
42
n
13
LYS
42
C
CYS
43
n
14
CYS
43
C
LEU
44
n
15
LEU
44
C
ARG
45
n
16
ARG
45
C
GLU
46
n
17
GLU
46
C
GLU
47
n
18
GLU
47
C
ILE
48
n
19
ILE
48
C
HIS
49
n
20
HIS
49
C
LYS
50
n
21
LYS
50
C
ASP
51
n
22
ASP
51
C
LEU
52
n
23
LEU
52
C
LEU
53
n
24
LEU
53
C
VAL
54
n
25
VAL
54
C
THR
55
n
26
THR
55
C
GLY
56
n
27
GLY
56
C
ALA
57
n
28
ALA
57
C
TYR
58
n
29
TYR
58
C
GLU
59
n
30
GLU
59
C
ILE
60
n
31
ILE
60
C
THR
61
n
32
THR
61
C
ASP
62
n
33
ASP
62
C
GLN
63
n
34
GLN
63
C
SER
64
n
35
SER
64
C
GLY
65
n
36
GLY
65
C
GLY
66
n
37
GLY
66
C
ALA
67
n
38
ALA
67
C
GLY
68
n
39
GLY
68
C
GLY
69
n
40
GLY
69
C
LEU
70
n
41
LEU
70
C
ARG
71
n
42
ARG
71
C
THR
72
n
43
THR
72
C
HIS
73
n
44
HIS
73
C
LEU
74
n
45
LEU
74
C
LYS
75
n
46
LYS
75
C
ILE
76
n
47
ILE
76
C
THR
77
n
48
THR
77
C
ASP
78
n
49
ASP
78
C
SER
79
n
50
SER
79
C
ALA
80
n
51
ALA
80
C
GLY
81
n
52
GLY
81
C
HIS
82
n
53
HIS
82
C
ILE
83
n
54
ILE
83
C
LEU
84
n
55
LEU
84
C
TYR
85
n
56
TYR
85
C
ALA
86
n
57
ALA
86
C
LYS
87
n
58
LYS
87
C
GLU
88
n
59
GLU
88
C
ASP
89
n
60
ASP
89
C
ALA
90
n
61
ALA
90
C
THR
91
n
62
THR
91
C
LYS
92
n
63
LYS
92
C
GLY
93
n
64
GLY
93
C
LYS
94
n
65
LYS
94
C
PHE
95
n
66
PHE
95
C
ALA
96
n
67
ALA
96
C
PHE
97
n
68
PHE
97
C
THR
98
n
69
THR
98
C
THR
99
n
70
THR
99
C
GLU
100
n
71
GLU
100
C
ASP
101
n
72
ASP
101
C
TYR
102
n
73
TYR
102
C
ASP
103
n
74
ASP
103
C
MET
104
n
75
MET
104
C
PHE
105
n
76
PHE
105
C
GLU
106
n
77
GLU
106
C
VAL
107
n
78
VAL
107
C
CYS
108
n
79
CYS
108
C
PHE
109
n
80
PHE
109
C
GLU
110
n
81
GLU
110
C
SER
111
n
82
SER
111
C
LYS
112
n
83
LYS
112
C
GLY
113
n
84
GLY
113
C
THR
114
n
85
THR
114
C
GLY
115
n
86
GLY
115
C
ARG
116
n
87
ARG
116
C
ILE
117
n
88
ILE
117
C
PRO
118
n
89
PRO
118
C
ASP
119
n
90
ASP
119
C
GLN
120
n
91
GLN
120
C
LEU
121
n
92
LEU
121
C
VAL
122
n
93
VAL
122
C
ILE
123
n
94
ILE
123
C
LEU
124
n
95
LEU
124
C
ASP
125
n
96
ASP
125
C
MET
126
n
97
MET
126
C
LYS
127
n
98
LYS
127
C
HIS
128
n
99
HIS
128
C
GLY
129
n
100
GLY
129
C
n
101
130
C
n
102
131
C
n
103
132
C
GLY
30
n
1
GLY
30
D
SER
31
n
2
SER
31
D
ILE
32
n
3
ILE
32
D
SER
33
n
4
SER
33
D
PHE
34
n
5
PHE
34
D
HIS
35
n
6
HIS
35
D
LEU
36
n
7
LEU
36
D
PRO
37
n
8
PRO
37
D
VAL
38
n
9
VAL
38
D
ASN
39
n
10
ASN
39
D
SER
40
n
11
SER
40
D
ARG
41
n
12
ARG
41
D
LYS
42
n
13
LYS
42
D
CYS
43
n
14
CYS
43
D
LEU
44
n
15
LEU
44
D
ARG
45
n
16
ARG
45
D
GLU
46
n
17
GLU
46
D
GLU
47
n
18
GLU
47
D
ILE
48
n
19
ILE
48
D
HIS
49
n
20
HIS
49
D
n
21
50
D
ASP
51
n
22
ASP
51
D
LEU
52
n
23
LEU
52
D
LEU
53
n
24
LEU
53
D
VAL
54
n
25
VAL
54
D
THR
55
n
26
THR
55
D
GLY
56
n
27
GLY
56
D
ALA
57
n
28
ALA
57
D
TYR
58
n
29
TYR
58
D
GLU
59
n
30
GLU
59
D
ILE
60
n
31
ILE
60
D
THR
61
n
32
THR
61
D
ASP
62
n
33
ASP
62
D
GLN
63
n
34
GLN
63
D
SER
64
n
35
SER
64
D
GLY
65
n
36
GLY
65
D
GLY
66
n
37
GLY
66
D
ALA
67
n
38
ALA
67
D
GLY
68
n
39
GLY
68
D
GLY
69
n
40
GLY
69
D
LEU
70
n
41
LEU
70
D
ARG
71
n
42
ARG
71
D
THR
72
n
43
THR
72
D
HIS
73
n
44
HIS
73
D
LEU
74
n
45
LEU
74
D
LYS
75
n
46
LYS
75
D
ILE
76
n
47
ILE
76
D
THR
77
n
48
THR
77
D
ASP
78
n
49
ASP
78
D
n
50
79
D
n
51
80
D
GLY
81
n
52
GLY
81
D
HIS
82
n
53
HIS
82
D
ILE
83
n
54
ILE
83
D
LEU
84
n
55
LEU
84
D
TYR
85
n
56
TYR
85
D
ALA
86
n
57
ALA
86
D
LYS
87
n
58
LYS
87
D
GLU
88
n
59
GLU
88
D
ASP
89
n
60
ASP
89
D
ALA
90
n
61
ALA
90
D
THR
91
n
62
THR
91
D
LYS
92
n
63
LYS
92
D
GLY
93
n
64
GLY
93
D
LYS
94
n
65
LYS
94
D
PHE
95
n
66
PHE
95
D
ALA
96
n
67
ALA
96
D
PHE
97
n
68
PHE
97
D
THR
98
n
69
THR
98
D
THR
99
n
70
THR
99
D
n
71
100
D
n
72
101
D
n
73
102
D
n
74
103
D
n
75
104
D
PHE
105
n
76
PHE
105
D
GLU
106
n
77
GLU
106
D
VAL
107
n
78
VAL
107
D
CYS
108
n
79
CYS
108
D
PHE
109
n
80
PHE
109
D
GLU
110
n
81
GLU
110
D
SER
111
n
82
SER
111
D
LYS
112
n
83
LYS
112
D
GLY
113
n
84
GLY
113
D
THR
114
n
85
THR
114
D
GLY
115
n
86
GLY
115
D
n
87
116
D
ILE
117
n
88
ILE
117
D
PRO
118
n
89
PRO
118
D
ASP
119
n
90
ASP
119
D
GLN
120
n
91
GLN
120
D
LEU
121
n
92
LEU
121
D
VAL
122
n
93
VAL
122
D
ILE
123
n
94
ILE
123
D
LEU
124
n
95
LEU
124
D
ASP
125
n
96
ASP
125
D
MET
126
n
97
MET
126
D
LYS
127
n
98
LYS
127
D
HIS
128
n
99
HIS
128
D
GLY
129
n
100
GLY
129
D
n
101
130
D
n
102
131
D
n
103
132
D
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
97
A
O
PHE
68
A
N
VAL
54
A
N
VAL
25
A
N
THR
61
A
N
THR
32
A
O
LEU
121
A
O
LEU
92
A
O
VAL
122
A
O
VAL
93
A
N
PHE
34
A
N
PHE
5
A
N
SER
31
A
N
SER
2
B
O
SER
33
B
O
SER
4
B
N
ILE
32
B
N
ILE
3
B
O
LEU
124
B
O
LEU
95
B
O
LEU
121
B
O
LEU
92
B
N
THR
61
B
N
THR
32
B
N
VAL
54
B
N
VAL
25
B
O
PHE
97
B
O
PHE
68
A
O
TYR
85
A
O
TYR
56
A
N
ILE
76
A
N
ILE
47
A
N
HIS
73
A
N
HIS
44
A
O
GLU
110
A
O
GLU
81
A
O
PHE
105
A
O
PHE
76
A
N
GLU
46
A
N
GLU
17
A
N
CYS
43
A
N
CYS
14
B
O
ARG
45
B
O
ARG
16
B
N
GLU
46
B
N
GLU
17
B
O
PHE
105
B
O
PHE
76
B
O
GLU
110
B
O
GLU
81
B
N
HIS
73
B
N
HIS
44
B
N
ILE
76
B
N
ILE
47
B
O
LEU
84
B
O
LEU
55
C
O
PHE
97
C
O
PHE
68
C
N
VAL
54
C
N
VAL
25
C
N
THR
61
C
N
THR
32
C
O
LEU
121
C
O
LEU
92
C
O
LEU
124
C
O
LEU
95
C
N
ILE
32
C
N
ILE
3
C
N
SER
31
C
N
SER
2
D
O
SER
33
D
O
SER
4
D
N
PHE
34
D
N
PHE
5
D
O
VAL
122
D
O
VAL
93
D
O
LEU
121
D
O
LEU
92
D
N
THR
61
D
N
THR
32
D
N
VAL
54
D
N
VAL
25
D
O
PHE
97
D
O
PHE
68
C
O
TYR
85
C
O
TYR
56
C
N
ILE
76
C
N
ILE
47
C
N
HIS
73
C
N
HIS
44
C
O
GLU
110
C
O
GLU
81
C
O
VAL
107
C
O
VAL
78
C
N
LEU
44
C
N
LEU
15
C
N
ARG
45
C
N
ARG
16
D
O
CYS
43
D
O
CYS
14
D
N
LEU
44
D
N
LEU
15
D
O
VAL
107
D
O
VAL
78
D
O
GLU
110
D
O
GLU
81
D
N
HIS
73
D
N
HIS
44
D
N
ILE
76
D
N
ILE
47
D
O
TYR
85
D
O
TYR
56
1
A
VAL
130
A
VAL
101
1
Y
1
A
GLU
131
A
GLU
102
1
Y
1
A
ALA
132
A
ALA
103
1
Y
1
B
GLY
129
B
GLY
100
1
Y
1
B
VAL
130
B
VAL
101
1
Y
1
B
GLU
131
B
GLU
102
1
Y
1
B
ALA
132
B
ALA
103
1
Y
1
C
VAL
130
C
VAL
101
1
Y
1
C
GLU
131
C
GLU
102
1
Y
1
C
ALA
132
C
ALA
103
1
Y
1
D
LYS
50
D
LYS
21
1
Y
1
D
SER
79
D
SER
50
1
Y
1
D
ALA
80
D
ALA
51
1
Y
1
D
GLU
100
D
GLU
71
1
Y
1
D
ASP
101
D
ASP
72
1
Y
1
D
TYR
102
D
TYR
73
1
Y
1
D
ASP
103
D
ASP
74
1
Y
1
D
MET
104
D
MET
75
1
Y
1
D
ARG
116
D
ARG
87
1
Y
1
D
VAL
130
D
VAL
101
1
Y
1
D
GLU
131
D
GLU
102
1
Y
1
D
ALA
132
D
ALA
103
1
Y
1
A
THR
91
-130.59
-75.19
1
A
ASP
101
37.36
-109.53
1
B
THR
91
-128.34
-74.67
1
C
THR
91
-130.64
-74.34
1
C
ASP
101
82.69
-33.95
1
D
THR
91
-128.10
-73.05
0.2493
0.2296
0.2306
1.580
33.720
2841
56063
5.07
99.44
0.18
Random selection
1
FREE R-VALUE
1.36
SAD
24.62
0.90
1.11
ML
FLAT BULK SOLVENT MODEL
1.580
33.720
90
3131
25
0
3016
0.007
3098
0.862
4162
11.938
1830
0.061
460
0.004
527
0.2840
0.2462
1.6072
104
2668
100.00
0.2850
0.2486
1.6365
145
2628
100.00
0.2687
0.2439
1.6679
150
2652
100.00
0.3108
0.2352
1.7020
155
2637
100.00
0.2410
0.2399
1.7390
134
2634
100.00
0.2573
0.2395
1.7794
141
2639
100.00
0.3100
0.2402
1.8239
133
2647
100.00
0.2766
0.2397
1.8732
157
2647
100.00
0.2498
0.2266
1.9284
133
2627
100.00
0.2391
0.2301
1.9906
156
2669
100.00
0.2338
0.2253
2.0617
138
2678
100.00
0.2461
0.2249
2.1443
149
2662
100.00
0.2782
0.2281
2.2418
136
2647
100.00
0.2666
0.2405
2.3600
166
2660
100.00
0.2767
0.2438
2.5078
152
2659
100.00
0.2612
0.2475
2.7014
137
2688
100.00
0.3069
0.2488
2.9731
124
2748
100.00
0.2315
0.2278
3.4029
127
2719
100.00
0.2045
0.2010
4.2860
158
2691
99.00
0.2315
0.2254
33.7280
146
2622
91.00
1.58
100
5AZX
56232
0.057
1
78.7
7.1
99.4
0.459
1.58
1.61
6.3
1
7.1
100
refinement
PHENIX
(1.10_2155: ???)
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHENIX
Transmembrane emp24 domain-containing protein 10
Crystal structure of p24delta1 GOLD domain (native 1)
1
N
N
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
A
GLY
66
A
GLY
37
HELX_P
A
LEU
70
A
LEU
41
5
AA1
5
B
GLY
66
B
GLY
37
HELX_P
B
LEU
70
B
LEU
41
5
AA2
5
C
GLY
66
C
GLY
37
HELX_P
C
LEU
70
C
LEU
41
5
AA3
5
disulf
2.094
A
CYS
43
A
SG
CYS
14
1_555
A
CYS
108
A
SG
CYS
79
1_555
disulf
2.091
B
CYS
43
B
SG
CYS
14
1_555
B
CYS
108
B
SG
CYS
79
1_555
disulf
2.061
C
CYS
43
C
SG
CYS
14
1_555
C
CYS
108
C
SG
CYS
79
1_555
disulf
2.060
D
CYS
43
D
SG
CYS
14
1_555
D
CYS
108
D
SG
CYS
79
1_555
PROTEIN TRANSPORT
Protein transport, GPI-anchored protein, p24 complex
TMEDA_RAT
UNP
1
32
Q63584
ISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFES
KGTGRIPDQLVILDMKHGVEA
32
132
5AZX
32
132
Q63584
A
1
3
103
32
132
5AZX
32
132
Q63584
B
1
3
103
32
132
5AZX
32
132
Q63584
C
1
3
103
32
132
5AZX
32
132
Q63584
D
1
3
103
1
expression tag
GLY
30
5AZX
A
Q63584
UNP
1
1
expression tag
SER
31
5AZX
A
Q63584
UNP
2
2
expression tag
GLY
30
5AZX
B
Q63584
UNP
1
2
expression tag
SER
31
5AZX
B
Q63584
UNP
2
3
expression tag
GLY
30
5AZX
C
Q63584
UNP
1
3
expression tag
SER
31
5AZX
C
Q63584
UNP
2
4
expression tag
GLY
30
5AZX
D
Q63584
UNP
1
4
expression tag
SER
31
5AZX
D
Q63584
UNP
2
8
8
8
8
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
92
A
LYS
63
A
THR
98
A
THR
69
A
LEU
53
A
LEU
24
A
THR
61
A
THR
32
A
GLN
120
A
GLN
91
A
HIS
128
A
HIS
99
A
SER
31
A
SER
2
A
LEU
36
A
LEU
7
B
SER
31
B
SER
2
B
LEU
36
B
LEU
7
B
GLN
120
B
GLN
91
B
LYS
127
B
LYS
98
B
LEU
52
B
LEU
23
B
THR
61
B
THR
32
B
LYS
92
B
LYS
63
B
THR
99
B
THR
70
A
ILE
83
A
ILE
54
A
LYS
87
A
LYS
58
A
ARG
71
A
ARG
42
A
ASP
78
A
ASP
49
A
MET
104
A
MET
75
A
LYS
112
A
LYS
83
A
ARG
41
A
ARG
12
A
GLU
47
A
GLU
18
B
ARG
41
B
ARG
12
B
GLU
47
B
GLU
18
B
PHE
105
B
PHE
76
B
LYS
112
B
LYS
83
B
ARG
71
B
ARG
42
B
ASP
78
B
ASP
49
B
ILE
83
B
ILE
54
B
LYS
87
B
LYS
58
C
LYS
92
C
LYS
63
C
THR
98
C
THR
69
C
LEU
53
C
LEU
24
C
THR
61
C
THR
32
C
GLN
120
C
GLN
91
C
HIS
128
C
HIS
99
C
SER
31
C
SER
2
C
LEU
36
C
LEU
7
D
SER
31
D
SER
2
D
LEU
36
D
LEU
7
D
GLN
120
D
GLN
91
D
HIS
128
D
HIS
99
D
LEU
53
D
LEU
24
D
THR
61
D
THR
32
D
LYS
92
D
LYS
63
D
THR
98
D
THR
69
C
ILE
83
C
ILE
54
C
LYS
87
C
LYS
58
C
ARG
71
C
ARG
42
C
ASP
78
C
ASP
49
C
MET
104
C
MET
75
C
LYS
112
C
LYS
83
C
ARG
41
C
ARG
12
C
GLU
47
C
GLU
18
D
ARG
41
D
ARG
12
D
GLU
47
D
GLU
18
D
GLU
106
D
GLU
77
D
LYS
112
D
LYS
83
D
ARG
71
D
ARG
42
D
THR
77
D
THR
48
D
ILE
83
D
ILE
54
D
LYS
87
D
LYS
58
binding site for residue SO4 A 201
A
SO4
201
Software
6
binding site for residue SO4 B 201
B
SO4
201
Software
7
binding site for residue SO4 B 202
B
SO4
202
Software
2
binding site for residue SO4 D 201
D
SO4
201
Software
7
binding site for residue SO4 D 202
D
SO4
202
Software
3
A
GLY
30
A
GLY
1
6
1_555
A
MET
126
A
MET
97
6
1_555
A
HIS
128
A
HIS
99
6
1_555
A
HOH
305
J
HOH
6
1_555
B
HIS
35
B
HIS
6
6
1_555
B
LYS
42
B
LYS
13
6
1_555
A
PHE
34
A
PHE
5
7
1_555
A
HIS
35
A
HIS
6
7
1_555
A
LYS
42
A
LYS
13
7
1_555
B
GLY
30
B
GLY
1
7
1_555
B
MET
126
B
MET
97
7
1_555
B
HIS
128
B
HIS
99
7
1_555
B
HOH
301
K
HOH
7
1_555
B
ARG
71
B
ARG
42
2
1_555
B
HIS
73
B
HIS
44
2
1_555
C
PHE
34
C
PHE
5
7
1_555
C
HIS
35
C
HIS
6
7
1_555
C
LYS
42
C
LYS
13
7
1_555
D
GLY
30
D
GLY
1
7
1_555
D
MET
126
D
MET
97
7
1_555
D
HIS
128
D
HIS
99
7
1_555
D
HOH
301
M
HOH
7
1_555
D
ARG
71
D
ARG
42
3
1_555
D
HIS
73
D
HIS
44
3
1_555
D
LYS
112
D
LYS
83
3
1_555
19
P 21 21 21